prot_S-firma_M_contig887.19754.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_M_contig887.19754.1
Unique Nameprot_S-firma_M_contig887.19754.1
Typepolypeptide
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length104
Homology
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BLAST of mRNA_S-firma_M_contig887.19754.1 vs. uniprot
Match: A0A6H5KUY9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUY9_9PHAE)

HSP 1 Score: 51.2 bits (121), Expect = 3.500e-5
Identity = 32/54 (59.26%), Postives = 34/54 (62.96%), Query Frame = 0 
Query:   21 GVNKAKQRGYERAKTKQSPFWLHSTGRSPNAPP-SWSAHPREAAALLSFLFSWA 73
            G     QR  ER   K+SPF   S   S NAPP SWSAHPRE A+LLS LFSWA
Sbjct: 1998 GAGACGQRDEER---KRSPFSDVSRQGSRNAPPPSWSAHPREVASLLSLLFSWA 2048
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig887.19754.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KUY9_9PHAE3.500e-559.26Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig887contigS-firma_M_contig887:21855..22166 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig887.19754.1mRNA_S-firma_M_contig887.19754.1Sphaerotrichia firma Sfir_13m malemRNAS-firma_M_contig887 21855..22166 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_M_contig887.19754.1 ID=prot_S-firma_M_contig887.19754.1|Name=mRNA_S-firma_M_contig887.19754.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=104bp
VTSNSTERVGSEPRDCQAAGGVNKAKQRGYERAKTKQSPFWLHSTGRSPN
APPSWSAHPREAAALLSFLFSWAKGGGDDDERGGHPTAHAKRGALEAEVA
QDTE
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