prot_S-firma_M_contig8911.19809.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_M_contig8911.19809.1
Unique Nameprot_S-firma_M_contig8911.19809.1
Typepolypeptide
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length227
Homology
BLAST of mRNA_S-firma_M_contig8911.19809.1 vs. uniprot
Match: A0A6H5JAU5_9PHAE (Thioredoxin domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAU5_9PHAE)

HSP 1 Score: 249 bits (637), Expect = 2.620e-77
Identity = 120/133 (90.23%), Postives = 124/133 (93.23%), Query Frame = 0
Query:   70 AATNLSHIVHHMSFGVDPPRRVQTKINRLTEDLRQNAPLDGNVYIAPEYHQAPHHYIRVVGSAYQLSSMKTPWHGYQAVANSQMMLYDEEEVPEARFAYNISPMSVLVRSEKRPWYDFVTKVLAIVGGTFSVV 202
            A TNLSHIVHHMSFG DPPRR QTKINRLTEDLRQNAPLDGNVYIA  YHQAPHHY+RVVGS Y L+ MKTPWHGYQ VANSQMMLYDEEEVPEARF+YNISPMSVLVRSEKRPWYDFVTKVLAIVGGTFS+V
Sbjct:  339 ATTNLSHIVHHMSFGNDPPRRTQTKINRLTEDLRQNAPLDGNVYIANAYHQAPHHYLRVVGSMYHLNPMKTPWHGYQMVANSQMMLYDEEEVPEARFSYNISPMSVLVRSEKRPWYDFVTKVLAIVGGTFSMV 471          
BLAST of mRNA_S-firma_M_contig8911.19809.1 vs. uniprot
Match: D8LK23_ECTSI (DEAD box helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK23_ECTSI)

HSP 1 Score: 250 bits (639), Expect = 2.090e-74
Identity = 120/133 (90.23%), Postives = 124/133 (93.23%), Query Frame = 0
Query:   70 AATNLSHIVHHMSFGVDPPRRVQTKINRLTEDLRQNAPLDGNVYIAPEYHQAPHHYIRVVGSAYQLSSMKTPWHGYQAVANSQMMLYDEEEVPEARFAYNISPMSVLVRSEKRPWYDFVTKVLAIVGGTFSVV 202
            A TNLSHIVHHMSFG DPPRR QTKINRLTEDLRQNAPLDGNVY+A  YHQAPHHY+RVVGS Y LS MKTPWHGYQ VANSQMMLYDEEEVPEARF+YNISPMSVLVRSEKRPWYDFVTKVLAIVGGTFS+V
Sbjct:  714 ATTNLSHIVHHMSFGNDPPRRTQTKINRLTEDLRQNAPLDGNVYVANAYHQAPHHYLRVVGSMYHLSPMKTPWHGYQIVANSQMMLYDEEEVPEARFSYNISPMSVLVRSEKRPWYDFVTKVLAIVGGTFSMV 846          
BLAST of mRNA_S-firma_M_contig8911.19809.1 vs. uniprot
Match: F0YJN8_AURAN (Thioredoxin domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YJN8_AURAN)

HSP 1 Score: 134 bits (337), Expect = 2.170e-34
Identity = 65/136 (47.79%), Postives = 97/136 (71.32%), Query Frame = 0
Query:   70 AATNLSHIVHHMSFGVDPPRRVQTKINRLTEDLRQNAPLDGNVYIAPEYHQAPHHYIRVVGSAYQLSSMKTPWH---GYQAVANSQMMLYDEEEVPEARFAYNISPMSVLVRSEKRPWYDFVTKVLAIVGGTFSVV 202
            A TNLSH+V+H+SFG    + +Q K+++  +  +   PLDG ++++ +YHQ  HHY +VV + +++  M T      GYQ +A SQ+M Y+E +VPEA+F+Y++SPM+VLV S+ R WYDFVT V AI+GGTF+VV
Sbjct:  173 AMTNLSHVVNHLSFGTPLAKDMQRKVSKYPQ-FQSVHPLDGGIFVSRDYHQVHHHYSKVVSTHFEVGGMMTKSREIVGYQMLAQSQIMHYNEMDVPEAKFSYDLSPMAVLVSSKGRRWYDFVTSVCAIIGGTFTVV 307          
BLAST of mRNA_S-firma_M_contig8911.19809.1 vs. uniprot
Match: A0A7S2B692_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2B692_9STRA)

HSP 1 Score: 135 bits (340), Expect = 6.040e-34
Identity = 66/136 (48.53%), Postives = 96/136 (70.59%), Query Frame = 0
Query:   70 AATNLSHIVHHMSFGVDPPRRVQTKINRLTEDLRQNAPLDGNVYIAPEYHQAPHHYIRVVGSAYQLSSM---KTPWHGYQAVANSQMMLYDEEEVPEARFAYNISPMSVLVRSEKRPWYDFVTKVLAIVGGTFSVV 202
            A TNLSHIV+H+SFG  P  ++Q +  +   +    APLDGNVY+  +YHQA HH+ +VV + Y++  M   K    GYQ +  +Q+M Y E++VPEA+F+Y++SPM+V+V S+ R WYDF+T + AI+GGTF+VV
Sbjct:  285 AMTNLSHIVNHLSFG-QPLNQIQKRKMKKFPEYTSTAPLDGNVYVNKDYHQAHHHFSKVVSTHYEVDGMLSRKNRIMGYQMITQNQIMHYKEDDVPEAKFSYDLSPMAVVVTSKGRRWYDFLTSLCAIIGGTFTVV 419          
BLAST of mRNA_S-firma_M_contig8911.19809.1 vs. uniprot
Match: A0A7S2RKA3_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RKA3_9STRA)

HSP 1 Score: 132 bits (333), Expect = 9.350e-33
Identity = 67/137 (48.91%), Postives = 91/137 (66.42%), Query Frame = 0
Query:   70 AATNLSHIVHHMSFGVDPPRRVQTKINRLTEDLRQNAPLDGNVYIAPEYHQAPHHYIRVVGSAY----QLSSMKTPWHGYQAVANSQMMLYDEEEVPEARFAYNISPMSVLVRSEKRPWYDFVTKVLAIVGGTFSVV 202
            A TNLSHIV+H+SFG       + K+ +  E    +APLDGN Y+ PEYHQ  HH+ +VV + Y    +         GYQ ++ SQMM Y E+EVPEA+F+Y++SPM+V+V +  R WYDFVT + AI+GGTF+VV
Sbjct:  312 AMTNLSHIVNHLSFGSPLLVNQKKKLKKFQEYFSNSAPLDGNAYVNPEYHQVFHHFSKVVSTQYSPPGKFFGKPKNILGYQMLSESQMMHYQEQEVPEAKFSYDLSPMAVVVSTTGRRWYDFVTSLCAIIGGTFTVV 448          
BLAST of mRNA_S-firma_M_contig8911.19809.1 vs. uniprot
Match: A0A7S3ZRX9_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZRX9_9STRA)

HSP 1 Score: 130 bits (328), Expect = 4.370e-32
Identity = 64/136 (47.06%), Postives = 94/136 (69.12%), Query Frame = 0
Query:   70 AATNLSHIVHHMSFGVDPPRRVQTKINRLTEDLRQNAPLDGNVYIAPEYHQAPHHYIRVVGSAYQLSSMKTPWHG---YQAVANSQMMLYDEEEVPEARFAYNISPMSVLVRSEKRPWYDFVTKVLAIVGGTFSVV 202
            A TNLSH+V+H+SFG       + K+++  +  + N PLDG  +I+P++HQA HHY +VV + +Q+  + +       YQ +  SQ+M Y E +VPEA+FAY++SPM+V+V S+ R WYDFVT V AIVGGTF+V+
Sbjct:  306 AMTNLSHVVNHLSFGTPLASSTERKLSKYAQ-FQANYPLDGGRFISPDFHQAHHHYSKVVSTHFQVGGLMSKMRDVIRYQTLVQSQVMHYSEMDVPEAKFAYDLSPMAVVVSSKGRRWYDFVTSVCAIVGGTFTVL 440          
BLAST of mRNA_S-firma_M_contig8911.19809.1 vs. uniprot
Match: A0A7S3JS36_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JS36_9STRA)

HSP 1 Score: 130 bits (328), Expect = 5.090e-32
Identity = 61/134 (45.52%), Postives = 92/134 (68.66%), Query Frame = 0
Query:   72 TNLSHIVHHMSFGVDPPRRVQTKINRLTEDLRQNAPLDGNVYIAPEYHQAPHHYIRVVGSAYQLSSMKTPWH---GYQAVANSQMMLYDEEEVPEARFAYNISPMSVLVRSEKRPWYDFVTKVLAIVGGTFSVV 202
            TNLSH+V+H+SFG    + +  K++      ++N PLD  ++I  ++HQA HHY +VV + +++  M +      GYQ ++ SQ+M YD E VPEA+F+Y++SPM+V+V S+ R WYDFVT V AI+GGTF+ V
Sbjct:  319 TNLSHVVNHLSFGTPLSKDLARKVSHYFPQFQENHPLDNGIFINKQFHQAHHHYSKVVSTHFEVGGMMSKTREVVGYQMLSQSQIMQYDIEAVPEAKFSYDLSPMAVIVSSKGRRWYDFVTSVCAIIGGTFTTV 452          
BLAST of mRNA_S-firma_M_contig8911.19809.1 vs. uniprot
Match: A0A448Z7R2_9STRA (Thioredoxin domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z7R2_9STRA)

HSP 1 Score: 126 bits (317), Expect = 2.160e-30
Identity = 64/138 (46.38%), Postives = 95/138 (68.84%), Query Frame = 0
Query:   70 AATNLSHIVHHMSFGVDP----PRRVQTKINRLTEDLRQNAPLDGNVYIAPEYHQAPHHYIRVVGSAYQL-SSMKTPWHGYQAVANSQMMLYDEEEVPEARFAYNISPMSVLVRSEKRPWYDFVTKVLAIVGGTFSVV 202
            A TNL+HIV+H+SFG DP     RR +  + ++ ED RQ  P+D ++Y+  E+HQA HHYI+VV +   + +++      YQ +  SQ++ YDE  VPEARF+Y++SPMSV+V  E R WYD++T + AI+GGTF+ +
Sbjct:  330 AMTNLTHIVNHLSFG-DPIDQKSRRAKRILKQVPEDHRQFNPMDDSLYVTKEFHQAYHHYIKVVSTHLNMGTALANQMLTYQFLEQSQIVYYDETNVPEARFSYDLSPMSVVVEKEGRKWYDYLTSLCAIIGGTFTTL 466          
BLAST of mRNA_S-firma_M_contig8911.19809.1 vs. uniprot
Match: A0A7S4KAX2_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4KAX2_9STRA)

HSP 1 Score: 119 bits (297), Expect = 2.310e-30
Identity = 57/133 (42.86%), Postives = 88/133 (66.17%), Query Frame = 0
Query:   73 NLSHIVHHMSFGV---DPPRRVQTKINRLTEDLRQNAPLDGNVYIAPEYHQAPHHYIRVVGSAYQLSSMKTPWHGYQAVANSQMMLYDEEEVPEARFAYNISPMSVLVRSEKRPWYDFVTKVLAIVGGTFSVV 202
            NLSH V+H+SFGV   D  R  +  ++R  ++ ++  PLDG V+   E+HQA HHY++VV + + ++    P   YQ +  SQ++ YD   VPEARF+Y++SPM+V V +E R WYD++T + AI+GG F+ +
Sbjct:    3 NLSHFVNHLSFGVGSDDRDRNAKRILSRAPQEHQKFTPLDGKVFTTTEFHQAYHHYVKVVPTVFDMND--EPLTVYQLIGQSQVVFYDVVNVPEARFSYDLSPMTVHVSTEGRKWYDYITSLCAIIGGAFTTL 133          
BLAST of mRNA_S-firma_M_contig8911.19809.1 vs. uniprot
Match: A0A7S0AES5_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0AES5_9STRA)

HSP 1 Score: 120 bits (300), Expect = 4.760e-30
Identity = 60/136 (44.12%), Postives = 90/136 (66.18%), Query Frame = 0
Query:   70 AATNLSHIVHHMSFGVDP---PRRVQTKINRLTEDLRQNAPLDGNVYIAPEYHQAPHHYIRVVGSAYQLSSMKTPWHGYQAVANSQMMLYDEEEVPEARFAYNISPMSVLVRSEKRPWYDFVTKVLAIVGGTFSVV 202
            A TNL+H V+H+SFG       R ++  +  L E+ +Q +P+DG +Y   +YHQA HHYI+VV +   ++        YQ +  SQ++ YDE  VPEARF+Y++SPMSV+V+ E R WYD++T + AI+GGTF+ +
Sbjct:   63 AMTNLTHRVNHLSFGAPDFTASRNMKRILKTLPEEHQQFSPMDGTMYHTSKYHQAYHHYIKVVSTHLDMAGNTET--AYQFLEQSQIVYYDEVNVPEARFSYDLSPMSVVVKREGRKWYDYLTSLCAIIGGTFTTL 196          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig8911.19809.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JAU5_9PHAE2.620e-7790.23Thioredoxin domain-containing protein n=1 Tax=Ecto... [more]
D8LK23_ECTSI2.090e-7490.23DEAD box helicase n=1 Tax=Ectocarpus siliculosus T... [more]
F0YJN8_AURAN2.170e-3447.79Thioredoxin domain-containing protein n=1 Tax=Aure... [more]
A0A7S2B692_9STRA6.040e-3448.53Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S2RKA3_9STRA9.350e-3348.91Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S3ZRX9_9STRA4.370e-3247.06Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S3JS36_9STRA5.090e-3245.52Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A448Z7R2_9STRA2.160e-3046.38Thioredoxin domain-containing protein n=1 Tax=Pseu... [more]
A0A7S4KAX2_9STRA2.310e-3042.86Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A7S0AES5_9STRA4.760e-3044.12Hypothetical protein n=1 Tax=Minutocellus polymorp... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012936Endoplasmic reticulum vesicle transporter, C-terminalPFAMPF07970COPIIcoated_ERVcoord: 68..203
e-value: 1.5E-17
score: 64.2
NoneNo IPR availablePANTHERPTHR10984:SF37PROTEIN DISULFIDE-ISOMERASE 5-3coord: 67..204
NoneNo IPR availablePANTHERPTHR10984ENDOPLASMIC RETICULUM-GOLGI INTERMEDIATE COMPARTMENT PROTEINcoord: 67..204

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig8911contigS-firma_M_contig8911:761..3893 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig8911.19809.1mRNA_S-firma_M_contig8911.19809.1Sphaerotrichia firma Sfir_13m malemRNAS-firma_M_contig8911 281..3954 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_M_contig8911.19809.1 ID=prot_S-firma_M_contig8911.19809.1|Name=mRNA_S-firma_M_contig8911.19809.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=227bp
MVWILPSTIYYLRRMMWILRSTIYDAWCGSYHLPSTIYDAWCGSYHLPST
IYDAWCGSYHLPSAFPARQAATNLSHIVHHMSFGVDPPRRVQTKINRLTE
DLRQNAPLDGNVYIAPEYHQAPHHYIRVVGSAYQLSSMKTPWHGYQAVAN
SQMMLYDEEEVPEARFAYNISPMSVLVRSEKRPWYDFVTKVLAIVGGTFS
VVSTSQPLPAGSVRRTRFCSLCKHVS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012936Erv_C