prot_S-firma_M_contig887.19751.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_M_contig887.19751.1
Unique Nameprot_S-firma_M_contig887.19751.1
Typepolypeptide
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length295
Homology
BLAST of mRNA_S-firma_M_contig887.19751.1 vs. uniprot
Match: D8LDV9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDV9_ECTSI)

HSP 1 Score: 411 bits (1057), Expect = 2.540e-142
Identity = 222/295 (75.25%), Postives = 245/295 (83.05%), Query Frame = 0
Query:    1 MRIATAVPLLVALLGVSS-IEGRTIARSGKSLP-----TQQHQ-------HLSQL-RLSQLRGGGCAAAVGSTAARRGAGADGLVTRVRGGRTSDAVVLVEALVETALESGLIIGFVGAAEYLAVRYLAGATEKFSEVARLALWTAAVFASGAATAGPKRWLDKSQLFNIDVPIGTDWYANLRKPWFNPPNWVFPIMWIPLKILQVFACYEMWDKLEGRSCLAAPVVVYAVYKSLGDVWNKVFFERRRLRMGTVVISLYFASLLAGIKLFFDVSDRAGYLFAPTAAWVTIATCLQ 281
            MR ATAVP+LVALLG SS ++GR +A SG  +      +QQ Q        L+QL RLSQ+RGG   A + +T    GA  +  +TR+RGGRTSD VVLVEALVETALESGLI+GFVGAAEYLA RYL+    KFSEVARLALWTAAVF SGAATAGPK+WL+KSQLFNIDVPIG DWY NLRKP +NPPNWVFPIMWIPLKILQVFACYEMWDKLE RSC+A PVVVY VYKSLGDVWNKVFFERRRL+MGTVVISLY+ +LLAGIK+FFDVSDRAGYLFAPTAAWVTIATCLQ
Sbjct:    1 MRFATAVPVLVALLGQSSSVQGRHVAHSGSRVAVAGRKSQQQQPNGASRQQLAQLQRLSQVRGG---ATLSATVVTAGATGEDRLTRMRGGRTSDTVVLVEALVETALESGLIVGFVGAAEYLAARYLSDT--KFSEVARLALWTAAVFVSGAATAGPKKWLEKSQLFNIDVPIGKDWYTNLRKPRWNPPNWVFPIMWIPLKILQVFACYEMWDKLETRSCVALPVVVYTVYKSLGDVWNKVFFERRRLKMGTVVISLYYLTLLAGIKVFFDVSDRAGYLFAPTAAWVTIATCLQ 290          
BLAST of mRNA_S-firma_M_contig887.19751.1 vs. uniprot
Match: A0A835YIB6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIB6_9STRA)

HSP 1 Score: 126 bits (316), Expect = 1.980e-29
Identity = 87/237 (36.71%), Postives = 120/237 (50.63%), Query Frame = 0
Query:   46 QLRGGGCAAAVGSTAARRGAGADGLVTRVRGGRTSDAVVLVEALVETALESGLIIGFVGAAEYLAVRYLAGATEKFSEVARLAL--------WTAAVFASGAATAGPKRWLDKS-----------------------QLFNIDVPIGTDWYANLRKPWFNPPNWVFPIMWIPLKILQVFACYEMWDKLE------GRSCLAAPVVVYAVYKSLGDVWNKVFFERRRLRMGTVVISLY 245
            +L GGG     G  AAR GAG+ G+    R    SDA   V A VETALE+ L++ FV A    + R +A  + K    +  AL        W A VF SG  +  P R+ +K                        Q  ++D P+  +WY  LRKP + PP++VFP+ WIPLK +Q+FA   +WDKL       G S L +PV ++ V K++GD WNKV+F R +L +G  V+  Y
Sbjct:  154 RLSGGG-RGGRGPPAARGGAGS-GVAVHGR----SDARSAVLATVETALEASLLVAFVWAWSAASARVVAAVSPKMDAASADALATGLGLMAWGAVVFGSGFLSVLPGRYREKCSAAASLXXXXXXXXXXXXXXXXVQALSVDYPLQKNWYRMLRKPRWTPPDFVFPMAWIPLKTMQMFALSLLWDKLPPGKKLIGNSLLDSPVALFVVNKAIGDTWNKVWFGRHQLGLGVTVVGAY 384          
BLAST of mRNA_S-firma_M_contig887.19751.1 vs. uniprot
Match: B7GCI8_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7GCI8_PHATC)

HSP 1 Score: 122 bits (306), Expect = 2.150e-29
Identity = 82/232 (35.34%), Postives = 126/232 (54.31%), Query Frame = 0
Query:   74 VRGGRT--------SDAVVLVEALVETALESGLIIGFVGAAEYLAVRYLAGATEKFSEVARLALWTA---AVFASGAATAGPKRWLD--KSQLFNIDVPIGT-DWYANLRKPWFNPPNWVFPIMW-IPLKILQVFACYEMWDKLEGRSCLA--APVVVYAVYKSLGDVWNKVFFERRRLRMGTVVISLYFASLLAGIKLFFDVSDRAGYLFAPTAAWVTIATCLQWSTWLLN 288
            VRGG T        +D  + ++A V TALE+  ++G +   + LA R+      K      +  WT+    +F S A  +     +    +Q+F  +V  G  +WY+NL+KPWFNPP WVFP+MW I  K  Q++A   +   L+  S +     + VY  + SLGD WN++FF  +R+R+G+ VI+ ++  L    KLF ++   AGYL  PT AWVT+A+ L ++   LN
Sbjct:   54 VRGGSTKTIKSCADADWKLALKAGVATALETIGLVGVIAGTKTLASRFSVPFLTKMVGGLPIVQWTSLGIVIFGSSAVKSVTDGGVSVASAQVFRPNVTPGDPNWYSNLKKPWFNPPAWVFPVMWLIVAKPTQLWAVSRV---LKRTSTIPYWPTLSVYCAHLSLGDTWNQIFFGCQRIRLGSGVITAFWGMLAFSSKLFANIDPTAGYLLLPTLAWVTVASSLNFAIDRLN 282          
BLAST of mRNA_S-firma_M_contig887.19751.1 vs. uniprot
Match: A0A7S4AEH1_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AEH1_9STRA)

HSP 1 Score: 123 bits (309), Expect = 2.660e-29
Identity = 91/251 (36.25%), Postives = 125/251 (49.80%), Query Frame = 0
Query:   66 GADGLVTRVRGGRTSDA------VVLVEALVETALESGLIIGFVGAAEYLAVRYLA--GATEKFSEVARLALWTA-AVFAS---GAATAGPKRWLDKSQLFNIDVPIGTDWYANLRKPWFNPPNWVFPIMWI----PLKIL---QVFACYEMWDKLEGRSCLAAPVVVYAVYKS---LGDVWNKVFFERRRLRMGTVVISLYFASLLAGIKLFFDVSDRAGYLFAPTAAWVTIATCLQWSTWLLNRNQPHS 294
            G+D  +   RGG  SD+       +   AL E A   G+++G V  A            A E F E   + L +   VF S   GA   G         L    V    +WYANL+KP +NPP W+FPIMW+    P ++    ++F     +D  EG    A P+V  AVY +   LG+ WN VFF    +  GTVVI+ ++A+LLA   LF+ + D AGY   PT  WVT+AT LQ+S + LN+N+  S
Sbjct:   76 GSDSGILVPRGGACSDSNPALFFKIAFNALAEAAALLGILLGSVKYAXXXXXXXXXXXSAIEIFHEPLPILLASMLVVFGSSFVGAIVGGGLSAATNQALNPNKVQGDPNWYANLKKPTWNPPGWLFPIMWLVVSKPTQLCATSRIFKYGLTFD--EGGVVTAVPLVPLAVYTTMLALGNAWNNVFFGLECIGRGTVVITFFYAALLASAYLFYQIDDLAGYYMLPTCGWVTVATALQYSIYFLNKNKDGS 324          
BLAST of mRNA_S-firma_M_contig887.19751.1 vs. uniprot
Match: M1V785_CYAM1 (Similar to carotenoid biosynthesis protein, crtK gene product n=1 Tax=Cyanidioschyzon merolae (strain NIES-3377 / 10D) TaxID=280699 RepID=M1V785_CYAM1)

HSP 1 Score: 119 bits (299), Expect = 4.260e-29
Identity = 58/157 (36.94%), Postives = 84/157 (53.50%), Query Frame = 0
Query:  134 VFASGAATAGPKRWLDKSQLFNIDVPIGTDWYANLRKPWFNPPNWVFPIMWIPLKILQVFACYEMWDKLEGRSCLAAPVV--VYAVYKSLGDVWNKVFFERRRLRMGTVVISLYFASLLAGIKLFFDVSDRAGYLFAPTAAWVTIATCLQWSTWLLN 288
            ++  G   A  K       +  +  P    WY +LRKPWF+PPNWVFP +WIPLK LQ  A Y +W   E  S L       +Y ++ SLG +WN +FF + ++R     +  ++A+L   I +++ V+  A  L APT  W TIA  L + +W LN
Sbjct:   52 MYRRGGQKAEGKSTQGNGTMNEVASPATDPWYRSLRKPWFHPPNWVFPAVWIPLKALQTGALYLVWTS-EDVSLLKRLTATGLYVIHISLGTLWNHLFFGKHKIRKSLYAMGGFYATLAGSIGMYWTVNPTAAALLAPTQVWATIAAALNYQSWALN 207          
BLAST of mRNA_S-firma_M_contig887.19751.1 vs. uniprot
Match: R1FSF7_EMIHU (Uncharacterized protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1FSF7_EMIHU)

HSP 1 Score: 120 bits (300), Expect = 5.970e-29
Identity = 75/209 (35.89%), Postives = 110/209 (52.63%), Query Frame = 0
Query:   82 AVVLVEALVETALESGLIIGFVGAAEYLAVRYLAGATEKFSEVARLALWTAAVFASGAATAGPKRWLDKSQLFNIDVPIGTDWYANLRKPWFNPPNWVFPIMWIPLKILQVFACYEMWDKLEGRSCLAAPVVVYAVYKSLGDVWNKVFFERRRLRMGTVVISLYFASLLAGIKLFFDVSDRAGYLFAPTAAWVTIATCLQWSTWLLNRN 290
            A  L+E     A+E+ L++ F+ AA  +  R  +G   KF  + +LA W   V  S            +  + +    +  +WY  L KP +NPP W+FP+MWIP+K+ Q  A    W  L  R+  AAPVV++ ++ SLGD+WN  FF ++R   G +VI  ++A+L+A   L    S  AG L AP  AWV +A  L    W LNR+
Sbjct:   44 AAKLLEVSKSAAMETILLLAFLRAAAEVVSR-ASGERSKFW-IGQLA-WVVVVQGSSRL---------QGYMQSNTQTLSPEWYDKLVKPNWNPPAWLFPVMWIPIKLAQTAAAGITWRALGHRTFSAAPVVMFLLHLSLGDIWNVQFFLKQRKLTGLLVIYTFWAALIASAVLIGRTSLLAGALVAPGVAWVAVAAALNLDIWYLNRH 240          
BLAST of mRNA_S-firma_M_contig887.19751.1 vs. uniprot
Match: B8BVL6_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BVL6_THAPS)

HSP 1 Score: 120 bits (302), Expect = 1.230e-28
Identity = 77/227 (33.92%), Postives = 107/227 (47.14%), Query Frame = 0
Query:   74 VRGGRTSD------AVVLVEALVETALESGLIIGFVGAAEYLAVRYLAGATEKFSEVARLALWTAAVFAS---GAATAGPKRWLDKSQLFNIDVPIGTDWYANLRKPWFNPPNWVFPIMWIPLKILQVFACYEMWDKLEGRSCLAAPVVVYAVYKSLGDVWNKVFFERRRLRMGTVVISLYFASLLAGIKLFFDVSDRAGYLFAPTAAWVTIATCLQWSTWLLNRNQ 291
            +RGG  SD      A VL  A VET L   L++            +       +S   R+A+  + +F S   G+          K  L   ++P  +DWY+NL KP +NPP W+FPIMW+ +     F              LA P +VY  + SLGD WNKVFF  + +  G  VI  +++ L +   LF +V   AG    PT  WVT+A  L WS +LLNR +
Sbjct:   87 IRGGACSDTTPTLFAKVLASAAVETFLMHQLLM------------FGVKTKSTYSTAIRIAVCFSVIFGSAYFGSLIDNGLSSATKQVLAPNEIPGDSDWYSNLAKPRWNPPGWLFPIMWLIISKPTQFVAVWKLMATSSEKRLALPFLVYCAHLSLGDAWNKVFFGLQCIGRGMAVIFTFWSVLWSSAYLFREVDSSAGLFLLPTCLWVTVAAALNWSIFLLNREK 301          
BLAST of mRNA_S-firma_M_contig887.19751.1 vs. uniprot
Match: A0A7J7IKF3_9RHOD (Uncharacterized protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IKF3_9RHOD)

HSP 1 Score: 118 bits (295), Expect = 1.650e-28
Identity = 53/132 (40.15%), Postives = 79/132 (59.85%), Query Frame = 0
Query:  159 PIGTDWYANLRKPWFNPPNWVFPIMWIPLKILQVFACYEMWDKLEGRSCL--AAPVVVYAVYKSLGDVWNKVFFERRRLRMGTVVISLYFASLLAGIKLFFDVSDRAGYLFAPTAAWVTIATCLQWSTWLLN 288
            P    WY +LRKPW++PPNWVFP +WIPLK+LQ  A Y +W   E  S    AA   +Y V+  LG +WN++FF + ++R     ++ +  +L   I +F+ ++ +A  + APT  W TIA  L + +W LN
Sbjct:   77 PATDSWYRSLRKPWYHPPNWVFPAVWIPLKVLQTGALYLLWTT-EDVSLYKKAAATGLYLVHVGLGTLWNRLFFGKHKIRKSLYAMTGFCTTLAGTIGVFWTINPKAAIMLAPTQVWATIAALLNYQSWALN 207          
BLAST of mRNA_S-firma_M_contig887.19751.1 vs. uniprot
Match: A0A835Z2U8_9STRA (TspO/MBR family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2U8_9STRA)

HSP 1 Score: 119 bits (298), Expect = 2.360e-28
Identity = 71/199 (35.68%), Postives = 103/199 (51.76%), Query Frame = 0
Query:   95 ESGLIIGFVGAAEYLAVRYLAGATEKFSEVARLALWTAAVFASGAATAGPKRWLDKSQL----FNIDVPIGTDWYANLRKPWFNPPNWVFPIMWIPLKILQVFACYEMWDKLEGRSCLAAPVVVYAVYKSLGDVWNKVFFERRRLRMGTVVISLYFASLLAGIKLFFDVSDRAGYLFAPTAAWVTIATCLQWSTWLLNR 289
            E+GL++G +  A  LA R+      K+        W      S       +  L K QL     NID  + T WY  + KP + P +WVFP +WIPLK++QV     +W +  GR  LA P+V+Y ++ +LGD WN  FF  + +  G  +I  +FA+LLA   +F+ +   AG    PT  WVTIAT L +S +  N+
Sbjct:   77 ETGLLLGVLQLARKLAARHPLDI--KYMRAVDYTAWAVIALGSDWLVGVIRLLLVKLQLAKPRVNIDESLRT-WYRLIAKPKWTPADWVFPTVWIPLKLMQVLGARIIWLQ-TGRDPLATPIVLYCLHAALGDNWNTAFFREQYITGGLSIIVQFFAALLATTYIFYQMDPVAGNFLLPTCVWVTIATTLNYSIYRRNK 271          
BLAST of mRNA_S-firma_M_contig887.19751.1 vs. uniprot
Match: A0A7S0IPT2_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0IPT2_9EUKA)

HSP 1 Score: 117 bits (294), Expect = 4.200e-28
Identity = 52/135 (38.52%), Postives = 79/135 (58.52%), Query Frame = 0
Query:  157 DVPIGTDWYANLRKPWFNPPNWVFPIMWIPLKILQVFACYEMWDKLEGRSCLAAPVVVYAVYKSLGDVWNKVFFERRRLRMGTVVISLYFASLLAGIKLFFDVSDRAGYLFAPTAAWVTIATCLQWSTWLLNRNQ 291
            D  +  +WY  + KP +NPP W+FP+MWIPLK+ Q       W  L+ +   +  ++ + ++ +LGDVWN  FF ++R+  G +VI  ++  L+A   L  +VS  AG L APT AWV +A  L    W LNR++
Sbjct:  104 DETLSPEWYGKVVKPSWNPPAWLFPVMWIPLKLAQTVGAGIAWRALDHKVFRSPAIIAFVMHLTLGDVWNSQFFVKQRILTGLLVIYSFWGVLVAATALLTNVSPVAGALVAPTVAWVFVAAALNLDIWYLNRSR 238          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig887.19751.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LDV9_ECTSI2.540e-14275.25Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YIB6_9STRA1.980e-2936.71Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
B7GCI8_PHATC2.150e-2935.34Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A7S4AEH1_9STRA2.660e-2936.25Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]
M1V785_CYAM14.260e-2936.94Similar to carotenoid biosynthesis protein, crtK g... [more]
R1FSF7_EMIHU5.970e-2935.89Uncharacterized protein n=2 Tax=Emiliania huxleyi ... [more]
B8BVL6_THAPS1.230e-2833.92Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
A0A7J7IKF3_9RHOD1.650e-2840.15Uncharacterized protein n=1 Tax=Cyanidiococcus yan... [more]
A0A835Z2U8_9STRA2.360e-2835.68TspO/MBR family-domain-containing protein n=1 Tax=... [more]
A0A7S0IPT2_9EUKA4.200e-2838.52Hypothetical protein n=1 Tax=Calcidiscus leptoporu... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004307TspO/MBR-related proteinPFAMPF03073TspO_MBRcoord: 162..285
e-value: 1.4E-25
score: 89.9
IPR004307TspO/MBR-related proteinPANTHERPTHR10057PERIPHERAL-TYPE BENZODIAZEPINE RECEPTORcoord: 162..291
IPR038330TspO/MBR-related superfamilyGENE3D1.20.1260.100coord: 153..290
e-value: 1.8E-29
score: 104.2
NoneNo IPR availablePANTHERPTHR10057:SF0TRANSLOCATOR PROTEINcoord: 162..291
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 263..287
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 127..144
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 97..115
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..14
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 145..177
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 237..257
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 258..262
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 197..236
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 178..196
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 288..294
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..96
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 116..126
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..21
score: 0.73
NoneNo IPR availableTMHMMTMhelixcoord: 264..286
NoneNo IPR availableTMHMMTMhelixcoord: 235..257

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig887contigS-firma_M_contig887:4520..8643 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig887.19751.1mRNA_S-firma_M_contig887.19751.1Sphaerotrichia firma Sfir_13m malemRNAS-firma_M_contig887 4437..9544 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_M_contig887.19751.1 ID=prot_S-firma_M_contig887.19751.1|Name=mRNA_S-firma_M_contig887.19751.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=295bp
MRIATAVPLLVALLGVSSIEGRTIARSGKSLPTQQHQHLSQLRLSQLRGG
GCAAAVGSTAARRGAGADGLVTRVRGGRTSDAVVLVEALVETALESGLII
GFVGAAEYLAVRYLAGATEKFSEVARLALWTAAVFASGAATAGPKRWLDK
SQLFNIDVPIGTDWYANLRKPWFNPPNWVFPIMWIPLKILQVFACYEMWD
KLEGRSCLAAPVVVYAVYKSLGDVWNKVFFERRRLRMGTVVISLYFASLL
AGIKLFFDVSDRAGYLFAPTAAWVTIATCLQWSTWLLNRNQPHS*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038330TspO/MBR-related_sf
IPR004307TspO_MBR