prot_S-firma_M_contig892.19817.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_M_contig892.19817.1
Unique Nameprot_S-firma_M_contig892.19817.1
Typepolypeptide
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length191
Homology
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BLAST of mRNA_S-firma_M_contig892.19817.1 vs. uniprot
Match: D7FMF8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMF8_ECTSI)

HSP 1 Score: 306 bits (784), Expect = 3.490e-104
Identity = 150/184 (81.52%), Postives = 165/184 (89.67%), Query Frame = 0 
Query:    1 MAQVALAQGVEFDTSLALRAKVLSLYSLDTNTDAVIAEAYHHRCKFVDPLVSTRGHREIKAQFRGLRAFLRQSKAELISSHFDVLSRTLTMDTMMVFKPKLWPFSSFRLRSFTVVVVGTDGLVRNHTDHWSVASLLESKIGWLYRAGRRAFGAATSILLGWLTKDSTPLILQGHAPSAPPMAEA 184
            M Q  L QGV+FDTSLALR KVLSLYSLDTNTDAVI+EAYH RCKFVDP+VSTRGHRE+KAQFR LRAFLR SKAEL+SSH+DVLS TLTMDT MVFKPKLWPFSSFRL+ FTVVVVG+DGLVR+HTDHWSVASLLE+KIGW+YRAGRR FGA TS+L GWLTKDSTPL+L    P+APP+ EA
Sbjct:    1 MDQSTLIQGVQFDTSLALRGKVLSLYSLDTNTDAVISEAYHRRCKFVDPIVSTRGHREVKAQFRSLRAFLRFSKAELVSSHYDVLSSTLTMDTTMVFKPKLWPFSSFRLKCFTVVVVGSDGLVRSHTDHWSVASLLETKIGWMYRAGRRLFGAVTSVLFGWLTKDSTPLVLAERVPTAPPVVEA 184
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BLAST of mRNA_S-firma_M_contig892.19817.1 vs. uniprot
Match: A0A836CFR4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFR4_9STRA)

HSP 1 Score: 73.6 bits (179), Expect = 5.480e-13
Identity = 49/140 (35.00%), Postives = 73/140 (52.14%), Query Frame = 0 
Query:   22 VLSLYSLDTNTDAVIAEAYHHRCKFVDPLVSTRGHREIKAQFRGLRAFLRQSKAELISSHFDV--LSRTLTMDTMMVFKPKLWPFSSFRLRSFTVVVVGTDGLVRNHTDHWSVASLLESK--IGWLYRAGRRAFGAATSI 157
            +LS     T+TD+VI++ Y   C F DPL+  +G   +KAQFR L+  L++   + ISS         T  +  +MV +P LWP+      +  + V    GL+  HTDHWS+ASLL +   +  L    R  FG  +S+
Sbjct:   24 LLSHPDSSTDTDSVISDNYAPNCVFQDPLLKVKGISNVKAQFRLLKVMLKRIDDKFISSGVAAGEAEGTSIITHIMVLRPLLWPWDINIEVTTHMRVDRATGLICEHTDHWSIASLLANVPLLNRLADVSRTLFGTVSSM 163
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig892.19817.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FMF8_ECTSI3.490e-10481.52Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CFR4_9STRA5.480e-1335.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.10.450.50coord: 20..133
e-value: 1.5E-6
score: 30.1
IPR032710NTF2-like domain superfamilySUPERFAMILY54427NTF2-likecoord: 33..137

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig892contigS-firma_M_contig892:18511..21430 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig892.19817.1mRNA_S-firma_M_contig892.19817.1Sphaerotrichia firma Sfir_13m malemRNAS-firma_M_contig892 18511..21756 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_M_contig892.19817.1 ID=prot_S-firma_M_contig892.19817.1|Name=mRNA_S-firma_M_contig892.19817.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=191bp
MAQVALAQGVEFDTSLALRAKVLSLYSLDTNTDAVIAEAYHHRCKFVDPL
VSTRGHREIKAQFRGLRAFLRQSKAELISSHFDVLSRTLTMDTMMVFKPK
LWPFSSFRLRSFTVVVVGTDGLVRNHTDHWSVASLLESKIGWLYRAGRRA
FGAATSILLGWLTKDSTPLILQGHAPSAPPMAEAYGAKAD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032710NTF2-like_dom_sf