prot_S-firma_M_contig8845.19723.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_M_contig8845.19723.1
Unique Nameprot_S-firma_M_contig8845.19723.1
Typepolypeptide
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length332
Homology
BLAST of mRNA_S-firma_M_contig8845.19723.1 vs. uniprot
Match: A0A6H5L225_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L225_9PHAE)

HSP 1 Score: 371 bits (953), Expect = 2.510e-124
Identity = 200/276 (72.46%), Postives = 210/276 (76.09%), Query Frame = 0
Query:   56 WTADGGGAGPNRTMTFGGRGAPGGXXXXXXXXXXXXXXPPAPPGGPGMDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGGAPSGPLPPNYLCRRCSQPGHHIRDCPTIDDPAYKNTRLKRVVGIPTSMIKLADGDRQGGGLVNASGQLVTIRANDQAFRKLKEFGGGQSVQGLLDRLSQSAPAHLKCPICSKIMSDAVILPCCAKSTCDSCVRRALNASAAMSCPLCQTRGVGPDSLLPNESLRAAVDEYLTRVTRESRGKAGEERAATERLQED 331
            WTADG G GPNRTMTFG  G P G         X    P      PGMD                                AP GPLPPNY+CRRC +PGH I+DCPT +D +Y NTRLKRVVGIPTSMIKL+DGDRQGGGLVNASGQLVTIRANDQAFRKLKEFGGGQSVQGLLDRLS+SAP HLKCPICSKIMSDAVILPCCAKSTCDSCVRRALNASA+MSCPLCQ+RGVGPDSLLPNESLRA VDEYLTRVTRESRGKAG ERAA+ERLQED
Sbjct:    4 WTADGAGTGPNRTMTFGRPGGPAGVGPGGRVGRX----PAGVTAPPGMDSMGVGRR-------------------------APQGPLPPNYVCRRCCKPGHFIQDCPTNNDSSYDNTRLKRVVGIPTSMIKLSDGDRQGGGLVNASGQLVTIRANDQAFRKLKEFGGGQSVQGLLDRLSESAPKHLKCPICSKIMSDAVILPCCAKSTCDSCVRRALNASASMSCPLCQSRGVGPDSLLPNESLRAGVDEYLTRVTRESRGKAGNERAASERLQED 250          
BLAST of mRNA_S-firma_M_contig8845.19723.1 vs. uniprot
Match: D8LMD5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMD5_ECTSI)

HSP 1 Score: 332 bits (850), Expect = 5.430e-109
Identity = 181/251 (72.11%), Postives = 189/251 (75.30%), Query Frame = 0
Query:   47 MRHGFANRSWTADGGGAGPNRTMTFGGRGAPGGXXXXXXXXXXXXXXPPAPPGGPGMDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGGAPSGPLPPNYLCRRCSQPGHHIRDCPTIDDPAYKNTRLKRVVGIPTSMIKLADGDRQGGGLVNASGQLVTIRANDQAFRKLKEFGGGQSVQGLLDRLSQSAPAHLKCPICSKIMSDAVILPCCAKSTCDSCVRRALNASAAMSCPLCQTRGVGPDSLLPNE 297
            MRHGFANR WTADG G GPNRTMTFGGRG                     P GG    XXXXXX                          AP GPLPPNY+CRRC +PGH I+DCPT +D +Y NTRLKRVVGIPTSMIKL+DGDRQGGGLVNASGQLVTIRANDQAFRKLKEFGGGQSVQGLLDRLS+SAP HLKCPICSKIMSDAVILPCCAKSTCDSCVRRALNASA+MSCPLCQTRGVGPDSLLPNE
Sbjct:    1 MRHGFANRRWTADGAGTGPNRTMTFGGRGG-------------------GPAGGXXXXXXXXXX--------------------------APQGPLPPNYVCRRCFKPGHFIQDCPTNNDSSYDNTRLKRVVGIPTSMIKLSDGDRQGGGLVNASGQLVTIRANDQAFRKLKEFGGGQSVQGLLDRLSESAPKHLKCPICSKIMSDAVILPCCAKSTCDSCVRRALNASASMSCPLCQTRGVGPDSLLPNE 206          
BLAST of mRNA_S-firma_M_contig8845.19723.1 vs. uniprot
Match: A0A836CNQ4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNQ4_9STRA)

HSP 1 Score: 209 bits (532), Expect = 5.440e-57
Identity = 100/194 (51.55%), Postives = 144/194 (74.23%), Query Frame = 0
Query:  138 PSGPLPPNYLCRRCSQPGHHIRDCPTIDDPAYKNTRLKRVVGIPTSMIKLADGDRQGGGLVNASGQLVTIRANDQAFRKLKEF-GGGQSVQGLLDRLSQSAPAHLKCPICSKIMSDAVILPCCAKSTCDSCVRRALNASAAMSCPLCQTRGVGPDSLLPNESLRAAVDEYLTRVTRESRGKAGEERAATERLQE 330
            P    PP Y+C+RCS+PGH+++DCPT  DP Y NTR KR++G+P++M+++A+ +++GGGLV+A G+ V +++N +AF KLK+  GGG     LLD+LS +AP HLKCP+C  I+ DAV++PCC  S CDSCVR AL A++ M CPLC   GV PD L+PN SLRAA D+++ R+T+++R +A   R A  +LQ+
Sbjct:  239 PGSAPPPAYVCKRCSKPGHYVKDCPTNGDPNYDNTRRKRILGVPSTMLQVAE-EQKGGGLVDAMGRRVVLKSNKEAFAKLKDLKGGGGGGAQLLDQLSAAAPEHLKCPLCRNIVQDAVLVPCCQGSACDSCVRDALAANS-MQCPLCSRPGVTPDQLIPNRSLRAAADDFVARMTKDARARADLAREAALQLQQ 430          
BLAST of mRNA_S-firma_M_contig8845.19723.1 vs. uniprot
Match: K3X144_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X144_GLOUD)

HSP 1 Score: 154 bits (390), Expect = 1.600e-38
Identity = 118/305 (38.69%), Postives = 159/305 (52.13%), Query Frame = 0
Query:   29 TAEDEEAAINALNQQAGSMRHG-FANRSWTADGGGAGPNRTMTF--GGRGAPGGXXXXXXXXXXXXXXPPAPPGGPGMDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGGAPSGPL-----------PPNYLCRRCSQPGHHIRDCPTIDDPAYKNTRLKRVVGIPTSMIKLADGDRQ-----GGGLVNAS-GQLVTIRANDQAFRKLKEFGGGQSVQGLLDRLSQSAPAHLKCPICSKIMSDAVILPCCAKSTCDSCVRRALNASAAMSCPLCQTRGVGPDSLLPNESLRAAVDEYLTRVTRE 313
            T EDE AA+ ++++QA  MR     N++WTA GG +  ++ M +  GGRG                       GGPG  X     XX    XX      XXXXXXXXX  G P G             PPNY+C RC  PGH+I++CPT  DP Y   R+K+  GIP S +K  +   +     G  +VNA  G L  I   ++ F KL    GG +    LD+   + P HL CP+C ++M+DAV++PCC +S CD C+R AL     ++CPLC T  + P+ LLPN+ LR +VDE+L R   E
Sbjct:  142 TMEDELAALQSIHEQAEDMRGARLGNKTWTAQGG-SNADKVMNYYSGGRG-----------------------GGPGXXXRGFMGXXRGPMXXRGEFGGXXXXXXXXXXMGGPPGMHNNNPNQAMGNPPPNYVCYRCGTPGHYIQNCPTNGDPEYDQHRVKKKTGIPKSFMKAVNDPSEIPVGAGKTVVNAPWGGLAVIEPQNKNFSKLMAKSGGSAT---LDQFIANPPDHLACPLCKRLMNDAVLIPCCQESACDECLRSAL-IEKKLTCPLCNTTNMSPEKLLPNKVLRTSVDEFLRRARTE 418          
BLAST of mRNA_S-firma_M_contig8845.19723.1 vs. uniprot
Match: A0A329T760_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329T760_9STRA)

HSP 1 Score: 155 bits (391), Expect = 2.890e-38
Identity = 129/300 (43.00%), Postives = 168/300 (56.00%), Query Frame = 0
Query:   29 TAEDEEAAINALNQQAGSMRHG-FANRSWTADGGGAGPNRTMTFGGRGAPGGXXXXXXXXXXXXXXPPAPPGGPGMDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGGAPSGPL--------PPNYLCRRCSQPGHHIRDCPTIDDPAYKNTRLKRVVGIPTSMIKLADGDRQ-----GGGLVNAS-GQLVTIRANDQAFRKLKEFGGGQSVQGLLDRLSQSAPAHLKCPICSKIMSDAVILPCCAKSTCDSCVRRALNASAAMSCPLCQTRGVGPDSLLPNESLRAAVDEYLTRVTRE 313
            T EDE AA+ ++++QA  MR     N++WTA  G +  N  M +     PGG                    G    XXXXXXXXXXXXXXXXXXXXXXXXXXXX RG  P GP+        PPNY+C RC  PGH+I++CPT  DP +   R+K+  GIP S +K      +     G  +VNA  G L  I   ++ F KL    GG +    LD+   + P HL CP+C ++MSDAV++PCC +S CD C+R AL     ++CPLC    + P+ LLPN+ LR +VDE+L R   E
Sbjct:  146 TMEDEMAALQSIHEQAEDMRGSRLGNKTWTASSG-SNANHVMNYYSANGPGGEA------------------GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRGAGPGGPVGPNLLGNPPPNYVCYRCGTPGHYIQNCPTNGDPEFDQHRVKKKTGIPKSFMKAVSDPSEIPVGAGKTVVNAPWGGLAVIEPQNKNFSKLMARSGGSAT---LDQFISNPPEHLACPLCRRLMSDAVLIPCCQESACDECLRSAL-IERKLTCPLCNVSNMSPEKLLPNKVLRTSVDEFLRRARTE 422          
BLAST of mRNA_S-firma_M_contig8845.19723.1 vs. uniprot
Match: A0A2P4Y5F3_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A2P4Y5F3_9STRA)

HSP 1 Score: 151 bits (382), Expect = 4.580e-38
Identity = 128/300 (42.67%), Postives = 167/300 (55.67%), Query Frame = 0
Query:   29 TAEDEEAAINALNQQAGSMRHG-FANRSWTADGGGAGPNRTMTFGGRGAPGGXXXXXXXXXXXXXXPPAPPGGPGMDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRG---GAPSGPL-----PPNYLCRRCSQPGHHIRDCPTIDDPAYKNTRLKRVVGIPTSMIKLADGDRQ-----GGGLVNAS-GQLVTIRANDQAFRKLKEFGGGQSVQGLLDRLSQSAPAHLKCPICSKIMSDAVILPCCAKSTCDSCVRRALNASAAMSCPLCQTRGVGPDSLLPNESLRAAVDEYLTRVTRE 313
            T EDE AA+ ++++QA  MR     N++WTA  G +  N  M +     PGG                    G    XXXXXXXXXXXXXXXXXXXXXXXXXX   RG   G P+GP      PPNY+C RC  PGH+I++CPT  DP +   R+K+  GIP S +K      +     G  +VNA  G L  I   ++ F KL    GG +    LD+   + P HL CP+C ++MSDAV++PCC +S CD C+R AL     ++CPLC    + P+ LLPN+ LR +VDE+L R   E
Sbjct:  145 TMEDELAALQSIHEQAEDMRGSRLGNKTWTASSG-SNANHVMNYYSANGPGGEA------------------GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGGRGTGPGVPAGPNLLGSPPPNYVCYRCGTPGHYIQNCPTNGDPEFDQHRVKKKTGIPKSFMKAVSDPSEIPVGAGKTVVNAPWGGLAVIEPQNKNFSKLMARSGGSAT---LDQFISNPPEHLACPLCRRLMSDAVLIPCCQESACDECLRSAL-IERKLTCPLCNVSNMSPEKLLPNKVLRTSVDEFLRRARTE 421          
BLAST of mRNA_S-firma_M_contig8845.19723.1 vs. uniprot
Match: D0NE99_PHYIT (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=D0NE99_PHYIT)

HSP 1 Score: 152 bits (385), Expect = 1.280e-37
Identity = 131/300 (43.67%), Postives = 169/300 (56.33%), Query Frame = 0
Query:   29 TAEDEEAAINALNQQAGSMRHG-FANRSWTADGGGAGPNRTMTFGGRGAPGGXXXXXXXXXXXXXXPPAPPGGPGMDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRG---GAPSGPL-----PPNYLCRRCSQPGHHIRDCPTIDDPAYKNTRLKRVVGIPTSMIKLADGDRQ-----GGGLVNAS-GQLVTIRANDQAFRKLKEFGGGQSVQGLLDRLSQSAPAHLKCPICSKIMSDAVILPCCAKSTCDSCVRRALNASAAMSCPLCQTRGVGPDSLLPNESLRAAVDEYLTRVTRE 313
            T EDE AA+ ++++QA  MR     N++WTA  G +  N  M +     PGG                    G    XXXXXXXXXXXXXXXXXXXXXXXXXXXX RG   GAP GP      PPNY+C RC  PGH+I++CPT  DP +   R+K+  GIP S +K      +     G  +VNA  G L  I   ++ F KL    GG +    LD+   + P HL CP+C ++MSDAV++PCC +S CD C+R AL     ++CPLC    + P+ LLPN+ LR +VDE+L R   E
Sbjct:  138 TMEDELAALQSIHEQAEDMRGSRLGNKTWTASSG-SNANHVMNYYAANGPGGEA------------------GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRGAGSGAPGGPNLLGNPPPNYVCYRCGTPGHYIQNCPTNGDPEFDQHRVKKKTGIPKSFMKAVSDPSEIPVGAGKTVVNAPWGGLAVIEPQNKNFSKLMARSGGSAT---LDQFISNPPEHLACPLCRRLMSDAVLIPCCQESACDECLRSAL-IERKLTCPLCNVSNMSPEKLLPNKVLRTSVDEFLRRARTE 414          
BLAST of mRNA_S-firma_M_contig8845.19723.1 vs. uniprot
Match: A0A6A4FP78_9STRA (Uncharacterized protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A4FP78_9STRA)

HSP 1 Score: 151 bits (382), Expect = 4.570e-37
Identity = 130/300 (43.33%), Postives = 168/300 (56.00%), Query Frame = 0
Query:   29 TAEDEEAAINALNQQAGSMRHG-FANRSWTADGGGAGPNRTMTFGGRGAPGGXXXXXXXXXXXXXXPPAPPGGPGMDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRG---GAPSGPL-----PPNYLCRRCSQPGHHIRDCPTIDDPAYKNTRLKRVVGIPTSMIKLADGDRQ-----GGGLVNAS-GQLVTIRANDQAFRKLKEFGGGQSVQGLLDRLSQSAPAHLKCPICSKIMSDAVILPCCAKSTCDSCVRRALNASAAMSCPLCQTRGVGPDSLLPNESLRAAVDEYLTRVTRE 313
            T EDE AA+ ++++QA  MR     N++WTA  G +  N  M +     PGG                    G    XXXXXXXXXXXXXXXXXXXXXXXXXXXX RG   G P GP      PPNY+C RC  PGH+I++CPT  DP +   R+K+  GIP S +K      +     G  +VNA  G L  I   ++ F KL    GG +    LD+   + P HL CP+C ++MSDAV++PCC +S CD C+R AL     ++CPLC    + P+ LLPN+ LR +VDE+L R   E
Sbjct:  146 TMEDEMAALQSIHEQAEDMRGSRLGNKTWTASTG-SNANHVMNYYAASGPGGEA------------------GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRGAGPGXPGGPNLLGNPPPNYVCYRCGTPGHYIQNCPTNGDPEFDQHRVKKKTGIPKSFMKAVSDPSEIPVGAGKTVVNAPWGGLAVIEPQNKNFSKLMALSGGSAT---LDQFISNPPEHLACPLCRRLMSDAVLIPCCQESACDECLRSAL-IERKLTCPLCNVSNMSPEKLLPNKVLRTSVDEFLRRARTE 422          
BLAST of mRNA_S-firma_M_contig8845.19723.1 vs. uniprot
Match: A0A2P4X587_9STRA (Uncharacterized protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4X587_9STRA)

HSP 1 Score: 151 bits (382), Expect = 4.620e-37
Identity = 128/300 (42.67%), Postives = 167/300 (55.67%), Query Frame = 0
Query:   29 TAEDEEAAINALNQQAGSMRHG-FANRSWTADGGGAGPNRTMTFGGRGAPGGXXXXXXXXXXXXXXPPAPPGGPGMDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRG---GAPSGPL-----PPNYLCRRCSQPGHHIRDCPTIDDPAYKNTRLKRVVGIPTSMIKLADGDRQ-----GGGLVNAS-GQLVTIRANDQAFRKLKEFGGGQSVQGLLDRLSQSAPAHLKCPICSKIMSDAVILPCCAKSTCDSCVRRALNASAAMSCPLCQTRGVGPDSLLPNESLRAAVDEYLTRVTRE 313
            T EDE AA+ ++++QA  MR     N++WTA  G +  N  M +     PGG                    G    XXXXXXXXXXXXXXXXXXXXXXXXXX   RG   G P+GP      PPNY+C RC  PGH+I++CPT  DP +   R+K+  GIP S +K      +     G  +VNA  G L  I   ++ F KL    GG +    LD+   + P HL CP+C ++MSDAV++PCC +S CD C+R AL     ++CPLC    + P+ LLPN+ LR +VDE+L R   E
Sbjct:  139 TMEDELAALQSIHEQAEDMRGSRLGNKTWTASSG-SNANHVMNYYSANGPGGEA------------------GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGGRGAGPGVPAGPNLLGSPPPNYVCYRCGTPGHYIQNCPTNGDPEFDQHRVKKKTGIPKSFMKAVSDPSEIPVGAGKTVVNAPWGGLAVIEPQNKNFSKLMARSGGSAT---LDQFISNPPEHLACPLCRRLMSDAVLIPCCQESACDECLRSAL-IERKLTCPLCNVSNMSPEKLLPNKVLRTSVDEFLRRARTE 415          
BLAST of mRNA_S-firma_M_contig8845.19723.1 vs. uniprot
Match: A0A484DZX4_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DZX4_BRELC)

HSP 1 Score: 151 bits (382), Expect = 4.780e-37
Identity = 130/304 (42.76%), Postives = 170/304 (55.92%), Query Frame = 0
Query:   29 TAEDEEAAINALNQQAGSMRHG-FANRSWTADGGGAGPNRTMTF----GGRGAPGGXXXXXXXXXXXXXXPPAPPGGPGMDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGGAPSGPL--------PPNYLCRRCSQPGHHIRDCPTIDDPAYKNTRLKRVVGIPTSMIKLADGDRQ---GGG--LVNAS-GQLVTIRANDQAFRKLKEFGGGQSVQGLLDRLSQSAPAHLKCPICSKIMSDAVILPCCAKSTCDSCVRRALNASAAMSCPLCQTRGVGPDSLLPNESLRAAVDEYLTRVTRE 313
            T EDE AA+ ++++QA  MR     N++WTA  G +  N  M +    G +G  GG                    GPG  XXXXXXXXXXXXXXXXXXXXXXXXX    RG  P GP         PPNY+C RC  PGH+I++CPT  DP +   R+K+  GIP S +K      +   GGG  +VNA  G L  I   ++ F KL    GG +    LD+   + P HL CP+C ++MSDAV++PCC +S CD C+R AL     ++CPLC    + P+ LLPN+ LR +V+E+L R   E
Sbjct:  146 TMEDEMAALESIHEQAEDMRGARLGNKTWTASSG-SNANNVMNYYAANGLQGEAGGR-------------------GPGXXXXXXXXXXXXXXXXXXXXXXXXXXXG---RGAVPGGPSTPNLVGNPPPNYVCYRCGTPGHYIQNCPTNGDPEFDQHRVKKKTGIPKSFMKAVSDPSEIPVGGGKTVVNAPWGGLAVIEPQNKNFSKLMAQSGGSAT---LDQFISNPPEHLACPLCRRLMSDAVLIPCCQESACDECLRSAL-IDRKLTCPLCSVNNMSPEKLLPNKVLRTSVNEFLRRARTE 422          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig8845.19723.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L225_9PHAE2.510e-12472.46Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LMD5_ECTSI5.430e-10972.11Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CNQ4_9STRA5.440e-5751.55Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
K3X144_GLOUD1.600e-3838.69Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A329T760_9STRA2.890e-3843.00Uncharacterized protein n=2 Tax=Phytophthora TaxID... [more]
A0A2P4Y5F3_9STRA4.580e-3842.67Uncharacterized protein n=2 Tax=Phytophthora TaxID... [more]
D0NE99_PHYIT1.280e-3743.67Uncharacterized protein n=2 Tax=Phytophthora TaxID... [more]
A0A6A4FP78_9STRA4.570e-3743.33Uncharacterized protein n=5 Tax=Phytophthora TaxID... [more]
A0A2P4X587_9STRA4.620e-3742.67Uncharacterized protein n=1 Tax=Phytophthora palmi... [more]
A0A484DZX4_BRELC4.780e-3742.76Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 230..317
e-value: 1.0E-18
score: 68.8
IPR025829Zinc knuckle CX2CX3GHX4CPFAMPF13696zf-CCHC_2coord: 143..163
e-value: 5.1E-10
score: 39.0
NoneNo IPR availableGENE3D4.10.60.10coord: 142..189
e-value: 6.8E-13
score: 50.6
NoneNo IPR availablePANTHERPTHR15439:SF0E3 UBIQUITIN-PROTEIN LIGASE RBBP6coord: 29..318
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 231..310
IPR003613U box domainPFAMPF04564U-boxcoord: 238..308
e-value: 1.6E-5
score: 25.0
IPR033489E3 ubiquitin-protein ligase RBBP6 familyPANTHERPTHR15439RETINOBLASTOMA-BINDING PROTEIN 6coord: 29..318
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 148..162
score: 9.521
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 243..284
score: 10.173
IPR036875Zinc finger, CCHC-type superfamilySUPERFAMILY57756Retrovirus zinc finger-like domainscoord: 134..167

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig8845contigS-firma_M_contig8845:292..4359 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig8845.19723.1mRNA_S-firma_M_contig8845.19723.1Sphaerotrichia firma Sfir_13m malemRNAS-firma_M_contig8845 292..4359 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_M_contig8845.19723.1 ID=prot_S-firma_M_contig8845.19723.1|Name=mRNA_S-firma_M_contig8845.19723.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=332bp
SSAPAGDGGPGAAAGGPAGDAGAGGQSNTAEDEEAAINALNQQAGSMRHG
FANRSWTADGGGAGPNRTMTFGGRGAPGGGPGGRGGGRGGSRGPPAPPGG
PGMDGMGAGRGGGRGGPSQRGGGFFGGRGGGMGRGGAPSGPLPPNYLCRR
CSQPGHHIRDCPTIDDPAYKNTRLKRVVGIPTSMIKLADGDRQGGGLVNA
SGQLVTIRANDQAFRKLKEFGGGQSVQGLLDRLSQSAPAHLKCPICSKIM
SDAVILPCCAKSTCDSCVRRALNASAAMSCPLCQTRGVGPDSLLPNESLR
AAVDEYLTRVTRESRGKAGEERAATERLQEDI
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036875Znf_CCHC_sf
IPR001841Znf_RING
IPR001878Znf_CCHC
IPR033489RBBP6
IPR003613Ubox_domain
IPR025829Zn_knuckle_CX2CX3GHX4C
IPR013083Znf_RING/FYVE/PHD