mRNA_S-firma_M_contig98.20785.1 (mRNA) Sphaerotrichia firma Sfir_13m male
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Overview
Homology
BLAST of mRNA_S-firma_M_contig98.20785.1 vs. uniprot
Match: D7FPT6_ECTSI (Heat Shock transcription factor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPT6_ECTSI) HSP 1 Score: 501 bits (1291), Expect = 2.500e-152 Identity = 473/952 (49.68%), Postives = 527/952 (55.36%), Query Frame = 3
Query: 147 NKSSSMALAVHRGHGRCEED--DDVYA-GADTSGIEVVSAGSVTSFVRKLFQMVQGECDSIVGFVADGTAFEVKDPRRLEQDILPKYFRHSRFQSLVRQLNFYSFKKISKERSVWIYKHAFFRRDEPELLHALKRKTNQHGTPGPIGRVAIG-----GGADGDDLMAARSPVVDRSLSRDAHDNSKPRSRGPMFLP-RHG-APASDFPPQHHTNHPRHNHHTSPPPFSDHQHQYPNTSGRTHPRPPHHPLS---------------------APRKSGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWXXXXXXXXXXXXXXXXXXXEYEXXXXXXXGMARNQGYNH---------------------GPATGDTGGDRXXXXXXXXXXXXXXIGGAAVS---------SDKEQALAIWGLSALCQVASSATEAPLVND-EARGRTTGS-----------SRRLPDDRGRQQQKRHRGPGPASTAARGRRGWGVRDESSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANSVHSNPQYERRQNAAADRGNDMTTXXXXXVVSQQRQRQHQRPSGSGGVFCPTWDWGKAAAEPAIRLPGSFVDRRFEEVDEQVGEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARKFDAKRAARVEKKTTEPAKVSPSLAEARSTAAPVTTTPQPR------------DLKADIEAETKVGLEGIGALFNQFCAGEDGGGRRLNTNASTSVFLATVTNSGDSGLREMSVFCAGPAGRAPDEASPASLVRQVSLFLQSEGAVAQDLRVYAEALDPAAVDVVV--GRARQWREEEEEQPLSTDGAKLLRVFCRYAACRLGRALEVASCAAAAGAEADTEALPAGGADDEDKTARQMLLRQSAVAQRITPRLDECRWKWWRAAVRFS 2741
++++ M +A+ H R E D +D Y+ D G++VVSAGSVTSFVRKLFQMVQGECDSIVGFVADGTAFEVKDPRRLEQDILPKYFRHSRFQSLVRQLNFYSFKKISKERSVWIYKHAFFRRDEPELLHALKRKTNQHG P +G G GGAD ++ +P+V SLSRD D++K RSRG FLP RH S F P HH H P FS+ QHQ H PPH+P A RK+G XXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXX GM + H GPA GD G XXXXXXXX +DK+ ALA++GLSALCQVAS ATEAP +D E+ G+ SRRL D RQ QKRHRG GP + A RRGW V++ S XXXXXXXXXXXXXXXXXXX SGSGGVFCPTWDWG+AA EPAIRLPGSFVDRRFEEVD+QV + XXXXXXXXXXXXXXXX AR A R + +VS SLA + +PR D +AD++AE VGL+GIGA F+ C+ G T AS SVFLATV NSGD GLREM+VFCAGPAG+APD ASPA L R+VSLFLQSE AVA+DLRVYAEALDPAAVDVVV QPLS DGAKLLRVFCR+AACRLGRALEVAS A + AE +L R A A+R+ P+LD CRWKWWRAAVRFS
Sbjct: 323 SETAGMVVALEHRHDRNEPDLDEDAYSRSGDVPGMDVVSAGSVTSFVRKLFQMVQGECDSIVGFVADGTAFEVKDPRRLEQDILPKYFRHSRFQSLVRQLNFYSFKKISKERSVWIYKHAFFRRDEPELLHALKRKTNQHGAPARVGGGVAGLGVGDGGADDMMVVDRAAPIVGGSLSRDPLDSNKARSRGLSFLPPRHADGGVSAFRPPHHDYH-------HSPSFSN-QHQ------EHHQHPPHYPXXXXXXXXXXXXXXXXXXXXXXPAHRKNGSSGSGRVYHASSSRGAGGGPSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGPGVEYDRRSGGVDGGNGMRATKAGGHRGFDDGRSPSSSSSSQAYSRQGPAIGDDRGSAVGRQRGXXXXXXXXXXXXXXXXXXXXXXXVTDKDHALALFGLSALCQVAS-ATEAPAAHDNESIGQMDEDGGXXXXXXXRGSRRLSDVVDRQPQKRHRGVGPDADAG-SRRGWAVQESSGXXXXXXXXXXXXXXXXXXX-----------------------------------------------------XXXXXXXXXXXXTSGSGGVFCPTWDWGRAACEPAIRLPGSFVDRRFEEVDQQVVKXXXXXXXXXXXXXXXXXRDQGESRQEFAQKSDDEGPE--ARPDTGSAAHRRGEAMAITDEVSVSLAGSD----------EPRXXXXXXXXXXXXDAQADMKAEADVGLDGIGAFFSHCCSAAASGND--TTRASESVFLATVANSGDGGLREMAVFCAGPAGKAPDAASPAYLAREVSLFLQSEEAVAEDLRVYAEALDPAAVDVVVEGSLGSSSNPVPVTQPLSPDGAKLLRVFCRFAACRLGRALEVASLVAES-AEXXXXXXXXXXXXXXXXXXGLLLQRHGAFARRVAPQLDSCRWKWWRAAVRFS 1190
BLAST of mRNA_S-firma_M_contig98.20785.1 vs. uniprot
Match: A0A6H5L0A5_9PHAE (HSF_DOMAIN domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0A5_9PHAE) HSP 1 Score: 484 bits (1246), Expect = 1.180e-148 Identity = 463/943 (49.10%), Postives = 525/943 (55.67%), Query Frame = 3
Query: 162 MALAVHRGHGRCE--EDDDVYA-GADTSGIEVVSAGSVTSFVRKLFQMVQGECDSIVGFVADGTAFEVKDPRRLEQDILPKYFRHSRFQSLVRQLNFYSFKKISKERSVWIYKHAFFRRDEPELLHALKRKTNQHGTPGPIGRVAIG---GGADGDDLMAA--RSPVVDRSLSRDAHDNSKPRSRGPMFLP-RH---GAPASDFP--------PQHHTNHPRHNHHTSPPPFSD---------------------HQHQYPNTSGRTHPRPPHHPLSAPRKSGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWXXXXXXXXXXXXXXXXXXXEYEXXXXXXXGMARNQGYNH-GPATGDTGGDRXXXXXXXXXXXXXXIGGAAVS-----------SDKEQALAIWGLSALCQVASSATEAPLVNDEARGRTTGS-----------SRRLPDDRGRQQQKRHRGPGPASTAARGRRGWGVRDESSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANSVHSNPQYERRQNAAADRGNDMTTXXXXXVVSQQRQRQHQRP--------SGSGGVFCPTWDWGKAAAEPAIRLPGSFVDRRFEEVDEQVGEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARKFDAKRAARVEKKTTEPAKVS-PSLA-------EARST-AAPVTTTPQPRDLKADIEAETKVGLEGIGALFNQFCAGEDGGGRRLNTNASTSVFLATVTNSGDSGLREMSVFCAGPAGRAPDEASPASLVRQVSLFLQSEGAVAQDLRVYAEALDPAAVDVVVGRA--RQWREEEEEQPLSTDGAKLLRVFCRYAACRLGRALEVASCAAAAGAEADTEALPAGGADDEDKTARQMLLRQSAVAQRITPRLDECRWKWWRAAVRFS 2741
M +A+ H R E D+D Y+ D G++V+SAGSVTSFVRKLFQMVQGECDSIVGFVADGTAFEVKDPRRLEQDILPKYFRHSRFQSLVRQLNFYSFKKISKERSVWIYKHAFFRRDEPELLHALKRKTNQHG P +G G GG DD+M +P+V SLSRD N+K RS G FLP RH GA + P P H H+ H H+ + SGR + H S+ GG XXXXXXXXXXX X + E+ + +Q Y+ GPA GD G XXXXXX ++K+ ALA++GLSALCQVAS ATEAP + + G+ SRRL D R+QQKRHRG GP + A R RRGW V++ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXX SGSGGVFCPTWDWG+AA EPA+RLPGSFVDRRFEEVD+QV +XXXXXXXXXXXXXXXXXX AR + A R + P + S P ++ E R T APV P+PRD +AD++AE VGLEGIGA F+ C+ G T A S FLATV NSGD GLREM+VFCAGPAG+APD A A L R+VSLFLQSE AVA+DLRVYAEALDPAAVD+VV + QPLS DG KLLRVFCR+AACRLGRALEVAS A + AE +L R A A+R+ P+LD CRWKWWRAAVRFS
Sbjct: 1 MVVALEHRHDRNELDHDEDAYSRSGDVPGMDVMSAGSVTSFVRKLFQMVQGECDSIVGFVADGTAFEVKDPRRLEQDILPKYFRHSRFQSLVRQLNFYSFKKISKERSVWIYKHAFFRRDEPELLHALKRKTNQHGVPARVGGGVAGLGVGGGGADDMMVVDRAAPIVGGSLSRDPLANNKARSHGLSFLPPRHADGGAGGAFRPXXXXXXXSPSFSNQHQEHHQHXXXXXXXXXXXXXXXXXXXXXXXXXXRPAHRKNGSSGSGRMY-----HASSSRGAGGGPSTGGAAVPXXXXXXXXXXXGAPGFAWAGAGGRPVSSSXGPGAEYDRRSGGVDGGSGMRATKAGEHRGFDDGRSSSSSSQAYSRQGPAIGDDRGSALGRQRGDGXXXXXXXXXXXXXXXXXXXXXXXVTNKDHALALFGLSALCQVAS-ATEAPAAHKGSIGQVDEDGXXXXXXXXRGSRRLSDGVDRRQQKRHRGVGPEAEA-RSRRGWAVQESLGDEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSGSGGVFCPTWDWGRAACEPAMRLPGSFVDRRFEEVDQQV-VKXXXXXXXXXXXXXXXXXXRDEGESRQEFAQESDDEGPEARPDTSSTAHRRGEAIVTPDEASLPHVSVSFVGSDEPRPTPTAPVP--PRPRDTRADMKAEADVGLEGIGAFFSHCCSAASGND---TTRALESGFLATVANSGDGGLREMAVFCAGPAGKAPDAAPAAYLAREVSLFLQSEEAVAEDLRVYAEALDPAAVDIVVEESLGSSSNPAAVTQPLSPDGGKLLRVFCRFAACRLGRALEVASLVAES-AEEXXXXXXXXXXXXXXXXQGLLLQRHGAFARRVAPQLDSCRWKWWRAAVRFS 929
BLAST of mRNA_S-firma_M_contig98.20785.1 vs. uniprot
Match: A0A7S2ANP9_9STRA (Hypothetical protein n=4 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2ANP9_9STRA) HSP 1 Score: 146 bits (368), Expect = 6.490e-33 Identity = 78/134 (58.21%), Postives = 95/134 (70.90%), Query Frame = 3
Query: 153 SSSMALAVHRGHGRCEEDDDVYAGADTSGIEVVSAGSVTSFVRKLFQMVQGECDSIVGFVADGTAFEVKDPRRLEQDILPKYFRHSRFQSLVRQLNFYSFKKISKERSVWIYKHAFFRRDEPELLHALKRKTNQ 554
S+ MA + C ED + G + GI + TSFVRKL+ +V E D IVGF+ DG++FEVKDP+RLE ++LPKYFRHSRFQSLVRQLNFYSFKK SKER +WIY+H F RD+P LL LKRKT+Q
Sbjct: 7 SARMACSPPSRVEECPED--ITEGGEMLGI------AKTSFVRKLYDLVTCESDDIVGFLPDGSSFEVKDPKRLEVEVLPKYFRHSRFQSLVRQLNFYSFKKASKERHMWIYRHELFHRDKPVLLEGLKRKTSQ 132
BLAST of mRNA_S-firma_M_contig98.20785.1 vs. uniprot
Match: A0A4D9D5W3_9STRA (HSF_DOMAIN domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D5W3_9STRA) HSP 1 Score: 132 bits (332), Expect = 5.320e-28 Identity = 65/109 (59.63%), Postives = 78/109 (71.56%), Query Frame = 3
Query: 219 AGADTSGIEVVSAGSVTSFVRKLFQMVQGECDSIVGFVADGTAFEVKDPRRLEQDILPKYFRHSRFQSLVRQLNFYSFKKISKERSVWIYKHAFFRRDEPELLHALKRK 545
A D I+ S +F+RKLFQMV E + I+ F DG +F VKDP RLE ++LPKYFRHSRFQSLVRQLNFY FKKISKER +WIY+H F++ +P LL LKRK
Sbjct: 45 ASEDDEDIQSDLVPSANTFIRKLFQMVTSENNDIISFTPDGLSFHVKDPVRLENEVLPKYFRHSRFQSLVRQLNFYDFKKISKERVIWIYRHKLFQQGKPHLLDDLKRK 153
BLAST of mRNA_S-firma_M_contig98.20785.1 vs. uniprot
Match: I2CQX2_NANGC (HSF_DOMAIN domain-containing protein (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CQX2_NANGC) HSP 1 Score: 125 bits (313), Expect = 2.300e-27 Identity = 64/117 (54.70%), Postives = 83/117 (70.94%), Query Frame = 3
Query: 267 TSFVRKLFQMVQGECDSIVGFVADGTAFEVKDPRRLEQDILPKYFRHSRFQSLVRQLNFYSFKKISKERSVWIYKHAFFRRDEPELLHALKRKT-NQHGTPGPIG-RVAIGGGADGD 611
T FV+KLF MV E SI+ F DG +FEVK+P+RLE ++LP+Y+RH F S VRQLNFY+FKK+SKER++WIY+H F+R P+LL LKRKT N H P + +GGG G+
Sbjct: 25 TCFVKKLFTMVAVEDPSILSFTPDGKSFEVKNPKRLESEVLPRYYRHGHFTSFVRQLNFYNFKKVSKERNIWIYRHECFQRGRPQLLDMLKRKTSNAHHPHHPYNIQHTMGGGRAGE 141
BLAST of mRNA_S-firma_M_contig98.20785.1 vs. uniprot
Match: B8BWZ1_THAPS (HSF_DOMAIN domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BWZ1_THAPS) HSP 1 Score: 123 bits (308), Expect = 2.030e-25 Identity = 64/128 (50.00%), Postives = 83/128 (64.84%), Query Frame = 3
Query: 258 GSVTSFVRKLFQMVQGECDSIVGFVADGTAFEVKDPRRLEQDILPKYFRHSRFQSLVRQLNFYSFKKISKERSVWIYKHAFFRRDEPELLHALKRKTNQHGTPGPIGRVAIGGGADGDDLMAARSPVV 641
G+ + FV KLFQMV G D IV +V G AF + D RLE++ LP YFRHSRFQSLVRQLNFY+F+K+++ER+ W+Y H F RD+ E LH L+R+T PG GR++ G D SP +
Sbjct: 20 GAPSGFVMKLFQMVNGAEDDIVSWVPSGQAFRINDISRLEKETLPSYFRHSRFQSLVRQLNFYNFRKVNRERTFWVYYHPLFHRDQEENLHNLRRRT----CPGVDGRISKRNGGPNLDRDGFASPSL 143
BLAST of mRNA_S-firma_M_contig98.20785.1 vs. uniprot
Match: A0A4D9D0Y9_9STRA (HSF_DOMAIN domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D0Y9_9STRA) HSP 1 Score: 124 bits (311), Expect = 4.360e-25 Identity = 57/95 (60.00%), Postives = 74/95 (77.89%), Query Frame = 3
Query: 267 TSFVRKLFQMVQGECDSIVGFVADGTAFEVKDPRRLEQDILPKYFRHSRFQSLVRQLNFYSFKKISKERSVWIYKHAFFRRDEPELLHALKRKTN 551
T FV+KLF MV E SI+ F DG +FEVK+P+RLE ++LP+Y+RH F S VRQLNFY+FKK+SKER++WIY+H F+R P+LL LKRKT+
Sbjct: 25 TCFVKKLFTMVAVEDPSILSFTPDGKSFEVKNPKRLESEVLPRYYRHGHFTSFVRQLNFYNFKKVSKERNIWIYRHECFQRGRPQLLEMLKRKTS 119
BLAST of mRNA_S-firma_M_contig98.20785.1 vs. uniprot
Match: A0A7S2M136_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2M136_9STRA) HSP 1 Score: 117 bits (293), Expect = 3.020e-24 Identity = 56/97 (57.73%), Postives = 70/97 (72.16%), Query Frame = 3
Query: 258 GSVTSFVRKLFQMVQGECDSIVGFVADGTAFEVKDPRRLEQDILPKYFRHSRFQSLVRQLNFYSFKKISKERSVWIYKHAFFRRDEPELLHALKRKT 548
G+ + FV KL+QMV G D IV +V G AF + D RLE D LP YFRHSRFQSLVRQLNFY+F+KI++ER+ W+Y H F RD P+ L L+R+T
Sbjct: 46 GTPSGFVLKLYQMVNGAPDDIVSWVPSGEAFRITDLSRLESDTLPSYFRHSRFQSLVRQLNFYNFRKINRERTFWVYYHPLFHRDHPDKLCELRRRT 142
BLAST of mRNA_S-firma_M_contig98.20785.1 vs. uniprot
Match: A0A7S1ZYH7_9STRA (Hypothetical protein (Fragment) n=4 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZYH7_9STRA) HSP 1 Score: 120 bits (300), Expect = 5.260e-24 Identity = 67/145 (46.21%), Postives = 86/145 (59.31%), Query Frame = 3
Query: 204 DDDVYAGADTSGIEVVSAGSVTSFVRKLFQMVQGECDSIVGFVADGTAFEVKDPRRLEQDILPKYFRHSRFQSLVRQLNFYSFKKISKERSVWIYKHAFFRRDEPELLHALKRKTNQHGTPGPIGRVAIGGGADGDDLMAARSPV 638
DD+ A + G V S FV KLFQMV G D ++ ++ G AF + D RLE + LP +FRHSRFQSLVRQLNFY+F+K+++ER+ WIYKH F RD P LH L+R+T PG GR G + + SPV
Sbjct: 3 DDNTKETASSDGSPVPSG-----FVLKLFQMVNGAPDDVISWIPSGEAFRISDLNRLENETLPSFFRHSRFQSLVRQLNFYNFRKVNRERTFWIYKHPLFHRDRPYELHKLRRRT----CPGVDGRKQRGNDFGFEGNRGSGSPV 138
BLAST of mRNA_S-firma_M_contig98.20785.1 vs. uniprot
Match: B7G2S1_PHATC (Predicted protein n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G2S1_PHATC) HSP 1 Score: 115 bits (288), Expect = 6.410e-23 Identity = 58/106 (54.72%), Postives = 77/106 (72.64%), Query Frame = 3
Query: 267 TSFVRKLFQMVQGECDSIVGFVADGTAFEV-KDPRRLEQDILPKYFRHSRFQSLVRQLNFYSFKKISKERSVWIYKHAFFRRDEPELLHALKRKTNQHGTPGPIGR 581
+ F+ KLFQMV G D ++ + +G AF + D RLE + LP+YFRH+RFQSLVRQLNFYSF+KI++ER+VWIYKH+ F RD PE L+ ++R+T PG GR
Sbjct: 28 SGFILKLFQMVNGAPDKVISWTPNGDAFIIGSDLNRLESETLPQYFRHNRFQSLVRQLNFYSFRKINRERNVWIYKHSLFHRDRPEDLNMVRRRT----CPGMDGR 129 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig98.20785.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_M_contig98.20785.1 >prot_S-firma_M_contig98.20785.1 ID=prot_S-firma_M_contig98.20785.1|Name=mRNA_S-firma_M_contig98.20785.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=861bp MALAVHRGHGRCEEDDDVYAGADTSGIEVVSAGSVTSFVRKLFQMVQGECback to top mRNA from alignment at S-firma_M_contig98:14327..21419+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_M_contig98.20785.1 ID=mRNA_S-firma_M_contig98.20785.1|Name=mRNA_S-firma_M_contig98.20785.1|organism=Sphaerotrichia firma Sfir_13m male|type=mRNA|length=7093bp|location=Sequence derived from alignment at S-firma_M_contig98:14327..21419+ (Sphaerotrichia firma Sfir_13m male)back to top Coding sequence (CDS) from alignment at S-firma_M_contig98:14327..21419+ >mRNA_S-firma_M_contig98.20785.1 ID=mRNA_S-firma_M_contig98.20785.1|Name=mRNA_S-firma_M_contig98.20785.1|organism=Sphaerotrichia firma Sfir_13m male|type=CDS|length=5166bp|location=Sequence derived from alignment at S-firma_M_contig98:14327..21419+ (Sphaerotrichia firma Sfir_13m male)back to top |