prot_S-firma_M_contig8924.19821.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_M_contig8924.19821.1
Unique Nameprot_S-firma_M_contig8924.19821.1
Typepolypeptide
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length54
Homology
BLAST of mRNA_S-firma_M_contig8924.19821.1 vs. uniprot
Match: D7FTL9_ECTSI (Isoleucine--tRNA ligase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTL9_ECTSI)

HSP 1 Score: 114 bits (285), Expect = 2.900e-28
Identity = 50/53 (94.34%), Postives = 51/53 (96.23%), Query Frame = 0
Query:    1 SYPFCWRSDTPLIYKAVPSWFVAVESIRDKLLKNNAETYWVPSFVNEKRFQNW 53
            SYPFCWRSDTPLIYKAVPSWFV VESIRDKLLK NAETYWVP+FVNEKRFQNW
Sbjct:  417 SYPFCWRSDTPLIYKAVPSWFVGVESIRDKLLKANAETYWVPAFVNEKRFQNW 469          
BLAST of mRNA_S-firma_M_contig8924.19821.1 vs. uniprot
Match: F0YNH0_AURAN (Isoleucine--tRNA ligase n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YNH0_AURAN)

HSP 1 Score: 107 bits (267), Expect = 7.840e-26
Identity = 45/53 (84.91%), Postives = 50/53 (94.34%), Query Frame = 0
Query:    1 SYPFCWRSDTPLIYKAVPSWFVAVESIRDKLLKNNAETYWVPSFVNEKRFQNW 53
            SYPFCWRSDTPLIYKAVPSWFVAVE+I+DKL+KNNA+TYWVP+ V EKRF NW
Sbjct:  405 SYPFCWRSDTPLIYKAVPSWFVAVEAIKDKLIKNNAQTYWVPASVKEKRFHNW 457          
BLAST of mRNA_S-firma_M_contig8924.19821.1 vs. uniprot
Match: A0A7S3PSJ2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PSJ2_9STRA)

HSP 1 Score: 101 bits (251), Expect = 1.060e-25
Identity = 42/53 (79.25%), Postives = 47/53 (88.68%), Query Frame = 0
Query:    1 SYPFCWRSDTPLIYKAVPSWFVAVESIRDKLLKNNAETYWVPSFVNEKRFQNW 53
            SYPFCWRSDTPLIYKAVPSWFVAVE I+ +L++NN +TYWVP FV EKRF NW
Sbjct:   74 SYPFCWRSDTPLIYKAVPSWFVAVEEIKTQLVENNKKTYWVPDFVKEKRFHNW 126          
BLAST of mRNA_S-firma_M_contig8924.19821.1 vs. uniprot
Match: UPI00064DA37F (probable isoleucine--tRNA ligase, cytoplasmic n=1 Tax=Erythranthe guttata TaxID=4155 RepID=UPI00064DA37F)

HSP 1 Score: 105 bits (263), Expect = 2.720e-25
Identity = 44/53 (83.02%), Postives = 48/53 (90.57%), Query Frame = 0
Query:    1 SYPFCWRSDTPLIYKAVPSWFVAVESIRDKLLKNNAETYWVPSFVNEKRFQNW 53
            SYPFCWRSDTPLIY+AVPSWFVAVE I+DKLL+NN +TYWVP FV EKRF NW
Sbjct:  421 SYPFCWRSDTPLIYRAVPSWFVAVEKIKDKLLENNKQTYWVPDFVKEKRFHNW 473          
BLAST of mRNA_S-firma_M_contig8924.19821.1 vs. uniprot
Match: A0A250X1S9_9CHLO (Isoleucine--tRNA ligase n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250X1S9_9CHLO)

HSP 1 Score: 105 bits (263), Expect = 2.720e-25
Identity = 44/53 (83.02%), Postives = 49/53 (92.45%), Query Frame = 0
Query:    1 SYPFCWRSDTPLIYKAVPSWFVAVESIRDKLLKNNAETYWVPSFVNEKRFQNW 53
            SYPFCWRSDTPLIY+AVPSWFV VESI+DKL++NN ETYWVPS+V EKRF NW
Sbjct:  407 SYPFCWRSDTPLIYRAVPSWFVNVESIKDKLVQNNVETYWVPSYVKEKRFHNW 459          
BLAST of mRNA_S-firma_M_contig8924.19821.1 vs. uniprot
Match: A0A7S0YDE2_9CHLO (Isoleucine--tRNA ligase n=2 Tax=Polytomella parva TaxID=51329 RepID=A0A7S0YDE2_9CHLO)

HSP 1 Score: 105 bits (261), Expect = 5.070e-25
Identity = 43/52 (82.69%), Postives = 48/52 (92.31%), Query Frame = 0
Query:    2 YPFCWRSDTPLIYKAVPSWFVAVESIRDKLLKNNAETYWVPSFVNEKRFQNW 53
            YPFCWRSDTPLIY+AVPSWFV VE I+D+LLKNNA+TYWVP+FV EKRF NW
Sbjct:  508 YPFCWRSDTPLIYRAVPSWFVKVEEIKDRLLKNNAQTYWVPNFVKEKRFHNW 559          
BLAST of mRNA_S-firma_M_contig8924.19821.1 vs. uniprot
Match: A0A484MTU8_9ASTE (Isoleucine--tRNA ligase n=5 Tax=Convolvulaceae TaxID=4118 RepID=A0A484MTU8_9ASTE)

HSP 1 Score: 104 bits (260), Expect = 6.920e-25
Identity = 43/53 (81.13%), Postives = 48/53 (90.57%), Query Frame = 0
Query:    1 SYPFCWRSDTPLIYKAVPSWFVAVESIRDKLLKNNAETYWVPSFVNEKRFQNW 53
            SYPFCWRSDTPLIY+AVPSWFV+VE I+D+LLKNN ETYWVP FV +KRF NW
Sbjct:  427 SYPFCWRSDTPLIYRAVPSWFVSVEKIKDQLLKNNKETYWVPDFVKDKRFHNW 479          
BLAST of mRNA_S-firma_M_contig8924.19821.1 vs. uniprot
Match: A0A068UWU0_COFCA (Isoleucine--tRNA ligase n=3 Tax=Coffea TaxID=13442 RepID=A0A068UWU0_COFCA)

HSP 1 Score: 104 bits (259), Expect = 9.450e-25
Identity = 43/53 (81.13%), Postives = 48/53 (90.57%), Query Frame = 0
Query:    1 SYPFCWRSDTPLIYKAVPSWFVAVESIRDKLLKNNAETYWVPSFVNEKRFQNW 53
            SYPFCWRSDTPLIY+AVPSWFVAVE I+D+LL+NN +TYWVP FV EKRF NW
Sbjct:  428 SYPFCWRSDTPLIYRAVPSWFVAVEKIKDQLLENNKQTYWVPDFVKEKRFHNW 480          
BLAST of mRNA_S-firma_M_contig8924.19821.1 vs. uniprot
Match: L1JGM6_GUITC (Isoleucine--tRNA ligase n=2 Tax=Guillardia theta TaxID=55529 RepID=L1JGM6_GUITC)

HSP 1 Score: 103 bits (258), Expect = 1.290e-24
Identity = 45/53 (84.91%), Postives = 48/53 (90.57%), Query Frame = 0
Query:    1 SYPFCWRSDTPLIYKAVPSWFVAVESIRDKLLKNNAETYWVPSFVNEKRFQNW 53
            SYPFCWRSDTPLIYKAVP+WFV VESI+DKLL NNA+T WVPSFV EKRF NW
Sbjct:  400 SYPFCWRSDTPLIYKAVPNWFVNVESIKDKLLANNAKTEWVPSFVKEKRFHNW 452          
BLAST of mRNA_S-firma_M_contig8924.19821.1 vs. uniprot
Match: D8S9D7_SELML (Isoleucine--tRNA ligase n=5 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8S9D7_SELML)

HSP 1 Score: 103 bits (257), Expect = 1.760e-24
Identity = 43/53 (81.13%), Postives = 47/53 (88.68%), Query Frame = 0
Query:    1 SYPFCWRSDTPLIYKAVPSWFVAVESIRDKLLKNNAETYWVPSFVNEKRFQNW 53
            SYPFCWRS+TPLIYKAVPSWFV VE +RD+LL+N AETYWVP FV EKRF NW
Sbjct:  410 SYPFCWRSETPLIYKAVPSWFVKVEELRDRLLQNTAETYWVPDFVKEKRFHNW 462          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig8924.19821.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FTL9_ECTSI2.900e-2894.34Isoleucine--tRNA ligase n=2 Tax=Ectocarpus TaxID=2... [more]
F0YNH0_AURAN7.840e-2684.91Isoleucine--tRNA ligase n=1 Tax=Aureococcus anopha... [more]
A0A7S3PSJ2_9STRA1.060e-2579.25Hypothetical protein (Fragment) n=1 Tax=Aplanochyt... [more]
UPI00064DA37F2.720e-2583.02probable isoleucine--tRNA ligase, cytoplasmic n=1 ... [more]
A0A250X1S9_9CHLO2.720e-2583.02Isoleucine--tRNA ligase n=1 Tax=Chlamydomonas eust... [more]
A0A7S0YDE2_9CHLO5.070e-2582.69Isoleucine--tRNA ligase n=2 Tax=Polytomella parva ... [more]
A0A484MTU8_9ASTE6.920e-2581.13Isoleucine--tRNA ligase n=5 Tax=Convolvulaceae Tax... [more]
A0A068UWU0_COFCA9.450e-2581.13Isoleucine--tRNA ligase n=3 Tax=Coffea TaxID=13442... [more]
L1JGM6_GUITC1.290e-2484.91Isoleucine--tRNA ligase n=2 Tax=Guillardia theta T... [more]
D8S9D7_SELML1.760e-2481.13Isoleucine--tRNA ligase n=5 Tax=Selaginella moelle... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014729Rossmann-like alpha/beta/alpha sandwich foldGENE3D3.40.50.620coord: 1..53
e-value: 4.3E-15
score: 57.3
IPR002300Aminoacyl-tRNA synthetase, class IaPFAMPF00133tRNA-synt_1coord: 1..53
e-value: 5.2E-15
score: 54.7
NoneNo IPR availablePANTHERPTHR42780FAMILY NOT NAMEDcoord: 1..53
NoneNo IPR availableSUPERFAMILY52374Nucleotidylyl transferasecoord: 2..53

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig8924contigS-firma_M_contig8924:3645..3806 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig8924.19821.1mRNA_S-firma_M_contig8924.19821.1Sphaerotrichia firma Sfir_13m malemRNAS-firma_M_contig8924 3645..3806 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_M_contig8924.19821.1 ID=prot_S-firma_M_contig8924.19821.1|Name=mRNA_S-firma_M_contig8924.19821.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=54bp
SYPFCWRSDTPLIYKAVPSWFVAVESIRDKLLKNNAETYWVPSFVNEKRF
QNW*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002300aa-tRNA-synth_Ia
IPR014729Rossmann-like_a/b/a_fold