prot_S-firma_M_contig879.19652.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_M_contig879.19652.1
Unique Nameprot_S-firma_M_contig879.19652.1
Typepolypeptide
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length378
Homology
BLAST of mRNA_S-firma_M_contig879.19652.1 vs. uniprot
Match: D7FJT5_ECTSI (Splicing factor PWI domain-containing protein / RNA recognition motif (RRM)-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJT5_ECTSI)

HSP 1 Score: 233 bits (593), Expect = 6.260e-66
Identity = 209/256 (81.64%), Postives = 213/256 (83.20%), Query Frame = 0
Query:  128 MDAKRAARAKLEEEETRKRRLAVLSALENAGXXXXXXXXXXXXXXXXXXXXAPGAGAGXNGAAPSAASERQRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXE------AAPAEASTEAPESKVAAVVEKKGKARDKELVGSIPKDREELFAYEINWQVVETHNIIQSKMRPWIVKKIIEYLGEEEKTLTEFILTKLGQRALPQTILDELKLVLEEDAAVFMTKMWRMLVFCTLRAQERAQ 377
            M+AKRAARAKL EEETRKRRLAVLSALENAG    XXXXXXXXXXXXXXXX       X             XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX           +A  E  ESKVAAVVEKKGKARDKELVGSIPKDREELFAYEINWQ+VE HNIIQSKMRPWIVKKIIEYLGEEEKTLTEF+LTKLGQRA PQTILDELKLVLEEDAAVFMTKMWRMLVFCTLRA ERAQ
Sbjct:  546 MEAKRAARAKLAEEETRKRRLAVLSALENAGNDGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAGGEGDAGKEGSESKVAAVVEKKGKARDKELVGSIPKDREELFAYEINWQMVEQHNIIQSKMRPWIVKKIIEYLGEEEKTLTEFVLTKLGQRAKPQTILDELKLVLEEDAAVFMTKMWRMLVFCTLRAMERAQ 801          
BLAST of mRNA_S-firma_M_contig879.19652.1 vs. uniprot
Match: A0A7S2CNP4_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CNP4_9STRA)

HSP 1 Score: 133 bits (335), Expect = 1.820e-34
Identity = 62/106 (58.49%), Postives = 80/106 (75.47%), Query Frame = 0
Query:  269 KARDKELVGSIPKDREELFAYEINWQVVETHNIIQSKMRPWIVKKIIEYLGEEEKTLTEFILTKLGQRALPQTILDELKLVLEEDAAVFMTKMWRMLVFCTLRAQE 374
            K RDK +V  IPKD+  LF++ I+W V++ H I+ + MRPWIVKKI+EYLGEEEKTL +FI+TKL Q + P  ILDELKLVL++DA  F+ KMWRML F  ++  E
Sbjct:   36 KERDKRIVDRIPKDKATLFSFPIHWDVLDAHRIVATNMRPWIVKKIVEYLGEEEKTLIDFIITKLDQHSNPHAILDELKLVLDDDAETFVLKMWRMLAFHGIKLAE 141          
BLAST of mRNA_S-firma_M_contig879.19652.1 vs. uniprot
Match: A0A835Z4I4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4I4_9STRA)

HSP 1 Score: 142 bits (357), Expect = 2.660e-33
Identity = 69/109 (63.30%), Postives = 82/109 (75.23%), Query Frame = 0
Query:  269 KARDKELVGSIPKDREELFAYEINWQVVETHNIIQSKMRPWIVKKIIEYLGEEEKTLTEFILTKLGQRALPQTILDELKLVLEEDAAVFMTKMWRMLVFCTLRAQERAQ 377
            K RDK LV  IPKD++ LFAY ++W VV +H I+ +KMRPW+V+KI EYLGEEE TL +F+  KL  RA PQ +LDEL+LVLEEDA VF  KMWRMLVFC LRA    Q
Sbjct:  656 KDRDKVLVDMIPKDKDALFAYPLDWGVVTSHGIVANKMRPWVVRKIREYLGEEEPTLIDFVCAKLEARAPPQAVLDELRLVLEEDAEVFTVKMWRMLVFCALRAAAAPQ 764          
BLAST of mRNA_S-firma_M_contig879.19652.1 vs. uniprot
Match: A0A7S2XWQ2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XWQ2_9STRA)

HSP 1 Score: 130 bits (327), Expect = 4.580e-32
Identity = 59/106 (55.66%), Postives = 83/106 (78.30%), Query Frame = 0
Query:  271 RDKELVGSIPKDREELFAYEINWQVVETHNIIQSKMRPWIVKKIIEYLGEEEKTLTEFILTKLGQRALPQTILDELKLVLEEDAAVFMTKMWRMLVFCTLRAQERA 376
            + K+LV  IPK++  LFAY++NW +V  H+++ SK+RPW+ KKI EYLGEEE+TL +FI+++L +RA PQ+ILDEL LVL+EDA +F  K+WRML+F  LR  + A
Sbjct:  138 QQKDLVDRIPKEKRALFAYKVNWDLVHKHDVVGSKLRPWVSKKITEYLGEEERTLIDFIVSQLMERAHPQSILDELALVLDEDAEIFTVKLWRMLIFHELRIAQGA 243          
BLAST of mRNA_S-firma_M_contig879.19652.1 vs. uniprot
Match: A0A7S3UVP2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UVP2_HETAK)

HSP 1 Score: 123 bits (308), Expect = 7.410e-30
Identity = 57/101 (56.44%), Postives = 80/101 (79.21%), Query Frame = 0
Query:  271 RDKELVGSIPKDREELFAYEINWQVVETHNIIQSKMRPWIVKKIIEYLGEEEKTLTEFILTKLGQRALPQTILDELKLVLEEDAAVFMTKMWRMLVFCTLR 371
            + K LV  IPK++  LFAY + W VV+ H+II+SK++ WIVKKI+E+LGEEE+TL +FI +KL   A P++IL+ELKLVL++DA +FM K+WRML+F  L+
Sbjct:   90 KQKALVDRIPKEKAALFAYPVAWAVVDEHDIIKSKLKAWIVKKIVEFLGEEEETLIDFICSKLISHADPESILEELKLVLDDDAEIFMVKLWRMLIFHVLK 190          
BLAST of mRNA_S-firma_M_contig879.19652.1 vs. uniprot
Match: K3WIU2_GLOUD (PWI domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WIU2_GLOUD)

HSP 1 Score: 119 bits (298), Expect = 6.630e-26
Identity = 56/102 (54.90%), Postives = 74/102 (72.55%), Query Frame = 0
Query:  273 KELVGSIPKDREELFAYEINWQVVETHNIIQSKMRPWIVKKIIEYLGEEEKTLTEFILTKLGQRALPQTILDELKLVLEEDAAVFMTKMWRMLVFCTLRAQE 374
            K L+  IP +  ELF+Y I+W  V+ H I+ +KM PW+ KKIIEYLGEEE TL EFIL KL QRA P+ IL EL+LVL++DA VF+  +WR L F  +R+++
Sbjct:  452 KSLIEQIPTETTELFSYPIDWMAVDKHKIVAAKMAPWVAKKIIEYLGEEEPTLIEFILKKLDQRAKPEEILTELQLVLDDDAEVFVKLLWRKLAFEAIRSEQ 553          
BLAST of mRNA_S-firma_M_contig879.19652.1 vs. uniprot
Match: L8H642_ACACA (PWI domain containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8H642_ACACA)

HSP 1 Score: 118 bits (296), Expect = 1.970e-25
Identity = 51/111 (45.95%), Postives = 80/111 (72.07%), Query Frame = 0
Query:  264 VEKKGKARDKELVGSIPKDREELFAYEINWQVVETHNIIQSKMRPWIVKKIIEYLGEEEKTLTEFILTKLGQRALPQTILDELKLVLEEDAAVFMTKMWRMLVFCTLRAQE 374
            ++K+ +   K++V  IP  + +LF ++++W +V+   I+Q +M+PW+ KKI+EYLGEEE TL EF+L K+     PQ ILD+L  VLE++A VF+ K+WRML+F  +RAQ+
Sbjct:  573 IKKEREEEAKQIVAMIPASKADLFNFQLSWDIVDEAEIVQKRMKPWVTKKIVEYLGEEEATLIEFVLAKMSNHMAPQEILDQLAFVLEDEAEVFVIKLWRMLIFEMIRAQK 683          
BLAST of mRNA_S-firma_M_contig879.19652.1 vs. uniprot
Match: A0A8K1C3C9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C3C9_PYTOL)

HSP 1 Score: 114 bits (286), Expect = 2.970e-24
Identity = 52/100 (52.00%), Postives = 72/100 (72.00%), Query Frame = 0
Query:  273 KELVGSIPKDREELFAYEINWQVVETHNIIQSKMRPWIVKKIIEYLGEEEKTLTEFILTKLGQRALPQTILDELKLVLEEDAAVFMTKMWRMLVFCTLRA 372
            K L+  IP D++ LFAY INW  V+ H I++ KM PW+ KK++EYLGEE+KT+ +F+L +L   ALPQ IL EL+ VL+++A VF+  +WR L F  LRA
Sbjct:  482 KSLIDQIPTDKDGLFAYHINWSAVDKHKIVEDKMIPWVRKKVLEYLGEEDKTMIDFLLKQLRAHALPQAILKELQAVLDDEAEVFVKLLWRKLAFEALRA 581          
BLAST of mRNA_S-firma_M_contig879.19652.1 vs. uniprot
Match: A0A6B2L9W9_9EUKA (PWI domain-containing protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2L9W9_9EUKA)

HSP 1 Score: 110 bits (276), Expect = 4.610e-24
Identity = 54/107 (50.47%), Postives = 74/107 (69.16%), Query Frame = 0
Query:  266 KKGKARD-----KELVGSIPKDREELFAYEINWQVVETHNIIQSKMRPWIVKKIIEYLGEEEKTLTEFILTKLGQRALPQTILDELKLVLEEDAAVFMTKMWRMLVF 367
            KK K  D     K L+  IP ++E LFAY I+W +VE   I++ KMRPW+ KKI+E L EEE TL E+I  KL   + PQ ILD+L++VL+++A+ F+ KMWRML+F
Sbjct:  207 KKAKQNDARILAKTLIDQIPVEKEALFAYVIDWAIVEEKQIVEQKMRPWVTKKIVELLDEEEPTLIEYICKKLCDHSSPQDILDQLQVVLDDEASAFVIKMWRMLIF 313          
BLAST of mRNA_S-firma_M_contig879.19652.1 vs. uniprot
Match: A0A7S3ZNA8_9STRA (Hypothetical protein n=3 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZNA8_9STRA)

HSP 1 Score: 113 bits (283), Expect = 5.390e-24
Identity = 57/130 (43.85%), Postives = 86/130 (66.15%), Query Frame = 0
Query:  246 AAPAEASTEAPESKVAAVVEKKGKARDKELVGSIPKDREELFAYEINWQVVETHNIIQSKMRPWIVKKIIEYLGEEEKTLTEFILTKLGQRALPQTILDELKLVLEEDAAVFMTKMWRMLVFCTLRAQER 375
            AAPA + ++  +S   A  ++  K RD+ +  +IP D ++LF   ++W  VE   ++Q+K+RPW+ KKI EYLGEEE TL  +I + LG+RA P+ I DEL LVL+EDA   + K+WR+L+F   +A +R
Sbjct:  388 AAPAPSLSDN-QSSARAATDEDAKKRDRAIAEAIPTDADQLFKATVDWAAVERAGVVQAKLRPWVAKKIAEYLGEEEPTLINYICSCLGRRAKPEEIRDELALVLDEDAQTMVVKLWRVLLFHAAKAAQR 516          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig879.19652.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FJT5_ECTSI6.260e-6681.64Splicing factor PWI domain-containing protein / RN... [more]
A0A7S2CNP4_9STRA1.820e-3458.49Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A835Z4I4_9STRA2.660e-3363.30Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2XWQ2_9STRA4.580e-3255.66Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S3UVP2_HETAK7.410e-3056.44Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
K3WIU2_GLOUD6.630e-2654.90PWI domain-containing protein n=1 Tax=Globisporang... [more]
L8H642_ACACA1.970e-2545.95PWI domain containing protein n=1 Tax=Acanthamoeba... [more]
A0A8K1C3C9_PYTOL2.970e-2452.00Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A6B2L9W9_9EUKA4.610e-2450.47PWI domain-containing protein n=1 Tax=Arcella inte... [more]
A0A7S3ZNA8_9STRA5.390e-2443.85Hypothetical protein n=3 Tax=Pelagomonas calceolat... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 124..151
NoneNo IPR availableGENE3D1.20.1390.10coord: 261..375
e-value: 2.2E-37
score: 129.4
NoneNo IPR availablePANTHERPTHR18806RBM25 PROTEINcoord: 127..370
IPR002483PWI domainSMARTSM00311pwi_2coord: 298..371
e-value: 2.9E-20
score: 83.3
IPR002483PWI domainPFAMPF01480PWIcoord: 305..367
e-value: 1.4E-13
score: 50.9
IPR002483PWI domainPROSITEPS51025PWIcoord: 284..377
score: 31.451
IPR036483PWI domain superfamilySUPERFAMILY101233PWI domaincoord: 295..366

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig879contigS-firma_M_contig879:171..2589 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig879.19652.1mRNA_S-firma_M_contig879.19652.1Sphaerotrichia firma Sfir_13m malemRNAS-firma_M_contig879 150..3030 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_M_contig879.19652.1 ID=prot_S-firma_M_contig879.19652.1|Name=mRNA_S-firma_M_contig879.19652.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=378bp
MVAMAAMKSRDDKDTASESKGDRDGNGSSDKRSSRDQDSRDRRRSRSRSR
SRSRSRERKRGRRDRSPDRDRNRSPDRYRGDRDRDRRDRDDRDSDRGGGG
GGGGSRGERSDKDKNGGGDGGSEKDKEMDAKRAARAKLEEEETRKRRLAV
LSALENAGNDGDDSDDGAGGAGGSAGAAAPGAGAGGNGAAPSAASERQRK
EELRRRKAVLAALGDDMLDSDDEEEEEEEEEEAKPAVVVAAAGGEAAPAE
ASTEAPESKVAAVVEKKGKARDKELVGSIPKDREELFAYEINWQVVETHN
IIQSKMRPWIVKKIIEYLGEEEKTLTEFILTKLGQRALPQTILDELKLVL
EEDAAVFMTKMWRMLVFCTLRAQERAQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036483PWI_dom_sf
IPR002483PWI_dom