prot_S-firma_M_contig8926.19823.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_S-firma_M_contig8926.19823.1
Unique Name	prot_S-firma_M_contig8926.19823.1
Type	polypeptide
Organism	Sphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length	163

Homology

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BLAST of mRNA_S-firma_M_contig8926.19823.1 vs. uniprot
Match: A0A6H5KVC7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVC7_9PHAE)

HSP 1 Score: 105 bits (261), Expect = 1.830e-24
Identity = 51/72 (70.83%), Postives = 57/72 (79.17%), Query Frame = 0

Query:    1 MASSDRDALVALYNTTDGAKWTNKKNWNTNAPLSDWYGVNEVNGAGRVVKLNLSSNNLQGPIPPELGKLAAL 72
            MA  DR+ALVALYN T GAKW NK+NWNT A LS WYGV EV+  GRVV L+L+ NNLQG IPPELG+L AL
Sbjct:   96 MAQPDREALVALYNATGGAKWENKRNWNTRAALSQWYGV-EVDSQGRVVTLSLAGNNLQGTIPPELGQLTAL 166

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BLAST of mRNA_S-firma_M_contig8926.19823.1 vs. uniprot
Match: A0A6H5JFA4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFA4_9PHAE)

HSP 1 Score: 102 bits (253), Expect = 2.120e-22
Identity = 49/72 (68.06%), Postives = 55/72 (76.39%), Query Frame = 0

Query:    1 MASSDRDALVALYNTTDGAKWTNKKNWNTNAPLSDWYGVNEVNGAGRVVKLNLSSNNLQGPIPPELGKLAAL 72
            MA +DR++L A YN TDGAKW    NW + APLSDWYGV E N  GRVVKL LSSNNL+GPIP ELG L+AL
Sbjct:   35 MAQTDRESLTAFYNATDGAKWIRNTNWGSGAPLSDWYGV-EANDQGRVVKLYLSSNNLRGPIPLELGNLSAL 105

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BLAST of mRNA_S-firma_M_contig8926.19823.1 vs. uniprot
Match: D7G496_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G496_ECTSI)

HSP 1 Score: 100 bits (248), Expect = 5.170e-22
Identity = 49/72 (68.06%), Postives = 56/72 (77.78%), Query Frame = 0

Query:    1 MASSDRDALVALYNTTDGAKWTNKKNWNTNAPLSDWYGVNEVNGAGRVVKLNLSSNNLQGPIPPELGKLAAL 72
            MA +DR ALVALYN T G KW N +NWNT+A LS WY V EVN  GRVVKL+L +NNLQGPIP E+G+LA L
Sbjct:  125 MAQTDRKALVALYNATGGVKWKNNQNWNTSAALSQWYRV-EVNSQGRVVKLSLWNNNLQGPIPVEVGRLAVL 195

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BLAST of mRNA_S-firma_M_contig8926.19823.1 vs. uniprot
Match: A0A6H5KQQ0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQQ0_9PHAE)

HSP 1 Score: 92.8 bits (229), Expect = 1.900e-21
Identity = 46/72 (63.89%), Postives = 55/72 (76.39%), Query Frame = 0

Query:    1 MASSDRDALVALYNTTDGAKWTNKKNWNTNAPLSDWYGVNEVNGAGRVVKLNLSSNNLQGPIPPELGKLAAL 72
            MAS DRDALVAL+ +T GA WT + NWNT+A  + W+GV +VN  GRVV ++L SNNLQGPIP ELG LA L
Sbjct:    1 MASKDRDALVALFCSTGGAGWTRRDNWNTDADRATWFGV-KVNDQGRVVDVDLGSNNLQGPIPKELGALAKL 71

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BLAST of mRNA_S-firma_M_contig8926.19823.1 vs. uniprot
Match: D7FJV1_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJV1_ECTSI)

HSP 1 Score: 99.0 bits (245), Expect = 5.070e-21
Identity = 49/72 (68.06%), Postives = 56/72 (77.78%), Query Frame = 0

Query:    1 MASSDRDALVALYNTTDGAKWTNKKNWNTNAPLSDWYGVNEVNGAGRVVKLNLSSNNLQGPIPPELGKLAAL 72
            MAS+DRD LVALYN T+GA W N  NW T+A LS W+GV  VN  GRVV+L+LS NNL+G IPPELG LAAL
Sbjct:    1 MASTDRDVLVALYNATEGANWQNSINWGTDADLSQWFGVT-VNHQGRVVRLDLSFNNLRGHIPPELGNLAAL 71

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BLAST of mRNA_S-firma_M_contig8926.19823.1 vs. uniprot
Match: A0A6H5K3D6_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3D6_9PHAE)

HSP 1 Score: 90.1 bits (222), Expect = 1.200e-20
Identity = 45/70 (64.29%), Postives = 51/70 (72.86%), Query Frame = 0

Query:    3 SSDRDALVALYNTTDGAKWTNKKNWNTNAPLSDWYGVNEVNGAGRVVKLNLSSNNLQGPIPPELGKLAAL 72
            S+DR ALVAL+N T GA W     WNT+APL  WYGV EVN AGRVVKL+L  NNL+G IP +LG L AL
Sbjct:   10 STDRAALVALFNATGGANWKKNTKWNTDAPLGQWYGV-EVNDAGRVVKLSLRYNNLKGHIPRQLGDLGAL 78

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BLAST of mRNA_S-firma_M_contig8926.19823.1 vs. uniprot
Match: A0A6H5KQP2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQP2_9PHAE)

HSP 1 Score: 90.5 bits (223), Expect = 9.190e-20
Identity = 45/72 (62.50%), Postives = 55/72 (76.39%), Query Frame = 0

Query:    1 MASSDRDALVALYNTTDGAKWTNKKNWNTNAPLSDWYGVNEVNGAGRVVKLNLSSNNLQGPIPPELGKLAAL 72
            M S+DR+ALV+L+ +T GA W  + NW+T+A L+ W GVN VN  GRVV L+L  NNLQG IPPELGKLAAL
Sbjct:    1 MVSTDREALVSLFRSTGGAGWIRRDNWDTDADLATWNGVN-VNVQGRVVNLDLQYNNLQGSIPPELGKLAAL 71

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BLAST of mRNA_S-firma_M_contig8926.19823.1 vs. uniprot
Match: A0A6H5JX36_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JX36_9PHAE)

HSP 1 Score: 87.0 bits (214), Expect = 9.570e-20
Identity = 40/60 (66.67%), Postives = 48/60 (80.00%), Query Frame = 0

Query:    1 MASSDRDALVALYNTTDGAKWTNKKNWNTNAPLSDWYGVNEVNGAGRVVKLNLSSNNLQG 60
            MAS+DRDALVALYN T+G +W+  +NWNT APLS W+GV+ VN  GRVV L L+ NNLQG
Sbjct:    1 MASTDRDALVALYNATEGGRWSTNRNWNTGAPLSQWHGVH-VNDQGRVVALELAENNLQG 59

[Close]

BLAST of mRNA_S-firma_M_contig8926.19823.1 vs. uniprot
Match: D8LJS7_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJS7_ECTSI)

HSP 1 Score: 94.7 bits (234), Expect = 1.550e-19
Identity = 46/72 (63.89%), Postives = 57/72 (79.17%), Query Frame = 0

Query:    1 MASSDRDALVALYNTTDGAKWTNKKNWNTNAPLSDWYGVNEVNGAGRVVKLNLSSNNLQGPIPPELGKLAAL 72
            MAS+DR+AL+AL+  T G  W+ + NW T+A L+ W GV +VNG GRVVKL L++NNLQGPIPP LGKLAAL
Sbjct:    1 MASTDREALIALFRLTCGYGWSRRGNWGTDAELATWDGV-QVNGQGRVVKLGLAANNLQGPIPPALGKLAAL 71

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BLAST of mRNA_S-firma_M_contig8926.19823.1 vs. uniprot
Match: D7G3R3_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3R3_ECTSI)

HSP 1 Score: 93.2 bits (230), Expect = 2.790e-19
Identity = 45/72 (62.50%), Postives = 54/72 (75.00%), Query Frame = 0

Query:    1 MASSDRDALVALYNTTDGAKWTNKKNWNTNAPLSDWYGVNEVNGAGRVVKLNLSSNNLQGPIPPELGKLAAL 72
            MAS+DRDAL+ L++ T GA W  K NW T+  L  WYGV +VN  GRVVKL+L +NNLQG +PPELGKL AL
Sbjct:  282 MASADRDALITLFHETRGANWREKGNWGTSEVLGTWYGV-DVNAEGRVVKLSLYNNNLQGLLPPELGKLGAL 352

The following BLAST results are available for this feature:

BLAST of mRNA_S-firma_M_contig8926.19823.1 vs. uniprot

BLAST of mRNA_S-firma_M_contig8926.19823.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5KVC7_9PHAE	1.830e-24	70.83	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JFA4_9PHAE	2.120e-22	68.06	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7G496_ECTSI	5.170e-22	68.06	Hypothetical leucine rich repeat protein n=1 Tax=E...	[more]
A0A6H5KQQ0_9PHAE	1.900e-21	63.89	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7FJV1_ECTSI	5.070e-21	68.06	LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s...	[more]
A0A6H5K3D6_9PHAE	1.200e-20	64.29	Uncharacterized protein (Fragment) n=1 Tax=Ectocar...	[more]
A0A6H5KQP2_9PHAE	9.190e-20	62.50	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JX36_9PHAE	9.570e-20	66.67	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D8LJS7_ECTSI	1.550e-19	63.89	LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s...	[more]
D7G3R3_ECTSI	2.790e-19	62.50	Hypothetical leucine rich repeat protein n=1 Tax=E...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003591	Leucine-rich repeat, typical subtype	SMART	SM00369	LRR_typ_2	coord: 117..142 e-value: 15.0 score: 11.9 coord: 93..116 e-value: 20.0 score: 10.8 coord: 69..92 e-value: 210.0 score: 2.4
IPR032675	Leucine-rich repeat domain superfamily	GENE3D	3.80.10.10		coord: 2..149 e-value: 2.5E-40 score: 140.2
IPR001611	Leucine-rich repeat	PFAM	PF13855	LRR_8	coord: 72..130 e-value: 1.4E-9 score: 37.6
None	No IPR available	PANTHER	PTHR45631	FAMILY NOT NAMED	coord: 74..147
None	No IPR available	PANTHER	PTHR45631:SF19		coord: 74..147
None	No IPR available	PANTHER	PTHR45631	FAMILY NOT NAMED	coord: 3..111
None	No IPR available	PANTHER	PTHR45631:SF19		coord: 3..111
None	No IPR available	SUPERFAMILY	52058	L domain-like	coord: 4..136

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
S-firma_M_contig8926	contig	S-firma_M_contig8926:1284..4187 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male	2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90	2022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_S-firma_M_contig8926.19823.1	mRNA_S-firma_M_contig8926.19823.1	Sphaerotrichia firma Sfir_13m male	mRNA	S-firma_M_contig8926 1052..4202 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_S-firma_M_contig8926.19823.1 ID=prot_S-firma_M_contig8926.19823.1|Name=mRNA_S-firma_M_contig8926.19823.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=163bp
MASSDRDALVALYNTTDGAKWTNKKNWNTNAPLSDWYGVNEVNGAGRVVK
LNLSSNNLQGPIPPELGKLAALVELVLWSNQLSSPIPSELGHLSALKELY
LANNQLSGSIPPELGKLAALTTLDLRFNKLSGRVLAERLGSKAPVKLSLQ
AEEQVRNILPGI*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001611	Leu-rich_rpt
IPR032675	LRR_dom_sf
IPR003591	Leu-rich_rpt_typical-subtyp