prot_S-firma_M_contig8891.19776.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_M_contig8891.19776.1
Unique Nameprot_S-firma_M_contig8891.19776.1
Typepolypeptide
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length212
Homology
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BLAST of mRNA_S-firma_M_contig8891.19776.1 vs. uniprot
Match: D8LIZ3_ECTSI (Kinesin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIZ3_ECTSI)

HSP 1 Score: 79.7 bits (195), Expect = 1.030e-13
Identity = 58/145 (40.00%), Postives = 66/145 (45.52%), Query Frame = 0 
Query:    1 MQAEFQAWYEPLVGSAEDGEGGEAPQATTGLGGXXXGIKPKPRHLDHNNTHPRAXXXXXXXXXXXXXXXSVGSLDNQQHAVATPTXXXXXXXXXDASERIRLDGGGTTPTRRPRPPVDAWGTPPASVSHRRGQGSTSSAMTGSVS 145
            MQA+FQAWYEPL  S E+ +G  A +    LG    G KPK +     +  PR                        + AV   T          A +    DG   TPTRRPRPPVDAWGTPP S S RRG    SS  TGSVS
Sbjct:  761 MQADFQAWYEPLACSVEEEDGAVASEGNCALG--EGGTKPKAQSFGGGDDKPRGAHHHAP--------------QGHRQAVVGKTTRERQSEEPAAFDGSGKDGA-NTPTRRPRPPVDAWGTPPDSTSRRRGP--LSSVATGSVS 886
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BLAST of mRNA_S-firma_M_contig8891.19776.1 vs. uniprot
Match: A0A6H5KY72_9PHAE (Kinesin motor domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY72_9PHAE)

HSP 1 Score: 76.3 bits (186), Expect = 1.610e-12
Identity = 59/149 (39.60%), Postives = 69/149 (46.31%), Query Frame = 0 
Query:    1 MQAEFQAWYEPLVGSAEDGEGGEAPQATTGLGGXXXGIKPKPRHLDHNNTHPRAXXXXXXXXXXXXXXXSVGSLDNQQHAVATPTXXXXXXXXXDASERIRLDGGG----TTPTRRPRPPVDAWGTPPASVSHRRGQGSTSSAMTGSVS 145
            MQA+FQAWYEPL  S E+ +G  A + +  LG    G K         + +PR                      ++Q  V   T            E +  DG G     TPTRRPRPPVDAWGTPPAS SHRRG  S  S  TGSVS
Sbjct:  825 MQADFQAWYEPLACSVEEKDGAVASEGSHLLG---EGEKKPTAQSFCGDDNPRTAHHPAPQG-------------HRQAVVGRTTRER------QCEESVAFDGSGKDEANTPTRRPRPPVDAWGTPPASTSHRRG--SPISTATGSVS 949
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig8891.19776.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LIZ3_ECTSI1.030e-1340.00Kinesin-like protein n=1 Tax=Ectocarpus siliculosu... [more]
A0A6H5KY72_9PHAE1.610e-1239.60Kinesin motor domain-containing protein n=1 Tax=Ec... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 179..199

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig8891contigS-firma_M_contig8891:1427..2295 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig8891.19776.1mRNA_S-firma_M_contig8891.19776.1Sphaerotrichia firma Sfir_13m malemRNAS-firma_M_contig8891 329..3090 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_M_contig8891.19776.1 ID=prot_S-firma_M_contig8891.19776.1|Name=mRNA_S-firma_M_contig8891.19776.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=212bp
MQAEFQAWYEPLVGSAEDGEGGEAPQATTGLGGGGGGIKPKPRHLDHNNT
HPRAAAAAAAHHHPPPNNNSVGSLDNQQHAVATPTPSTARERERDASERI
RLDGGGTTPTRRPRPPVDAWGTPPASVSHRRGQGSTSSAMTGSVSSGGGG
GGSVATGGGRGALHGGAGGGGLLPPLTGNKEADDDIAAFYRAKEELERRK
SATARNGDTSY*
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