prot_S-firma_M_contig8855.19737.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_M_contig8855.19737.1
Unique Nameprot_S-firma_M_contig8855.19737.1
Typepolypeptide
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length229
Homology
BLAST of mRNA_S-firma_M_contig8855.19737.1 vs. uniprot
Match: A0A6H5JC35_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC35_9PHAE)

HSP 1 Score: 100 bits (249), Expect = 7.480e-21
Identity = 44/65 (67.69%), Postives = 54/65 (83.08%), Query Frame = 0
Query:   29 NNGRWMKEEHEAFLRGVELYEKDWHLIATVVKTRSVLQIRTHGQKYFKKLANGEVFPLEPYASMY 93
            NNGRW KEEH+AFL+G+ L+ K+W LIA +VKTRS +Q+RTHGQKYFKK+  GE FP EPY SM+
Sbjct:    6 NNGRWTKEEHDAFLQGLVLHGKNWDLIAPIVKTRSAVQVRTHGQKYFKKVDKGERFPEEPYESMF 70          
BLAST of mRNA_S-firma_M_contig8855.19737.1 vs. uniprot
Match: A0A6H5KVV5_9PHAE (HTH myb-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVV5_9PHAE)

HSP 1 Score: 86.3 bits (212), Expect = 5.790e-16
Identity = 39/69 (56.52%), Postives = 50/69 (72.46%), Query Frame = 0
Query:   27 RVNNGRWMKEEHEAFLRGVELYEK-DWHLIATVVKTRSVLQIRTHGQKYFKKLANGEVFPLEPYASMYD 94
            R N GRW  EEH  FLRGVEL+++ D   +A+++ TR++LQ+RTH QKYF K+  GE FP EPY S YD
Sbjct:    4 RRNKGRWTHEEHAVFLRGVELFKRSDLEAVASMLPTRTILQVRTHAQKYFDKVDKGEPFPTEPYPSQYD 72          
BLAST of mRNA_S-firma_M_contig8855.19737.1 vs. uniprot
Match: D7FXQ4_ECTSI (HTH myb-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXQ4_ECTSI)

HSP 1 Score: 85.1 bits (209), Expect = 8.290e-16
Identity = 39/69 (56.52%), Postives = 50/69 (72.46%), Query Frame = 0
Query:   27 RVNNGRWMKEEHEAFLRGVELYEK-DWHLIATVVKTRSVLQIRTHGQKYFKKLANGEVFPLEPYASMYD 94
            R N GRW  EEH  FLRGVEL+++ D   +A+++ TR++LQ+RTH QKYF K+  GE FP EPY S YD
Sbjct:    4 RRNKGRWTHEEHAEFLRGVELFKRSDLEAVASMLPTRTILQVRTHAQKYFDKVDKGEPFPNEPYPSQYD 72          
BLAST of mRNA_S-firma_M_contig8855.19737.1 vs. uniprot
Match: A0A6H5L149_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L149_9PHAE)

HSP 1 Score: 84.3 bits (207), Expect = 3.510e-15
Identity = 40/77 (51.95%), Postives = 54/77 (70.13%), Query Frame = 0
Query:   27 RVNNGRWMKEEHEAFLRGVELYEKD-WHLIATVVKTRSVLQIRTHGQKYFKKLANGEVFPLEPYASMYDTTSAPGSS 102
            R N GRW  EEH+AFLRGV  ++++ W  IAT++ TR+VLQIRTH QKY+ K+  GE FP EPY S ++  +   S+
Sbjct:    4 RRNKGRWTSEEHDAFLRGVRRFKRNNWVGIATLLPTRTVLQIRTHAQKYYAKVDKGEPFPDEPYPSQHEAAAGKSSA 80          
BLAST of mRNA_S-firma_M_contig8855.19737.1 vs. uniprot
Match: A0A7S1C6P3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C6P3_9STRA)

HSP 1 Score: 77.0 bits (188), Expect = 1.620e-14
Identity = 33/68 (48.53%), Postives = 51/68 (75.00%), Query Frame = 0
Query:   23 SSSGRVNNGRWMKEEHEAFLRGVELYEKDWHLIATVVKTRSVLQIRTHGQKYFKKLANGEVFPLEPYA 90
            +  G VN GRW ++EHE F++G+ELY ++W  +A+++ +R+V+QIRTH QKYF+KLA  +   L+P A
Sbjct:   13 TEKGTVNTGRWTRDEHERFVKGLELYGREWKKVASMIPSRTVVQIRTHAQKYFQKLAKEQ--GLDPRA 78          
BLAST of mRNA_S-firma_M_contig8855.19737.1 vs. uniprot
Match: A0A6U4FI15_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4FI15_9STRA)

HSP 1 Score: 81.6 bits (200), Expect = 2.360e-14
Identity = 41/87 (47.13%), Postives = 55/87 (63.22%), Query Frame = 0
Query:   12 LPPGTTNVAVRSSSGR----VNNGRWMKEEHEAFLRGVELYEKDWHLIATVVKTRSVLQIRTHGQKYFKKLANGEVFPLEPYASMYD 94
            +P G  +    SSSG+     N GRW  EEH  FL+G+E++ K W  IA ++KTR+V+QIRTH QKYF+KLA  +    EP A + D
Sbjct:    9 VPRGVGDAKEESSSGKRTGKENTGRWSYEEHRLFLKGLEMHGKGWKKIAELIKTRTVVQIRTHAQKYFQKLAKAKQGGAEPGAVLLD 95          
BLAST of mRNA_S-firma_M_contig8855.19737.1 vs. uniprot
Match: A0A7S3LH14_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LH14_9STRA)

HSP 1 Score: 80.9 bits (198), Expect = 3.150e-14
Identity = 35/63 (55.56%), Postives = 48/63 (76.19%), Query Frame = 0
Query:   16 TTNVAVRSSSGRVNNGRWMKEEHEAFLRGVELYEKDWHLIATVVKTRSVLQIRTHGQKYFKKL 78
            TT+VA + SSG    GRW +EEHE FL G++L+ K W  IAT++ TR+V+Q+RTH QKYF+K+
Sbjct:  109 TTSVAEKHSSGEEKVGRWTEEEHEVFLEGLKLHGKQWKTIATMIGTRTVVQVRTHAQKYFQKM 171          
BLAST of mRNA_S-firma_M_contig8855.19737.1 vs. uniprot
Match: A0A7S3LKU2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3LKU2_9STRA)

HSP 1 Score: 77.4 bits (189), Expect = 3.430e-14
Identity = 30/65 (46.15%), Postives = 47/65 (72.31%), Query Frame = 0
Query:   15 GTTNVAVRSSSGRVNNGRWMKEEHEAFLRGVELYEKDWHLIATVVKTRSVLQIRTHGQKYFKKLA 79
            G T +    +  R N GRW K EH+ F++G+++Y K+W  IA +++TR+++QIRTH QKYF+K+A
Sbjct:   74 GITMIEAAENGNRENTGRWTKAEHDRFVKGLDVYGKEWKKIAAMIETRTIVQIRTHAQKYFQKIA 138          
BLAST of mRNA_S-firma_M_contig8855.19737.1 vs. uniprot
Match: D7FXJ4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXJ4_ECTSI)

HSP 1 Score: 73.9 bits (180), Expect = 6.850e-14
Identity = 36/62 (58.06%), Postives = 45/62 (72.58%), Query Frame = 0
Query:   27 RVNNGRWMKEEHEAFLRGVELYEKD-WHLIATVVKTRSVLQIRTHGQKYFKKLANGEVFPLE 87
            R N GRW  EEH AFLRGV  ++++ W  IAT++ TR+VLQIRTH QKY+ K+  GE FP E
Sbjct:    9 RRNKGRWTSEEHHAFLRGVRRFKRNNWVGIATLLPTRTVLQIRTHAQKYYAKVDKGEPFPDE 70          
BLAST of mRNA_S-firma_M_contig8855.19737.1 vs. uniprot
Match: A0A7S3PLT1_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PLT1_9STRA)

HSP 1 Score: 77.8 bits (190), Expect = 8.230e-14
Identity = 32/62 (51.61%), Postives = 44/62 (70.97%), Query Frame = 0
Query:   18 NVAVRSSSGRVNNGRWMKEEHEAFLRGVELYEKDWHLIATVVKTRSVLQIRTHGQKYFKKLA 79
            ++     +  +N GRW +EEH  FL G+E Y K+W  IA ++KTRSV+QIRTH QKYF+K+A
Sbjct:   14 DIEKNDGTSNINTGRWTREEHNMFLHGLETYGKEWKKIADLIKTRSVVQIRTHAQKYFQKVA 75          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig8855.19737.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JC35_9PHAE7.480e-2167.69Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KVV5_9PHAE5.790e-1656.52HTH myb-type domain-containing protein n=1 Tax=Ect... [more]
D7FXQ4_ECTSI8.290e-1656.52HTH myb-type domain-containing protein n=1 Tax=Ect... [more]
A0A6H5L149_9PHAE3.510e-1551.95Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S1C6P3_9STRA1.620e-1448.53Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A6U4FI15_9STRA2.360e-1447.13Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S3LH14_9STRA3.150e-1455.56Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
A0A7S3LKU2_9STRA3.430e-1446.15Hypothetical protein (Fragment) n=1 Tax=Aplanochyt... [more]
D7FXJ4_ECTSI6.850e-1458.06Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S3PLT1_9STRA8.230e-1451.61Hypothetical protein n=1 Tax=Aplanochytrium stocch... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001005SANT/Myb domainSMARTSM00717santcoord: 29..77
e-value: 1.1E-9
score: 48.2
IPR001005SANT/Myb domainPFAMPF00249Myb_DNA-bindingcoord: 31..74
e-value: 1.4E-9
score: 38.0
NoneNo IPR availableGENE3D1.10.10.60coord: 32..78
e-value: 2.5E-14
score: 55.0
NoneNo IPR availablePANTHERPTHR12802SWI/SNF COMPLEX-RELATEDcoord: 31..189
NoneNo IPR availablePANTHERPTHR12802:SF20MPN DOMAIN-CONTAINING PROTEIN CG4751coord: 31..189
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 25..79
score: 12.755
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 29..79

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig8855contigS-firma_M_contig8855:1222..2162 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig8855.19737.1mRNA_S-firma_M_contig8855.19737.1Sphaerotrichia firma Sfir_13m malemRNAS-firma_M_contig8855 1222..2164 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_M_contig8855.19737.1 ID=prot_S-firma_M_contig8855.19737.1|Name=mRNA_S-firma_M_contig8855.19737.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=229bp
SPQRSPSLPPLLPPGTTNVAVRSSSGRVNNGRWMKEEHEAFLRGVELYEK
DWHLIATVVKTRSVLQIRTHGQKYFKKLANGEVFPLEPYASMYDTTSAPG
SSSASSSVPVVSPPSPFIAREGNQQQQQQQQQQLTMAATAAAPAAARGSV
LSAAGSTSASGPHVEPMPRTSDVDVTSASDDNNHNGPTLMAAAGSYSPVC
PHPPFCTASWARHGSSAASGSVGAPPPGR
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009057Homeobox-like_sf
IPR017930Myb_dom
IPR001005SANT/Myb