prot_S-firma_M_contig893.19829.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_M_contig893.19829.1
Unique Nameprot_S-firma_M_contig893.19829.1
Typepolypeptide
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length595
Homology
BLAST of mRNA_S-firma_M_contig893.19829.1 vs. uniprot
Match: D8LFM2_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFM2_ECTSI)

HSP 1 Score: 325 bits (833), Expect = 4.630e-100
Identity = 202/347 (58.21%), Postives = 253/347 (72.91%), Query Frame = 0
Query:    1 AFVAPLLPEAQCGTAARAPLSR-AARINSDGGGSRSR---GRLPGVRPRQHTTASKLAMAXXXXXXXXXXETDEEGXXXXXXXXXXX--KKDAGVLAATGVSGAVIGWNLAHSMGMGLDLVGALGGCLAAVGLLAQEGQVGEAATKFGEFALGAFEVVGVVASTSEVPAIVAKNVGEEFLEVVEFTSAAATKGYIESLPEPNLRLEREVEKSNKKVVDLKGQVEEVKQALAEAKAQLKERAENQRVVNAAKATAAELAAAKVVIKEKDDLIAKNLKLARKVKDAFDADLKAAKAETARFREMLESRADVDDNFKLLAEASDILEERVQEYEARLRVLTEENDAVRAD 341
            AFV P +PEA   +A R PLS  A + NSDG  SRSR   G   G+  R+   A+  A+           E++E G             +KDAGVLAATG +GA++GW+L HS+G  LD++G   GCLAAVGLLAQEG +G++A KFGEFALGAFEVV  VA++++VPA +A +VGEEFLEVVEFTS A TKGY++SLPEP +R E ++ +S +   +LK Q+++V  A AEAK QLK+RAENQR+VNAAK T AELAAAK  + EKD  IAK+L+LARK KDAFD DLKAAKAE  RFR+M+E+RAD+DD+++ LAEASD LEERVQ+YEARLRVL EEND +RAD
Sbjct:   21 AFVGPSIPEAS--SAKRVPLSTPAVKRNSDGSSSRSRSXXGSAIGMSRRRAALAASSALKMSGEDE----ESEEYGDPAAEVEVVTADKRKDAGVLAATGATGAIVGWSLGHSLG--LDMIGMFAGCLAAVGLLAQEGTIGQSAAKFGEFALGAFEVVSTVAASTDVPAKMASSVGEEFLEVVEFTSGAMTKGYMDSLPEPVVRYEAQIARSKETAKELKEQLDKVSAAFAEAKEQLKQRAENQRIVNAAKTTVAELAAAKAAVVEKDVAIAKSLQLARKEKDAFDVDLKAAKAEAGRFRDMVETRADMDDDYRALAEASDTLEERVQDYEARLRVLAEENDGIRAD 359          
BLAST of mRNA_S-firma_M_contig893.19829.1 vs. uniprot
Match: A0A6H5L6Y4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6Y4_9PHAE)

HSP 1 Score: 137 bits (346), Expect = 7.870e-32
Identity = 132/387 (34.11%), Postives = 167/387 (43.15%), Query Frame = 0
Query:    1 AFVAPLLPEAQCGTAARAPLSR-AARINSDGGGSRSRGRLPGVRPRQHTTASKLAMAXXXXXXXXXXETDEE---GXXXXXXXXXXXKKDAGVLAATGVSGAVIGWNLAHSMGMGLDLVG--------------------------ALGG----------------------------------------------------------------------CLAAVGLLAQEGQVGEAATKFGEFALGAFEVVGVVASTSEVPAIVAKNVGEEFLEVVEFTSAAATK-----------------------------------GYIESLPEPNLRLEREVEKSNKKVVDLKGQVEEVKQALAEAKAQLKERAENQRVVNAAKATAAELA 252
            AFVAP +PEA   +A   PLS  A +  SDG  SRS     G         + LA +          E  EE               +KDAGVLAATG +GA++GW+L HS+G  LD++G                           LGG                                                                      CLAAVGLLAQEG +G+   K GEFALGAFEVV  VA+++ VPA VA +VGEEFLEVVEFTS A TK                                   GY++SLP+P +R + ++ +S +   +LK Q+++V  A AEAK QLK+RAENQR+V+AAK T AELA
Sbjct:   21 AFVAPSIPEAS--SAKCVPLSTPAVKSGSDGSSSRSSMSNSGSAIGMSRRRAALAASTSVLKMSGEDEAAEEYGDPAAEVEVVAADKRKDAGVLAATGATGAIVGWSLGHSLG--LDMMGMFAGGLPRKEGVRFSKSSTDIRRREEGLGGVQVATSRRDHQDVRKGLSRRKRTYLRTSEEILTFVDRASYAARTDTEKHRSASSCLAHPAPPPIRVFFAGCLAAVGLLAQEGTIGQTTAKVGEFALGAFEVVSTVATSTNVPAKVASSVGEEFLEVVEFTSGAVTKVGGRSLKPLFGSSSHIFTQHFFHANSGTPGGTEKKGYMDSLPDPVVRYKAQIARSKQTAAELKEQLDKVSAAFAEAKKQLKQRAENQRIVDAAKTTVAELA 403          
BLAST of mRNA_S-firma_M_contig893.19829.1 vs. uniprot
Match: A0A6H5L7P9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7P9_9PHAE)

HSP 1 Score: 114 bits (284), Expect = 8.010e-26
Identity = 62/89 (69.66%), Postives = 74/89 (83.15%), Query Frame = 0
Query:  253 AAKVVIKEKDDLIAKNLKLARKVKDAFDADLKAAKAETARFREMLESRADVDDNFKLLAEASDILEERVQEYEARLRVLTEENDAVRAD 341
            AAK  + EKD  IAK+L+LARK KDAFD DLKAA AE  RFR+M+E+RAD+DD ++ LAEASD L+ERVQ+YEARLRVL EEND +RAD
Sbjct:   27 AAKAAVVEKDAAIAKSLQLARKEKDAFDMDLKAANAEAGRFRDMVETRADMDDEYRALAEASDTLDERVQDYEARLRVLAEENDGIRAD 115          
BLAST of mRNA_S-firma_M_contig893.19829.1 vs. uniprot
Match: A0A836C7Q9_9STRA (SAP domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7Q9_9STRA)

HSP 1 Score: 63.9 bits (154), Expect = 6.730e-7
Identity = 43/125 (34.40%), Postives = 67/125 (53.60%), Query Frame = 0
Query:   86 DAGVLAATGVSGAVIGWNLAHSMGMGLDLVGALGGCLAAVGLLAQEGQVGEAATKFGEFALGAFEVVGVVASTSEVPAIVAKNVGEEFLEVVEFTSAAATKGYIESLPEPNLRLEREVEKSNKKV 210
            D G  AATG +GA +GW LA S+ + +DL GA+ G +        +G  G  +   G+   GA E    V + S++   +   VG E ++V+E TSAA  KG   S P P   +ER++ ++ +K+
Sbjct:   87 DVGTAAATGAAGAFLGWALARSVDLDIDLYGAVVGTVLGFYSTTLQGTAGSTSRAVGKVTRGAAEAAAKVVNDSKLGDKLLGAVGNELVDVLELTSAAVAKGVQASKP-PETEVERQLAQTREKL 210          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig893.19829.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LFM2_ECTSI4.630e-10058.21Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5L6Y4_9PHAE7.870e-3234.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L7P9_9PHAE8.010e-2669.66Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836C7Q9_9STRA6.730e-734.40SAP domain-containing protein n=1 Tax=Tribonema mi... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 547..567
NoneNo IPR availableCOILSCoilCoilcoord: 307..373
NoneNo IPR availableCOILSCoilCoilcoord: 515..535
NoneNo IPR availableCOILSCoilCoilcoord: 386..445
NoneNo IPR availableCOILSCoilCoilcoord: 196..241
NoneNo IPR availableCOILSCoilCoilcoord: 456..513

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig893contigS-firma_M_contig893:7401..15578 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig893.19829.1mRNA_S-firma_M_contig893.19829.1Sphaerotrichia firma Sfir_13m malemRNAS-firma_M_contig893 7401..15580 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_M_contig893.19829.1 ID=prot_S-firma_M_contig893.19829.1|Name=mRNA_S-firma_M_contig893.19829.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=595bp
AFVAPLLPEAQCGTAARAPLSRAARINSDGGGSRSRGRLPGVRPRQHTTA
SKLAMAAAGAGGDGEGETDEEGGDDGGGGGGGGKKDAGVLAATGVSGAVI
GWNLAHSMGMGLDLVGALGGCLAAVGLLAQEGQVGEAATKFGEFALGAFE
VVGVVASTSEVPAIVAKNVGEEFLEVVEFTSAAATKGYIESLPEPNLRLE
REVEKSNKKVVDLKGQVEEVKQALAEAKAQLKERAENQRVVNAAKATAAE
LAAAKVVIKEKDDLIAKNLKLARKVKDAFDADLKAAKAETARFREMLESR
ADVDDNFKLLAEASDILEERVQEYEARLRVLTEENDAVRADYSAEIKNME
AERASMRERISSLETALESSEAAIDEQRAGLEAEQSKLLAEVSDTLEERV
QEYEARLRVLTEENDAVRADYSAEIKNMEAERASMRERISSLEADAGLPG
LQRRPEAELSRRRQALEENEAAAEAEAARAAKSAAEQEKARAAKEVKAAK
AEAAKAAAAARAEGAAKAKAEKKAAAAASAAAKKEKAKETKKREAGKKKA
AAAADDAAKQRRRQQEQDAMAQKEKSRAAVKSRSRAASPAAVAAP
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