prot_S-firma_M_contig893.19830.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_M_contig893.19830.1
Unique Nameprot_S-firma_M_contig893.19830.1
Typepolypeptide
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length996
Homology
BLAST of mRNA_S-firma_M_contig893.19830.1 vs. uniprot
Match: D8LFM1_ECTSI (Rab3 GTPase-activating protein catalytic subunit n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFM1_ECTSI)

HSP 1 Score: 546 bits (1408), Expect = 4.210e-169
Identity = 474/1205 (39.34%), Postives = 543/1205 (45.06%), Query Frame = 0
Query:    1 MSLLWMSFVRDVRLLWEDGAVLARMGPIPEVDGTSMFDRSAGCTGQDRSVASQLRGNRQAYAG-VGGADSGARVAGSGRGRQDRSLTLYPDTRMCLIWQKLQMLNCCRAGVAAQAELR---PSPSSXXXXXXXXXXXXXXXXXX----EGFYDTQEYYQTSEDE--AGEVGGGSGDGR--------------PDGDVPGGAREGLGDLG-------------------GSERXXXXXXXXXXXXXXXXXXXXXXXXXXXRARGD-------C-DGPENDA-----------DALGGKVLQHQPGEITP---------------------------------------------VPAPGTESPATTTTAAVSTTAKLPLVQVRQKEGPEVESPSAAEAVEAALPAPSSPXXXXXXXXXXXXTEENVEEPSLSAPISAGAIDQHAAVSVRATPEDSLEEDRAGAS-------------SEHATGKEEEEQIRTAA------------------------APGGQEPLTSPRHEHEVXXXXXXXXXXXXXGPCTSDEAASSSPAGSAQEPPPLQGEEISGPVAVAA----TCTAENAPPAAA-----------------------------------------------VAPESASSGGPTAEHPASADNA----PAATAAGEAPADVSGEEP-PPPMSRLLCTGAAVRNPRLQDSGPVTGDMLEQQTLGHASTYRGREVLLADMKAFRMENGRGVDGGGGGAAVFADFVRWYRPECWQSTAPADDWVGPSEDRMGGAKDDDKRLAWPGQGQILWKSPLVSHP-----RSDEPGVSPTSSPSAGPLAQSAP--PSMVTLAGWLSCWGDAGAA--AEEEREVAGGRALQPALLFRDVKEGEKALHFLETISPGSLLVQLLSGLLGLSVFVLEEGCSGAGSIPGVQARSIQSRKRKVVEAVELLADASMSVSTSTXXXXXAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVGSNNGDCGPTENSTEGSSLSPFRAALLSADGACVAVKKAESALARAVSLQRSLPGQKDLVDAIVGAC-NEAGGGAGEARVPARSQKEFLRDLLLAQGIQKTPGSELDELLASYDEEHRQEGLKDGGGVDIGSGXXXXXXPPPRTKEYVLRCQTPAPFCSRNVGRGQMDAYPTPPSRMYAKTDGKNLRVALSLCESEI 995
            MSLLWMSFVRDVRLLWEDGA +ARM PI  VDGTSMFDR A CTGQDRSVASQLRG+ QA  G V  +D G+   GS     DRSL  YPDTR CLIWQKLQMLNCCRA   AQ  L+   P PS                       E F+DT+EYYQTSEDE  +G  GGG  D R               D DV   A  G G++G                   G  R                            A GD       C +G   DA           +    +VL  +  EITP                                             +    T SP  TTT   ++    PL    ++        S     E A P  SSP                  E ++  P      ++  A  V AT ++++  D  G +              E   G ++EE+++  A                         P    P+ +     EV               C      SSSPA   +E P      ++    V +    TC +  A   AA                                                 PE  ++       P ++D A     AA  A    A   GEEP  PPM RLLC+GAAVR PRLQ+ GPVT DML QQTLG A+ YRGREVLLADM AFR ENG    GG G AAVFADFVRWYRPECWQ      +WV  SE R+GG  +DDKRLAWPGQGQ++W+S +         R + P  +     S G      P  PS  TLAGWLSCWG AGAA  AE               LF  V EGEKALHFLETISPG LLVQLLS LLGLSVFVLEE C GA S+P V+A                      SV T+                                                             R ALL+ADGACVAVK+AE+AL+RAVSLQRSLPG+KDLV+ +V AC +E   G GE  V AR  KEFLRDLLLAQGIQKTPGSELDELLASYDEEHR               XXXXXX    TKEYVLRCQTPAPF SRNVGRGQM+AYPTPPSRMYAKTDG NLRVALSLCES+I
Sbjct:  539 MSLLWMSFVRDVRLLWEDGATIARMSPIAAVDGTSMFDRGASCTGQDRSVASQLRGSSQADGGSVDVSDDGSGGDGSLPPWSDRSLVPYPDTRTCLIWQKLQMLNCCRAEGGAQMGLQLSSPPPSQDVGDGTADQGEGEKGPGDDEDEEAFFDTREYYQTSEDEGSSGGTGGGLQDDRCSAGDVDRGGERSAEDDDVLASADRGTGEVGTGGGVRDEHGGDRDADDSAGGVRAEPGAGEDYEGVISAATSGDSNSAAESDAVGDRAGDLSGCNEGLPKDASENRPQQQQRGEGSSAQVLDDETAEITPASTAAATAVDLSKLGAGREELGVTGRAVTVVEGGDDRRSSSSTGGIDGEETVSPGDTTTETAASPIAPPLSAGTEEVAVVPSLASRLGEGEPASPTSSSPVPSLGDDANEALPCAVATETTMIGP-----EEEDVATIVAATSDEAMSVDEGGDNPTTQNMPEAEREEGEKEVGGKDEEELQQGADSPSXXXXXXXXXXXXXXXXEPSSPPSSPPPMETGARTDEVPRNGSADDGSDGLA-CKDTPPPSSSPANPEEETPDTTKSSLAAAGEVISDDRSTCPSPKASTMAAGEAISEISXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTISEALPEKRTAIIAMENSPDASDKAFGCPEAAPTAATGSAAAVGEEPLVPPMRRLLCSGAAVRPPRLQECGPVTEDMLRQQTLGQAAAYRGREVLLADMTAFRSENG----GGDGDAAVFADFVRWYRPECWQEATADGEWVSASEGRLGGRAEDDKRLAWPGQGQVVWRSAVTGRQVHGQNRDEAPEAAAADELSPGDHLGLPPALPSPFTLAGWLSCWGQAGAAVRAEXXXXXXXXXXXXXXXLFSGVTEGEKALHFLETISPGPLLVQLLSALLGLSVFVLEEACLGADSLPSVEA----------------------SVDTA-------------------------------------------------------------RTALLAADGACVAVKRAETALSRAVSLQRSLPGKKDLVNDMVAACGDEEEKGGGEVPVSARPHKEFLRDLLLAQGIQKTPGSELDELLASYDEEHRXXXXX----XXXXXXXXXXXXXXXETKEYVLRCQTPAPFYSRNVGRGQMEAYPTPPSRMYAKTDGSNLRVALSLCESDI 1646          
BLAST of mRNA_S-firma_M_contig893.19830.1 vs. uniprot
Match: A0A6H5JCY7_9PHAE (Rab3 GTPase-activating protein catalytic subunit n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCY7_9PHAE)

HSP 1 Score: 475 bits (1222), Expect = 4.500e-142
Identity = 473/1146 (41.27%), Postives = 560/1146 (48.87%), Query Frame = 0
Query:    1 MSLLWMSFVRDVRLLWEDGAVLARMGPIPEVDGTSMFDRSAGCTGQDRSVASQLRGNRQAYAG-VGGADSGARVAGSGRGRQDRSLTLYPDTRMCLIWQKLQMLNCCRAGVAAQAELRPSP------SSXXXXXXXXXXXXXXXXXXEGFYDTQEYYQTSEDE--AGEVGGG-------SGD----------------------GRPDGDVPGGAREGL-GDLGGSERXXXXXXXXXXXXXXXXXXXXXXXXXXXRARGDCDGPENDADALGG-------------------------KVLQHQPGEITPVPAPGTESPATTTTAAVSTTAKLPLVQVRQKE----GPEVESPSAAEAVEAALPAPSSPXXXXXXXXXXXXTEENVEEPSLSAPISAGAIDQHAAVSVRA-------------TPEDSLEEDRAGASSEHATG----------KEEEEQIRTAAAP----------GGQEPLT-----SPRHEHEVXXXXXXXXXXXXXGPCTSDEAASSS---------------------PAGSAQEPPPLQ-------------GEEISGPVAVAATCTAENAPPAAAVAPESASSGGPTAEHPASA---------------------------------------------------DNAPAA------------TAAGEAPADVSGEEPPPPMSRLLCTGAAVRNPRLQDSGPVTGDMLEQQTLGHASTYRGREVLLADMKAFRMENGRGVDGGGGGAAVFADFVRWYRPECWQSTAPADDWVGPSEDRMGGAKDDDKRLAWPGQGQILWKSPLVSHPRSDEPGVSPTSSPSAGPLAQSAP----------PSMVTLAGWLSCWGDAGAAAEEEREVAGGRALQPAL--LFRDVKEGEKALHFLETISPGSLLVQLLSGLLGLSVFVLEEGCSGAGSIPGVQARSIQSRKRKVVEAVELLADASMSVSTSTXXXXXA------------------EXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVGSNNGDCGPT--ENSTEGSSLSPFRAALLSADGACVAVKKAESALARAVSLQRSLPGQKDLVDAIVGAC-NEAGGGAGEARVPARSQKEFLRDLLLAQGIQKTPGSELDELLAS 910
            MSLLWMSFVRDVRLLWEDGA +ARM PI  VDGTSMFD SA CTGQDRSVASQLRG+RQA  G   G+D  +   GS     D SL LYPDTR CLIWQKLQMLNCCRA  A Q +L+PSP                          E F+DT+EYYQTSEDE  +G++GGG       +GD                      G  +G   GG ++G  GD    ++        XXXXXXXXX           A  + D   + AD L G                          VL  +  EITP P             A +T   L  + V ++E    G  +      +            XXXXXX      T E V  P ++ P+SAG  D+ AAV   A             +P  S      G  +  A            + EEE + TA A           GG  P T     + R E E XXXXXX            +E                          P+     PPP++             G++ S   A     + +  PP+++  PE    G   A   A+                                                    DN+P A            TAA  + A V      PPM RLLC+GAAVR PRLQ+SGPVT DML+QQTLG A  YRGREVLLADM AFR EN    DGG   AAVFADFVRWYRPECWQ T    +WV  SE R+GG  +DDKRLAWPGQGQ++WK  +  H      G +   +P A    + +P          PS   LAGWLS WG AGAA + E+E             LF  V EGEKALHFLETISPG LLVQLLS LLGLSVF+LEE C GAGS+P V   S+ + +RKVVEAVELL+ AS + +    XXXX                   +       XXXXXXXXXXXXXXXXXXXXXX + ++         E+S + SSLSPFR ALL+ADGACVAVK+AE+AL+RAVSLQRSLPG++DLV+ +V AC +E   G GE  V AR  KEFLRDLLLAQGIQKTPGSELDELLAS
Sbjct:  558 MSLLWMSFVRDVRLLWEDGATIARMNPITAVDGTSMFDWSASCTGQDRSVASQLRGSRQADGGGADGSDDSSGRDGSLPPWSDHSLVLYPDTRTCLIWQKLQMLNCCRAEGAPQVDLQPSPPPSQDVGDGAADQGGGEKGPGDDEDEEAFFDTREYYQTSEDEGSSGDIGGGLQDDQCGAGDVGRGGECGAEDDARGVVAASISGAGEGGTVGGVQDGHDGDRDADDKAGGVHAEPXXXXXXXXXLSAATSGDGNSAA-ESDAVGDHADGLSGCNEDLPKDASENHPQQQQRDEGSSAPVLDDETAEITPAP------------TAAATAVDLSKIGVGREELGVAGVAIAIVEDGDDRSGXXXXXXXXXXXXXXIISSGDTAETVASP-IAPPLSAGT-DEVAAVPALAPATATQLREGEPASPTSSXXXXXLGDDANEALPCAVATKKTMIRPEEEDVATAVAATPDEAMSVNEGGDNPTTQNMLKAEREEGEKXXXXXXEEELQQRVDSPFEEXXXXXXXXXXXXXXXXXXXXXXXXXXPSSPPSSPPPMETGARTVEVPRNGDGDDCSDGFA-----SEDTPPPSSSANPEEEMPGTAKASLAAAGEVVSDRYTCASPKASIXXXXXXXXXXXXXXXXXXXXXXXXSPEKQTAIIAMDNSPEALDNALGRPEVAPTAASGSTAAVGDGPLVPPMRRLLCSGAAVRPPRLQESGPVTEDMLKQQTLGQAPAYRGREVLLADMTAFRAEN----DGGDRDAAVFADFVRWYRPECWQETTADGEWVSASEGRLGGRAEDDKRLAWPGQGQVVWKPSVTGHQGQ---GQNWDETPEADAADELSPGDHLGLPPALPSPFKLAGWLSYWGQAGAAVQAEKEXXXXXXXXXXXXPLFSGVTEGEKALHFLETISPGPLLVQLLSALLGLSVFILEEACLGAGSLPSV---SVDTARRKVVEAVELLSSASTTATHDDAXXXXXXXXXXXXXXXXXLLEGRRDNGCSGGAXXXXXXXXXXXXXXXXXXXXXXXISASLETAAEVSRESSRDRSSLSPFRTALLAADGACVAVKRAETALSRAVSLQRSLPGKRDLVNDMVAACGDEEEKGGGEVLVSARPHKEFLRDLLLAQGIQKTPGSELDELLAS 1673          
BLAST of mRNA_S-firma_M_contig893.19830.1 vs. uniprot
Match: UPI0018AE5351 (rab3 GTPase-activating protein catalytic subunit isoform X1 n=4 Tax=Dioscorea cayennensis subsp. rotundata TaxID=55577 RepID=UPI0018AE5351)

HSP 1 Score: 72.4 bits (176), Expect = 3.870e-9
Identity = 63/235 (26.81%), Postives = 95/235 (40.43%), Query Frame = 0
Query:  498 LLCTGAAVRNPRLQDSGPVTGDMLEQ-----QTLGHASTYRG---REVLLADMKAFRMENGRGVDGGGGGAAVFADFVRWYRPECWQSTAPADDWVGPSEDRMGGAKDDDKRLAWPGQGQILWKSPLVSHPRSDEPGVSPTSSPSAGPLAQSAPPSMVTLAGWLSCWGDAGAAAEEEREVAGGRALQPALLFRDVKEGEKALHFLETISPGSLLVQLLSGLLGLSVFVLEEGCSG 724
            LL +   +  P  QD+  +T DM E+     +  G A +  G   R++L +DM AF+  N           AVF DF+RW+ P  W+S           EDR  G K+D  +  WP +G++  +  +  H  S                             W   W D+ A    E++           LF  ++EGEK LH+LET+ P  LL Q++     +S   L +   G
Sbjct:  574 LLHSFQKMHAPYTQDAPVMTEDMHEERLHAAEVCGDAFSTSGQLERDILSSDMSAFKAANPD---------AVFEDFIRWHSPGDWESEE--------IEDRSTGNKEDPDQCNWPPRGKLSQR--MSEHGNS-----------------------------WRKIWNDSPALPASEQKP----------LFDPIREGEKVLHYLETLQPHHLLEQMVCSAFKVSADTLNQTSFG 750          
BLAST of mRNA_S-firma_M_contig893.19830.1 vs. uniprot
Match: A0A5P1ED25_ASPOF (Rab3 GTPase-activating protein catalytic subunit n=3 Tax=Asparagus officinalis TaxID=4686 RepID=A0A5P1ED25_ASPOF)

HSP 1 Score: 66.2 bits (160), Expect = 3.040e-7
Identity = 62/237 (26.16%), Postives = 96/237 (40.51%), Query Frame = 0
Query:  496 SRLLCTGAAVRNPRLQDSGPVTGDMLEQ-----QTLGHASTYRG---REVLLADMKAFRMENGRGVDGGGGGAAVFADFVRWYRPECWQSTAPADDWVGPSEDRMGGAKDDDKRLAWPGQGQILWKSPLVSHPRSDEPGVSPTSSPSAGPLAQSAPPSMVTLAGWLSCWGDAGAAAEEEREVAGGRALQPALLFRDVKEGEKALHFLETISPGSLLVQLLSGLLGLSVFVLEEGCSG 724
            S LL +   +  P  Q++ P+T DM E+     +  G A +  G   R++L +DM AF+  N           A+F DF+RW+ P  W++    D      +D+M G        +WP +G++          R  E G S                       W   W D+ A    E++           LF  ++EGEK LH+LET+ P  LL Q+++     S   L +   G
Sbjct:  588 STLLHSFQKMHAPYTQEAPPMTEDMHEERLRAVEAFGDAFSVSGQLERDILSSDMSAFKAANPD---------ALFEDFIRWHSPTDWENDETGDRL---RDDKMEGDN------SWPPRGRLSQ--------RMSEQGNS-----------------------WRKIWNDSPALPVSEQKP----------LFDPIREGEKILHYLETLKPQQLLEQMVTTAFRASADTLNQTAFG 765          
BLAST of mRNA_S-firma_M_contig893.19830.1 vs. uniprot
Match: A0A2G5EUW2_AQUCA (Rab3 GTPase-activating protein catalytic subunit n=2 Tax=Aquilegia coerulea TaxID=218851 RepID=A0A2G5EUW2_AQUCA)

HSP 1 Score: 65.1 bits (157), Expect = 6.890e-7
Identity = 64/235 (27.23%), Postives = 97/235 (41.28%), Query Frame = 0
Query:  498 LLCTGAAVRNPRLQDSGPVTGDMLEQ-----QTLGHASTYRG---REVLLADMKAFRMENGRGVDGGGGGAAVFADFVRWYRPECWQSTAPADDWVGPSEDRMGGAKDDDKRLAWPGQGQILWKSPLVSHPRSDEPGVSPTSSPSAGPLAQSAPPSMVTLAGWLSCWGDAGAAAEEEREVAGGRALQPALLFRDVKEGEKALHFLETISPGSLLVQLLSGLLGLSVFVLEEGCSG 724
            LL +   +  P  QD+  +T DM E+     + LG+  ++ G   +++L +DM AF+  N           AVF DF+RW+ P  W+ TA  +D       R GG + + +R+ WP +G++  +  +  H                G L             W   W D  A    E++           L    +EGEK LH+LETI P  LL Q+L      S   L +   G
Sbjct:  588 LLNSYQRMHAPYTQDAPIMTEDMHEERLRAVEALGNTFSFSGQLEKDILSSDMSAFKAANPD---------AVFEDFIRWHSPGDWE-TAEFED------QRSGGYEMEGQRVDWPPRGRLSTR--MSEH----------------GNL-------------WRRIWNDVPALPASEQKP----------LLDPNREGEKILHYLETIRPHQLLQQMLCTAFRASADTLNQTSFG 765          
BLAST of mRNA_S-firma_M_contig893.19830.1 vs. uniprot
Match: A0A398A1I7_BRACM (Rab3 GTPase-activating protein catalytic subunit n=1 Tax=Brassica campestris TaxID=3711 RepID=A0A398A1I7_BRACM)

HSP 1 Score: 64.3 bits (155), Expect = 1.040e-6
Identity = 60/218 (27.52%), Postives = 89/218 (40.83%), Query Frame = 0
Query:  498 LLCTGAAVRNPRLQDSGPVTGDMLEQ-----QTLGHASTYRG---REVLLADMKAFRMENGRGVDGGGGGAAVFADFVRWYRPECWQSTAPADDWVGPSEDRMGGAKDDDKRLAWPGQGQILWKSPLVSHPRSDEPGVSPTSSPSAGPLAQSAPPSMVTLAGWLSCWGDAGAAAEEEREVAGGRALQPALLFRDVKEGEKALHFLETISPGSLLVQLL 707
            LL     +  P  QD   +T DM E+     +  G +    G   +++LL+DM AF+  N           AVF DF+RW+ P  W+S+ P       + +   G+  +D    WP QG++       S   SD+           G L             W   W DA A   +E++           L    +EGEK LH+LET+ P  LL Q++
Sbjct:  341 LLKLHERLHAPFTQDPPLMTEDMHEERLQAVEAFGDSLNVPGQLEKDILLSDMSAFKAANPD---------AVFEDFIRWHSPGDWESSQPE------TAEESSGSITEDSEDKWPPQGRL-------SQRMSDQ-----------GNL-------------WRKSWSDAPALPADEQKP----------LLDPNREGEKILHYLETVRPHQLLEQMV 502          
BLAST of mRNA_S-firma_M_contig893.19830.1 vs. uniprot
Match: UPI00053F3E00 (rab3 GTPase-activating protein catalytic subunit isoform X1 n=4 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=UPI00053F3E00)

HSP 1 Score: 64.3 bits (155), Expect = 1.170e-6
Identity = 65/235 (27.66%), Postives = 90/235 (38.30%), Query Frame = 0
Query:  498 LLCTGAAVRNPRLQDSGPVTGDMLEQQ-----TLGHASTYRG---REVLLADMKAFRMENGRGVDGGGGGAAVFADFVRWYRPECWQSTAPADDWVGPSEDRMGGAKDDDKRLAWPGQGQILWKSPLVSHPRSDEPGVSPTSSPSAGPLAQSAPPSMVTLAGWLSCWGDAGAAAEEEREVAGGRALQPALLFRDVKEGEKALHFLETISPGSLLVQLLSGLLGLSVFVLEEGCSG 724
            LL +   +  P  QD+ P+T DM E++         +S++     RE+LL+DM AF+  N           AVF DF+RW+ P  W S        G  E R+ G +     + WP +GQ+          R  E G                         W   W DA A    E++           L    +EGEK LH+LET+ P  LL Q+L      S   L     G
Sbjct:  563 LLSSCQRMHAPFTQDAPPMTEDMHEERLNAVAAFSDSSSFSAQLEREILLSDMSAFKAANPD---------AVFEDFIRWHSPGDWISD-------GNEESRLSGTQ---LSVNWPPRGQLS--------KRMSENGNF-----------------------WRKLWNDAPALPAYEQKP----------LLDPNREGEKILHYLETLRPHQLLEQMLCTAFRASADTLHRASFG 737          
BLAST of mRNA_S-firma_M_contig893.19830.1 vs. uniprot
Match: M4CRC2_BRARP (Rab3 GTPase-activating protein catalytic subunit n=4 Tax=Brassica TaxID=3705 RepID=M4CRC2_BRARP)

HSP 1 Score: 64.3 bits (155), Expect = 1.320e-6
Identity = 60/218 (27.52%), Postives = 89/218 (40.83%), Query Frame = 0
Query:  498 LLCTGAAVRNPRLQDSGPVTGDMLEQ-----QTLGHASTYRG---REVLLADMKAFRMENGRGVDGGGGGAAVFADFVRWYRPECWQSTAPADDWVGPSEDRMGGAKDDDKRLAWPGQGQILWKSPLVSHPRSDEPGVSPTSSPSAGPLAQSAPPSMVTLAGWLSCWGDAGAAAEEEREVAGGRALQPALLFRDVKEGEKALHFLETISPGSLLVQLL 707
            LL     +  P  QD   +T DM E+     +  G +    G   +++LL+DM AF+  N           AVF DF+RW+ P  W+S+ P       + +   G+  +D    WP QG++       S   SD+           G L             W   W DA A   +E++           L    +EGEK LH+LET+ P  LL Q++
Sbjct:  588 LLKLHERLHAPFTQDPPLMTEDMHEERLQAVEAFGDSLNVPGQLEKDILLSDMSAFKAANPD---------AVFEDFIRWHSPGDWESSQPE------TAEESSGSITEDSEDKWPPQGRL-------SQRMSDQ-----------GNL-------------WRKSWSDAPALPADEQKP----------LLDPNREGEKILHYLETVRPHQLLEQMV 749          
BLAST of mRNA_S-firma_M_contig893.19830.1 vs. uniprot
Match: A0A6J0MMK1_RAPSA (Rab3 GTPase-activating protein catalytic subunit n=2 Tax=Raphanus sativus TaxID=3726 RepID=A0A6J0MMK1_RAPSA)

HSP 1 Score: 63.9 bits (154), Expect = 1.560e-6
Identity = 59/218 (27.06%), Postives = 89/218 (40.83%), Query Frame = 0
Query:  498 LLCTGAAVRNPRLQDSGPVTGDMLEQ-----QTLGHASTYRG---REVLLADMKAFRMENGRGVDGGGGGAAVFADFVRWYRPECWQSTAPADDWVGPSEDRMGGAKDDDKRLAWPGQGQILWKSPLVSHPRSDEPGVSPTSSPSAGPLAQSAPPSMVTLAGWLSCWGDAGAAAEEEREVAGGRALQPALLFRDVKEGEKALHFLETISPGSLLVQLL 707
            LL +   +  P  QD   +T DM E+     +  G +    G   +++LL+DM AF+  N           AVF DF+RW+ P  W+S+        P      G+  +D +  WP QG++       S   SD+           G L             W   W DA A   ++++           L    +EGEK LH+LET+ P  LL Q++
Sbjct:  585 LLKSHQRLHAPYTQDPPLMTEDMHEERLQAVEAFGDSLNVPGQLEKDILLSDMSAFKAANPD---------AVFEDFIRWHSPGDWESS-------DPETTEASGSISEDSKDKWPPQGRL-------SQRMSDQ-----------GNL-------------WRKSWNDAPALPADDQKP----------LLDPNREGEKILHYLETVRPHQLLEQMV 745          
BLAST of mRNA_S-firma_M_contig893.19830.1 vs. uniprot
Match: A0A6J0ZUW2_9ROSI (Rab3 GTPase-activating protein catalytic subunit n=9 Tax=Byttnerioideae TaxID=214909 RepID=A0A6J0ZUW2_9ROSI)

HSP 1 Score: 62.8 bits (151), Expect = 3.540e-6
Identity = 66/249 (26.51%), Postives = 102/249 (40.96%), Query Frame = 0
Query:  497 RLLCTGAAVRNPRLQDSGPVTGDMLEQ-----QTLGHASTYRG---REVLLADMKAFRMENGRGVDGGGGGAAVFADFVRWYRPECWQSTAPADDWVGPSEDRMGGAKDDDKRLAWPGQGQILWKSPLVSHPRSDEPGVSPTSSPSAGPLAQSAPPSMVTLAGWLSCWGDAGAAAEEEREVAGGRALQPALLFRDVKEGEKALHFLETISPGSLLVQLLSGLLGLSVFVLEEGCSGAGSIPGVQARSIQ 737
            +LL +  ++  P  QD+  +T DM E+     +  G +  +     R+ L +DM +F+  N           AVF DF+RW+ P  W++     +  GPS++R  G KDD     WP +G++       S   SD            G L             W   W DA      E++           L    +EGEK LH+LET+ P  LL Q++      S   L +  +  GS+  + A+  Q
Sbjct:  591 KLLKSYQSLHAPYTQDAPLMTEDMHEERLRAVEAFGDSFDFSAQLERDTLSSDMSSFKAANPD---------AVFEDFIRWHSPGDWENDESEAN--GPSKNRTEGMKDD-----WPPRGRL-------SQRMSDH-----------GNL-------------WRQIWNDAPVLPAYEQKP----------LLDPTREGEKILHYLETVRPHQLLEQMVCTAFRASADTLNQ--TNFGSLSQMTAKMDQ 780          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig893.19830.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LFM1_ECTSI4.210e-16939.34Rab3 GTPase-activating protein catalytic subunit n... [more]
A0A6H5JCY7_9PHAE4.500e-14241.27Rab3 GTPase-activating protein catalytic subunit n... [more]
UPI0018AE53513.870e-926.81rab3 GTPase-activating protein catalytic subunit i... [more]
A0A5P1ED25_ASPOF3.040e-726.16Rab3 GTPase-activating protein catalytic subunit n... [more]
A0A2G5EUW2_AQUCA6.890e-727.23Rab3 GTPase-activating protein catalytic subunit n... [more]
A0A398A1I7_BRACM1.040e-627.52Rab3 GTPase-activating protein catalytic subunit n... [more]
UPI00053F3E001.170e-627.66rab3 GTPase-activating protein catalytic subunit i... [more]
M4CRC2_BRARP1.320e-627.52Rab3 GTPase-activating protein catalytic subunit n... [more]
A0A6J0MMK1_RAPSA1.560e-627.06Rab3 GTPase-activating protein catalytic subunit n... [more]
A0A6J0ZUW2_9ROSI3.540e-626.51Rab3 GTPase-activating protein catalytic subunit n... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR026147Rab3 GTPase-activating protein catalytic subunitPFAMPF13890Rab3-GTPase_catcoord: 494..591
e-value: 3.5E-8
score: 33.2
IPR026147Rab3 GTPase-activating protein catalytic subunitPANTHERPTHR21422FAMILY NOT NAMEDcoord: 1..993
NoneNo IPR availablePANTHERPTHR21422:SF9RAB3 GTPASE-ACTIVATING PROTEIN CATALYTIC SUBUNITcoord: 1..993

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig893contigS-firma_M_contig893:18328..24977 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig893.19830.1mRNA_S-firma_M_contig893.19830.1Sphaerotrichia firma Sfir_13m malemRNAS-firma_M_contig893 17194..26553 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_M_contig893.19830.1 ID=prot_S-firma_M_contig893.19830.1|Name=mRNA_S-firma_M_contig893.19830.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=996bp
MSLLWMSFVRDVRLLWEDGAVLARMGPIPEVDGTSMFDRSAGCTGQDRSV
ASQLRGNRQAYAGVGGADSGARVAGSGRGRQDRSLTLYPDTRMCLIWQKL
QMLNCCRAGVAAQAELRPSPSSPSSPEEEEEEEEEDEDDDEGFYDTQEYY
QTSEDEAGEVGGGSGDGRPDGDVPGGAREGLGDLGGSERGDEETGAAGAG
GDAAEGDAANDDGSDDRARGDCDGPENDADALGGKVLQHQPGEITPVPAP
GTESPATTTTAAVSTTAKLPLVQVRQKEGPEVESPSAAEAVEAALPAPSS
PQAPSPPSAAEPPTEENVEEPSLSAPISAGAIDQHAAVSVRATPEDSLEE
DRAGASSEHATGKEEEEQIRTAAAPGGQEPLTSPRHEHEVGSGDGDGDGD
GDGGPCTSDEAASSSPAGSAQEPPPLQGEEISGPVAVAATCTAENAPPAA
AVAPESASSGGPTAEHPASADNAPAATAAGEAPADVSGEEPPPPMSRLLC
TGAAVRNPRLQDSGPVTGDMLEQQTLGHASTYRGREVLLADMKAFRMENG
RGVDGGGGGAAVFADFVRWYRPECWQSTAPADDWVGPSEDRMGGAKDDDK
RLAWPGQGQILWKSPLVSHPRSDEPGVSPTSSPSAGPLAQSAPPSMVTLA
GWLSCWGDAGAAAEEEREVAGGRALQPALLFRDVKEGEKALHFLETISPG
SLLVQLLSGLLGLSVFVLEEGCSGAGSIPGVQARSIQSRKRKVVEAVELL
ADASMSVSTSTTTTRVAESSTSSSVGGEGGADDAGTEGSSSSSSSSGGVG
SNNGDCGPTENSTEGSSLSPFRAALLSADGACVAVKKAESALARAVSLQR
SLPGQKDLVDAIVGACNEAGGGAGEARVPARSQKEFLRDLLLAQGIQKTP
GSELDELLASYDEEHRQEGLKDGGGVDIGSGGGGGVMPPPRTKEYVLRCQ
TPAPFCSRNVGRGQMDAYPTPPSRMYAKTDGKNLRVALSLCESEI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR026147Rab3-GAP_cat_su