mRNA_S-firma_M_contig9908.20894.1 (mRNA) Sphaerotrichia firma Sfir_13m male
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Overview
Homology
BLAST of mRNA_S-firma_M_contig9908.20894.1 vs. uniprot
Match: A0A6H5KE50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE50_9PHAE) HSP 1 Score: 494 bits (1273), Expect = 1.580e-153 Identity = 323/713 (45.30%), Postives = 432/713 (60.59%), Query Frame = 1
Query: 1 EESAALHERCTYLTACVIVKCRRASSET-NVAPLDACLKEVAKSIEQCGKRGRISRVLNASRDGAEIVRLNASLDRLSGDLGLAGIATVENKVDT---ILSHLQPSP--KLAAVPNGVPMGQSWHTSREGAMDRVCEILGREGGPGLAALAGRSGSGKTTAAAAMVGERG-PIRPRVGETEDQARARMDR---VRAMFPDGVVWLRVGKGEGAADRLPHLMRKLAQLLARTTQRFTRNFEE---DPVGTMKREVSERGLRCLVVADDVWEASVVEKLKETGTWLLLTTRDVSIVEPHETVMLDELTEAEAEGALRGAARLPAHERLNDDAVEILK-ICRCVAMDVAFVGSWSSVRTGNDGVPKSRQAWADVKKHIETQITAVRGEAGLAGEMGDLEVNRLAVLRAGFKYLGAEH-PLAQELYSALAVFPDGHAFSLKDAAVLMKDD---ESYADQTQITMDAVATLERWGVLRTSKRNAYYTILEYRMHDAHVEFAREKLMDRGDICKQAVRRWTSHVSQLKNIRGVDLYALLGIWKALERVGGSGWWASRPYDAQLACIVPRNKSMFYATVLVAQLYEHSDKQAELVPLMRKVIEVCDNSWYGTRTV-MVALWYVGRSLLSEDCVAEHTEVTRRLAELTDSNLKRMSESDDSDGCRAQSMTALNAYGYCAWAAGRREDAESFFRKARSLHTSRQTKGSDDYSQIVFARYGLG 2082
EE L ERC +T VI K + +++ T +V+PL C+ ++ + ++ +G ++R+ RDG +I RL A ++ + +GLAG+ + ++++ IL+ LQP P KLA VP G+P G++WH R+ D V +IL + P +AAL G+SG+GK+TAAA MV R IR ETEDQAR RMDR VRA F DGVV+LRVGKGEGAADRLP LMRKLA+ L + T E +K+ ++ RCLVVADDVWE VV KLKETG W+LLTTR IVEP+E V +D+LT AEAE LRGAA LP +RL D A+++L IC VAMD+AFVGSWS VR +D AWA+ I I VR +A M D +V RL +LRAGF YLG E LAQ+LY A+AVFPDG+AF + DAAVL+ D + ++ A+ LERW VL + +YRMHD H++FAR+K+ D+GD+ K VRRWTS +S+L G D+YAL IW+A+E VGG GW+ RPYD +L + + S +A +VA+LYE K AE+ L R+V+E D+ V MVALWY+GRSL + + E E +R+L EL D+++K + D +AQ + AYG CA AAG + ES+ RKA LH +++ G Q V LG
Sbjct: 140 EELGELCERCDLITVQVIDKAKASNTSTIDVSPLQGCVDKLDEVAKRYHDQGCLARLAQFRRDGDDIQRLRARIEAIVPIMGLAGVVNIMDRLEDVRQILARLQPRPRPKLAPVPPGLPAGEAWHAVRDHVEDEVYKILSGDE-PAVAALTGKSGAGKSTAAADMVRNRKVDIRGLDDETEDQARTRMDRLERVRARFSDGVVYLRVGKGEGAADRLPDLMRKLAKALHEDVLKKTAGAPEAGEKGESYVKKMMTRTKKRCLVVADDVWEPPVVAKLKETGMWVLLTTRFPEIVEPNEGVDVDQLTPAEAEDVLRGAAELPRGQRLCDPAMQVLDDICGFVAMDIAFVGSWSMVRHTDDS-----GAWAEAVSKINDTIVDVREDAD---GMNDSQVKRLGILRAGFDYLGEEEGTLAQKLYVAIAVFPDGYAFGVSDAAVLLNDTHPPDPAPHHMKVASRAIEILERWAVLTMNASG------KYRMHDTHMDFARDKIRDQGDVRKPVVRRWTSRISRLDFAVGRDVYALSDIWRAVEWVGGDGWFDLRPYDKELVSM-GSDCSKSHALDVVAELYEQEQKLAEMETLTREVLEHADDDAGADSCVRMVALWYLGRSLSIQGRLQEQGEASRQLGELFDASVKPSAL--DGGAAQAQLSSIYKAYGVCATAAGEWTEGESWLRKA--LH-AQENGGLGTSLQTVSTLLELG 831
BLAST of mRNA_S-firma_M_contig9908.20894.1 vs. uniprot
Match: A0A6H5JSI2_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSI2_9PHAE) HSP 1 Score: 508 bits (1309), Expect = 1.680e-153 Identity = 289/585 (49.40%), Postives = 375/585 (64.10%), Query Frame = 1
Query: 1 EESAALHERCTYLTACVIVKCRRASSET-NVAPLDACLKEVAKSIEQCGKRGRISRVLNASRDGAEIVRLNASLDRLSGDLGLAGIATVENKVDTILSHLQPSPKLAAVPNGVPMGQSWHTSREGAMDRVCEILGREGGPGLAALAGRSGSGKTTAAAAMVGERGPIRPRVGETEDQARARMDRVRAMFPDGVVWLRVGKGEGAADRLPHLMRKLAQLLARTTQRFTRNFE--EDPVGTMKREVSERGLRCLVVADDVWEASVVEKLKETGTWLLLTTRDVSIVEPHETVMLDELTEAEAEGALRGAARLPAHERLNDDAVEILKICRCVAMDVAFVGSWSSVRTGNDGVPKSRQAWADVKKHIETQITAVRGE--AGLAGEMGDLEVNRLAVLRAGFKYLGAEHPLAQELYSALAVFPDGHAFSLKDAAVLMKDDESYADQTQITMDAVATLERWGVLRTSKRNAYYTILEYRMHDAHVEFAREKLMDRGDICKQAVRRWTSHVSQLKNIRGVDLYALLGIWKALERVGGSGWWASRPYDAQLACIVPRNKSMFYATV----LVAQLYEHSDKQAELVPLMRKV 1728
EE LHERC +T VI K + + + T +V PL C+ ++ + E+ RGR++R+ RDG +I RL ++ + +GL+G+ K+D IL+ LQP PKLA VP P +S+H R+G +DRVC+ILG +GGP +AAL G SG+GKTT+AAAMVGERG DRVRA+FPDGVVWL VG+ G ADRLP LM LA+ L + + +D V +++ VS+ LRCLVVADDVWEASVV+KL+ETG W+LLTTR + EP E V++D L AEAE LRGAA LP ERL D ++++L+IC VAMD AFVGSW+SVRT N GVPKS +AW + + QI VRG+ G GE D +NRLAVLRAGFKY+G E PLAQELY LAVFP+G F DAAVL++++E + ++ LERWGVLRT +YR HDAH +FAR+KLMDR D+ + AV RWT H+S+L GV+++ LL +W+ALE VGG GWWA RPYD QL +V N + YAT +V LY + K EL +M++V
Sbjct: 62 EELEELHERCEMITIQVIDKAKASKTSTIDVKPLQECVDKLKEVAERYHDRGRLARLAQFRRDGEDIQRLRKRIEDVVPIMGLSGVVNNGEKLDQILARLQPGPKLAPVPKKAPFTKSFHVVRDGVVDRVCKILGGDGGPAMAALTGGSGAGKTTSAAAMVGERG-----------------DRVRALFPDGVVWLWVGREAGTADRLPSLMSNLAKRLHEDVMKGAVDAPTGDDGVSYVRKIVSQEKLRCLVVADDVWEASVVQKLRETGMWVLLTTRFPEMGEPEERVVMDTLIPAEAEDVLRGAAELPLGERLCDASMKVLEICGRVAMDTAFVGSWTSVRTTN-GVPKSNKAWERTVEELTAQIDHVRGQMKVGNTGEDNDRAINRLAVLRAGFKYIGREDPLAQELYVKLAVFPEGFLFGESDAAVLLENEE-------VAKGPISILERWGVLRTDASE------KYRTHDAHADFARKKLMDRNDLREPAVERWTEHISRLDFAVGVEIFVLLPMWRALEEVGGKGWWALRPYDDQLIQMVTSNPATSYATSGAVGVVMNLYRGARKLGELAEIMKRV 615
BLAST of mRNA_S-firma_M_contig9908.20894.1 vs. uniprot
Match: D7FZW8_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZW8_ECTSI) HSP 1 Score: 413 bits (1061), Expect = 1.530e-123 Identity = 286/741 (38.60%), Postives = 396/741 (53.44%), Query Frame = 1
Query: 1 EESAALHERCTYLTACVIVKCRRASSETNVAPLDACLKEVAKSIEQCGKRGRISRVLNASRDGAEIVRLNASLDRLSGDLGLAGIATVENKVDT-------ILSHLQPSP----KLAAVPNGVPMGQSWHTSREGAMDRVCEILGREGGPGLAALAGRSGSGKTTAAAAMVGERGPIRPRVGETEDQARARMDRVRAMFPDGVVWLRVGKGEGAADRLPHLMRKLAQL----LARTTQRFTRNFEEDPVGTMKREVSE----RGLRCLVVADDVWEASVVEKLKETGTWLLLTTRDVSIVEPH--ETVMLDELTEAEAEGALRGAARLPAHERLNDDAVEILKICRCVAMDVAFVGSWSSVRTGNDGVPKSRQAWADVKKHIETQITAVRGEAGLAGEMGDLEVNRLAVLRAGFKYL--GAEHPLAQELYSALAVFPDGHAFSLKDAAVLMKDDESYADQTQITMDAVATLERWGVLRTSKRNAYYTILEYRMHDAHVEFAREKLMDRGDICKQAVRRWTSHVSQLKNIRGVDLYALLGIWKALERVGGSGWWASRPYDAQLACIVPRNKSMFYATVLVAQLYEHSDKQAELVPLMRKVIEV------CDNSWYGTRTVMVALWYVGRSLLSEDCVAEHTEVT------RRLAELTDSNLKRMSESDDSDGCRAQSMTALNAYGYCAWAAGRREDAESFFRKARSLHTSRQTKGSDDYSQIVFARYGLGLCLKEKGRWGEA 2118
EE AAL +RCTY+TAC +VKCR SE +VAPL C++ E+C +RG++SRV+ A D +EI LN+S+DRL+ DLGLAGIA +E KVD I L+ P KLAAVP G P+ +SWH R AM V + L + ALAG SGSGKTT AA +V R VR F DG+VWL V EGA RLP LM +LA++ + + R + ED +K+ + E R L+CLVVAD+VWE VV KL ETG W+LL+TRD ++V+ + V++DEL++A+AE L+ AA LP RL DDAV+++K+C VAMDVAFVG WS+VR +D P S W+D I T++ V + R A+L+ GF+ L G++ Q LY +LAV PDGHAFSLKDAAVL+ D + V LERW ++R+++ YRMHDAH +FARE L+DRG + + A++RWT ++S L +R D Y L G+W A+ER+GG GW +RPY+ L ++ + + V E + R+++EV D+ + +A+W + E EV R+ L S L+ ++ DD+D + + TAL + G R AE+ R RSL G + + Q+ LG+ +E GR EA
Sbjct: 62 EELAALEQRCTYITACFVVKCRLIESEVDVAPLKDCVEAAKNFAERCSRRGKVSRVIKAFSDKSEIAGLNSSVDRLTTDLGLAGIAVLEGKVDDMKKTLDRIDQRLESLPRSFGKLAAVPMGAPVRKSWHVERRHAMATVLDALNGSDRACVVALAGYSGSGKTTVAAEIV-------------------RSTEVREAFSDGIVWLPVN--EGAKKRLPSLMLQLARMVHEEIGGSVGRVP-SASEDSATYIKQRLEEGHKGRRLKCLVVADNVWEEDVVSKLVETGMWVLLSTRDEAVVKRSRGKAVVVDELSQADAESVLKRAAELPRESRLPDDAVDLIKLCGRVAMDVAFVGRWSTVRGRHD--PAS---WSDAASTIRTEMEKVGHDPDNDSAENIPAKRRKAILQGGFEDLAIGSDDERVQRLYLSLAVMPDGHAFSLKDAAVLLYDRSPSTEDEASAGGVVDVLERWSIIRSAQGT-------YRMHDAHTDFARECLLDRGHVRRPALKRWTRYLSSLDILRSTDRYVLKGLWLAIERLGGDGWGKTRPYEKALGMMLESDALLRTTAEAVGWFQEAQEDLEGASASWRRLLEVEKRELGADHPFVLNTYGNLAIWAERLGNIEEAAKWHEKEVEGLPLALARMNALVRSGLE--ADLDDADSLSSVAATALE------FRPGDRALAETLLR--RSLDVKEAILGPE-HLQVADTLRQLGVSAREAGRLDEA 757
BLAST of mRNA_S-firma_M_contig9908.20894.1 vs. uniprot
Match: D7FZY7_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZY7_ECTSI) HSP 1 Score: 400 bits (1028), Expect = 1.060e-118 Identity = 246/617 (39.87%), Postives = 347/617 (56.24%), Query Frame = 1
Query: 1 EESAALHERCTYLTACVIVKCRRAS-SETNVAPLDACLKEVAKSIEQCGKRGRISRVLNASRDGAEIVRLNASLDRLSGDLGLAGIATVENKV-------------------------DTILSHLQPSP-KLAAVPNGVPMGQSWHTSREGAMDRVCEILGREGGPGLAALAGRSGSGKTTAAAAMVGERGPIRPRVGETEDQARARMDRVRAMFPDGVVWLRVGKGEGAADRLPHLMRKLAQLLARTTQRFTRNFEEDPVGTMKREVSE----RGLRCLVVADDVWEASVVEKLKETGTWLLLTTRDVSIV--EPHETVMLDELTEAEAEGALRGAARLPAHERLNDDAVEILKICRCVAMDVAFVGSWSSVRTGNDGVPKSRQAWADVKKHIETQITAVRGEAGLAGEMGDLEVNRLAVLRAGFKYL--GAEHPLAQELYSALAVFPDGHAFSLKDAAVLMKDDESYADQTQITMDAVATLERWGVLRTSKRNAYYTILE---YRMHDAHVEFAREKLMDRGDICKQAVRRWTSHVSQLKNIRGVDLYALLGIWKALERVGGSGWWASRPYDAQLACIVPRNKSMFYATVLVAQLYEHSDKQAELVPLMRKVIEV 1737
EE L+ RC YLTACV+VK R++S SE ++ P++ CL+ + +E+CG RG+++RVLNAS D EI R+ A++ L DL LAG+A +E K ++I+ L +P KLA +P P+ +SWH R M+RV E L GGP L L G SGSGKTTAA+ +V R + VR F DGVVWL V GA DRLP LM +LA ++ +D +K ++ +GL+CLVVAD+VWE VV KL ETG W+LL+TRD +V E V +DE++E EAE LR A+ LP RL DDAV+++++C VAMD+AFVG WS+VR +D R AW+D + ++ + GE + + R AVL+AGF+ L G++ Q LY +LAV PDG F++KDAAVL+ D + A+ V LERW VLR S R Y Y +HDAH +FAREKLMDRGD+ + A+ RWT ++S L +R V + + +W +E+VGG GW ++RPY+A LA + + + + V VA+ H + E + R+++++
Sbjct: 69 EELQTLYRRCVYLTACVVVKSRQSSCSEMDLTPVEECLEAAGELVERCGGRGKMTRVLNASSDKEEIARMKANIRDLEADLSLAGVAILEGKTSDLTAMVERMGTNQAATQEMILANTESIIDRLSKTPAKLAKIPKATPIRKSWHVERLYVMERVFEALTAVGGPHLVGLVGDSGSGKTTAASEIV-------------------RSNEVRQAFSDGVVWLTVN--HGAKDRLPSLMLQLAHMMCEEVGGRRPATSDDGAAYIKEKMQRGHGGKGLKCLVVADNVWEKEVVWKLLETGMWVLLSTRDEELVVGSEGEVVGVDEMSEVEAESVLRKASELPPETRLPDDAVDLIELCGRVAMDLAFVGRWSTVRGRSD-----RTAWSDAAGKVRAEMGKIEGERVSGTVVETRDARRKAVLQAGFEDLASGSDDERVQRLYLSLAVLPDGRGFTVKDAAVLLYDRKPSAEDEASAAGVVEILERWSVLR-SIRGCYRMAWRGGHYVLHDAHSDFAREKLMDRGDVRRPALVRWTRNISSLDTLRSVRWHDVRDLWLGVEQVGGDGWKSTRPYEAALAGMEDSDPLLPTSVVAVAKFQRHEEDWEEAIATCRRLLDM 658
BLAST of mRNA_S-firma_M_contig9908.20894.1 vs. uniprot
Match: A0A6H5KRK8_9PHAE (NB-ARC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KRK8_9PHAE) HSP 1 Score: 390 bits (1003), Expect = 6.920e-115 Identity = 274/762 (35.96%), Postives = 389/762 (51.05%), Query Frame = 1
Query: 1 EESAALHERCTYLTACVIVKCRRASSETNVAPLDACLKEVAKSIEQCGKRGRISRVLNASRDGAEIVRLNASLDRLSGDLGLAGIATVEN---------------------------------KVDTILSHL-QPSPKLAAVPNGVPMGQSWHTSREGAMDRVCEILGREGGPGLAALAGRSGSGKTTAAAAMVGERGPIRPRVGETEDQARARMDRVRAMFPDGVVWLRVGKGEGAADRLPHLMRKLAQLLARTTQRFTR---NFEEDPVGTMKREVSE----RGLRCLVVADDVWEASVVEKLKETGTWLLLTTRDVSIVEPH--ETVMLDELTEAEAEGALRGAARLPAHERLNDDAVEILKICRCVAMDVAFVGSWSSVRTGNDGVPKSRQAWADVKKHIETQITAVRGEAGLAGEMG---DLEVNRL-AVLRAGFKYL--GAEHPLAQELYSALAVFPDGHAFSLKDAAVLMKDDESYADQTQITMDAVATLERWGVLRTSKRNAYYTILEYRMHDAHVEFAREKLMDRGDICKQAVRRWTSHVSQLKNIRGVDLYALLGIWKALERVGGSGWWASRPYDAQLACIVPRNKSMFYATV-LVAQLYEHSDKQAELVPLMRKVIEVCDNSWYGTRTVMVALWY-VGRSLLSEDCVAEHTEVTRRLAELTDSNLKRMSES---------DDSDGCRAQSMTALNAYGYCAWAAGRREDAESFFRKARSLHTSRQTKGSDDYSQIVFARYGLGLCLKEKGR 2106
E+ LH+RCTY+TAC IVKCR +E +VAPL+ C+ V K +E+ KRG+ISRVL A D +IV+L L L GDL LAGIA++ K +TIL L +P K+A VP G P +SWH R + V + L +GGP L L G SG+GKTTAA+A+V VR F DG+VWL V EG D LP LM +LAQ++ + +D + +K++V +GL+CLVVAD+VWE+ VV +L ETG W+LL+TRD +V+ E V +DEL+EAEAE LR AA L RL DDA +++++C VAMD+AFVG WS+VR D R AW+D + ++ + G+ E D VNR A+L+AGF+ L G++ Q LY +LAV PDGHAF++KDAAVL+ D E + V LERW ++R+ + YRMHDAH FARE LMDRGD+ + A++R +S L+ +R ++ Y L +W ++RVGG GW +RPY+ L + N +F T+ VA E + R+++ V + ++ ++ + R +D V E E R+ + + R DD+ + + T + + G R +AE R RSL DD Q+ ++ LG+C++E GR
Sbjct: 62 EDLTVLHQRCTYITACFIVKCRHGYTELDVAPLEDCVNAVEKFVERYRKRGKISRVLKAVGDKGDIVQLKERLRDLEGDLSLAGIASLAKYLIADPKPCSPVAFAFQERMGKKQEGNHEELLAKTETILRQLPKPPAKVANVPKGTPTHKSWHVERRNVTETVFQALDADGGPHLVGLVGDSGAGKTTAASAIVSS-------------------IVVRETFSDGIVWLPVN--EGVHDNLPCLMLQLAQMVFEDIGGSVGRRPSGSDDGLAYVKQQVENGHGGKGLKCLVVADNVWESDVVSQLLETGMWILLSTRDEELVKRANGEVVGVDELSEAEAESVLRRAAELSPEARLPDDAKDLIELCGRVAMDLAFVGRWSTVRGRQD-----RTAWSDAACKVRAEMD----KGGVTAESNGSEDSRVNRRRAILQAGFEDLAIGSDDERVQRLYLSLAVLPDGHAFTVKDAAVLLYDREPGTEDEASVGGVVEALERWTIIRSVEAT-------YRMHDAHSNFARESLMDRGDVRRPAIKRLVRSISSLEALRSINRYTLKHLWAGVQRVGGDGWATTRPYEKALEALDESNSPLFRETIEAVAWFQEAQEDWTGANRTWRRLLAVEEVQLGADHPYVLNTYHCLARCAEHQDNVEEAKEWHRKQHQALPLAMARAQSKHVGSEAAGLDDAGSLASLAATVITLH------PGERGEAEMLLR--RSLEIKMAELDQDDV-QVAVVQHDLGVCIREAGR 777
BLAST of mRNA_S-firma_M_contig9908.20894.1 vs. uniprot
Match: D8LFN6_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFN6_ECTSI) HSP 1 Score: 387 bits (993), Expect = 9.070e-115 Identity = 261/650 (40.15%), Postives = 356/650 (54.77%), Query Frame = 1
Query: 1 EESAALHERCTYLTACVIVKCRR-ASSETNVAPLDACLKEVAKSIEQCGKRGRISRVLNASRDGAEIVRLNASLDRLSGDLGLAGIATVENKVDTILSHLQP---------SPKLAAVPNGVPMGQSWHTSREGAMDRVCEILGREGGPGLAALAGRSGSGKTTAAAAMVGERGPIRPRVGETEDQARARMDRVRAMFPDGVVWLRVGKGEGAADRLPHLMRKLAQLLARTTQRFTRNFEE--DPVGTMKREVSE--RGL-------RCLVVADDVWEASVVEKLKETGTWLLLTTRDVSIVEPHE--TVMLDELTEAEAEGALRGAARLPAHERLNDDAVEILKICRCVAMDVAFVGSWSSVRTGNDGVPKSRQAWADVKKHIETQITAVRGEAGLAGEMGDLE-VNRLAVLRAGFKYLGAEHPLAQELYSALAVFPDGHAFSLKDAAVLMKDD--ESYADQ--TQITMDAVATLERWGVLRTSKRNAYYTILEYRMHDAHVEFAREKLMDRGDICKQAVRRWTSHVSQLKNIRGVDLYALLGIWKALERVGGSGWWASRPYDAQLACIVPRNKSMFYATVLVAQLYEHSDKQAELVPLMRKVIEVCDN--SWYGTRTVMVALWYVGRSLLSEDCVAEHTEVTRRLAEL 1860
E AL ERCTY+TACVIVK R+ +SSE NVAPL++C+ I +C +RG R AS D E++ LN+ +D L+GDLGLAGIA+++ KVD + + L S +AAVPNG P+ SWH +R+ +D V E L P + L GRSGSGKTT AA++VGE R ET DQ R++RVR F DGVVWLRVG+G G+A+R+P LM +LA+ + + + F P G +S+ RG RCLVVADDVWE ++E+L+ TG W+L T+RD +VE E V +D+L++AEAE LRGAA L L A ++++ C +A + FVG WS+V+ +D + WA+ I+ +++A+ GEA DL V R+A+LRAGF L A++ LY +LAV PDG AF K+AAV + DD E A Q T+ VA LE+W V+ T N + RMHDAH +FAR KL D+ A+RRW S+L IR +D + ++ +W A E +GG W SRPY L + D E +P ++ V+E N +W T V + L V +D EH EV L L
Sbjct: 105 ERLKALEERCTYVTACVIVKWRQTSSSEMNVAPLESCVNAAEDFIARCSRRGLCGRCTKASSDNDELLTLNSRVDSLTGDLGLAGIASLDAKVDDLKAMLAEVIAQNTMPASVPVAAVPNGKPVEHSWHVARDRVVDAVYEHLSCGQTPQVVGLVGRSGSGKTTCAASIVGE-STGRRHQNETGDQMLRRLNRVREHFRDGVVWLRVGRGGGSAERVPALMSQLAKTVFEDLK-HSYGFAPGASPTGGGSAFISDFVRGKGSAAGRKRCLVVADDVWEVDILEELRHTGMWVLFTSRDPDLVERVEGSVVPVDQLSKAEAECLLRGAAELSTGSSLPSAAAQVIERCDRMANRLEFVGRWSTVKGSDD-----EEDWAEAVSAIDAEMSAMAGEANAQKSDEDLSGVKRVAILRAGFLDLAAQNGFNPLLYLSLAVMPDGRAFGAKEAAVFLFDDWAEERASQRRTRQAAKVVANLEQWAVV-TMHGNLF------RMHDAHSDFARNKLKRSEDVRASALRRWRGFTSRLDTIRSMDYFEMVDLWHATEMIGGESWRVSRPYHVALDSL--------------------RDSSPECIPSLKAVVEFGINECAWEVTHDVALRLLRV-----QKDAAVEHAEVRHTLESL 715
BLAST of mRNA_S-firma_M_contig9908.20894.1 vs. uniprot
Match: A0A6H5KLK9_9PHAE (NB-ARC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KLK9_9PHAE) HSP 1 Score: 368 bits (945), Expect = 2.660e-108 Identity = 275/749 (36.72%), Postives = 378/749 (50.47%), Query Frame = 1
Query: 10 AALHERCTYLTACVIVKCRRASSETNVAPLDACLKEVAKSIEQCGKRGRISRVLNASRDGAEIVRLNASLDRLSGDLGLAGIATVENKVDTI------------LSHLQP-------------SPK-LAAVPNGVPMGQSWHTSREGAMDRVCEILGREGGPGLAALAGRSGSGKTTAAAAMVGERGPIRPRVGETEDQARARMDRVRAMFPDGVVWLRVGKGEGAADRLPHLMRKLAQL----LARTTQRFTRNFEEDPVGTMKREVSE---RGLRCLVVADDVWEASVVEKLKETGTWLLLTTRDVSIVEPHE---TVMLDELTEAEAEGALRGAARLPAHERLNDDAVEILKICRCVAMDVAFVGSWSSVRTGNDGVPKSRQAWADVKKHIETQITAVRGEAGLAGEMGDLE-VNRLAVLRAGFKYL--GAEHPLAQELYSALAVFPDGHAFSLKDAAVLMKDDESYADQTQITMDAVATLERWGVLRTSKRNAYYTILEYRMHDAHVEFAREKLMDRGDICKQAVRRWTSHVSQLKNIRGVD-LYALLGIWKALERVGGSGWWASRPYDAQLACIVPRNKSMFYATVLVAQLYEHSDKQAELVPLMRKVIEVCDNSWYG----TRTVMVALWYVGRSLLSEDCVAEHTEVTRRLAELTDSNLKRMSESDDSDGCRAQSMTALNAYGYCAW--AAGRREDAESFFRKARSLHTSRQTKGSDDYSQIVFARYGLGLCLKEKGRWGEA 2118
AAL++RCTY+T CVIV+CR+ SS PL C+ V +E+C +RG +SRVL A+ D EI L L+ L GDL LAGIATV KV+ + LSH Q SP+ LA VP G P +SWH R M VC+ L EGGP L L G SGSGKTTAAA +V R VR F DG+VWL V +GA +RL LM LA++ + + R ++ T +R S +GL+CLVVAD+VWE +V+ KL ETG W+LL+TRD ++V E V +DEL+E +A LR A+ L RL D+AVE++++C VAMDVAFVG WS+VR +D R AW+D + ++I R ++ + D+ V R AVL+AGF+ L G++ LY +LAV PDGHAF+ KDA L+ D + T + + TLERW LRT YRMHDAH FAR+ +MDRG + K AV+RWT +S L +R D + L G+W A+ R+GG W RPY A L+ + N + + + + R+++ V T + AL Y L + + + E RR+ L ++ ++ + DG ALN+ A R +AE+ R SL G DD + + + LG+ + GR EA
Sbjct: 51 AALYQRCTYITGCVIVRCRKGSSGLKATPLMECVNAVGAFVERCSRRGMLSRVLKATDDKEEIAGLKQRLEDLEGDLRLAGIATVGGKVEDLKALLEHVDTKQALSHSQTLANHDIMFARVGISPETLATVPAGTPARKSWHVERRHVMRAVCDALPGEGGPRLVGLVGDSGSGKTTAAAEIV-------------------RSTEVREAFSDGIVWLSVN--DGATERLRALMMHLARVVFEDIGGSVGRRPAGLDDGAAYTRQRMQSGHGGKGLKCLVVADNVWEEAVISKLLETGMWVLLSTRDEALVRSAEGGVVVGVDELSEEDAMSVLRRASELSPELRLPDEAVELVELCGRVAMDVAFVGRWSTVRGRSD-----RTAWSDAAHKVRSKIERSR----VSDNVWDIRAVRRKAVLQAGFEDLAIGSDDERIPRLYLSLAVLPDGHAFTAKDATALLYDRAPCPEDEVSTEELIRTLERWSALRTEGG-------AYRMHDAHSGFARDCVMDRGYVRKPAVKRWTLRLSSLDVLRSFDDPFVLKGLWLAVGRLGGESWRNVRPYAAALSEMDESNPLLLKSLQSLGWFQDAQGDWQSASDTCRRILAVKRRQLGADHPHTILTLRALVYCAERLGNAEEMTEWQAELRRVLPLAVVRMQLRLDAGEVDG--VDDANALNSIASTMLNLAPDDRGNAEALMR--HSLEIQEVKLGRDDV-YVAYNLHHLGVSVHLAGRLDEA 757
BLAST of mRNA_S-firma_M_contig9908.20894.1 vs. uniprot
Match: D7G330_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G330_ECTSI) HSP 1 Score: 343 bits (879), Expect = 4.610e-104 Identity = 196/376 (52.13%), Postives = 251/376 (66.76%), Query Frame = 1
Query: 16 LHERCTYLTACVIVKCRRASS-ETNVAPLDACLKEVAKSIEQCGKRGRISRVLNASRDGAEIVRLNASLDRLSGDLGLAGIATVEN----KVDTILSHLQPSPKLAAVPNGVPMGQSWHTSREGAMDRVCEILGREGGPGLAALAGRSGSGKTTAAAAMVGER-GPIRPRVGETEDQARARMDRVRAMFPDGVVWLRVGKGEGAADRLPHLMRKLAQLLARTTQRFTRN---FEEDPVGTMKREVSERGLRCLVVADDVWEASVVEKLKETGTWLLLTTRDVSIVEPHETVMLDELTEAEAEGALRGAARLPAHERLNDDAVEILKICRCVAMDVAFVGSWSSVRTGNDGVPKSRQAWADVKKHIETQITAVRGEA 1116
L ERC +T V+ K + + NV+PL+ C+KE+ + E+ GK+ +R+ + +D +I L + DL AG+ V N +V IL+ LQP PKLA VP GVPMGQSWHT R+G +DRV +ILG +GGP +AAL GRSG+GKTTAAAAMVGER GPI P E E+QA R+DR+RA F DGVVWLRVGKG G ADRLP LMRKLA+ L + + ED +K+ V + L+C VVADDVWE VVEKL+ETG W+LLT R+ S+VEP+E V +D L + EA+ LRGAARLP + L D A+++L++C VAMD+AFVGSWSSVRT ++ PKS +AWA V I Q+ VRG A
Sbjct: 60 LCERCCGITVQVVEKLKGPTPLMVNVSPLEDCVKELEEVAERYGKKSCCTRLTHFQKDDEDIRDLEKRISTAIDDLTAAGVVEVGNLMQQQVGEILARLQPRPKLAPVPPGVPMGQSWHTMRDGVVDRVYDILGGDGGPAVAALGGRSGAGKTTAAAAMVGERQGPIHPLARENEEQAGTRLDRLRARFSDGVVWLRVGKGAGVADRLPLLMRKLAKALHEEVLKSYVDGPGIGEDGESYVKKIVEQESLKCRVVADDVWEPPVVEKLRETGMWILLTARNPSMVEPNERVFVDRLEKMEAQNVLRGAARLPPGQSLCDVAMKVLEVCGYVAMDIAFVGSWSSVRTVDNCAPKSSRAWAGVVAEITAQMDDVRGHA 435
BLAST of mRNA_S-firma_M_contig9908.20894.1 vs. uniprot
Match: A0A6H5K0A6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0A6_9PHAE) HSP 1 Score: 336 bits (862), Expect = 1.000e-99 Identity = 190/330 (57.58%), Postives = 229/330 (69.39%), Query Frame = 1
Query: 283 ILSHLQPSPKLAAVPNGVPMGQSWHTSREGAMDRVCEILGREGGPGLAALAGRSGSGKTTAAAA-MVGER-GPIRPRVGETEDQARARMDRVRAMFPDGVVWLRVGKGEGAADRLPHLMRKLAQLLARTTQRFTRNFEEDPVGTMKREVSERGLR-CLVVADDVWEASVVEKLKETGTWLLLTTRDVSIVEPHETVMLDELTEAEAEGALRGAARLPAHERLNDDAVEILKICRCVAMDVAFVGSWSSVRTGNDGVPKSRQAWADVKKHIETQITAVRGEAGL--AGEMGDLEVNRLAVLRAGFKYLGAEHPLAQELYSALAVFPDGHAF 1257
+ + L P PKL +VP GVPMGQSWHT R+G +DRV ILG +GGP AAL G+ G+GKTTAAAA MVGER GPI P E E+QAR R+DR+RA F DGV+WLRVGKG GA+DRLP LMRKLA+ L EE +K V G+ CLVVA+DVWE VVEKL+ETG W+LLTTR+ S+VEP+E V +D L E EA+ LR AARLP + L D A+++L++C VAMD+AFVGSWSSV T + PKS +AWA V I Q+ VR A A + L++NRLAV R G KYLG E PLAQ LY+ LAVFPDGH+F
Sbjct: 268 VQARLPPRPKLVSVPPGVPMGQSWHTMRDGVVDRVYAILGGDGGPAAAALGGQRGAGKTTAAAAAMVGERQGPIHPLAHENEEQARTRLDRLRARFSDGVMWLRVGKGAGASDRLPLLMRKLAKAL----------HEE----VLKSHVDAPGVAACLVVAEDVWELPVVEKLRETGMWILLTTRNPSMVEPNEKVFVDRLEEMEAQNVLRRAARLPPGQSLCDAAMKVLEVCGYVAMDIAFVGSWSSVNTVGNFAPKSSRAWAGVVTEITAQMDDVRRHAQFRNADAVDHLDINRLAVFRTGLKYLGREDPLAQALYAMLAVFPDGHSF 583
BLAST of mRNA_S-firma_M_contig9908.20894.1 vs. uniprot
Match: A0A6H5KJ30_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ30_9PHAE) HSP 1 Score: 326 bits (835), Expect = 3.700e-92 Identity = 217/580 (37.41%), Postives = 307/580 (52.93%), Query Frame = 1
Query: 1 EESAALHERCTYLTACVIVKCRRAS-SETNVAPLDACLKEVAKSIEQCGKRGRISRVLNASRDGAEIVRLNASLDRLSGDLGLAGIATVENKV-------------------------DTILSHLQPSP-KLAAVPNGVPMGQSWHTSREGAMDRVCEILGREGGPGLAALAGRSGSGKTTAAAAMVGERGPIRPRVGETEDQARARMDRVRAMFPDGVVWLRVGKGEGAADRLPHLMRKLAQLLARTTQRFTRNFEEDPVGTMKREVSE----RGLRCLVVADDVWEASVVEKLKETGTWLLLTTRDVSIVE--PHETVMLDELTEAEAEGALRGAARLPAHERLNDDAVEILKICRCVAMDVAFVGSWSSVRTGNDGVPKSRQAWADVKKHIETQITAVRGEA-GLAGEMGDL-EVNRLAVLRAGFKYL--GAEHPLAQELYSALAVFPDGHAFSLKDAAVLMKDDESYADQTQITMDAVATLERWGVLRTSKRNAY---YTILEYRMHDAHVEFAREKLMDRGDICKQAVRRWTSHVSQLKNIRGVDLYALLGIWKALERVGGSGWWASRPYDAQLA 1620
EE L+ RC +LT CVIVK R++S SE +V+P++ CL+ + +E+CG RG+++RVLNAS D +I R+ A++ L +L LAG+A +E K + I L +P K A +P P+ +SWH R ++RV E L +GGP L L G SGSGKTTAA+ +V DRLP LM +LA ++ +D +K + GL+CL V D+VWE VV +L E G W+LL+TRD +V E V ++EL+E EAE LR AA LP RL DDAV+++++C VAMD+AF G S+VR +D R AW+ + T+++ +GE G+ G + + + R AV++AGF L G++ Q LY +LAV PDG F++KDAAVL+ D A+ V LERW L S R Y + Y +HDAH +FAREKLMDRGD+C+ A+ RWT ++S + +R V + + +W E+VGG GW +RPY+A LA
Sbjct: 43 EELQTLYRRCVFLTTCVIVKSRQSSFSEMDVSPVEECLEAAGELVERCGGRGKMTRVLNASSDKDQIARMKANIRDLEANLSLAGVAILEGKTSDLRATVERMAKIQAATQEVILANTEIITDRLSKTPAKPAKIPKSTPIWKSWHVERFDVVERVFEPLTADGGPPLVGLVGDSGSGKTTAASEIV----------------------------------------RSNEDRLPSLMLQLAHMVYEEIGGRRPATSDDGTAYIKERMHRGHGGEGLKCLGVVDNVWEKEVVCELLEAGMWVLLSTRDEELVTGWEGEVVEVNELSEVEAESVLRKAAELPPETRLPDDAVDLIELCGRVAMDLAFGGRLSTVRGRSD-----RTAWSKAASKVRTEMS--KGECEGVRGTVVETRDARRKAVVQAGFGDLAIGSDDERVQRLYLSLAVLPDGRRFTVKDAAVLIYDRMPSAEDEASAAGVVEILERWSAL-CSIRGCYRMAWRGSHYVLHDAHSDFAREKLMDRGDVCRPALVRWTRNISSVDTLRAVRWHEVRDLWLGAEQVGGDGWKITRPYEAALA 574 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig9908.20894.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_M_contig9908.20894.1 >prot_S-firma_M_contig9908.20894.1 ID=prot_S-firma_M_contig9908.20894.1|Name=mRNA_S-firma_M_contig9908.20894.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=713bp MGQSWHTSREGAMDRVCEILGREGGPGLAALAGRSGSGKTTAAAAMVGERback to top mRNA from alignment at S-firma_M_contig9908:2..3662+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_M_contig9908.20894.1 ID=mRNA_S-firma_M_contig9908.20894.1|Name=mRNA_S-firma_M_contig9908.20894.1|organism=Sphaerotrichia firma Sfir_13m male|type=mRNA|length=3661bp|location=Sequence derived from alignment at S-firma_M_contig9908:2..3662+ (Sphaerotrichia firma Sfir_13m male)back to top Coding sequence (CDS) from alignment at S-firma_M_contig9908:2..3662+ >mRNA_S-firma_M_contig9908.20894.1 ID=mRNA_S-firma_M_contig9908.20894.1|Name=mRNA_S-firma_M_contig9908.20894.1|organism=Sphaerotrichia firma Sfir_13m male|type=CDS|length=4278bp|location=Sequence derived from alignment at S-firma_M_contig9908:2..3662+ (Sphaerotrichia firma Sfir_13m male)back to top |