prot_S-firma_M_contig886.19744.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_M_contig886.19744.1
Unique Nameprot_S-firma_M_contig886.19744.1
Typepolypeptide
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length296
Homology
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BLAST of mRNA_S-firma_M_contig886.19744.1 vs. uniprot
Match: D7G5H7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5H7_ECTSI)

HSP 1 Score: 275 bits (704), Expect = 1.000e-82
Identity = 163/292 (55.82%), Postives = 181/292 (61.99%), Query Frame = 0 
Query:   47 MAETPKELVSCSSVEVVSEGGSIDGSADLCLHPVEHADALLSAQEAKGPRHGIRAFQDASKGGRRHVLMLPVNALVKGLNQVSMNDPLLEGWMGVSPAELARYMLWSGYDTLLLQQVPVMQATSGLGRWKMLECFTEAFARAWEAETSILMDDSG-RSLETSRDGRXXXXXXXXXXXXXXXXSDDAAFHFGTQTLSRG---------------------------------------EGTTTTVNPMMNIFKSLAGGP--GADFDTTTRGHPGFWPPYIRVHTANVLVENGD 296
            MAE PKELVSCSSVEVVSEGG+IDG+ADLCLHPVEHADALLSAQEA+GP+HGIRAFQDASKGGRRHVLMLPVNALVKGLNQVSMNDPLLEGWMGVSPAELAR       +  +  ++P++  TS L   K +    E   +       +     G R    SRD                  S+DAAF FGTQ +SR                                          TTTTVNPMMN+FK+LAG    GAD D+ TRGHPGFWPPYIRVHTANVLVENGD
Sbjct:    1 MAEAPKELVSCSSVEVVSEGGTIDGTADLCLHPVEHADALLSAQEAQGPKHGIRAFQDASKGGRRHVLMLPVNALVKGLNQVSMNDPLLEGWMGVSPAELARLQEELDAEKGIENRLPML--TSSLS--KTIPRSAEKNMKGRAGNGPLTPGSRGSRDSGGSRD-----------------LSEDAAFQFGTQAVSRSPTVQRSPPRAASNRWMHQFLPSRFRDTDVDVSETDLPRRRETTTTVNPMMNVFKALAGVALGGADMDSRTRGHPGFWPPYIRVHTANVLVENGD 271
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig886.19744.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G5H7_ECTSI1.000e-8255.82Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig886contigS-firma_M_contig886:17073..25606 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig886.19744.1mRNA_S-firma_M_contig886.19744.1Sphaerotrichia firma Sfir_13m malemRNAS-firma_M_contig886 16930..25606 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_M_contig886.19744.1 ID=prot_S-firma_M_contig886.19744.1|Name=mRNA_S-firma_M_contig886.19744.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=296bp
MNGAMADRQGGGPSHRNNESNASSIGFAGGGQERTRSLNLAALDAMMAET
PKELVSCSSVEVVSEGGSIDGSADLCLHPVEHADALLSAQEAKGPRHGIR
AFQDASKGGRRHVLMLPVNALVKGLNQVSMNDPLLEGWMGVSPAELARYM
LWSGYDTLLLQQVPVMQATSGLGRWKMLECFTEAFARAWEAETSILMDDS
GRSLETSRDGRDPMTPGSRGSRESRDTSDDAAFHFGTQTLSRGEGTTTTV
NPMMNIFKSLAGGPGADFDTTTRGHPGFWPPYIRVHTANVLVENGD
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