prot_S-firma_M_contig8857.19739.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_M_contig8857.19739.1
Unique Nameprot_S-firma_M_contig8857.19739.1
Typepolypeptide
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length177
Homology
BLAST of mRNA_S-firma_M_contig8857.19739.1 vs. uniprot
Match: A0A6H5JN07_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN07_9PHAE)

HSP 1 Score: 222 bits (565), Expect = 8.420e-64
Identity = 114/177 (64.41%), Postives = 134/177 (75.71%), Query Frame = 0
Query:    6 EFGLNPKQCLAFYIYAKGMFAKHRDPNADALRLYIGGGAGAGKSHLLKCMKAFIECPALRGQIPDGRMLAIAFQGKQAAAVGGQTAHSVCQAGSKDGDGSLSGSHDGQRALTDKQAAPWKRAVTLAVEEVSMIGCELLISIDKAACEIFPSHKDKPFGNLV------VVFCGDFNQL 176
            EFGLN KQ LAF++++ GM AK   P +D+LRLYIGGGA +GKSH+LK MKAFIECPAL GQI D RMLA+AF+G+QAAAVGG T HSVCQ G K   GSLS +HD Q  + D QA  WK    LAVEEVSM+GCELL++++KAAC +FP HKDKPFGNL       +V CG FNQL
Sbjct: 1399 EFGLNRKQRLAFFVFSNGMLAKKVSPGSDSLRLYIGGGAKSGKSHVLKAMKAFIECPALVGQIEDSRMLAVAFRGQQAAAVGGTTIHSVCQVGRKTFRGSLSRNHDDQSPMKDTQAIHWKGVNMLAVEEVSMVGCELLVALNKAACSMFPMHKDKPFGNLQPFGNLPLVLCGGFNQL 1575          
BLAST of mRNA_S-firma_M_contig8857.19739.1 vs. uniprot
Match: D7G3U9_ECTSI (ATP-dependent DNA helicase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3U9_ECTSI)

HSP 1 Score: 220 bits (560), Expect = 3.970e-63
Identity = 107/174 (61.49%), Postives = 134/174 (77.01%), Query Frame = 0
Query:    3 LAQEFGLNPKQCLAFYIYAKGMFAKHRDPNADALRLYIGGGAGAGKSHLLKCMKAFIECPALRGQIPDGRMLAIAFQGKQAAAVGGQTAHSVCQAGSKDGDGSLSGSHDGQRALTDKQAAPWKRAVTLAVEEVSMIGCELLISIDKAACEIFPSHKDKPFGNLVVVFCGDFNQL 176
            +AQEFGLN +Q LAF+I+A G+ A+ R    +ALR+YIGGGAG GKSH+LK +KAFIECPA+  ++P GR+L +A+QGKQAA+VGG T HSVC  GS+DG G+LSG HD Q +L D +A  WK    LA+EEVSM+GC LL+ + KAAC +FP HK KPFGN VVV  GDF+QL
Sbjct: 1496 IAQEFGLNRRQRLAFFIFANGLLAQSRPNPPEALRIYIGGGAGTGKSHVLKAIKAFIECPAIAAEVPRGRLLTVAYQGKQAASVGGTTVHSVCSTGSRDG-GNLSGDHDDQSSLPDAKAMHWKGVSVLAIEEVSMVGCNLLVQLHKAACSMFPIHKAKPFGNRVVVMLGDFHQL 1668          
BLAST of mRNA_S-firma_M_contig8857.19739.1 vs. uniprot
Match: A0A6H5KIB1_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIB1_9PHAE)

HSP 1 Score: 198 bits (504), Expect = 1.360e-55
Identity = 99/175 (56.57%), Postives = 126/175 (72.00%), Query Frame = 0
Query:    3 LAQEFGLNPKQCLAFYIYAKGMFAKHRDPNADALRLYIGGGAGAGKSHLLKCMKAFIECPALRGQIPDGRMLAIAFQGKQAAAVGGQTAHSVCQAGSKDGDGSLSGSHDGQRALTDKQAAPWKRAVTLAVEEVSMIGCELLISIDKAACEIFPSHKDKPFGNLVVVFCGDFNQLK 177
            +AQEFGLN KQ  AFYI+A G+ A+ R     ALRLYIGGGAG GK+H+L+ ++AF++ P ++  +P  R+L +AFQGKQAAAVGG T HSVC   + D DG LSG+H+GQ  L   +AA WK  V LA+EE+SMI C LL+ +   AC +FP HK +PFGN VVV  GDFNQL+
Sbjct: 1732 IAQEFGLNRKQRQAFYIFANGLLAQCRPDPPPALRLYIGGGAGTGKTHVLRAIRAFVDSPPVKRLLPRARLLCVAFQGKQAAAVGGTTVHSVCP-NTDDSDGCLSGAHEGQSTLPASKAAHWKGDVVLAIEEISMISCNLLVRLHNTACSMFPLHKGQPFGNRVVVMLGDFNQLR 1905          
BLAST of mRNA_S-firma_M_contig8857.19739.1 vs. uniprot
Match: A0A6H5KXW4_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXW4_9PHAE)

HSP 1 Score: 189 bits (480), Expect = 5.950e-53
Identity = 97/176 (55.11%), Postives = 125/176 (71.02%), Query Frame = 0
Query:    3 LAQEFGLNPKQCLAFYIYAKGMFAKHRDPNADALRLYIGGGAGAGKSHLLKCMKAFIECPALRGQIPDGRMLAIAFQGKQAAAVGGQTAHSVCQAGSKDGDGSLSGSHDGQRALTDKQAAPWKRAVTLAVEEVSMIGCELLISIDKAACEIFPSHK-DKPFGNLVVVFCGDFNQLK 177
            +AQEFGLN KQ  AFYI+A G+ ++ R     ALRLYIGGGAG GK+H+L+ ++AF++ P ++  +P  R+L +AFQGKQAAAVGG T HSVC   + D  G LSG+H+GQ  L   +AA W+R V LA+EE SMI C LL+ +   AC +FP HK  +PFGN VVV  GDFNQL+
Sbjct:  283 IAQEFGLNRKQRQAFYIFANGLLSQFRPDPPPALRLYIGGGAGTGKTHVLRAIRAFVDSPPVKRLLPRARLLCVAFQGKQAAAVGGTTVHSVCP-NTGDSYGCLSGAHEGQSTLPASEAAHWQRDVILAIEESSMISCNLLVRLHNTACSMFPLHKGQQPFGNRVVVMLGDFNQLR 457          
BLAST of mRNA_S-firma_M_contig8857.19739.1 vs. uniprot
Match: A0A6H5K882_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K882_9PHAE)

HSP 1 Score: 162 bits (410), Expect = 5.790e-43
Identity = 86/176 (48.86%), Postives = 109/176 (61.93%), Query Frame = 0
Query:    2 RLAQEFGLNPKQCLAFYIYAKGMFAKHRDPNADALRLYIGGGAGAGKSHLLKCMKAFIECPALRGQIPDGRMLAIAFQGKQAAAVGGQTAHSVCQAGSKDGDGSLSGSHDGQRALTDKQAAPWKRAVTLAVEEVSMIGCELLISIDKAACEIFPSHKDKPFGNLVVVFCGDFNQLK 177
            R+AQEFGLN +Q LAFYI+A G+FAK R P++                                  I +G MLA+AFQGKQAA+VGG T HSVC    + G G     HD Q+ LT+ QA  W+    LAV+E SM+GCE+ +++DKAAC++FP HKDKPFGN+V VFCGDFNQL+
Sbjct: 1070 RIAQEFGLNREQRLAFYIFANGIFAKKRSPHSP---------------------------------IEEGGMLAVAFQGKQAASVGGTTIHSVCNVPGRKGSGGKD--HDDQKGLTEDQALSWEGKSVLAVKEASMVGCEMELALDKAACKVFPMHKDKPFGNMVAVFCGDFNQLR 1210          
BLAST of mRNA_S-firma_M_contig8857.19739.1 vs. uniprot
Match: A0A6H5JT57_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT57_9PHAE)

HSP 1 Score: 157 bits (397), Expect = 3.160e-41
Identity = 83/176 (47.16%), Postives = 114/176 (64.77%), Query Frame = 0
Query:    1 QRLAQEFGLNPKQCLAFYIYAKGMFAKHRDPNADALRLYIGGGAGAGKSHLLKCMKAFIECPALRGQIPDGRMLAIAFQGKQAAAVGGQTAHSVCQAGSKDGDGSLSGSHDGQRALTDKQAAPWKRAVTLAVEEVSMIGCELLISIDKAACEIFPSHKDKPFGNLVVVFCGDFNQL 176
            +R+A EFGLN KQ LAF+I+     A+   P  +ALRL++ GGAG+GKS++L+ + A I+CPAL+G +  G +L +AFQGK AA VGG T HSV     K+ DG++  +  GQ  L++ +AA W  A  LA+EEVSM+ C  L S+ KAA  + PS    PF  ++ V  GD NQL
Sbjct:  748 RRIADEFGLNRKQRLAFFIFGAAWIARDGVPTPNALRLHVSGGAGSGKSYVLRAIVALIDCPALKGVVQPGGLLTVAFQGKAAANVGGNTVHSVADVPRKNNDGAMDNTI-GQTGLSEAKAARWTHAAALAIEEVSMVSCLQLGSLHKAAVSVRPSSASLPFAGMIYVTFGDLNQL 922          
BLAST of mRNA_S-firma_M_contig8857.19739.1 vs. uniprot
Match: A0A6H5KPD9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPD9_9PHAE)

HSP 1 Score: 120 bits (302), Expect = 1.310e-31
Identity = 63/134 (47.01%), Postives = 85/134 (63.43%), Query Frame = 0
Query:    1 QRLAQEFGLNPKQCLAFYIYAKGMFAKHRDPNADALRLYIGGGAGAGKSHLLKCMKAFIECPALRGQIPDGRMLAIAFQGKQAAAVGGQTAHSVCQAGSKDGDGSLSGSHDGQRALTDKQAAPWKRAVTLAVEE 134
            +R+A E GLN KQ LAF+++      +   P ADALRL++ GGAG+G S +L+ +KA I+CPAL+G +  GR+L +AFQGKQAA VGG T HS       D  G+L  +  GQ  L+D +   WK    LA+EE
Sbjct:   29 RRIADELGLNRKQRLAFFLFGAAWIRRTASPTADALRLHVSGGAGSGNSCVLRAIKALIDCPALKGVVRPGRLLTLAFQGKQAACVGGNTVHSATDVPRTDKGGTLDNTA-GQSGLSDAKVVFWKNVAVLAIEE 161          
BLAST of mRNA_S-firma_M_contig8857.19739.1 vs. uniprot
Match: A0A6H5L0L4_9PHAE (Helitron_like_N domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0L4_9PHAE)

HSP 1 Score: 120 bits (301), Expect = 2.560e-28
Identity = 58/84 (69.05%), Postives = 69/84 (82.14%), Query Frame = 0
Query:    3 LAQEFGLNPKQCLAFYIYAKGMFAKHRDPNADALRLYIGGGAGAGKSHLLKCMKAFIECPALRGQIPDGRMLAIAFQGKQAAAV 86
            +AQEFGLN KQ LAFYI+A G+ A++R    +ALRLYIGGGAG GKSH+LK MKAFI+CP L GQIP GR+L +AFQGK A+AV
Sbjct: 1496 IAQEFGLNRKQRLAFYIFANGLLAQNRPDPPEALRLYIGGGAGTGKSHVLKAMKAFIDCPTLAGQIPPGRLLTVAFQGKMASAV 1579          
BLAST of mRNA_S-firma_M_contig8857.19739.1 vs. uniprot
Match: A0A8H5BTV0_9AGAR (ATP-dependent DNA helicase n=1 Tax=Tulosesus angulatus TaxID=980116 RepID=A0A8H5BTV0_9AGAR)

HSP 1 Score: 78.2 bits (191), Expect = 1.410e-13
Identity = 64/174 (36.78%), Postives = 85/174 (48.85%), Query Frame = 0
Query:    3 LAQEFGLNPKQCLAFYIYAKGMFAKHRDPNADALRLYIGGGAGAGKSHLLKCMKAFIECPALRGQIPDGRMLAIAFQGKQAAAVGGQTAHSVCQAGSKDGDGSLSGSHDGQRALTDKQAAPWKRAVTLAVEEVSMIGCELLISIDKAACEIFPSHKDKPFGNLVVVFCGDFNQL 176
            + Q+F LN +Q  AF I A    A  R PN   LR+Y+GG  G GKS ++  +K F      RG+    R+   +F G  A  + G T HS      +    S SGS   +R L     A W+    L ++EVSMIGC LL+ I  A  +        PFG + V+F GDF QL
Sbjct: 1241 VVQQFTLNNEQARAFKIIAN--HALERKPNP--LRMYLGGAGGTGKSRVIDALKDFFT---QRGE--RERLRLASFTGVAARNISGTTLHSALNLFQRI---SKSGSEKSKRDLI----ALWEGVDFLFIDEVSMIGCHLLLQISNALVDA--KGNTAPFGGMNVIFAGDFAQL 1396          
BLAST of mRNA_S-firma_M_contig8857.19739.1 vs. uniprot
Match: A0A8H5BD74_9AGAR (ATP-dependent DNA helicase n=1 Tax=Tulosesus angulatus TaxID=980116 RepID=A0A8H5BD74_9AGAR)

HSP 1 Score: 77.8 bits (190), Expect = 1.920e-13
Identity = 60/176 (34.09%), Postives = 84/176 (47.73%), Query Frame = 0
Query:    1 QRLAQEFGLNPKQCLAFYIYAKGMFAKHRDPNADALRLYIGGGAGAGKSHLLKCMKAFIECPALRGQIPDGRMLAIAFQGKQAAAVGGQTAHSVCQAGSKDGDGSLSGSHDGQRALTDKQAAPWKRAVTLAVEEVSMIGCELLISIDKAACEIFPSHKDKPFGNLVVVFCGDFNQL 176
            + + Q+F LN +Q  AF I A     +  D     LR+++GG  G GKS ++  +K F      RG+    R+   +F G  A  + G T HS      +    S +GS   +R L     A W+    L V+EVSMIGC LL+ I  A  +        PFG L ++F GDF QL
Sbjct: 1267 ENIVQQFTLNSEQARAFQIIANHALVRRPD---HPLRMFLGGAGGTGKSRVIDALKEFF---IQRGE--RERLRLASFTGVAARNISGSTLHSALNLVQRK---SKAGSDKSKRDLI----ALWEGVDFLFVDEVSMIGCRLLLEISNALVDA--KGNTAPFGGLNIIFAGDFAQL 1425          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig8857.19739.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JN07_9PHAE8.420e-6464.41ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
D7G3U9_ECTSI3.970e-6361.49ATP-dependent DNA helicase n=2 Tax=Ectocarpus sili... [more]
A0A6H5KIB1_9PHAE1.360e-5556.57ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
A0A6H5KXW4_9PHAE5.950e-5355.11ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
A0A6H5K882_9PHAE5.790e-4348.86ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
A0A6H5JT57_9PHAE3.160e-4147.16ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
A0A6H5KPD9_9PHAE1.310e-3147.01Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L0L4_9PHAE2.560e-2869.05Helitron_like_N domain-containing protein n=1 Tax=... [more]
A0A8H5BTV0_9AGAR1.410e-1336.78ATP-dependent DNA helicase n=1 Tax=Tulosesus angul... [more]
A0A8H5BD74_9AGAR1.920e-1334.09ATP-dependent DNA helicase n=1 Tax=Tulosesus angul... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 23..177
e-value: 1.5E-14
score: 55.7
NoneNo IPR availablePANTHERPTHR23274DNA HELICASE-RELATEDcoord: 38..176
NoneNo IPR availablePANTHERPTHR23274:SF11ATP-DEPENDENT DNA HELICASE PIF1coord: 38..176
IPR010285DNA helicase Pif1-likePFAMPF05970PIF1coord: 37..176
e-value: 1.5E-16
score: 60.6
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 8..175

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig8857contigS-firma_M_contig8857:240..770 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig8857.19739.1mRNA_S-firma_M_contig8857.19739.1Sphaerotrichia firma Sfir_13m malemRNAS-firma_M_contig8857 240..770 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_M_contig8857.19739.1 ID=prot_S-firma_M_contig8857.19739.1|Name=mRNA_S-firma_M_contig8857.19739.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=177bp
QRLAQEFGLNPKQCLAFYIYAKGMFAKHRDPNADALRLYIGGGAGAGKSH
LLKCMKAFIECPALRGQIPDGRMLAIAFQGKQAAAVGGQTAHSVCQAGSK
DGDGSLSGSHDGQRALTDKQAAPWKRAVTLAVEEVSMIGCELLISIDKAA
CEIFPSHKDKPFGNLVVVFCGDFNQLK
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR010285DNA_helicase_pif1-like