prot_S-firma_M_contig893.19828.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_M_contig893.19828.1
Unique Nameprot_S-firma_M_contig893.19828.1
Typepolypeptide
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length302
Homology
BLAST of mRNA_S-firma_M_contig893.19828.1 vs. uniprot
Match: A0A6H5L7D8_9PHAE (UBC core domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L7D8_9PHAE)

HSP 1 Score: 313 bits (803), Expect = 8.530e-104
Identity = 176/302 (58.28%), Postives = 209/302 (69.21%), Query Frame = 0
Query:    1 MANARHSLNSRWWAILLFVCVSFSSAKRPSRVLTQNSPSVRRIMSEWKQVQAQGLAMGEGGFSVSGNSSDTFRLKPVGSMFEWHFTFLGAKGTPFEGGLYHGSISLPANYPKSGPSVRLLNTNQRFKVGSRICLSASEFHQDSWQPXXXXXXXXXXXXXXXTEPAAEIGSVRGATRTQKRRAAARSRSFECAVCGCRHASFPEDKFPTPEGFEEVKDAPRPRDAE-GEEEGSRVGVGGGRTGRPSGGGEMGVAAGVGGRVGVAERAREGPLSKTMRLLRDVSFVKSLLLTVALIYASAFLFQ 301
            MA  R SL  RWWA++L + ++ SSA+R S VL+QNSPS+RRIMSEWKQVQA GLAMG+G +S  GNSS+TFRLKPVG+MFEWHFTFLGAK +PFEGGLYHGSISLP NYP+SGPSVRLLNTN RFKVGSRICLSASE+HQ++WQP               TE A EIG+VRGAT +QKR+AA +SRSF CA CGC H +FPED+FP P+GF++ K A    D   G    +RV VG            +G A     R G+  R+R   LS T+RL+    F    LL + LI AS FL Q
Sbjct:    2 MARERCSLLRRWWALVLLMGMACSSARRSSHVLSQNSPSMRRIMSEWKQVQADGLAMGQGHWSSKGNSSETFRLKPVGNMFEWHFTFLGAKDSPFEGGLYHGSISLPENYPQSGPSVRLLNTNMRFKVGSRICLSASEYHQETWQPSWTVASLVSALVAHMTEAAVEIGAVRGATPSQKRKAAVKSRSFVCAACGCCHDAFPEDRFPIPKGFDKGKKAGAGADGSAGARREARVAVG------------VGEAPAAATRGGLTGRSR---LSWTVRLMTSKPF----LLALTLIIASVFLNQ 284          
BLAST of mRNA_S-firma_M_contig893.19828.1 vs. uniprot
Match: W7TJJ9_9STRA (Ubiquitin-conjugating enzyme e2 j1 n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TJJ9_9STRA)

HSP 1 Score: 145 bits (366), Expect = 5.560e-38
Identity = 92/244 (37.70%), Postives = 133/244 (54.51%), Query Frame = 0
Query:   39 SVRRIMSEWKQVQAQGLAM---GEGGFSVSGNSSDTFRLKPV-GSMFEWHFTFLGAKGTPFEGGLYHGSISLPANYPKSGPSVRLLNTNQRFKVGSRICLSASEFHQDSWQPXXXXXXXXXXXXXXXTEPAAEIGSVRGATRTQKRRAAARSRSFECAVCGCRHASFPEDKFPTPEGFEEVKDAPRPRDAEGEEEGSRVGVGGGRTGRPSGGGEMGVAAGVGGRVGVAERAREGPLSKTMRLLR 278
            S RR++ EW+ + A+GL +   GEG  S+S N+++  RL P  G++ EWHF+  G  G+ +EGG+YHG + LPANYP++ P +++LN + RF+VG+ ICLSA+ FHQ++WQP                 PA E+G +  + R +K   A RSR F C  CG  H++FP   F +     EV   P      GE  G      G R GR +G             VGVA+RA    L++ + +LR
Sbjct:   53 SYRRLIKEWRGIMAEGLVLMDSGEGNCSLS-NNTEHIRLAPCRGNLHEWHFSVAGPPGSVYEGGIYHGRVILPANYPQTAPRLQMLNPSGRFEVGADICLSATSFHQETWQPVWTVRTLVSALRSHMATPAVEVGGMECSARRRKF-LARRSRGFLCRGCGVDHSNFPGRVFRSLPEVGEVSRVP----GRGETRGR-----GNRGGRETG-------------VGVADRAAFSGLARLVAVLR 272          
BLAST of mRNA_S-firma_M_contig893.19828.1 vs. uniprot
Match: A0A4D9CVX3_9STRA (UBC core domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CVX3_9STRA)

HSP 1 Score: 129 bits (324), Expect = 1.730e-32
Identity = 86/231 (37.23%), Postives = 123/231 (53.25%), Query Frame = 0
Query:   52 AQGLAM---GEGGFSVSGNSSDTFRLKPV-GSMFEWHFTFLGAKGTPFEGGLYHGSISLPANYPKSGPSVRLLNTNQRFKVGSRICLSASEFHQDSWQPXXXXXXXXXXXXXXXTEPAAEIGSVRGATRTQKRRAAARSRSFECAVCGCRHASFPEDKFPTPEGFEEVKDAPRPRDAEGEEEGSRVGVGGGRTGRPSGGGEMGVAAGVGGRVGVAERAREGPLSKTMRLLR 278
            A+GL +   G G  S+S N+++  RL P  G++ EWHF+  G  G+ +EGG+YHG + LPANYP++ P +++LN + RF+VG+ ICLSA+ FHQ++WQP                 PA E+G +  + R +K   A RSR F C  CG  H++FP   F +     EV   P      GE  G      G R GR +G             VGVA+RA    L++ + +LR
Sbjct:    2 AEGLVLVDSGGGNCSLS-NNTEHIRLAPCRGNLHEWHFSVAGPPGSVYEGGIYHGRVILPANYPQTAPRLQMLNPSGRFEVGADICLSATSFHQETWQPVWTVRTLVSALRSHMATPAVEVGGMECSARRRKF-LARRSRGFLCRGCGVDHSNFPGRIFRSLPEVGEVSRVP----GRGETGGK-----GNRGGRETG-------------VGVADRAASSGLARLVAVLR 208          
BLAST of mRNA_S-firma_M_contig893.19828.1 vs. uniprot
Match: A0A5J4Z378_PORPP (Ubiquitin-conjugating enzyme E2 J1 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z378_PORPP)

HSP 1 Score: 113 bits (282), Expect = 8.490e-26
Identity = 63/167 (37.72%), Postives = 85/167 (50.90%), Query Frame = 0
Query:   39 SVRRIMSEWKQVQAQGLAMGEGGFSVSGNSSDTFRLKPV-GSMFEWHFTFLGAKGTPFEGGLYHGSISLPANYPKSGPSVRLLNTNQRFKVGSRICLSASEFHQDSWQPXXXXXXXXXXXXXXXTEPAAEIGSVRGATRTQKRRAAARSRSFECAVCGCRHASFPED 204
            +V+RIM E K++Q +    G             F   P+   +FEWHFT  G   T F+GGLYHG I LPA YP   P + LL  N RF+VG+RICLS +  HQ++WQP                  A  +GS+       +R  AA+S +F+C +CGC+     ED
Sbjct:    9 AVKRIMLEVKELQREAQLPGS-----------FFHASPLENDLFEWHFTVKGPPDTAFQGGLYHGRIILPAEYPMKAPEIVLLTPNGRFEVGTRICLSITSHHQETWQPSWGIRTILTALIGFMPSKAEGLGSLNFPAE-DRRALAAKSIAFQCPICGCKVKELFED 163          
BLAST of mRNA_S-firma_M_contig893.19828.1 vs. uniprot
Match: A0A7S2Y1G6_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y1G6_9STRA)

HSP 1 Score: 109 bits (273), Expect = 4.290e-25
Identity = 59/146 (40.41%), Postives = 80/146 (54.79%), Query Frame = 0
Query:   66 GNSSDTFRLKPVG-SMFEWHFTFLGAKGTPFEGGLYHGSISLPANYPKSGPSVRLLNTNQRFKVGSRICLSASE-FHQDSWQPXXXXXXXXXXXXXXXTEPA-AEIGSVRGATRTQKRRAAAR-SRSFECAVCGCRHASFPEDKFP 207
            G + +  RL P+  ++FEWHFTF G  G+ FEGG+YHG++ LP+NYP S P + +L  + RF+VG  ICL+    +H ++W P                  A  EIG +   T ++KRR  A  SR   C  CGCRH  FP   FP
Sbjct:    2 GEAEEDIRLAPLTKNLFEWHFTFAGPPGSAFEGGVYHGAVILPSNYPSSAPHIMMLTPSGRFQVGVPICLAGGTGYHPEAWNPGQWTIQALVTALRQHMLTAPTEIGGIH--TSSEKRRQLALLSRMHSCGQCGCRHREFPGKVFP 145          
BLAST of mRNA_S-firma_M_contig893.19828.1 vs. uniprot
Match: F6T7J7_CIOIN (Ubiquitin-conjugating enzyme E2 J1-like n=1 Tax=Ciona intestinalis TaxID=7719 RepID=F6T7J7_CIOIN)

HSP 1 Score: 108 bits (271), Expect = 4.460e-24
Identity = 61/170 (35.88%), Postives = 89/170 (52.35%), Query Frame = 0
Query:   37 SPSVRRIMSEWKQVQAQGLAMGEGGFSVSGNSSDTFRLKPVG-SMFEWHFTFLGAKGTPFEGGLYHGSISLPANYPKSGPSVRLLNTNQRFKVGSRICLSASEFHQDSWQPXXXXXXXXXXXXXXX-TEPAAEIGSVRGATRTQKRRAAARSRSFECAVCGCRHASFPED 204
            SP+V+R+M E +++ A                +  +  KP+  ++FEWHFTF G K + F+GGLYHG I LP  YP   PS+ LLN N RF++  +ICLS S +H +SWQP                T+    IG++   T  +++  A RS+S+ C  CGC     P +
Sbjct:    9 SPAVKRLMREAQELAAP---------------TYEYSAKPLDDNLFEWHFTFRGPKDSDFDGGLYHGRIILPPEYPMKPPSIMLLNANGRFELNKKICLSISGYHPESWQPSWSIRTAILAIIGFMPTKGEGAIGAL-DYTAEERKVLARRSKSYSCTACGCIKDLLPSE 162          
BLAST of mRNA_S-firma_M_contig893.19828.1 vs. uniprot
Match: A0A0M0JYC5_9EUKA (Ubiquitin-conjugating enzyme e2 j1 (Fragment) n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JYC5_9EUKA)

HSP 1 Score: 103 bits (257), Expect = 5.220e-23
Identity = 59/162 (36.42%), Postives = 82/162 (50.62%), Query Frame = 0
Query:   36 NSPSVRRIMSEWKQVQAQGLAMGEGGFSVSGNSSDTFRLKPV-GSMFEWHFTFLGAKGTPFEGGLYHGSISLPANYPKSGPSVRLLNTNQRFKVGSRICLSASEFHQDSWQPXXXXXXXXXXXXXXXTEPAAEIGSVRGATRT--QKRRAAARSRSFECAVC 194
            N+P+V+RIM E +++   G             ++  F   P+  ++FEWHFT  G  GT FEGG YHG I+LP  YP   PS+ LLN + RF VG +ICLS S  H + WQP                 P    G++ G   T  ++R+ A  SR ++C  C
Sbjct:    8 NNPAVKRIMREAREIAEAG-------------ANPDFEASPLEDNLFEWHFTIRGPPGTAFEGGRYHGRITLPPEYPFKPPSITLLNASGRFTVGKKICLSVSAHHPEHWQPAWGIRTIITALIAFF--PTKAEGALAGLDYTDGERRKLAVDSRRWQCPTC 154          
BLAST of mRNA_S-firma_M_contig893.19828.1 vs. uniprot
Match: UPI001CFD78CA (uncharacterized protein n=1 Tax=Naegleria lovaniensis TaxID=51637 RepID=UPI001CFD78CA)

HSP 1 Score: 106 bits (265), Expect = 5.710e-23
Identity = 57/163 (34.97%), Postives = 84/163 (51.53%), Query Frame = 0
Query:   33 LTQNSPSVRRIMSEWKQVQAQGLAMGEGGFSVSGNSSDTFRLKPV-GSMFEWHFTFLGAKGTPFEGGLYHGSISLPANYPKSGPSVRLLNTNQRFKVGSRICLSASEFHQDSWQPXXXXXXXXXXXXXXXTEPAAEIGSVRGATRTQKRRAAARSRSFECAVC 194
            + ++   ++RI+SE +++Q               N SD +   P+  ++FEWHFT  G KGT FEGGLYHG I LP  YP   P + LL  N RF+  ++ICLS + +H +SW P                  A  IGS+   +  +KR  A +SR ++C +C
Sbjct:   52 MNKSHHGIKRILSEVRELQK--------------NPSDEYEAHPLEDNLFEWHFTIAGPKGTDFEGGLYHGRIILPPEYPHKPPDIVLLTPNGRFETNTKICLSLTSYHPESWTPQWGIRTVLIALQGFFPTEAKGIGSIEYPSHVRKR-LAIQSRKWKCDIC 199          
BLAST of mRNA_S-firma_M_contig893.19828.1 vs. uniprot
Match: A0A7S3H5G0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H5G0_9STRA)

HSP 1 Score: 104 bits (260), Expect = 8.460e-23
Identity = 58/161 (36.02%), Postives = 89/161 (55.28%), Query Frame = 0
Query:   39 SVRRIMSEWKQVQAQGLAMGEGGFSVSGNSSDTFRLKPV-GSMFEWHFTFLGAKGTPFEGGLYHGSISLPANYPKSGPSVRLLNTNQRFKVGSRICLSASEFHQDSWQPXXXXXXXXXXXXXXXTEPAAEIGSVRGATRTQKRRAAARSRSFECAVCGCRH 198
            S +RI SE++ +  Q L + +  F+ + +     RL P+  +M +WHF+F G +G+P+EGG+YHG+ISL ++YP+  P +R+   + R+KV   ICLSAS  H + W P               T    EIGS+R AT  +K+    +S S+ C  C   H
Sbjct:   28 SRQRIYSEFRDIADQLLTL-DVPFNTTSDECG-IRLSPMQNNMLDWHFSFTGVEGSPYEGGVYHGTISLSSHYPRKAPIIRMKTPSGRWKVNEEICLSASAHHPELWDPSWNLRTLVLSLRGFMTTQPNEIGSLR-ATANEKQVYMEKSTSYVCPTCNIAH 185          
BLAST of mRNA_S-firma_M_contig893.19828.1 vs. uniprot
Match: A0A0G4IZR2_PLABS (UBC core domain-containing protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4IZR2_PLABS)

HSP 1 Score: 104 bits (259), Expect = 9.050e-23
Identity = 64/173 (36.99%), Postives = 93/173 (53.76%), Query Frame = 0
Query:   29 PSRVLTQNSPSVRRIMSEWKQVQAQGLAMGEGGFSVSGNSSDTFRLKPVG-SMFEWHFTFLGAKGTPFEGGLYHGSISLPANYPKSGPSVRLLNTNQRFKVGSRICLSASEFHQDSWQPXXXXXXXXXXXXXXX-TEPAAEIGSVRGATRTQKRRAAARSRSFECAVCGCRHA 199
            PSRV    S +V+RI+ E ++++  G              S  F   P+  +MF+WHFT  G + T FEGG+YHG I LP++YP   P + LL  + RF+ G +ICLS S FH + WQP                T+P   IGS+   ++ ++R  AA+S S++C VCG  +A
Sbjct:    5 PSRV--GQSGAVKRILQEIREMRQAG--------------SGDFVAAPLDDNMFDWHFTIRGPRDTEFEGGIYHGRIVLPSDYPFKPPDLMLLTPSGRFETGKKICLSISGFHPEFWQPSWSIRTVLVALIAFLPTDPQGAIGSLEY-SKEERRAFAAQSTSWKCPVCGVVNA 160          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig893.19828.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L7D8_9PHAE8.530e-10458.28UBC core domain-containing protein n=2 Tax=Ectocar... [more]
W7TJJ9_9STRA5.560e-3837.70Ubiquitin-conjugating enzyme e2 j1 n=2 Tax=Nannoch... [more]
A0A4D9CVX3_9STRA1.730e-3237.23UBC core domain-containing protein n=1 Tax=Nannoch... [more]
A0A5J4Z378_PORPP8.490e-2637.72Ubiquitin-conjugating enzyme E2 J1 n=1 Tax=Porphyr... [more]
A0A7S2Y1G6_9STRA4.290e-2540.41Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
F6T7J7_CIOIN4.460e-2435.88Ubiquitin-conjugating enzyme E2 J1-like n=1 Tax=Ci... [more]
A0A0M0JYC5_9EUKA5.220e-2336.42Ubiquitin-conjugating enzyme e2 j1 (Fragment) n=1 ... [more]
UPI001CFD78CA5.710e-2334.97uncharacterized protein n=1 Tax=Naegleria lovanien... [more]
A0A7S3H5G0_9STRA8.460e-2336.02Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
A0A0G4IZR2_PLABS9.050e-2336.99UBC core domain-containing protein n=1 Tax=Plasmod... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00212ubc_7coord: 41..202
e-value: 7.7E-15
score: 65.3
NoneNo IPR availablePANTHERPTHR24068FAMILY NOT NAMEDcoord: 35..212
NoneNo IPR availablePANTHERPTHR24068:SF168UBIQUITIN-CONJUGATING ENZYME E2 J1coord: 35..212
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 282..300
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 22..26
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 301..301
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 13..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..12
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 27..281
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..26
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..26
score: 0.84
NoneNo IPR availableTMHMMTMhelixcoord: 281..300
IPR000608Ubiquitin-conjugating enzyme E2PFAMPF00179UQ_concoord: 67..170
e-value: 3.5E-14
score: 52.6
IPR000608Ubiquitin-conjugating enzyme E2PROSITEPS50127UBIQUITIN_CONJUGAT_2coord: 41..164
score: 17.588
IPR016135Ubiquitin-conjugating enzyme/RWD-likeGENE3D3.10.110.10coord: 27..211
e-value: 1.5E-40
score: 140.6
IPR016135Ubiquitin-conjugating enzyme/RWD-likeSUPERFAMILY54495UBC-likecoord: 40..197

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig893contigS-firma_M_contig893:3232..6278 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig893.19828.1mRNA_S-firma_M_contig893.19828.1Sphaerotrichia firma Sfir_13m malemRNAS-firma_M_contig893 3197..6544 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_M_contig893.19828.1 ID=prot_S-firma_M_contig893.19828.1|Name=mRNA_S-firma_M_contig893.19828.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=302bp
MANARHSLNSRWWAILLFVCVSFSSAKRPSRVLTQNSPSVRRIMSEWKQV
QAQGLAMGEGGFSVSGNSSDTFRLKPVGSMFEWHFTFLGAKGTPFEGGLY
HGSISLPANYPKSGPSVRLLNTNQRFKVGSRICLSASEFHQDSWQPSWTV
TSLVTALVAHMTEPAAEIGSVRGATRTQKRRAAARSRSFECAVCGCRHAS
FPEDKFPTPEGFEEVKDAPRPRDAEGEEEGSRVGVGGGRTGRPSGGGEMG
VAAGVGGRVGVAERAREGPLSKTMRLLRDVSFVKSLLLTVALIYASAFLF
Q*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016135UBQ-conjugating_enzyme/RWD
IPR000608UBQ-conjugat_E2