mRNA_S-firma_M_contig9716.20711.1 (mRNA) Sphaerotrichia firma Sfir_13m male
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Overview
Homology
BLAST of mRNA_S-firma_M_contig9716.20711.1 vs. uniprot
Match: D8LLS6_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLS6_ECTSI) HSP 1 Score: 186 bits (471), Expect = 1.210e-47 Identity = 228/532 (42.86%), Postives = 259/532 (48.68%), Query Frame = 1
Query: 1 QVSRIILGIGEAFNAPACYALITLYFPHARRATANGIYSTGTYLGAALSSLSLALAQLLGWRNTAFLAGAFGVLMGAVLFFTVDHNPVMPPTAQGYTRLADDPPPSMPPLPLPS-------SGEASSKL----PAAA---VGH-KAVSFAGVGNGVAGSAVAVAADGECTSYGGVASAADGGSSGGVXXXXXXNSRSVSLQSMLPLAAGLKTTGSPSAXXXXXXXXXXXXXXXXXXXXXXXAPGGALGSGXXXGDTAATGEMLVPIAPPAGKGASPSSPRFLVGDESRLEHGGDGDGWRKXXXXXXXXXXXXXGENPFE---NPFAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDHRRRHLAGRSGEPAGEELRTYPVAAAAAAGADTGGGVDLVAPYSSAL-------------------------------QAAGATPNGSGWGWYDADPAGGEEAPPGAGRLGTQGVGGXXXXXXXXXXLRKNDLGLALRMIVSNRVVLVLFAASSARMIATWATAGYMAV 1449
VS+I+LG+GEAFNAPACYA+ITLYFPH++RATANGIYSTGTYLG+A+SSL LALA LLGWRNTAFLAGAFGVL GAVLFFTV+HNPVMPP+ GYT+L D S E +KL P+AA VGH K VSFA G+ A A G C GG AD S G Q + AG + S XXXXXXXXXXXXXXXXXXXXXXX+ GG +GS GD A AP A A P+ RFL E ++ G G G NPF NPFA RR ++ P+AA A +D APYS+AL P G W D + +G +G XXXXXXXXXXL K+DLG ALRMIVSNRVVLVLFAASSARMI TWA+AGYMAV
Sbjct: 93 MVSQIVLGMGEAFNAPACYAMITLYFPHSKRATANGIYSTGTYLGSAMSSLCLALAVLLGWRNTAFLAGAFGVLAGAVLFFTVEHNPVMPPSNDGYTKLPDXXXXXXXXXXXXXXXXXXXXSHEKCTKLEPLPPSAAMAGVGHRKVVSFADSNGNGGGAGGARALYGGCV--GGETRTADPAVSNGDDR-----------QELAAAEAGRRE----SXXXXXXXXXXXXXXXXXXXXXXXXSRGGTVGSSGSGGDIAPARWA----APGAXXXAPPA--RFLAPLEPPIQAAGGG---------RRTTRADVSGRNPFAKSGNPFAVSPSAAEGQGRGCGAGRWVDDDGAAGCEEDRGTRGGRGRRXXXXXXXXXXXXDQ----PIAAGGAGASD--------APYSAALVXXXXXXXXXXXXXXXXXYDEXXXXXXXXXXXXXXXXPAGGAGRWKDVEDSGPR-----------RGXXXXXXXXXXXXXLGKHDLGEALRMIVSNRVVLVLFAASSARMIGTWASAGYMAV 569
BLAST of mRNA_S-firma_M_contig9716.20711.1 vs. uniprot
Match: A0A6H5KX10_9PHAE (MFS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KX10_9PHAE) HSP 1 Score: 169 bits (429), Expect = 8.210e-42 Identity = 224/553 (40.51%), Postives = 254/553 (45.93%), Query Frame = 1
Query: 1 QVSRIILGIGEAFNAPACYALITLYFPHARRATANGIYSTGTYLGAALSSLSLALAQLLGWRNTAFLAGAFGVLMGAVLFFTVDHNPVMPPTAQGYTRLADDPPPSMPPLPLPS--------SGEASSKL----PAAA---VGH-KAVSFAGVGNGVAGSAVAVAADGECTSYGGVASAADGGSSGGVXXXXXXNSRSVSLQSMLPLAAG--------------LKTTGSPSAXXXXXXXXXXXXXXXXXXXXXXXAPGGALGSGXXXGDTAATGEMLVPIAPPAGKGASPSSPRFLVGDESRLEHGGDGDGWRKXXXXXXXXXXXXXGENPFE---NPFAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDHRRRHLAGRSGEPAGEELRTYPVAAAAAAGADTGGGVDLVAPYSSALQAAGATP----NGSGWGWYD-------------ADPAGGEEAPPGAGR--------------------LGTQGVGGXXXXXXXXXXLRKNDLGLALRMIVSNRVVLVLFAASSARMIATWATAGYMAV 1449
VS+I+LG+G+AFNAPACYA+ITLYFPH++RATANGIYS+GTYLG+A+SSL LALA LLGWRNTAFLAGA GVL AVLFFTV+HNPVMPP+ GYT+L D S E +KL P+AA VGH K VSFA + +GG +GG XX + S ++ G XXXXXXXXXXXXXXXXXXXXXXX A+GS GD A P PP A+ R D S G NPF NPFA R + +GR R P+AA A +D APYS+AL NG GWGWYD A PAGG AGR G XXXXXXXXXXL K+DLG ALRMIVSNRVVLVLFAASS RMI TWA+AGYMAV
Sbjct: 71 MVSQIVLGMGQAFNAPACYAMITLYFPHSKRATANGIYSSGTYLGSAISSLCLALAVLLGWRNTAFLAGASGVLAAAVLFFTVEHNPVMPPSEDGYTKLPDXXXXXXXXXXXXXXXXXXXXXSHEKCTKLEPLPPSAAMSGVGHRKVVSFAESND-------------------------NGGCAGGARPPYXXXXXXETRASDPAVSNGDDRQDLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVGSSGSGGDIAPA-RWTAPGEPPIQ--AASGGKRTTRADVS--------------------------GRNPFAKSGNPFAVSPSAADGQGRGGGAGRWVDGDGAAGCEEDRGARGG-RGRENRSGRGXXXXXXADRDQPIAAGGAGASD--------APYSAALVXXXXXXKDLNNGKGWGWYDEEDHAXXXXXGXAATPAGG------AGRWKDVADSXXXXXXXXXXXXXXXXGGXXXXXXXXXXXXXLGKHDLGQALRMIVSNRVVLVLFAASSVRMIGTWASAGYMAV 554
BLAST of mRNA_S-firma_M_contig9716.20711.1 vs. uniprot
Match: A0A835Z7U8_9STRA (Major facilitator superfamily domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7U8_9STRA) HSP 1 Score: 104 bits (260), Expect = 2.700e-20 Identity = 50/85 (58.82%), Postives = 65/85 (76.47%), Query Frame = 1
Query: 7 SRIILGIGEAFNAPACYALITLYFPHARRATANGIYSTGTYLGAALSSLSLALAQLLGWRNTAFLAGAFGVLMGAVLFFTVDHNP 261
SR+ + +GEAFNAPACY+L+ YFP A+R+TANGIYSTGTYLGA LSSL + A +GWR T+F AG G+ M ++L+ TV+ P
Sbjct: 181 SRVAVAVGEAFNAPACYSLLDWYFP-AKRSTANGIYSTGTYLGAGLSSLCILAASAIGWRRTSFAAGCAGLFMASLLYNTVEQPP 264
BLAST of mRNA_S-firma_M_contig9716.20711.1 vs. uniprot
Match: A0A7S3XX01_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XX01_HETAK) HSP 1 Score: 104 bits (259), Expect = 4.080e-20 Identity = 53/104 (50.96%), Postives = 67/104 (64.42%), Query Frame = 1
Query: 4 VSRIILGIGEAFNAPACYALITLYFPHARRATANGIYSTGTYLGAALSSLSLALAQLLGWRNTAFLAGAFGVLMGAVLFFTVDHNPVMPPTAQGYTRLADDPPP 315
++R+++G +AFNAP CY + YF RRATANG+YS G +LGAAL SLS+ALA +GWR+T LAG GVL+ AV+F T P P G A PPP
Sbjct: 156 LARLVVGAAQAFNAPCCYIFVAQYFEERRRATANGVYSAGNFLGAALGSLSIALASAVGWRDTCALAGTVGVLVAAVVFLTARDRPAGPARPPG----APPPPP 255
BLAST of mRNA_S-firma_M_contig9716.20711.1 vs. uniprot
Match: A0A6H5KMV9_9PHAE (MFS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMV9_9PHAE) HSP 1 Score: 89.4 bits (220), Expect = 3.340e-17 Identity = 48/103 (46.60%), Postives = 67/103 (65.05%), Query Frame = 1
Query: 4 VSRIILGIGEAFNAPACYALITLYFPHARRATANGIYSTGTYLGAALSSLSLALAQLLGWRNTAFLAGAFGVLMGAVLFFTVDHNPVMPP--TAQGYTRLADD 306
+SRI+LGIGE+F+ PA Y+LI YFP A ANG+++ G Y+G LSSLS+A+AQ +GWR +AF +G+L+ ++ FTV PV P TA L +
Sbjct: 39 LSRILLGIGESFSMPASYSLIADYFPAESLAQANGVFAFGVYVGGGLSSLSIAMAQGIGWRASAFTVAGYGLLLSLLVRFTV-REPVRTPAVTAPAPANLTSE 140
BLAST of mRNA_S-firma_M_contig9716.20711.1 vs. uniprot
Match: A0A7S2Y1D3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y1D3_9STRA) HSP 1 Score: 94.0 bits (232), Expect = 5.360e-17 Identity = 44/84 (52.38%), Postives = 60/84 (71.43%), Query Frame = 1
Query: 4 VSRIILGIGEAFNAPACYALITLYFPHARRATANGIYSTGTYLGAALSSLSLALAQLLGWRNTAFLAGAFGVLMGAVLFFTVDH 255
+SR+ILG+GE+F++PA Y+LI YFP R ATANGI++ G YLG LSSLS+ +A+ +GWR+T FL G ++ AV TV
Sbjct: 121 LSRVILGVGESFSSPASYSLIADYFPKERLATANGIFAWGVYLGGGLSSLSITMAESIGWRSTTFLVAMVGFVLAAVFVLTVQE 204
BLAST of mRNA_S-firma_M_contig9716.20711.1 vs. uniprot
Match: A0A7S3NPU8_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NPU8_9STRA) HSP 1 Score: 93.6 bits (231), Expect = 1.460e-16 Identity = 47/88 (53.41%), Postives = 58/88 (65.91%), Query Frame = 1
Query: 4 VSRIILGIGEAFNAPACYALITLYFPHA--RRATANGIYSTGTYLGAALSSLSLALAQLLGWRNTAFLAGAFGVLMGAVLFFTVDHNP 261
+SRIILGI + FNAP Y +I +F H RA ANG+YS GTYLG+ALSSLSL L + GWR A +A FGV A+++ VD P
Sbjct: 161 ISRIILGIAQGFNAPCAYPVIAYFFSHNGDHRALANGVYSIGTYLGSALSSLSLVLTMIFGWRTIATIAAIFGVFCAALIYLFVDRPP 248
BLAST of mRNA_S-firma_M_contig9716.20711.1 vs. uniprot
Match: D7G1B5_ECTSI (MFS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1B5_ECTSI) HSP 1 Score: 88.6 bits (218), Expect = 4.120e-15 Identity = 42/82 (51.22%), Postives = 60/82 (73.17%), Query Frame = 1
Query: 4 VSRIILGIGEAFNAPACYALITLYFPHARRATANGIYSTGTYLGAALSSLSLALAQLLGWRNTAFLAGAFGVLMGAVLFFTV 249
+SRI+LGIGE+F+ PA Y+LI YFP A ANG+++ G Y+G LSSLS+A+AQ +GWR +AF +G+L+ ++ FTV
Sbjct: 123 LSRILLGIGESFSMPASYSLIADYFPAESLAQANGVFAFGVYVGGGLSSLSIAMAQGIGWRGSAFTVAGYGLLLSLLVRFTV 204
BLAST of mRNA_S-firma_M_contig9716.20711.1 vs. uniprot
Match: F0YAA8_AURAN (MFS domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YAA8_AURAN) HSP 1 Score: 87.4 bits (215), Expect = 1.730e-14 Identity = 42/84 (50.00%), Postives = 55/84 (65.48%), Query Frame = 1
Query: 10 RIILGIGEAFNAPACYALITLYFPHARRATANGIYSTGTYLGAALSSLSLALAQLLGWRNTAFLAGAFGVLMGAVLFFTVDHNP 261
R+I+G+ + FNAP Y +I +F A RATANG+YS GTY G+ALS+LSL A +GWR T A G+ A+L+ TVD P
Sbjct: 162 RLIMGVAQGFNAPCSYPVIAYHFSMAERATANGMYSMGTYFGSALSTLSLIFAMWVGWRMTTTAAVVVGIFAAALLYLTVDRPP 245
BLAST of mRNA_S-firma_M_contig9716.20711.1 vs. uniprot
Match: A0A7S2V0W5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V0W5_9STRA) HSP 1 Score: 75.1 bits (183), Expect = 7.170e-12 Identity = 36/55 (65.45%), Postives = 44/55 (80.00%), Query Frame = 1
Query: 4 VSRIILGIGEAFNAPACYALITLYFPHARRATANGIYSTGTYLGAALSSLSLALA 168
VSRI++G+G+AFNAP Y I FP +R+TANG+YSTGTYLGA LSSLSL +A
Sbjct: 153 VSRILVGVGQAFNAPCAYMTIAALFPVEKRSTANGLYSTGTYLGAGLSSLSLMMA 207 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig9716.20711.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_M_contig9716.20711.1 >prot_S-firma_M_contig9716.20711.1 ID=prot_S-firma_M_contig9716.20711.1|Name=mRNA_S-firma_M_contig9716.20711.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=483bp QVSRIILGIGEAFNAPACYALITLYFPHARRATANGIYSTGTYLGAALSSback to top mRNA from alignment at S-firma_M_contig9716:368..2508- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_M_contig9716.20711.1 ID=mRNA_S-firma_M_contig9716.20711.1|Name=mRNA_S-firma_M_contig9716.20711.1|organism=Sphaerotrichia firma Sfir_13m male|type=mRNA|length=2141bp|location=Sequence derived from alignment at S-firma_M_contig9716:368..2508- (Sphaerotrichia firma Sfir_13m male)back to top Coding sequence (CDS) from alignment at S-firma_M_contig9716:368..2508- >mRNA_S-firma_M_contig9716.20711.1 ID=mRNA_S-firma_M_contig9716.20711.1|Name=mRNA_S-firma_M_contig9716.20711.1|organism=Sphaerotrichia firma Sfir_13m male|type=CDS|length=2898bp|location=Sequence derived from alignment at S-firma_M_contig9716:368..2508- (Sphaerotrichia firma Sfir_13m male)back to top |