mRNA_S-firma_M_contig9673.20663.1 (mRNA) Sphaerotrichia firma Sfir_13m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-firma_M_contig9673.20663.1
Unique NamemRNA_S-firma_M_contig9673.20663.1
TypemRNA
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Homology
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BLAST of mRNA_S-firma_M_contig9673.20663.1 vs. uniprot
Match: D8LQF2_ECTSI (GTR1, Ras superfamily GTPase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQF2_ECTSI)

HSP 1 Score: 454 bits (1167), Expect = 2.000e-158
Identity = 226/250 (90.40%), Postives = 240/250 (96.00%), Query Frame = 3 
Query:  198 MGKKKVLLMGKSRSGKTSMRSIIFANYGAKDTIRLGPTLDVENSHVRFLGDMEMNLWDCGGQDAFYDTYFNHQQDFIFRSVEVLIYVFDVESNDVSGDLERYRGVLEAVDRNSPDARVFVLIHKMDLVSEENRETVFMNRKQVISDISGGVDLTFFMTSIWDETLYKAWSSIVYSLIPNMEVLESHLQNFCDICGADEVVLFERETFLVIADATEVPHSDVHRFEKISNIVKQFKLSVSKTSLKFEGMMV 947
            MGKKKVLLMGKSRSGKTSMRSIIFANYGAKDTIRLGPTLDVE+SHVRFLGDM +NLWDCGGQD+FY+TYFN+QQ+FIFRSVEVLIYVFDV S+DV+GDLERYRGVLEAVDRNS DARVFVLIHKMDLV+EE+RE VF+NRKQVISD+SGGV+LTFFMTSIWDETLY+AWSSIVYSLIPNMEVLESHL NFCDICGADEVVLFERETFLVIA A  V H DVHRFEKISNIVKQFKLSVSKTSLKFEGMMV
Sbjct:    1 MGKKKVLLMGKSRSGKTSMRSIIFANYGAKDTIRLGPTLDVEHSHVRFLGDMVLNLWDCGGQDSFYETYFNYQQEFIFRSVEVLIYVFDVMSDDVAGDLERYRGVLEAVDRNSSDARVFVLIHKMDLVTEEDREVVFLNRKQVISDVSGGVELTFFMTSIWDETLYRAWSSIVYSLIPNMEVLESHLDNFCDICGADEVVLFERETFLVIAHAKHVQHPDVHRFEKISNIVKQFKLSVSKTSLKFEGMMV 250
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BLAST of mRNA_S-firma_M_contig9673.20663.1 vs. uniprot
Match: A0A835Z771_9STRA (Putative ras-related GTP binding protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z771_9STRA)

HSP 1 Score: 372 bits (956), Expect = 1.330e-126
Identity = 184/250 (73.60%), Postives = 213/250 (85.20%), Query Frame = 3 
Query:  198 MGKKKVLLMGKSRSGKTSMRSIIFANYGAKDTIRLGPTLDVENSHVRFLGDMEMNLWDCGGQDAFYDTYFNHQQDFIFRSVEVLIYVFDVESNDVSGDLERYRGVLEAVDRNSPDARVFVLIHKMDLVSEENRETVFMNRKQVISDISGGVDLTFFMTSIWDETLYKAWSSIVYSLIPNMEVLESHLQNFCDICGADEVVLFERETFLVIADATEVPHSDVHRFEKISNIVKQFKLSVSKTSLKFEGMMV 947
            M KKKVLLMGKS SGKTSMRSIIFANY A+DT+RL PTLDVE+SHVRFLG++ +NLWDCGGQDAFY++YF+ Q+D IFR VEVLIYVFD+ESN++  DL  + GVLEA+++NSPDARVFVLIHKMDLV+EE+RE VF  R+Q++ D S G+   FF TSIWDETLYKAWSSIVYSLIPN+ VLESHL NFC IC ADEVVLFER TFLVI+ A +  H D HRFEKISNI+KQFKLSVSKT  +F+GM V
Sbjct:    1 MAKKKVLLMGKSGSGKTSMRSIIFANYLARDTMRLSPTLDVEHSHVRFLGNLVLNLWDCGGQDAFYESYFDSQRDLIFRGVEVLIYVFDIESNELEKDLNHFGGVLEAIEQNSPDARVFVLIHKMDLVAEEHREVVFQQRQQLVLDHSRGLAPIFFRTSIWDETLYKAWSSIVYSLIPNINVLESHLDNFCKICDADEVVLFERATFLVISHALQAQHYDAHRFEKISNIIKQFKLSVSKTQAQFQGMEV 250
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BLAST of mRNA_S-firma_M_contig9673.20663.1 vs. uniprot
Match: W7TTY0_9STRA (Ras-related gtp-binding protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TTY0_9STRA)

HSP 1 Score: 354 bits (908), Expect = 2.500e-119
Identity = 175/253 (69.17%), Postives = 209/253 (82.61%), Query Frame = 3 
Query:  198 MGKKKVLLMGKSRSGKTSMRSIIFANYGAKDTIRLGPTLDVENSHVRFLGDMEMNLWDCGGQDAFYDTYFNHQQDFIFRSVEVLIYVFDVESNDVSGDLERYRGVLEAVDRNSPDARVFVLIHKMDLVSEENRETVFMNRKQVISDISGG---VDLTFFMTSIWDETLYKAWSSIVYSLIPNMEVLESHLQNFCDICGADEVVLFERETFLVIADATEVPHSDVHRFEKISNIVKQFKLSVSKTSLKFEGMMV 947
            MGKKKVLLMGKS SGKTSMRS IFANY A+DT+RL PTLDVE+ HVRFLG++ +NLWDCGGQDAFY++YF+ Q+D IFRSVEVLIYVFDVES D   DL  + GVLEA+D+ SPDA++FVLIHKMDLV+EE+RE+VF++R+++I  ++       +TFF TSIWDETLYKAWS IVY L+PN++ LE  L + C+ICGADE+VLFER TFLVIA AT   HSDVHRFEKISNI+KQFKLS  KT  +F GM V
Sbjct:    1 MGKKKVLLMGKSGSGKTSMRSFIFANYMARDTMRLSPTLDVEHHHVRFLGNLVLNLWDCGGQDAFYESYFDSQRDLIFRSVEVLIYVFDVESADTEKDLSHFMGVLEAIDQYSPDAKLFVLIHKMDLVAEEDRESVFLDRQKMILGLATSRFNFTVTFFKTSIWDETLYKAWSGIVYQLVPNVKALEEQLNSLCEICGADEMVLFERATFLVIAHATHAAHSDVHRFEKISNIIKQFKLSCGKTQAQFHGMEV 253
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BLAST of mRNA_S-firma_M_contig9673.20663.1 vs. uniprot
Match: A0A7S2V5Y6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V5Y6_9STRA)

HSP 1 Score: 352 bits (903), Expect = 1.700e-118
Identity = 176/252 (69.84%), Postives = 209/252 (82.94%), Query Frame = 3 
Query:  198 MGKKKVLLMGKSRSGKTSMRSIIFANYGAKDTIRLGPTLDVENSHVRFLGDMEMNLWDCGGQDAFYDTYFNHQQDFIFRSVEVLIYVFDVESNDVSGDLERYRGVLEAVDRNSPDARVFVLIHKMDLVSEENRETVFMNRKQVISDISG--GVDLTFFMTSIWDETLYKAWSSIVYSLIPNMEVLESHLQNFCDICGADEVVLFERETFLVIADATEVPHSDVHRFEKISNIVKQFKLSVSKTSLKFEGMMV 947
            M KKKVLLMGKS SGKTSMRSIIFANY A+DT+RL PTLDVE+ HVRFLG++ +NLWDCGGQDAFY++YF+ Q+D IFR VEV+IYVFD+ES ++  DL  ++GVLEA+++NSPDAR+FVLIHKMDLV+EE R+ VF +RK ++   S   G  +TFF TSIWDETLYKAWSSIVYSLIPN+++LE HL+ FC IC ADEVVLFE  TFLVI+ AT   H DVHRFEKISNI+KQFKLS SKT  +F GM V
Sbjct:    1 MAKKKVLLMGKSGSGKTSMRSIIFANYLARDTMRLSPTLDVEHCHVRFLGNLVLNLWDCGGQDAFYESYFDSQRDLIFRGVEVVIYVFDIESAELDKDLHHFQGVLEAIEQNSPDARMFVLIHKMDLVAEEERDVVFEDRKALVLQHSRDMGSLMTFFRTSIWDETLYKAWSSIVYSLIPNIDILERHLKEFCKICDADEVVLFESATFLVISHATATDHYDVHRFEKISNIIKQFKLSCSKTLAQFRGMEV 252
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BLAST of mRNA_S-firma_M_contig9673.20663.1 vs. uniprot
Match: A0A067CTB0_SAPPC (Ras-like GTP-binding protein A n=12 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CTB0_SAPPC)

HSP 1 Score: 347 bits (890), Expect = 1.300e-116
Identity = 172/248 (69.35%), Postives = 202/248 (81.45%), Query Frame = 3 
Query:  204 KKKVLLMGKSRSGKTSMRSIIFANYGAKDTIRLGPTLDVENSHVRFLGDMEMNLWDCGGQDAFYDTYFNHQQDFIFRSVEVLIYVFDVESNDVSGDLERYRGVLEAVDRNSPDARVFVLIHKMDLVSEENRETVFMNRKQVISDISGGVDLTFFMTSIWDETLYKAWSSIVYSLIPNMEVLESHLQNFCDICGADEVVLFERETFLVIADATEVPHSDVHRFEKISNIVKQFKLSVSKTSLKFEGMMV 947
            KKKVLLMGKS SGKTSMRSIIFANY A+DT+RLGPTLDVE+SHVRFLG++ +NLWDCGGQDAFY+ YF  Q+D IFRSVE+LIYVFD+ES ++  D+  + G LEA+++NS  A+VFVLIHKMDLV E  R+ VF  RK++I   +G +    F TSIWDETLY+AWSSIVYSLIPNM+ LE HL  FC IC ADEVVLFER TFLVIA+AT   H D+HRFEKISNI+KQFKLS SKT  +F+GM V
Sbjct:    2 KKKVLLMGKSGSGKTSMRSIIFANYLARDTMRLGPTLDVEHSHVRFLGNLVLNLWDCGGQDAFYENYFESQRDHIFRSVELLIYVFDIESRELEKDMNHFDGCLEAIEQNSESAKVFVLIHKMDLVPEAQRDAVFEQRKEMILSRTGQIPTVCFGTSIWDETLYRAWSSIVYSLIPNMQDLEHHLNVFCSICNADEVVLFERATFLVIANATHTTHRDMHRFEKISNIIKQFKLSCSKTQAQFQGMEV 249
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BLAST of mRNA_S-firma_M_contig9673.20663.1 vs. uniprot
Match: A0A6V1W998_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1W998_HETAK)

HSP 1 Score: 345 bits (884), Expect = 1.220e-115
Identity = 172/252 (68.25%), Postives = 206/252 (81.75%), Query Frame = 3 
Query:  198 MGKKKVLLMGKSRSGKTSMRSIIFANYGAKDTIRLGPTLDVENSHVRFLGDMEMNLWDCGGQDAFYDTYFNHQQDFIFRSVEVLIYVFDVESNDVSGDLERYRGVLEAVDRNSPDARVFVLIHKMDLVSEENRETVFMNRKQVISDISGGVD--LTFFMTSIWDETLYKAWSSIVYSLIPNMEVLESHLQNFCDICGADEVVLFERETFLVIADATEVPHSDVHRFEKISNIVKQFKLSVSKTSLKFEGMMV 947
            M KKKV+LMGKS SGKTSMRSIIFANY A+DT+RL PTLDVE+S VRFLG + +NLWDCGGQDAFY++YF+ Q+D IFR VEVLIYVFD+ES ++  D   Y GVLEA+++NSPDA+VF+L+HKMDLV+EE R+ VF  R+++I+  SG     LT F TSIWDETLYKAWSSIVYSLIPN+ +LE HL++FC++CGADEVVLFE  TFLVI+ AT   H D HRFEK+SNI+KQFKLS SKT   F GM V
Sbjct:    1 MTKKKVILMGKSGSGKTSMRSIIFANYLARDTMRLSPTLDVEHSDVRFLGGLVLNLWDCGGQDAFYESYFDSQRDLIFRGVEVLIYVFDIESAELEKDFAHYEGVLEAMEQNSPDAKVFILVHKMDLVAEEERDAVFDGRRRLIAGRSGDFAPRLTCFATSIWDETLYKAWSSIVYSLIPNVALLERHLRDFCEVCGADEVVLFESATFLVISHATTQEHYDPHRFEKVSNIIKQFKLSCSKTHASFRGMEV 252
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BLAST of mRNA_S-firma_M_contig9673.20663.1 vs. uniprot
Match: F0VZ80_9STRA (Rasrelated GTPbinding protein putative n=14 Tax=Oomycota TaxID=4762 RepID=F0VZ80_9STRA)

HSP 1 Score: 343 bits (880), Expect = 4.300e-115
Identity = 168/248 (67.74%), Postives = 201/248 (81.05%), Query Frame = 3 
Query:  204 KKKVLLMGKSRSGKTSMRSIIFANYGAKDTIRLGPTLDVENSHVRFLGDMEMNLWDCGGQDAFYDTYFNHQQDFIFRSVEVLIYVFDVESNDVSGDLERYRGVLEAVDRNSPDARVFVLIHKMDLVSEENRETVFMNRKQVISDISGGVDLTFFMTSIWDETLYKAWSSIVYSLIPNMEVLESHLQNFCDICGADEVVLFERETFLVIADATEVPHSDVHRFEKISNIVKQFKLSVSKTSLKFEGMMV 947
            KKKVLLMGKS SGKTSMRSIIFANY A+DT+RLGPTLDVE+SHVRFLG++ +NLWDCGGQDAFY+ YF  Q+D IFRSVE+LIYVFD+ES ++  D+  + G LEA+D+NS +A+VFVLIHKMDLV EE R+ +   +K++I   +G +    F TSIWDETLY+AWSSIVYSLIPN++ LE HL  FC IC ADEVVLFER TFLVI+ A    H D+HRFEKISNI+KQFKLS SKT  +F+GM V
Sbjct:    2 KKKVLLMGKSGSGKTSMRSIIFANYLARDTMRLGPTLDVEHSHVRFLGNLVLNLWDCGGQDAFYENYFESQRDHIFRSVELLIYVFDIESREIDKDMAHFEGCLEAIDQNSSNAKVFVLIHKMDLVPEEKRQRILEQKKEMILTRTGSLPTICFGTSIWDETLYRAWSSIVYSLIPNIQDLEKHLDGFCTICDADEVVLFERATFLVISHAAHANHRDIHRFEKISNIIKQFKLSCSKTQAQFQGMEV 249
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BLAST of mRNA_S-firma_M_contig9673.20663.1 vs. uniprot
Match: F0YHE9_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YHE9_AURAN)

HSP 1 Score: 333 bits (854), Expect = 4.640e-111
Identity = 162/254 (63.78%), Postives = 203/254 (79.92%), Query Frame = 3 
Query:  189 SAAMGKKKVLLMGKSRSGKTSMRSIIFANYGAKDTIRLGPTLDVENSHVRFLGDMEMNLWDCGGQDAFYDTYFNHQQDFIFRSVEVLIYVFDVESNDVSGDLERYRGVLEAVDRNSPDARVFVLIHKMDLVSEENRETVFMNRK-QVISDISGGVDLTFFMTSIWDETLYKAWSSIVYSLIPNMEVLESHLQNFCDICGADEVVLFERETFLVIADATEVPHSDVHRFEKISNIVKQFKLSVSKTSLKFEGMMV 947
            SA    KKVLLMG+S SGKTSMRSIIFA+Y A+DT+RL PT+DVE SHVRFLG++ ++LWDCGGQD FY  Y  H +D IFRSVE+LIYVFD+ES +   D  +Y  V+EA++++SPDARV+VL+HKMDLV +E RE++FM+++  ++S   G + ++FF TSIWDETLY+AWS IVYSL+PN  +LES+L  FC +CG DEVVLFE  TFLVIA AT +PHSD+HRFEKISNI+KQFKLS  K    FEGM+V
Sbjct:    2 SALPSTKKVLLMGRSGSGKTSMRSIIFADYLARDTMRLSPTIDVEYSHVRFLGNLHLHLWDCGGQDDFYRNYLEHMRDHIFRSVELLIYVFDIESEEEGNDFSQYVDVVEALEQHSPDARVYVLVHKMDLVKDEARESIFMDKRASILSQTGGQLRISFFRTSIWDETLYRAWSHIVYSLVPNTALLESNLNAFCALCGTDEVVLFESTTFLVIAHATFMPHSDIHRFEKISNIIKQFKLSCRKVQAHFEGMLV 255
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BLAST of mRNA_S-firma_M_contig9673.20663.1 vs. uniprot
Match: A0A8J2SYR4_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SYR4_9STRA)

HSP 1 Score: 327 bits (839), Expect = 8.460e-109
Identity = 160/248 (64.52%), Postives = 196/248 (79.03%), Query Frame = 3 
Query:  207 KKVLLMGKSRSGKTSMRSIIFANYGAKDTIRLGPTLDVENSHVRFLGDMEMNLWDCGGQDAFYDTYFNHQQDFIFRSVEVLIYVFDVESNDVSGDLERYRGVLEAVDRNSPDARVFVLIHKMDLVSEENRETVFMNRK-QVISDISGGVDLTFFMTSIWDETLYKAWSSIVYSLIPNMEVLESHLQNFCDICGADEVVLFERETFLVIADATEVPHSDVHRFEKISNIVKQFKLSVSKTSLKFEGMMV 947
            KKVLLMG+S SGKTSMRSIIFA+Y A+DT+RL PT+DVE SHVRFLG++ ++LWDCGGQD FY  Y  H +D IFRSVE+LIYVFD+ES +   D  ++  V+EAV+++SPDARV+VL+HKMDLV E+ R+ VF  ++  ++S  S  + +  F TSIWDETLY+AWS IVYSL+PN  +LESHL  +C ICGADEVVLFE  TFLVIA AT +PHSD HRFEKISNI+KQFKLS  K    FEGM+V
Sbjct:    7 KKVLLMGRSGSGKTSMRSIIFADYMARDTMRLSPTIDVEYSHVRFLGNLHLHLWDCGGQDDFYRNYLEHMRDHIFRSVELLIYVFDIESEEQGSDFSQFADVIEAVEQHSPDARVYVLVHKMDLVKEDVRKAVFSEKEASILSQASDHLRIQCFRTSIWDETLYRAWSHIVYSLVPNTALLESHLNEYCTICGADEVVLFESTTFLVIAHATCIPHSDTHRFEKISNIIKQFKLSCRKVQAHFEGMLV 254
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BLAST of mRNA_S-firma_M_contig9673.20663.1 vs. uniprot
Match: H3GWU9_PHYRM (Uncharacterized protein n=14 Tax=Peronosporaceae TaxID=4777 RepID=H3GWU9_PHYRM)

HSP 1 Score: 327 bits (837), Expect = 1.020e-108
Identity = 164/248 (66.13%), Postives = 195/248 (78.63%), Query Frame = 3 
Query:  204 KKKVLLMGKSRSGKTSMRSIIFANYGAKDTIRLGPTLDVENSHVRFLGDMEMNLWDCGGQDAFYDTYFNHQQDFIFRSVEVLIYVFDVESNDVSGDLERYRGVLEAVDRNSPDARVFVLIHKMDLVSEENRETVFMNRKQVISDISGGVDLTFFMTSIWDETLYKAWSSIVYSLIPNMEVLESHLQNFCDICGADEVVLFERETFLVIADATEVPHSDVHRFEKISNIVKQFKLSVSKTSLKFEGMMV 947
            KKKVLLMGKS SGKTSMRSIIFANY           +DVE+SHVRFLG++ +NLWDCGGQDAFY+ YF  Q+D IFRSVE+LIYVFD+ES ++  D+  + G LEA+D+NS +A+VFVLIHKMDLV E+ RE VF  +K++I D +G +    F TSIWDETLY+AWSSIVYSLIPNM+ LE HL +FC IC ADEVVLFER TFLVI+ AT   H D+HRFEKISNI+KQFKLS SKT  +F+GM V
Sbjct:    2 KKKVLLMGKSGSGKTSMRSIIFANY----------LVDVEHSHVRFLGNLVLNLWDCGGQDAFYENYFESQRDHIFRSVELLIYVFDIESREIDKDMAHFDGCLEAIDQNSSNAKVFVLIHKMDLVPEDQRERVFNQKKEMILDRTGQLPTVCFGTSIWDETLYRAWSSIVYSLIPNMQDLEKHLNSFCSICSADEVVLFERATFLVISHATHTNHRDIHRFEKISNIIKQFKLSCSKTQAQFQGMEV 239
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig9673.20663.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LQF2_ECTSI2.000e-15890.40GTR1, Ras superfamily GTPase n=2 Tax=Ectocarpus Ta... [more]
A0A835Z771_9STRA1.330e-12673.60Putative ras-related GTP binding protein n=1 Tax=T... [more]
W7TTY0_9STRA2.500e-11969.17Ras-related gtp-binding protein n=2 Tax=Monodopsid... [more]
A0A7S2V5Y6_9STRA1.700e-11869.84Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A067CTB0_SAPPC1.300e-11669.35Ras-like GTP-binding protein A n=12 Tax=Saprolegni... [more]
A0A6V1W998_HETAK1.220e-11568.25Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
F0VZ80_9STRA4.300e-11567.74Rasrelated GTPbinding protein putative n=14 Tax=Oo... [more]
F0YHE9_AURAN4.640e-11163.78Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A8J2SYR4_9STRA8.460e-10964.52Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
H3GWU9_PHYRM1.020e-10866.13Uncharacterized protein n=14 Tax=Peronosporaceae T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig9673contigS-firma_M_contig9673:353..3815 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-19
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score454.9
Seed ortholog evalue2.4e-125
Seed eggNOG ortholog2880.D8LQF2
Preferred nameRRAGB
KEGG koko:K16185
KEGG Pathwayko04140,ko04150,map04140,map04150
GOsGO:0000003,GO:0000166,GO:0000322,GO:0000323,GO:0000324,GO:0000329,GO:0001101,GO:0001558,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005515,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005764,GO:0005768,GO:0005770,GO:0005773,GO:0005774,GO:0005829,GO:0006139,GO:0006325,GO:0006342,GO:0006348,GO:0006351,GO:0006355,GO:0006360,GO:0006383,GO:0006464,GO:0006725,GO:0006807,GO:0006810,GO:0006811,GO:0006817,GO:0006820,GO:0006950,GO:0006995,GO:0006996,GO:0007049,GO:0007050,GO:0007154,GO:0007165,GO:0007264,GO:0007275,GO:0007568,GO:0008104,GO:0008150,GO:0008152,GO:0008219,GO:0008340,GO:0009058,GO:0009059,GO:0009267,GO:0009605,GO:0009719,GO:0009889,GO:0009890,GO:0009892,GO:0009894,GO:0009895,GO:0009966,GO:0009967,GO:0009968,GO:0009987,GO:0009991,GO:0010008,GO:0010033,GO:0010243,GO:0010259,GO:0010467,GO:0010468,GO:0010506,GO:0010507,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0010646,GO:0010647,GO:0010648,GO:0012505,GO:0015698,GO:0016020,GO:0016032,GO:0016043,GO:0016070,GO:0016241,GO:0016458,GO:0016462,GO:0016567,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0018130,GO:0019001,GO:0019048,GO:0019219,GO:0019222,GO:0019438,GO:0019538,GO:0019899,GO:0022402,GO:0023051,GO:0023052,GO:0023056,GO:0023057,GO:0030307,GO:0031090,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031329,GO:0031330,GO:0031410,GO:0031625,GO:0031667,GO:0031668,GO:0031669,GO:0031902,GO:0031982,GO:0032006,GO:0032007,GO:0032008,GO:0032446,GO:0032501,GO:0032502,GO:0032504,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0032774,GO:0032991,GO:0033036,GO:0033365,GO:0033554,GO:0034198,GO:0034448,GO:0034613,GO:0034641,GO:0034645,GO:0034654,GO:0035556,GO:0035639,GO:0035821,GO:0036094,GO:0036211,GO:0040008,GO:0040014,GO:0040018,GO:0040029,GO:0042221,GO:0042268,GO:0042594,GO:0042802,GO:0042803,GO:0043167,GO:0043168,GO:0043170,GO:0043200,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043562,GO:0044003,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044389,GO:0044403,GO:0044419,GO:0044422,GO:0044424,GO:0044425,GO:0044433,GO:0044437,GO:0044440,GO:0044444,GO:0044446,GO:0044464,GO:0045786,GO:0045814,GO:0045892,GO:0045919,GO:0045927,GO:0045934,GO:0046483,GO:0046982,GO:0046983,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048585,GO:0048638,GO:0048639,GO:0048856,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051020,GO:0051094,GO:0051128,GO:0051171,GO:0051172,GO:0051179,GO:0051219,GO:0051234,GO:0051239,GO:0051240,GO:0051252,GO:0051253,GO:0051276,GO:0051641,GO:0051701,GO:0051704,GO:0051716,GO:0051726,GO:0051817,GO:0060255,GO:0065007,GO:0070647,GO:0070727,GO:0070887,GO:0071229,GO:0071230,GO:0071310,GO:0071417,GO:0071495,GO:0071496,GO:0071704,GO:0071840,GO:0072657,GO:0072665,GO:0080090,GO:0090304,GO:0097159,GO:0097367,GO:0097659,GO:0097708,GO:0098588,GO:0098796,GO:0098805,GO:0098852,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901576,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1902531,GO:1902532,GO:1902533,GO:1902679,GO:1903432,GO:1903506,GO:1903507,GO:1903778,GO:1904262,GO:1904263,GO:1990131,GO:1990253,GO:1990928,GO:2000112,GO:2000113,GO:2001141
EggNOG free text desc.interleukin-4 receptor binding
EggNOG OGsKOG3886@1,KOG3886@2759
COG Functional cat.T
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001
Hectar predicted targeting categorymitochondrion
Ec32 ortholog descriptionGTR1, Ras superfamily GTPase
Ec32 orthologEc-10_005400.1
Exons6
Model size947
Cds size750
Stop0
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622828803.635113-UTR-S-firma_M_contig9673:352..5491622828803.635113-UTR-S-firma_M_contig9673:352..549Sphaerotrichia firma Sfir_13m maleUTRS-firma_M_contig9673 353..549 +
1697105172.2212214-UTR-S-firma_M_contig9673:352..5491697105172.2212214-UTR-S-firma_M_contig9673:352..549Sphaerotrichia firma Sfir_13m maleUTRS-firma_M_contig9673 353..549 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622828803.652708-CDS-S-firma_M_contig9673:549..6891622828803.652708-CDS-S-firma_M_contig9673:549..689Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig9673 550..689 +
1697105172.2384698-CDS-S-firma_M_contig9673:549..6891697105172.2384698-CDS-S-firma_M_contig9673:549..689Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig9673 550..689 +
1622828803.6694357-CDS-S-firma_M_contig9673:1179..12851622828803.6694357-CDS-S-firma_M_contig9673:1179..1285Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig9673 1180..1285 +
1697105172.2496874-CDS-S-firma_M_contig9673:1179..12851697105172.2496874-CDS-S-firma_M_contig9673:1179..1285Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig9673 1180..1285 +
1622828803.6821005-CDS-S-firma_M_contig9673:1820..19241622828803.6821005-CDS-S-firma_M_contig9673:1820..1924Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig9673 1821..1924 +
1697105172.2611701-CDS-S-firma_M_contig9673:1820..19241697105172.2611701-CDS-S-firma_M_contig9673:1820..1924Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig9673 1821..1924 +
1622828803.6973808-CDS-S-firma_M_contig9673:2571..27221622828803.6973808-CDS-S-firma_M_contig9673:2571..2722Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig9673 2572..2722 +
1697105172.2726262-CDS-S-firma_M_contig9673:2571..27221697105172.2726262-CDS-S-firma_M_contig9673:2571..2722Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig9673 2572..2722 +
1622828803.7142308-CDS-S-firma_M_contig9673:3202..32821622828803.7142308-CDS-S-firma_M_contig9673:3202..3282Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig9673 3203..3282 +
1697105172.2849765-CDS-S-firma_M_contig9673:3202..32821697105172.2849765-CDS-S-firma_M_contig9673:3202..3282Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig9673 3203..3282 +
1622828803.7283792-CDS-S-firma_M_contig9673:3646..38151622828803.7283792-CDS-S-firma_M_contig9673:3646..3815Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig9673 3647..3815 +
1697105172.2992396-CDS-S-firma_M_contig9673:3646..38151697105172.2992396-CDS-S-firma_M_contig9673:3646..3815Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig9673 3647..3815 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig9673.20663.1prot_S-firma_M_contig9673.20663.1Sphaerotrichia firma Sfir_13m malepolypeptideS-firma_M_contig9673 550..3815 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-firma_M_contig9673.20663.1

>prot_S-firma_M_contig9673.20663.1 ID=prot_S-firma_M_contig9673.20663.1|Name=mRNA_S-firma_M_contig9673.20663.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=250bp
MGKKKVLLMGKSRSGKTSMRSIIFANYGAKDTIRLGPTLDVENSHVRFLG
DMEMNLWDCGGQDAFYDTYFNHQQDFIFRSVEVLIYVFDVESNDVSGDLE
RYRGVLEAVDRNSPDARVFVLIHKMDLVSEENRETVFMNRKQVISDISGG
VDLTFFMTSIWDETLYKAWSSIVYSLIPNMEVLESHLQNFCDICGADEVV
LFERETFLVIADATEVPHSDVHRFEKISNIVKQFKLSVSKTSLKFEGMMV
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mRNA from alignment at S-firma_M_contig9673:353..3815+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-firma_M_contig9673.20663.1 ID=mRNA_S-firma_M_contig9673.20663.1|Name=mRNA_S-firma_M_contig9673.20663.1|organism=Sphaerotrichia firma Sfir_13m male|type=mRNA|length=3463bp|location=Sequence derived from alignment at S-firma_M_contig9673:353..3815+ (Sphaerotrichia firma Sfir_13m male)
GTCTCGAGCTCGGCGCAAGCCTGACATCCAGCAGTGAACCGCCGGCTCCG
CAGGAAACGCGGAAGTGGAGTCTAGTCCTAACCTCTCGAGCGCCCTTATC
TCCAGCACTGCCGACGACAACAAATCTTGGGCATCTCGCCTAACAAGGAA
GAGCTGCCGATCTCCCACGGGAGAAGAGAGTTGGTGCTAGTGCTGCGATG
GGGAAAAAGAAGGTGCTTCTGATGGGCAAGTCCCGCTCGGGCAAGACGTC
GATGCGCTCCATCATCTTCGCCAACTACGGGGCCAAGGACACCATCCGCC
TCGGACCCACGTTGGACGTCGAGAACTCACACGTCAGGTGCGTTTTCTTT
CGTGCGTGCGTGTGGGCGTTGAACGTGTTGGCGAAACAAGGTGCAATTCG
AGTTGACTTTGTGGTCAAAAGTTGAATATATGCACAACATGCCGCCGGCC
GAAAGAAAGCCTGCTCACCTCTTGGCCAGCCTCTCCCGCCACAAACCTGC
ACACCCAAGCTTTCGACTTCAAACCTGCAGCACACAGCAGCAGCAGCAGC
AGCAGCAGCAGCAGTCACGAATCTGTGTGCTCAGGCGTATGCTGTGCTAG
AGGGCGCGGTGCCGGTAGAAATTGCGAGAGCATGCCCCGTTGCACCCTCT
ACTGAAGCCGGGATCGAAGGAGGCCGCAAGCGCAGCAAGTAAAAAAAAAA
ACTCGGCGTTGAACCTAAAACCACGCCCCCGTTGAGTAGCTCCCGTGGGC
GATCGACCCTGACCTCTAGTGTGCTCGCCTCCGCCTCTGGTGCATGCGTG
CACGTGTGCTCCGGCGGTTCCTGGCAGATTTCTAGGGGATATGGAGATGA
ATCTTTGGGACTGCGGCGGGCAGGACGCGTTCTACGATACGTACTTCAAC
CACCAGCAGGATTTCATCTTCCGCTCCGTCGAGGTGAGAAGCATCGGAGT
CTTAACAAAAAGTTGATGTCATAGTTTCTCTTGGGACGGTATCTCGCCGC
CGTGGTGTTGATGTGCCACTCACTCGGCCCGGTACGTGCCCGTTCACCCG
CTAGTTATGTTGCTAGCCGCCGCCGCTGCCGCCGTGGCCGGCCATCAACG
CAAGCCACCTTCTGATGCTGCTGGTGGATAAATACCTTACTGGGGGATTT
GTCCCACGCAGGCAGGAAAGAATTAGTTGGCACTCTGTCCATATCCTTGA
ATGGTATGGCGATGTGGATGCTCGTCCAGCTCTTCGTCCTACTGCTGTAT
CGAACGAACGAGCGAATGCGGACTACCCAGAGCAGCAGCCGTGTCGGACA
AAGCTAAGAACGCCTCTTAGAGGGTATCCCTTGCTCATCCATCATCTCGT
GTAGGGAGCCCACTTGGTCGTTCAAGTGTCGGGCGAATATGTAGCTTTTC
GCCGCTAACTCTCGCCTCCTCCTATGCCGTGTGCTTGTTGTGCTTGTGCT
CGTGCTCGTGCTCGTAAGGTGCTGATCTACGTGTTCGACGTGGAGAGCAA
CGACGTCTCCGGCGACCTGGAGCGATACCGCGGCGTCTTGGAGGCGGTGG
ACCGCAACTCTCCAGATGCGAGGTGAGGGGCATACCTGCCGTGTCGCCAT
TTTTTGTCTTGTCTTGGCGGTCAGTCAGCCCCGTCGCCCGTCATACTCCT
CTGCTCCGCTTCGTGAGACCGGCTTCGTTGGCTTTGAACGGCGGCGGCGG
CTAGCAGCGAATATCCCTATCGTTCCGAGTGTCTCGATGTGTTGTACGCC
TACATGCGACGTTGTCTGGCTGTTGCCTTGATGGTTGCTGCCGTTAAACG
CCCCGCCCTTGCCTCGTTTATTTTTGGCATCTAGATGGTAGTGCATTCAG
AGTCGATTGTGCTGTGCCGCGTTGTTGGCGGCCGTATCTTCAGTCCAGGG
GTGTCACTCGCGGGAGCGTCCGGTGTCTGTTGTTTCCCGTGTTCCGGTGT
GCGAGGTAATCGTCGCCATTCCGTGAATCAGCTGGGAGGGCCGCTAGCAG
AGGCCGAATTATGGCGCAAATGGCCGTACGACGACCGACGTGTTTGCGAT
AGGCGCGAGCGGTGGAAATCCGGCGTACGCTGTCCTTTCTCTTGAGGCTG
CGTTCGGATGCTACTGCTGTATGCGTGCACGATCAATGAGGGACCACACA
CCCCCTCGCTCCATTTGATTAGTACCCCCTCCCCCTGTTCCCAACTTTGC
TTCCCGCCCCCCCCCCCAGGGTGTTTGTGCTGATCCACAAGATGGATCTG
GTGTCGGAGGAGAACCGAGAAACGGTCTTCATGAACCGAAAGCAGGTCAT
CTCTGACATTAGCGGCGGTGTTGACCTTACCTTCTTCATGACGTCCATCT
GGGACGAGACCCTGTACAAGGTATTCAATGGTCATGGTTGACAACGATTT
GAGAGTTGCCGTGGTTTGCTCTGGGCGTGGTCTTCTGCCTGATGTGGCGC
GCCGTGACGCACTGGTTATTCTTTTAAGCTTTAAGCGAGTTTTGTTTTTG
GGGTGTCCTGCCTGTGGTGTTGCTGGTGGTGTCCGTCGCTGTGCTGCTGC
TGTTGTTGCTGCTGGGGCTGGGGCTGGCTGCTGCTGGCTTGTGTGTGACT
GCCTGACATGGCCTTGGCGCATGGTATGTACCCGCTGCTGTTGGTCTCCG
TGCGGTGAAGTTCTTCATGCTTGCTTCTCCGTTTTGTTTGCCGCCGCCGC
CACCGCCGCCGTCGGCCGCTGTTGTCATGCTAAACTGTGCGCCTTGCTGC
CTATATCTCTCCGTGTTTTTTACCCACCGCGGGCTGCTTCAACTGCCGCT
GCTGCTGCTGCTGCTGCTACTTCCACGACAACTGCTGCTGCTGCTGCTAG
GCGTGGTCGTCCATCGTGTACTCTCTCATTCCAAACATGGAGGTGCTGGA
GAGCCATCTCCAGAACTTTTGCGATATTTGGTGAGCGGGTGGAGGGCGGA
CAATGGCGCTAGTTGCGGCGTCGCGGAGGTGTGACCGGGATCGTATCACC
GGGGTGTACGGGTGGGGGTGGGACCTACGACTGGCGGGTGGCGGTACCTC
TGAACGCTGCGTATCTAGAGAGGGGCATGGCAACGGGTAACCGAGTCGAG
CGTTGGTTCGATTCGATGTTTCGGTGGGTCGAGGTGCTTGTTTTGCTGTT
TGCGCGCTGTGTGCCGCCTTTGGCGATTGTCTGAGTGCTTCTGTAGTTTT
TCTCGGCGTGTCATAAGTGTGGCGCAAAATACCTATCAATCGTGCCGTTT
CTTGTGTGTGTTGTGTGTGTGTTGTGTTTTTCTATTGTTTGCAGTGGGGC
GGACGAGGTGGTCCTGTTCGAGCGGGAGACGTTTCTGGTGATCGCCGACG
CCACCGAGGTGCCTCACTCGGACGTCCACCGCTTCGAGAAGATCTCCAAC
ATCGTCAAGCAGTTCAAGCTCAGCGTCAGCAAGACGAGCCTAAAGTTTGA
GGGGATGATGGTG
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Coding sequence (CDS) from alignment at S-firma_M_contig9673:353..3815+

>mRNA_S-firma_M_contig9673.20663.1 ID=mRNA_S-firma_M_contig9673.20663.1|Name=mRNA_S-firma_M_contig9673.20663.1|organism=Sphaerotrichia firma Sfir_13m male|type=CDS|length=1500bp|location=Sequence derived from alignment at S-firma_M_contig9673:353..3815+ (Sphaerotrichia firma Sfir_13m male)
ATGGGGAAAAAGAAGGTGCTTCTGATGGGCAAGTCCCGCTCGGGCAAGAC
GTCGATGCGCTCCATCATCTTCGCCAACTACGGGGCCAAGGACACCATCC
GCCTCGGACCCACGTTGGACGTCGAGAACTCACACGTCAGATGGGGAAAA
AGAAGGTGCTTCTGATGGGCAAGTCCCGCTCGGGCAAGACGTCGATGCGC
TCCATCATCTTCGCCAACTACGGGGCCAAGGACACCATCCGCCTCGGACC
CACGTTGGACGTCGAGAACTCACACGTCAGATTTCTAGGGGATATGGAGA
TGAATCTTTGGGACTGCGGCGGGCAGGACGCGTTCTACGATACGTACTTC
AACCACCAGCAGGATTTCATCTTCCGCTCCGTCGAGATTTCTAGGGGATA
TGGAGATGAATCTTTGGGACTGCGGCGGGCAGGACGCGTTCTACGATACG
TACTTCAACCACCAGCAGGATTTCATCTTCCGCTCCGTCGAGGTGCTGAT
CTACGTGTTCGACGTGGAGAGCAACGACGTCTCCGGCGACCTGGAGCGAT
ACCGCGGCGTCTTGGAGGCGGTGGACCGCAACTCTCCAGATGCGAGGTGC
TGATCTACGTGTTCGACGTGGAGAGCAACGACGTCTCCGGCGACCTGGAG
CGATACCGCGGCGTCTTGGAGGCGGTGGACCGCAACTCTCCAGATGCGAG
GGTGTTTGTGCTGATCCACAAGATGGATCTGGTGTCGGAGGAGAACCGAG
AAACGGTCTTCATGAACCGAAAGCAGGTCATCTCTGACATTAGCGGCGGT
GTTGACCTTACCTTCTTCATGACGTCCATCTGGGACGAGACCCTGTACAA
GGGTGTTTGTGCTGATCCACAAGATGGATCTGGTGTCGGAGGAGAACCGA
GAAACGGTCTTCATGAACCGAAAGCAGGTCATCTCTGACATTAGCGGCGG
TGTTGACCTTACCTTCTTCATGACGTCCATCTGGGACGAGACCCTGTACA
AGGCGTGGTCGTCCATCGTGTACTCTCTCATTCCAAACATGGAGGTGCTG
GAGAGCCATCTCCAGAACTTTTGCGATATTTGGCGTGGTCGTCCATCGTG
TACTCTCTCATTCCAAACATGGAGGTGCTGGAGAGCCATCTCCAGAACTT
TTGCGATATTTGTGGGGCGGACGAGGTGGTCCTGTTCGAGCGGGAGACGT
TTCTGGTGATCGCCGACGCCACCGAGGTGCCTCACTCGGACGTCCACCGC
TTCGAGAAGATCTCCAACATCGTCAAGCAGTTCAAGCTCAGCGTCAGCAA
GACGAGCCTAAAGTTTGAGGGGATGATGGTGTGGGGCGGACGAGGTGGTC
CTGTTCGAGCGGGAGACGTTTCTGGTGATCGCCGACGCCACCGAGGTGCC
TCACTCGGACGTCCACCGCTTCGAGAAGATCTCCAACATCGTCAAGCAGT
TCAAGCTCAGCGTCAGCAAGACGAGCCTAAAGTTTGAGGGGATGATGGTG
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