prot_S-firma_M_contig8859.19741.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_M_contig8859.19741.1
Unique Nameprot_S-firma_M_contig8859.19741.1
Typepolypeptide
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length326
Homology
BLAST of mRNA_S-firma_M_contig8859.19741.1 vs. uniprot
Match: A0A6H5JSI8_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSI8_9PHAE)

HSP 1 Score: 75.9 bits (185), Expect = 1.910e-11
Identity = 77/207 (37.20%), Postives = 100/207 (48.31%), Query Frame = 0
Query:   46 SNSTPIIAGVVSAVAVVALIALAGFLKGRRSRQKTADAPAVLSARDNGDDDHLERGLEQNPDFFAPASAPLAVS---GYNASPHRQPPA------------------VPPSAPAPLGGEEQSSKEVFEL---GAGVHTSPPHEDSAQDEEVDGPPSEPAAAAADKSSETATLVPTISTANMSTAEQEEVAQFRQSQRA-ADAAPIAG 227
            S STPI+AG+VSAVA VALI LA  LK RR   +     + +      DDD++E+G E+ PD   P S P  V+   G + SP  Q  A                  VPPSAPA L G+ Q S E  E    G G   +            DG   +  AA       T  +  T STAN+STAE++E++QF Q +R    AAP++G
Sbjct:  204 SGSTPIVAGIVSAVAGVALITLAVLLKRRRGSNQKMTLTSAVPVPPTHDDDNVEQGREEPPDV-RPPSYPAVVAVGDGNDHSPSHQRNASLFGHTPAEVDAVDSGGIVPPSAPAALDGQVQPSAEHAENAAEGCGARLT-----------SDGSAEKFVAA-------TTAITATTSTANLSTAERDELSQFHQRERERVVAAPVSG 391          
BLAST of mRNA_S-firma_M_contig8859.19741.1 vs. uniprot
Match: D7G7X7_ECTSI (ATP binding / amino acid binding / protein kinase/ protein serine/threonine kinase/ protein-tyrosine n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7X7_ECTSI)

HSP 1 Score: 57.8 bits (138), Expect = 1.620e-5
Identity = 72/193 (37.31%), Postives = 99/193 (51.30%), Query Frame = 0
Query:   46 SNSTPIIAGVVSAVAVVALIALAGFLKGRR-SRQKTADAPAVLSARDNGDDDHLERGLEQNPDFFAPASAPLAVSG----YNASPHRQPPAVPPSAPAPLGGE----EQSSKEVFELGAGVHTSPPHEDSAQDEEVDGPPSEPAAA---AADKSSETATLVPTISTANMSTAEQEEVAQFRQSQRAADAAPIA 226
            S+STPI+AGV+SAVA  A IALA   K RR +RQK A   +   A   G   +LE+GL   P     A+  LA  G    + ++ H +  + PP APA   G+     +S+     LGA            +D    G   E +AA   +A+KS+   T   T STAN+ST E+ E+A F+Q Q   +AAP+A
Sbjct:  368 SDSTPIVAGVISAVAGAAFIALAVLGKRRRDTRQKAAQPRSDPPAPGGG---NLEQGLGPVPPPSYTAALALANGGDDDKWPSAQHNEA-SPPPFAPAEGVGDGDIVPRSAPTAVVLGA-----------VEDRIAAGLGGEGSAAVLPSAEKSTTDTTSTATHSTANVSTHERAELAVFQQRQDVLEAAPVA 545          
BLAST of mRNA_S-firma_M_contig8859.19741.1 vs. uniprot
Match: D7G7F2_ECTSI (Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs/ leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7F2_ECTSI)

HSP 1 Score: 55.8 bits (133), Expect = 6.860e-5
Identity = 64/188 (34.04%), Postives = 83/188 (44.15%), Query Frame = 0
Query:   52 IAGVVSAVAVVALIALAGFLKGRRSRQKTADAPAVLSARDNGDDDHLERGLEQNPDFFAPASAPLAVSGYNASPHRQPPAVPPSAPAPLGGEEQSSKEVFELGAGVHTS---PPHEDSAQDEEVDGPPSEPA-------AAAADKSSETATLVPTISTANMSTAEQEEVAQFRQSQRAADAAPIAGAL 229
            +AG+VSAVA  ALIALA FL  RR                  DD ++E G EQ  D F P  + + V+G               AP+         K +     GV      P    SA D EV+      A       A+A       A    T STAN+STAE++E++QF Q +R ADAAP++G L
Sbjct:  488 VAGIVSAVAGAALIALAVFL--RRXXXXXXXXXXXXXXPPTHDDGNVEHGGEQPLDIFRPPYSAVVVAGNGDD----------MAPSHQDNASLRRKALTTEADGVEREGIVPLPAASALDGEVEASAEHAAKDCRARLASAGSAEKLPAATSATTSTANLSTAERDELSQFHQRERVADAAPVSGEL 663          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig8859.19741.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JSI8_9PHAE1.910e-1137.20Protein kinase domain-containing protein n=1 Tax=E... [more]
D7G7X7_ECTSI1.620e-537.31ATP binding / amino acid binding / protein kinase/... [more]
D7G7F2_ECTSI6.860e-534.04Tyrosine kinase specific for activated (GTP-bound)... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 72..325
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 27..49
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..14
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 50..71
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..26
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..26
NoneNo IPR availableTMHMMTMhelixcoord: 49..71

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig8859contigS-firma_M_contig8859:1250..2382 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig8859.19741.1mRNA_S-firma_M_contig8859.19741.1Sphaerotrichia firma Sfir_13m malemRNAS-firma_M_contig8859 151..2382 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_M_contig8859.19741.1 ID=prot_S-firma_M_contig8859.19741.1|Name=mRNA_S-firma_M_contig8859.19741.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=326bp
ADLTAVAPAPSLAGTSPVATPSPSLAATSPVATPSPSFGTAPEQDSNSTP
IIAGVVSAVAVVALIALAGFLKGRRSRQKTADAPAVLSARDNGDDDHLER
GLEQNPDFFAPASAPLAVSGYNASPHRQPPAVPPSAPAPLGGEEQSSKEV
FELGAGVHTSPPHEDSAQDEEVDGPPSEPAAAAADKSSETATLVPTISTA
NMSTAEQEEVAQFRQSQRAADAAPIAGALGRPPLRPLSRARAATSGSARQ
SWRRRRSWRGVVRSPASARRRDFCASWPTSSRTAARTTKQVNRGSGNAAR
SCWHLSGRTRWLTRAGTRWGRQRKS*
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