mRNA_S-firma_M_contig9751.20744.1 (mRNA) Sphaerotrichia firma Sfir_13m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-firma_M_contig9751.20744.1
Unique NamemRNA_S-firma_M_contig9751.20744.1
TypemRNA
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Homology
BLAST of mRNA_S-firma_M_contig9751.20744.1 vs. uniprot
Match: D8LEJ8_ECTSI (Glycerol kinase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEJ8_ECTSI)

HSP 1 Score: 379 bits (972), Expect = 2.120e-125
Identity = 179/203 (88.18%), Postives = 192/203 (94.58%), Query Frame = 1
Query:    1 YVASIDQGTSSSRCIVFGRDGSIVSEHQMEHEQFYPQPGRVEHDADEIWRNVEMCVKSALNAAGLDTSDLAAVGITNQRESTMVWDKNTGTPLHRLIVWNDVRTEPICRELKVNGGADRFRDRTGLPISPYFSATKLMWLLDNVPGLREVAENGDALFGTMDSWLMWKLTGGKMHVTDVTNASRTNLMSLKGLHWDESILQEL 609
            YVASIDQGTSSSRCIVFG+DGSIV+EHQ+EHEQFYP+PG VEHDA+EIWRNVEMCVKSALN AGL   DLAAVGITNQREST+VWD+NTGTPLH LIVWNDVRTE ICR+LK NGGADRFR RTGLPISPYFSATKLMWLLDNV GLRE+AE GDALFGTMDSWLMWKLTGG+MH+TDVTNASRTNLMSL+GLHWD+SILQEL
Sbjct:   33 YVASIDQGTSSSRCIVFGKDGSIVAEHQIEHEQFYPRPGCVEHDAEEIWRNVEMCVKSALNIAGLGAPDLAAVGITNQRESTLVWDRNTGTPLHPLIVWNDVRTESICRDLKANGGADRFRGRTGLPISPYFSATKLMWLLDNVAGLRELAEKGDALFGTMDSWLMWKLTGGRMHITDVTNASRTNLMSLEGLHWDKSILQEL 235          
BLAST of mRNA_S-firma_M_contig9751.20744.1 vs. uniprot
Match: UPI0005647201 (glycerol kinase GlpK n=1 Tax=Streptacidiphilus oryzae TaxID=348818 RepID=UPI0005647201)

HSP 1 Score: 271 bits (693), Expect = 1.390e-84
Identity = 127/207 (61.35%), Postives = 154/207 (74.40%), Query Frame = 1
Query:    1 YVASIDQGTSSSRCIVFGRDGSIVSEHQMEHEQFYPQPGRVEHDADEIWRNVEMCVKSALNAAGLDTSDLAAVGITNQRESTMVWDKNTGTPLHRLIVWNDVRTEPICRELKVNGGADRFRDRTGLPISPYFSATKLMWLLDNVPGLREVAENGDALFGTMDSWLMWKLTGGK---MHVTDVTNASRTNLMSLKGLHWDESILQELR 612
            Y+A+IDQGT+SSRCI+FG DG IVS  Q EH Q +PQPG VEHDA EIW  V+  ++ AL  AGL   D+ A+GITNQRE+T++WDKNTG P+H  IVW D RTE +C+EL  N G DRFR  TGLP+S YF+  K+ WLLDNV GLRE AE G+ LFGTMD+W++W LTGG     HVTDVTNASRT LM+L  L WD  IL+ ++
Sbjct:    9 YIAAIDQGTTSSRCIIFGADGRIVSVDQQEHRQIFPQPGWVEHDATEIWTRVQSVIRGALQKAGLSKDDIRAIGITNQRETTLLWDKNTGEPVHNAIVWQDTRTEGLCKELGRNVGQDRFRRETGLPLSSYFAGPKIRWLLDNVEGLRERAERGEILFGTMDTWVIWNLTGGVNGGRHVTDVTNASRTMLMNLHTLQWDPKILESMK 215          
BLAST of mRNA_S-firma_M_contig9751.20744.1 vs. uniprot
Match: A0A512BRW0_9HYPH (Glycerol kinase n=3 Tax=Microvirga TaxID=186650 RepID=A0A512BRW0_9HYPH)

HSP 1 Score: 270 bits (691), Expect = 1.810e-84
Identity = 124/201 (61.69%), Postives = 154/201 (76.62%), Query Frame = 1
Query:    1 YVASIDQGTSSSRCIVFGRDGSIVSEHQMEHEQFYPQPGRVEHDADEIWRNVEMCVKSALNAAGLDTSDLAAVGITNQRESTMVWDKNTGTPLHRLIVWNDVRTEPICRELKVNGGADRFRDRTGLPISPYFSATKLMWLLDNVPGLREVAENGDALFGTMDSWLMWKLTGGKMHVTDVTNASRTNLMSLKGLHWDESILQ 603
            YV +IDQGT+SSR IVF R GSIVS  Q EHEQ YP+PG VEHD  EIWRN +  ++ AL A GL   DLAA+GITNQRE+T++WD++TG PLH  +VW D R +P+ ++   +GG DR RD+TGLP++ YFS  KL WLLDNVPG RE AE GD LFG +D+WL+W LTGG+ H+TDVTNASRT LM+L+ L WD+ IL+
Sbjct:    4 YVGAIDQGTTSSRFIVFDRSGSIVSVAQKEHEQIYPKPGYVEHDPLEIWRNTQEVIEQALAAKGLKPGDLAAIGITNQRETTLIWDRHTGKPLHNALVWQDTRVDPMVQDFARDGGYDRLRDKTGLPLTSYFSGLKLRWLLDNVPGAREKAEAGDVLFGNVDTWLVWNLTGGRRHITDVTNASRTQLMNLRDLAWDDDILR 204          
BLAST of mRNA_S-firma_M_contig9751.20744.1 vs. uniprot
Match: A0A1H7UFH3_STRJI (Glycerol kinase n=22 Tax=Streptomycetaceae TaxID=2062 RepID=A0A1H7UFH3_STRJI)

HSP 1 Score: 270 bits (691), Expect = 2.700e-84
Identity = 128/206 (62.14%), Postives = 154/206 (74.76%), Query Frame = 1
Query:    1 YVASIDQGTSSSRCIVFGRDGSIVSEHQMEHEQFYPQPGRVEHDADEIWRNVEMCVKSALNAAGLDTSDLAAVGITNQRESTMVWDKNTGTPLHRLIVWNDVRTEPICRELKVNGGADRFRDRTGLPISPYFSATKLMWLLDNVPGLREVAENGDALFGTMDSWLMWKLTGGK---MHVTDVTNASRTNLMSLKGLHWDESILQEL 609
            Y+A+IDQGT+SSRCIVFG DG IV+  Q EH Q +PQPG VEHDA+EIW  V+  V  AL  AGL   D+ A+GITNQRE+T++WDKNTG P+H  +VW D RTE +C+EL  N G DRFR  TGLP++ YF+  K+ WLLDNV GLRE AE G+ LFGTMD+W++W LTGG     HVTDVTNASRT LM+L  L WDESI Q +
Sbjct:    8 YIAAIDQGTTSSRCIVFGADGRIVAVDQQEHSQIFPQPGWVEHDAEEIWTRVQSVVSGALAKAGLTRDDIRAIGITNQRETTVLWDKNTGKPVHNALVWQDTRTEELCKELGRNVGQDRFRRETGLPLASYFAGPKIRWLLDNVEGLRERAERGEILFGTMDTWVIWNLTGGVDGGKHVTDVTNASRTMLMNLHTLQWDESIAQSM 213          
BLAST of mRNA_S-firma_M_contig9751.20744.1 vs. uniprot
Match: A0A1A9QRV0_STRA9 (Glycerol kinase n=20 Tax=Streptomyces TaxID=1883 RepID=A0A1A9QRV0_STRA9)

HSP 1 Score: 270 bits (690), Expect = 3.710e-84
Identity = 126/206 (61.17%), Postives = 156/206 (75.73%), Query Frame = 1
Query:    1 YVASIDQGTSSSRCIVFGRDGSIVSEHQMEHEQFYPQPGRVEHDADEIWRNVEMCVKSALNAAGLDTSDLAAVGITNQRESTMVWDKNTGTPLHRLIVWNDVRTEPICRELKVNGGADRFRDRTGLPISPYFSATKLMWLLDNVPGLREVAENGDALFGTMDSWLMWKLTGGK---MHVTDVTNASRTNLMSLKGLHWDESILQEL 609
            ++A+IDQGT+SSRCIVF RDG IVS  Q EHEQ +P+PG VEHDA EIW NV+  V  A+  AG+ ++D+ A+GITNQRE+T++WDKNTG P+H  IVW D RT+ +CREL  N G DRFR  TGLP++ YF+  K+ W+LDNV GLRE AE GD LFGTMDSW++W LTGG     HVTDVTNASRT LM+L  + WD+ I Q +
Sbjct:   10 FIAAIDQGTTSSRCIVFDRDGRIVSVDQKEHEQIFPKPGWVEHDAAEIWTNVQEVVAGAIEKAGITSADVKAIGITNQRETTLLWDKNTGEPVHNAIVWQDTRTDALCRELGRNVGQDRFRRETGLPLASYFAGPKIRWMLDNVEGLRERAERGDILFGTMDSWVIWNLTGGVDGGRHVTDVTNASRTMLMNLHNMEWDDKIAQSM 215          
BLAST of mRNA_S-firma_M_contig9751.20744.1 vs. uniprot
Match: A0A2D4CCV4_PYTIN (Glycerol kinase n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CCV4_PYTIN)

HSP 1 Score: 270 bits (689), Expect = 5.370e-84
Identity = 135/209 (64.59%), Postives = 160/209 (76.56%), Query Frame = 1
Query:    1 YVASIDQGTSSSRCIVFGRDGSIVSEHQMEHEQFYPQPGRVEHDADEIWRNVEMCVKSALNAAGLDTSDLAAVGITNQRESTMVWDKNTGTPLHRLIVWNDVRTEPICRELKVNG--------GADRFRDRTGLPISPYFSATKLMWLLDNVPGLREVAENGDALFGTMDSWLMWKLTGGKMHVTDVTNASRTNLMSLKGLHWDESILQ 603
            YV +IDQGT+SSR I F   G IV+ HQ+EH+Q YPQPG  EHDADEI+ NVE+CV+ AL +  +    LAAVGITNQRE+T+VWDKNTG PLH  IVW+D RT  I   LK NG        GADRFR  TGLPI+ YFSA KL+WLL+NVPGLRE AE G+ALFG +D+WL+WKL+GG +HVTDVTNASRTNLMSL+ L WD+ IL+
Sbjct:    6 YVGAIDQGTTSSRFIAFNHSGEIVATHQLEHKQIYPQPGWSEHDADEIFTNVEICVREALASKNIPLERLAAVGITNQRETTVVWDKNTGKPLHNAIVWHDARTADIVHHLK-NGAGEGFMGLGADRFRAVTGLPIATYFSAVKLIWLLENVPGLREKAEKGEALFGNIDTWLIWKLSGG-LHVTDVTNASRTNLMSLETLQWDDEILK 212          
BLAST of mRNA_S-firma_M_contig9751.20744.1 vs. uniprot
Match: A0A0C2HRG7_9DELT (Glycerol kinase n=2 Tax=Geoalkalibacter ferrihydriticus TaxID=392333 RepID=A0A0C2HRG7_9DELT)

HSP 1 Score: 269 bits (688), Expect = 6.640e-84
Identity = 125/207 (60.39%), Postives = 155/207 (74.88%), Query Frame = 1
Query:    1 YVASIDQGTSSSRCIVFGRDGSIVSEHQMEHEQFYPQPGRVEHDADEIWRNVEMCVKSALNAAGLDTSDLAAVGITNQRESTMVWDKNTGTPLHRLIVWNDVRTEPICRELKVNGGADRFRDRTGLPISPYFSATKLMWLLDNVPGLREVAENGDALFGTMDSWLMWKLTGGK----MHVTDVTNASRTNLMSLKGLHWDESILQEL 609
            YV ++DQGT+S+RC++F   G IV+ HQ+EHEQ YPQ G VEHDA EIW+  +  + +A+   GL  +D+AAVGITNQRE+T+VWD+ TG P    IVW D RT+ IC +L  NGG DRFR +TGLP++ YFS  KL W+LDNVPGLR  AE GDALFG MD+W++WKLTGG      HVTDVTNASRT LM+L+ L WD+ ILQEL
Sbjct:    4 YVVALDQGTTSTRCMIFNHGGEIVAHHQIEHEQLYPQAGWVEHDAMEIWKRTKDVIHAAMEKGGLVAADIAAVGITNQRETTLVWDRKTGQPYGNAIVWQDTRTDKICHQLAENGGQDRFRAKTGLPLATYFSGPKLKWMLDNVPGLRAAAERGDALFGNMDTWIIWKLTGGPGPQAAHVTDVTNASRTLLMNLETLDWDDEILQEL 210          
BLAST of mRNA_S-firma_M_contig9751.20744.1 vs. uniprot
Match: A0A7C4VTB7_9CHLR (Glycerol kinase n=1 Tax=Anaerolineae bacterium TaxID=2052143 RepID=A0A7C4VTB7_9CHLR)

HSP 1 Score: 268 bits (685), Expect = 1.870e-83
Identity = 123/202 (60.89%), Postives = 149/202 (73.76%), Query Frame = 1
Query:    1 YVASIDQGTSSSRCIVFGRDGSIVSEHQMEHEQFYPQPGRVEHDADEIWRNVEMCVKSALNAAGLDTSDLAAVGITNQRESTMVWDKNTGTPLHRLIVWNDVRTEPICRELKVNGGADRFRDRTGLPISPYFSATKLMWLLDNVPGLREVAENGDALFGTMDSWLMWKLTGGK---MHVTDVTNASRTNLMSLKGLHWDESI 597
            YVA+IDQGT+S+RC++F   G  V  HQMEHEQ YPQPG VEHD  EIW   +  +K AL  AG+  +D+AAVG+TNQRE+T+VWDK TG P H  +VW D RT+ IC EL  +GG DRFR + GLP++ YFS  K+ WLLDNVPGLRE AE GDA+FG +D+W++W LTGG     HVTDVTNASRT LM L G HWD+ I
Sbjct:    4 YVAAIDQGTTSTRCMIFNHAGESVGLHQMEHEQIYPQPGWVEHDPMEIWARTQDVIKGALQKAGITAADIAAVGVTNQRETTVVWDKKTGKPYHNALVWQDTRTDKICNELAKDGGQDRFRAQVGLPLATYFSGPKVKWLLDNVPGLREAAEKGDAIFGNIDTWVIWNLTGGPNGGAHVTDVTNASRTMLMDLDGTHWDDKI 205          
BLAST of mRNA_S-firma_M_contig9751.20744.1 vs. uniprot
Match: A0A0N0XTQ7_9ACTN (Glycerol kinase n=84 Tax=Streptomyces TaxID=1883 RepID=A0A0N0XTQ7_9ACTN)

HSP 1 Score: 268 bits (686), Expect = 2.020e-83
Identity = 127/206 (61.65%), Postives = 154/206 (74.76%), Query Frame = 1
Query:    1 YVASIDQGTSSSRCIVFGRDGSIVSEHQMEHEQFYPQPGRVEHDADEIWRNVEMCVKSALNAAGLDTSDLAAVGITNQRESTMVWDKNTGTPLHRLIVWNDVRTEPICRELKVNGGADRFRDRTGLPISPYFSATKLMWLLDNVPGLREVAENGDALFGTMDSWLMWKLTGGKM---HVTDVTNASRTNLMSLKGLHWDESILQEL 609
            ++A+IDQGT+SSRCIVF +DG IVS  Q EHEQ +P+PG VEHDA EIW NV+  V  A+  AG+   D+ A+GITNQRE+T++WDKNTG P+H  IVW D RT+ +C+EL  N G DRFR  TGLP++ YF+  K+ WLLDNV GLRE AE GD LFGTMDSW++W LTGG     HVTDVTNASRT LM+L  L WDE IL  +
Sbjct:   22 FIAAIDQGTTSSRCIVFDKDGRIVSVDQKEHEQIFPKPGWVEHDATEIWTNVQQVVAGAVEKAGITAKDVKAIGITNQRETTVLWDKNTGEPVHNAIVWQDTRTDALCKELGRNVGQDRFRRETGLPLASYFAGPKVRWLLDNVEGLRERAERGDILFGTMDSWVIWNLTGGVNGGHHVTDVTNASRTLLMNLHNLEWDEKILASM 227          
BLAST of mRNA_S-firma_M_contig9751.20744.1 vs. uniprot
Match: A0A345XKR3_9ACTN (Glycerol kinase n=2 Tax=Streptomyces TaxID=1883 RepID=A0A345XKR3_9ACTN)

HSP 1 Score: 268 bits (684), Expect = 2.860e-83
Identity = 126/206 (61.17%), Postives = 156/206 (75.73%), Query Frame = 1
Query:    1 YVASIDQGTSSSRCIVFGRDGSIVSEHQMEHEQFYPQPGRVEHDADEIWRNVEMCVKSALNAAGLDTSDLAAVGITNQRESTMVWDKNTGTPLHRLIVWNDVRTEPICRELKVNGGADRFRDRTGLPISPYFSATKLMWLLDNVPGLREVAENGDALFGTMDSWLMWKLTGGK---MHVTDVTNASRTNLMSLKGLHWDESILQEL 609
            ++A+IDQGT+SSRCIVF +DG IVS  Q EHEQ +P+PG VEHDA EIW NVE  V  AL+ AG+  SD+ A+GITNQRE+T++WD+NTG P+H  IVW D RT+ +CREL  N G DRFR  TGLP++ YF+  K+ WLLDNV GLRE AE G+ LFGTMDSW++W LTGG    +HVTDVTNASRT LM+L  + WD  I + +
Sbjct:   10 FIAAIDQGTTSSRCIVFDKDGRIVSVDQKEHEQIFPKPGWVEHDAAEIWTNVEQVVSGALDKAGIARSDVKALGITNQRETTLLWDRNTGQPVHNAIVWQDTRTDSLCRELGRNVGQDRFRRETGLPLASYFAGPKIRWLLDNVDGLRERAERGELLFGTMDSWVIWNLTGGTDGGVHVTDVTNASRTMLMNLHTMEWDAKICESM 215          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig9751.20744.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LEJ8_ECTSI2.120e-12588.18Glycerol kinase n=2 Tax=Ectocarpus TaxID=2879 RepI... [more]
UPI00056472011.390e-8461.35glycerol kinase GlpK n=1 Tax=Streptacidiphilus ory... [more]
A0A512BRW0_9HYPH1.810e-8461.69Glycerol kinase n=3 Tax=Microvirga TaxID=186650 Re... [more]
A0A1H7UFH3_STRJI2.700e-8462.14Glycerol kinase n=22 Tax=Streptomycetaceae TaxID=2... [more]
A0A1A9QRV0_STRA93.710e-8461.17Glycerol kinase n=20 Tax=Streptomyces TaxID=1883 R... [more]
A0A2D4CCV4_PYTIN5.370e-8464.59Glycerol kinase n=1 Tax=Pythium insidiosum TaxID=1... [more]
A0A0C2HRG7_9DELT6.640e-8460.39Glycerol kinase n=2 Tax=Geoalkalibacter ferrihydri... [more]
A0A7C4VTB7_9CHLR1.870e-8360.89Glycerol kinase n=1 Tax=Anaerolineae bacterium Tax... [more]
A0A0N0XTQ7_9ACTN2.020e-8361.65Glycerol kinase n=84 Tax=Streptomyces TaxID=1883 R... [more]
A0A345XKR3_9ACTN2.860e-8361.17Glycerol kinase n=2 Tax=Streptomyces TaxID=1883 Re... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig9751contigS-firma_M_contig9751:1371..3831 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-19
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score326.6
Seed ortholog evalue7e-87
Seed eggNOG ortholog2880.D8LEJ8
KEGG rclassRC00002,RC00017
KEGG koko:K00864
KEGG ReactionR00847
KEGG Pathwayko00561,ko01100,ko03320,ko04626,map00561,map01100,map03320,map04626
GOsGO:0003674,GO:0003824,GO:0004370,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005829,GO:0005975,GO:0006066,GO:0006071,GO:0006072,GO:0006629,GO:0006638,GO:0006639,GO:0006641,GO:0006793,GO:0006796,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008270,GO:0009056,GO:0009058,GO:0009987,GO:0016052,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019400,GO:0019405,GO:0019563,GO:0019637,GO:0019751,GO:0033554,GO:0042802,GO:0043167,GO:0043169,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044248,GO:0044255,GO:0044262,GO:0044275,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046164,GO:0046167,GO:0046174,GO:0046486,GO:0046872,GO:0046914,GO:0050896,GO:0051716,GO:0052646,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901575,GO:1901576,GO:1901615,GO:1901616
EggNOG free text desc.glycerol kinase activity
EggNOG OGsCOG0554@1,KOG2517@2759
Ec32 ortholog descriptionglycerol kinase
Ec32 orthologEc-21_004370.1
EC2.7.1.30
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko04147
Hectar predicted targeting categoryother localisation
Exons4
Model size846
Cds size531
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig9751.20744.1prot_S-firma_M_contig9751.20744.1Sphaerotrichia firma Sfir_13m malepolypeptideS-firma_M_contig9751 1455..3600 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622828812.8720732-UTR-S-firma_M_contig9751:1370..14541622828812.8720732-UTR-S-firma_M_contig9751:1370..1454Sphaerotrichia firma Sfir_13m maleUTRS-firma_M_contig9751 1371..1454 +
1697105177.9274387-UTR-S-firma_M_contig9751:1370..14541697105177.9274387-UTR-S-firma_M_contig9751:1370..1454Sphaerotrichia firma Sfir_13m maleUTRS-firma_M_contig9751 1371..1454 +
1622828812.952649-UTR-S-firma_M_contig9751:3600..38311622828812.952649-UTR-S-firma_M_contig9751:3600..3831Sphaerotrichia firma Sfir_13m maleUTRS-firma_M_contig9751 3601..3831 +
1697105177.98307-UTR-S-firma_M_contig9751:3600..38311697105177.98307-UTR-S-firma_M_contig9751:3600..3831Sphaerotrichia firma Sfir_13m maleUTRS-firma_M_contig9751 3601..3831 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622828812.886426-CDS-S-firma_M_contig9751:1454..15171622828812.886426-CDS-S-firma_M_contig9751:1454..1517Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig9751 1455..1517 +
1697105177.9409704-CDS-S-firma_M_contig9751:1454..15171697105177.9409704-CDS-S-firma_M_contig9751:1454..1517Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig9751 1455..1517 +
1622828812.9022253-CDS-S-firma_M_contig9751:2105..22841622828812.9022253-CDS-S-firma_M_contig9751:2105..2284Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig9751 2106..2284 +
1697105177.9515054-CDS-S-firma_M_contig9751:2105..22841697105177.9515054-CDS-S-firma_M_contig9751:2105..2284Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig9751 2106..2284 +
1622828812.917838-CDS-S-firma_M_contig9751:2710..28421622828812.917838-CDS-S-firma_M_contig9751:2710..2842Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig9751 2711..2842 +
1697105177.9618945-CDS-S-firma_M_contig9751:2710..28421697105177.9618945-CDS-S-firma_M_contig9751:2710..2842Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig9751 2711..2842 +
1622828812.9351075-CDS-S-firma_M_contig9751:3443..36001622828812.9351075-CDS-S-firma_M_contig9751:3443..3600Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig9751 3444..3600 +
1697105177.9721568-CDS-S-firma_M_contig9751:3443..36001697105177.9721568-CDS-S-firma_M_contig9751:3443..3600Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig9751 3444..3600 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-firma_M_contig9751.20744.1

>prot_S-firma_M_contig9751.20744.1 ID=prot_S-firma_M_contig9751.20744.1|Name=mRNA_S-firma_M_contig9751.20744.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=177bp
MEHEQFYPQPGRVEHDADEIWRNVEMCVKSALNAAGLDTSDLAAVGITNQ
RESTMVWDKNTGTPLHRLIVWNDVRTEPICRELKVNGGADRFRDRTGLPI
SPYFSATKLMWLLDNVPGLREVAENGDALFGTMDSWLMWKLTGGKMHVTD
VTNASRTNLMSLKGLHWDESILQELR*
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mRNA from alignment at S-firma_M_contig9751:1371..3831+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-firma_M_contig9751.20744.1 ID=mRNA_S-firma_M_contig9751.20744.1|Name=mRNA_S-firma_M_contig9751.20744.1|organism=Sphaerotrichia firma Sfir_13m male|type=mRNA|length=2461bp|location=Sequence derived from alignment at S-firma_M_contig9751:1371..3831+ (Sphaerotrichia firma Sfir_13m male)
TACGTTGCGAGCATCGACCAGGGCACCAGCAGCTCCCGTTGCATCGTCTT TGGCCGGGACGGAAGCATCGTTTCAGAGCACCAGATGGAGCACGAGCAGT TCTATCCTCAGCCGGGACGCGTTGAGCACGATGCGGACGAAATATGGGTA GGAAACCCCACAGCGGGGGTTGTTCTGAAACATGTGTGTGTGCTCTCTGC GAGGGGTATACTTCAACATCTCTTGCCGGTGGTTCAAGTCCAACAGCATA CTTGGGGTGATGAGTACAGCGGATCAATTTGGCTGTTTTGGTTTCCTTGG TCTTGTTTGCGAATATCGGTTGTCCGTCGGTATTTGGTGAAAAAAATGCT GTTGGTTCTCTACCATGTGGACACACAGCAAAGAGCCACGCCTGCGTTTT GTACGTGTAGGTGCAACACAAAACCCACCGCATGTCCAAGCAAACTCTGC CGACGTCTTGGACCCACGGGGTTATACATTCGCTACCCAGAGTTGTGCTT TCTTTGCGCTTGAGATCACGCACTACGTAGCGGGGCTGCCCGGAAGGTCC CGGTATAGTGTGCAGCGTCGTCAGTGCTGCTGTAGACCAGCAGATCAGTT GCGGTACTTTGGCCGACCCTGGCTAGCGCGCGACAGGTGGGTGTTGCGTC TGTTGCACACTTTTCGCTCCCTTGTTCACGCTCTTCCTTTTTCCCTCTCC TTCCCCTTGATTCAACGCTGACACCTCTTCAACAGCGCAACGTGGAGATG TGCGTCAAGTCCGCGCTGAATGCCGCCGGCCTCGACACCTCCGACCTGGC CGCCGTGGGCATCACCAACCAGAGGGAGAGCACGATGGTCTGGGACAAAA ACACGGGAACACCCCTCCATCGACTCATTGTCTGGAACGACGTCCGCACC GAGCCCATCTGCAGGTGCTCATTGAGGAGCGGTCAGTTGCTTGTGTTGCT GTGGGGGGTTTGTTGCTGTTGTGTTGTTTGTCATGTTTGGTGTTGAACCC TCTAACTCGACTCGTTCGTCTGGCTGTCCACCCCAGTACCTCCATGTTGA ATCACCCTCCAAGCGTATCTGCAAGTACATTGAAATCTCTCCGTTTTGCG CAGTTTCTTCCATATTCAGACAGCAAGGTGGTGTTTAGGAAAGGTTTTTG GAAACTCTAGTACGGCAAAGGCAGTGACCAAATCCATAGCCTACCTTGAA CCCATGATTTTGGAAGATAAAGCTGCTGCCGAAACATTTTCTAAAAAATC ACTGGCGTGTACCGTGATCCCCCTCCCTATATCAATTTCGCCGTATGTTA TTACGACCCTGAACGCTGCCCCGCTCTTTCTATATTCAAGAGAGCTCAAG GTCAACGGTGGAGCGGACCGCTTTCGAGACAGGACCGGGTTGCCCATCTC CCCCTACTTTTCGGCGACCAAGCTCATGTGGCTCCTCGACAACGTGCCAG GCCTTCGCGAAGTGGCAGAAAAGTGAGGGGGGGTTGCCTGAGCTGTTTCT GTCGAGTGCTTGCTTTGCCTAACAGCCCTTGCCTTGACGCTTGTGTCCCA TTTGATGCAGAGTTTGAGTTGTGCCGGCGGACACCGACCCTTTCGCTCTG CATGAGAAAAGACGAAGCGGTTGTGGTTTGTACGCTACCGCCATCTTGTT TGCTCTCTGAGTTCTGGTTGGGGTGTGGTCGGAAAGTGTAGCCCACTTTT TGATTGGCTCTACTCTCGTTGTGCCCAACGAGCTCAACGTTCTGGGACGC TTCAGTTCCTGCATCTCGTCTCCAACCCTATGCCTTCACTCTCGGGTTGT TGGGTTTGTTTGGAGCGAGGGGGGGGGGTGTTTCCTGGACATTTTCCCCA GCAGTTTGCGGGTGCGGAGACTGCGCATGTTTCGTTGCCTGTGACCTGAT CACCATACATAGCACGCTGAAATCCTGATGGTGGGCATGTGTGCGCATTT TTTATCAACCCTCAGCGCTGTACAGCGAGGACTCGGTTCGGATTACTTGA GTGATTGACTTACAACCGGAAACCTCGCTCCCTCTATCTCTCTCTCTCTC GGTCCAAACCAATCGACTGCCAGTGGTGACGCTTTGTTCGGGACGATGGA CTCCTGGTTAATGTGGAAGCTCACGGGCGGAAAGATGCACGTCACGGACG TTACCAACGCCAGCCGGACAAACCTCATGTCCCTGAAGGGGTTGCACTGG GATGAATCGATCTTGCAGGAGCTGAGGTAAGGGAATAGGCACGCCCACGA AGATGCGTACCGGTTTCACCAGCATATCGTCTCCTCAAGTTCGGGAAGTG CTTACTCGATTGAATTTGCATTGATTAAAGATACAGTAGCTGTCGCTACA ACGAGCGACAGCTGATAGATGTAACTATCGTCAGAGGTGTGCGTCCACGT TCGGGAATAGAGTGCAAGCACCACACACGTGATGCCCTCTGTTTACACAG CAGCTGTGCGC
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Coding sequence (CDS) from alignment at S-firma_M_contig9751:1371..3831+

>mRNA_S-firma_M_contig9751.20744.1 ID=mRNA_S-firma_M_contig9751.20744.1|Name=mRNA_S-firma_M_contig9751.20744.1|organism=Sphaerotrichia firma Sfir_13m male|type=CDS|length=1062bp|location=Sequence derived from alignment at S-firma_M_contig9751:1371..3831+ (Sphaerotrichia firma Sfir_13m male)
ATGGAGCACGAGCAGTTCTATCCTCAGCCGGGACGCGTTGAGCACGATGC
GGACGAAATATGGATGGAGCACGAGCAGTTCTATCCTCAGCCGGGACGCG
TTGAGCACGATGCGGACGAAATATGGCGCAACGTGGAGATGTGCGTCAAG
TCCGCGCTGAATGCCGCCGGCCTCGACACCTCCGACCTGGCCGCCGTGGG
CATCACCAACCAGAGGGAGAGCACGATGGTCTGGGACAAAAACACGGGAA
CACCCCTCCATCGACTCATTGTCTGGAACGACGTCCGCACCGAGCCCATC
TGCAGCGCAACGTGGAGATGTGCGTCAAGTCCGCGCTGAATGCCGCCGGC
CTCGACACCTCCGACCTGGCCGCCGTGGGCATCACCAACCAGAGGGAGAG
CACGATGGTCTGGGACAAAAACACGGGAACACCCCTCCATCGACTCATTG
TCTGGAACGACGTCCGCACCGAGCCCATCTGCAGAGAGCTCAAGGTCAAC
GGTGGAGCGGACCGCTTTCGAGACAGGACCGGGTTGCCCATCTCCCCCTA
CTTTTCGGCGACCAAGCTCATGTGGCTCCTCGACAACGTGCCAGGCCTTC
GCGAAGTGGCAGAAAAAGAGCTCAAGGTCAACGGTGGAGCGGACCGCTTT
CGAGACAGGACCGGGTTGCCCATCTCCCCCTACTTTTCGGCGACCAAGCT
CATGTGGCTCCTCGACAACGTGCCAGGCCTTCGCGAAGTGGCAGAAAATG
GTGACGCTTTGTTCGGGACGATGGACTCCTGGTTAATGTGGAAGCTCACG
GGCGGAAAGATGCACGTCACGGACGTTACCAACGCCAGCCGGACAAACCT
CATGTCCCTGAAGGGGTTGCACTGGGATGAATCGATCTTGCAGGAGCTGA
GGTAATGGTGACGCTTTGTTCGGGACGATGGACTCCTGGTTAATGTGGAA
GCTCACGGGCGGAAAGATGCACGTCACGGACGTTACCAACGCCAGCCGGA
CAAACCTCATGTCCCTGAAGGGGTTGCACTGGGATGAATCGATCTTGCAG
GAGCTGAGGTAA
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