prot_S-firma_M_contig8776.19640.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_M_contig8776.19640.1
Unique Nameprot_S-firma_M_contig8776.19640.1
Typepolypeptide
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length169
Homology
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BLAST of mRNA_S-firma_M_contig8776.19640.1 vs. uniprot
Match: A0A6H5JNY6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNY6_9PHAE)

HSP 1 Score: 144 bits (362), Expect = 3.480e-37
Identity = 93/180 (51.67%), Postives = 110/180 (61.11%), Query Frame = 0 
Query:    1 MGEPKEPGGVGPAAVLGPVPSVKEILDEVAAEAGLLPGSLDDTFTPDEDEAARDVAKAMSVVHPLLERYRHRHEELTSLLSKAQASASTATAEARELCRGHLQTFGHLEESCTTLARELERASSAAA---------DPNSPGQXXXXXXXXXXXXXXXXXXXXX--EADALAARHHSLVQ 169
            M  P+EPG    AA +  VPSVKEILD VA EAGLL  +  D  TPDE+EAARDVAK MSVV PLLE Y+HRHEEL  LL+ +QASA++ATA+AREL R HL+TFG LEE C  L ++L+ A++ AA           N P Q                       EAD LAAR+ SLVQ
Sbjct:    1 MSSPREPGDAVAAADV--VPSVKEILDMVAVEAGLLGSAFYDETTPDEEEAARDVAKVMSVVRPLLESYQHRHEELAGLLTASQASAASATADARELSRDHLKTFGRLEEGCAGLRQKLDVAAATAAAAEAANSLSGTNIPEQRGSGVSSLSRAEVATQRRLAAVSEADTLAARYRSLVQ 178
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BLAST of mRNA_S-firma_M_contig8776.19640.1 vs. uniprot
Match: D8LBJ7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBJ7_ECTSI)

HSP 1 Score: 109 bits (272), Expect = 1.480e-24
Identity = 69/136 (50.74%), Postives = 81/136 (59.56%), Query Frame = 0 
Query:   46 PDEDEAARDVAKAMSVVHPLLERYRHRHEELTSLLSKAQASASTATAEARELCRGHLQTFGHLEESCTTLARELERASSAAA----------DPNSPGQXXXXXXXXXXXXXXXXXXXXX--EADALAARHHSLVQ 169
            PDEDEAARDVAK MSVV PLL+ Y+HRHEEL  LL+ +QASA++ATA AREL + HLQTFG LEE C  L +EL+ A++ AA            N P Q                       EAD LAAR+ SLVQ
Sbjct:    2 PDEDEAARDVAKVMSVVGPLLKSYQHRHEELAGLLTASQASAASATAGARELSQDHLQTFGRLEEGCAGLRQELDVAAATAAAAAEAANSLSGTNIPEQRGSGGSSLSRAEVATQRRLAAVSEADTLAARYRSLVQ 137
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig8776.19640.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JNY6_9PHAE3.480e-3751.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LBJ7_ECTSI1.480e-2450.74Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 66..86

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig8776contigS-firma_M_contig8776:2670..4294 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig8776.19640.1mRNA_S-firma_M_contig8776.19640.1Sphaerotrichia firma Sfir_13m malemRNAS-firma_M_contig8776 2387..4294 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_M_contig8776.19640.1 ID=prot_S-firma_M_contig8776.19640.1|Name=mRNA_S-firma_M_contig8776.19640.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=169bp
MGEPKEPGGVGPAAVLGPVPSVKEILDEVAAEAGLLPGSLDDTFTPDEDE
AARDVAKAMSVVHPLLERYRHRHEELTSLLSKAQASASTATAEARELCRG
HLQTFGHLEESCTTLARELERASSAAADPNSPGQQGGGGGGKEAAARQRR
VAAAAEADALAARHHSLVQ
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