prot_S-firma_M_contig8856.19738.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_M_contig8856.19738.1
Unique Nameprot_S-firma_M_contig8856.19738.1
Typepolypeptide
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length126
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig8856.19738.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 1..126
e-value: 1.1E-38
score: 134.8
IPR001611Leucine-rich repeatPFAMPF00560LRR_1coord: 15..33
e-value: 0.97
score: 10.2
coord: 63..82
e-value: 1.2
score: 9.9
NoneNo IPR availablePANTHERPTHR27004FAMILY NOT NAMEDcoord: 42..126
NoneNo IPR availablePANTHERPTHR27004FAMILY NOT NAMEDcoord: 1..78
NoneNo IPR availablePANTHERPTHR27004:SF287coord: 42..126
coord: 1..78
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 3..124

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig8856contigS-firma_M_contig8856:2363..3405 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig8856.19738.1mRNA_S-firma_M_contig8856.19738.1Sphaerotrichia firma Sfir_13m malemRNAS-firma_M_contig8856 2363..3405 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_M_contig8856.19738.1 ID=prot_S-firma_M_contig8856.19738.1|Name=mRNA_S-firma_M_contig8856.19738.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=126bp
LAGRIPPELGKLAALEWLNLSGNQLSGYIPPQLGNIGALEWIDLSNEYAA
GNIPKELGALTELKTLWLSYNKLTGPIPPELGDLGALNNLNLVGNQLSGL
IPSTLGNLAALVFLCLSENHLSGESP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001611Leu-rich_rpt
IPR032675LRR_dom_sf