prot_S-firma_M_contig884.19715.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_M_contig884.19715.1
Unique Nameprot_S-firma_M_contig884.19715.1
Typepolypeptide
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length171
Homology
BLAST of mRNA_S-firma_M_contig884.19715.1 vs. uniprot
Match: D7G210_ECTSI (SET domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G210_ECTSI)

HSP 1 Score: 215 bits (548), Expect = 7.380e-62
Identity = 105/146 (71.92%), Postives = 122/146 (83.56%), Query Frame = 0
Query:   26 GLEARVREFNAWLASVDFPVRKVEAGVVGHGMRLGVVATEPIPRGDPYLSVPRSVVLDASKARDDPELGPPLARIRASLCPRGLWLDDEDSLRVLLIREAFVRGEHSPWAPYLGLLPTPSDMRGYHPLFFGDATIDAFEGSDVRAA 171
            GL+A VREFNAW  +VDFP+RKVEAG++G+GMRLG+VATE IP+G  YLSVP S++LDASKAR DPELGPPLAR+ ASL P GLW  D DSLRVLLI E FVR + SPWAPYL LLPT S+M  YHPLFF +ATI +FEGSDV+A+
Sbjct:  478 GLKALVREFNAWTRTVDFPIRKVEAGLIGNGMRLGLVATEAIPQGQTYLSVPGSIILDASKARTDPELGPPLARLEASLGPLGLWDQDTDSLRVLLIAETFVRADLSPWAPYLRLLPTLSEMEAYHPLFFDNATIASFEGSDVQAS 623          
BLAST of mRNA_S-firma_M_contig884.19715.1 vs. uniprot
Match: A0A6H5L5J3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5J3_9PHAE)

HSP 1 Score: 154 bits (390), Expect = 1.480e-40
Identity = 99/225 (44.00%), Postives = 113/225 (50.22%), Query Frame = 0
Query:   26 GLEARVREFNAWLASVDFPVRKVEAGVVGHGMRLGVVATEPIPRGDPYLSVPRSVVLDASK--------------------------------------------------------------ARDDPELGPPLARIRASLCPRGLWLDDEDSLRVLLIREAFVR----------GEH-------------SPWAPYLGLLPTPSDMRGYHPLFFGDATIDAFEG 165
            GL+  VREFNAW  +VDFP+RKVEAG++G+GMRLG+VATE I +G PYLSV  S++LDASK                                                              AR +PELGPPLAR+ ASL P GLW  D DSLRVLLI E FVR            H             SP APYL LLPTPS+M  YHPLFF  ATI +FEG
Sbjct:  523 GLKTLVREFNAWTRTVDFPIRKVEAGLIGNGMRLGLVATEAIRQGQPYLSVSGSIILDASKVKLCPGVLAHAAYQCLARMWEKGRGGGGHILCNPAPGSIRLDHSFFRFTPMIVSVVSSKMFKARTNPELGPPLARLEASLGPLGLWDQDIDSLRVLLIAETFVRLVFATTWGHFPRHAAFSSSAKPISGLSPRAPYLRLLPTPSEMEAYHPLFFDSATIASFEG 747          
BLAST of mRNA_S-firma_M_contig884.19715.1 vs. uniprot
Match: A0A2R5GEH5_9STRA (Histone-lysine N-methyltransferase setd3 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GEH5_9STRA)

HSP 1 Score: 80.9 bits (198), Expect = 1.270e-14
Identity = 50/144 (34.72%), Postives = 72/144 (50.00%), Query Frame = 0
Query:   27 LEARVREFNAWLASVDFPVRKVEAGVVGHGMRLGVVATEPIPRGDPYLSVPRSVVLDASKARDDPELGPPLARIRASLCPRGLWLDDEDSLRVLLIREAFVRGEHSPWAPYLGLLPTPSDMRGYHPLFFGDATIDAFEGSDVRA 170
            LE +V   N+W+    FPV KVEA  V H +R+G + TE +   DPYL +P+ +V+D   A +  ++ P +      LC      D    L + L+ E FV G  S W PYL LLP P +     P FF +  +   EG   ++
Sbjct:  480 LETQVARLNSWVKEQAFPVVKVEAATVPH-LRVGTIVTEDLAAEDPYLIIPKDLVMDVRTATES-KVYPFIFH----LCENLGIPDPFHELMIFLMFEYFVEGPRSVWWPYLSLLPRPDEFMA--PSFFSEEDLAILEGHQTQS 615          
BLAST of mRNA_S-firma_M_contig884.19715.1 vs. uniprot
Match: A0A8J5SJT6_ZIZPA (Uncharacterized protein n=2 Tax=Zizania palustris TaxID=103762 RepID=A0A8J5SJT6_ZIZPA)

HSP 1 Score: 54.7 bits (130), Expect = 1.350e-5
Identity = 44/142 (30.99%), Postives = 72/142 (50.70%), Query Frame = 0
Query:   28 EARVREFNAWLASVDFPVRKVEA-GVVGHGMRLGVVATEPIPRGDPYLSVPRSVVLDASKARDDPELGPPLARIRASLCPRGLWLDDEDSLRVLLIREAFVRGEHSPWAPYLGLLPTPSDMRGYHPLFFGDATIDAFEGSDV 168
            +A ++EF  W++S         +   V  G  LG+VA   + RG+    VP+ + +DA       +LG  L+     L P   W+    ++ +LL+REA  RG HSPWAPYL +LP+ SD      +F+ +  +   +G+ +
Sbjct:  109 DAALQEFRRWISSHGADTGGAASPAAVPEG--LGLVAARGLSRGEVVAEVPKKLWIDADAVAAS-DLGRALSG--GDLRP---WV----AVSLLLLREA-ARGAHSPWAPYLAILPSQSDST----IFWSEEELLEIQGTQL 233          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig884.19715.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7G210_ECTSI7.380e-6271.92SET domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5L5J3_9PHAE1.480e-4044.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A2R5GEH5_9STRA1.270e-1434.72Histone-lysine N-methyltransferase setd3 n=1 Tax=H... [more]
A0A8J5SJT6_ZIZPA1.350e-530.99Uncharacterized protein n=2 Tax=Zizania palustris ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.90.1410.10coord: 27..171
e-value: 5.0E-20
score: 73.8
NoneNo IPR availablePANTHERPTHR13271UNCHARACTERIZED PUTATIVE METHYLTRANSFERASEcoord: 25..166
NoneNo IPR availablePANTHERPTHR13271:SF34N-LYSINE METHYLTRANSFERASE SETD6coord: 25..166
NoneNo IPR availableSUPERFAMILY82199SET domaincoord: 30..169

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig884contigS-firma_M_contig884:11632..13999 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig884.19715.1mRNA_S-firma_M_contig884.19715.1Sphaerotrichia firma Sfir_13m malemRNAS-firma_M_contig884 11630..13999 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_M_contig884.19715.1 ID=prot_S-firma_M_contig884.19715.1|Name=mRNA_S-firma_M_contig884.19715.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=171bp
PAGGDTGQEGESDGGGSGGGDGDGAGLEARVREFNAWLASVDFPVRKVEA
GVVGHGMRLGVVATEPIPRGDPYLSVPRSVVLDASKARDDPELGPPLARI
RASLCPRGLWLDDEDSLRVLLIREAFVRGEHSPWAPYLGLLPTPSDMRGY
HPLFFGDATIDAFEGSDVRAA
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