mRNA_S-firma_M_contig9645.20644.1 (mRNA) Sphaerotrichia firma Sfir_13m male
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Overview
Homology
BLAST of mRNA_S-firma_M_contig9645.20644.1 vs. uniprot
Match: A0A6H5JVG6_9PHAE (TP_methylase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVG6_9PHAE) HSP 1 Score: 275 bits (704), Expect = 6.380e-87 Identity = 145/162 (89.51%), Postives = 155/162 (95.68%), Query Frame = 1
Query: 142 RSAQVAEDGVIYFVSTPIGNLEDITVRAINILRTADLIAAEDTRTTGSLLKLLGVEREGRLVSHHDHNTRRRVPEIVEAAREGKSVAVVSDAGTPGISDPGMKLAAACAAEGVRVVPVPGACAAVAAVSVSGFASQEFVFFGFVSGKRGSAVRRRKLTEIAQ 627
R QVAE GV+YFVSTPIGNLEDIT+RA+NILRTA++IAAEDTRTTGSLLKLLGVEREGRLVSHHDHNT+RRVPEIV+AAR GKSVAVVSDAGTPGISDPGM+LAAACAAEG+RVVPVPGACAAVAAVSV+GF S EFVFFGFVSGKRGSAVRRRKL EIAQ
Sbjct: 182 RPGQVAEPGVVYFVSTPIGNLEDITLRAMNILRTAEVIAAEDTRTTGSLLKLLGVEREGRLVSHHDHNTKRRVPEIVQAARGGKSVAVVSDAGTPGISDPGMELAAACAAEGLRVVPVPGACAAVAAVSVAGFPSHEFVFFGFVSGKRGSAVRRRKLAEIAQ 343
BLAST of mRNA_S-firma_M_contig9645.20644.1 vs. uniprot
Match: D8LLL3_ECTSI (TP_methylase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLL3_ECTSI) HSP 1 Score: 275 bits (704), Expect = 6.710e-87 Identity = 145/162 (89.51%), Postives = 155/162 (95.68%), Query Frame = 1
Query: 142 RSAQVAEDGVIYFVSTPIGNLEDITVRAINILRTADLIAAEDTRTTGSLLKLLGVEREGRLVSHHDHNTRRRVPEIVEAAREGKSVAVVSDAGTPGISDPGMKLAAACAAEGVRVVPVPGACAAVAAVSVSGFASQEFVFFGFVSGKRGSAVRRRKLTEIAQ 627
R QVAE G++YFVSTPIGNLEDIT+RA+NILRTAD+IAAEDTRTTGSLLKLLGVER+GRLVSHHDHNT+RRVPEIVEAAR GKSVAVVSDAGTPGISDPGM+LAAACAAEG+RVVPVPGACAAVAAVSV+GF S EFVFFGFVSGKRGSAVRRRKL EIAQ
Sbjct: 175 RPGQVAEPGMVYFVSTPIGNLEDITLRAMNILRTADVIAAEDTRTTGSLLKLLGVERKGRLVSHHDHNTKRRVPEIVEAARGGKSVAVVSDAGTPGISDPGMELAAACAAEGLRVVPVPGACAAVAAVSVAGFPSHEFVFFGFVSGKRGSAVRRRKLAEIAQ 336
BLAST of mRNA_S-firma_M_contig9645.20644.1 vs. uniprot
Match: A0A4D9CZ36_9STRA (TP_methylase domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CZ36_9STRA) HSP 1 Score: 172 bits (436), Expect = 1.390e-49 Identity = 92/155 (59.35%), Postives = 122/155 (78.71%), Query Frame = 1
Query: 166 GVIYFVSTPIGNLEDITVRAINILRTADLIAAEDTRTTGSLLKLLGVEREGRLVSHHDHNTRRRVPEIVEAAREGK-SVAVVSDAGTPGISDPGMKLAAACAAEGVRVVPVPGACAAVAAVSVSGFASQEFVFFGFVSGKRGSAVRRRKLTEIAQ 627
G IYFVSTP+GNL DIT+RA+++LR DLIA+EDTRTTG LLK LG+ ++ + VSHH HN + RVP+++ A+E + S+AVVSDAGTPG+SDPG +LAAAC GV +VPVPGACAAVAA+S++GF S EF F GF+ + G VR+ ++ + A+
Sbjct: 3 GTIYFVSTPLGNLGDITLRALDVLRGVDLIASEDTRTTGLLLKALGLGKKPQ-VSHHQHNIQSRVPDLIRRAQEERLSIAVVSDAGTPGVSDPGSELAAACWTAGVPLVPVPGACAAVAAISIAGFPSTEFTFIGFLPSRSGK-VRQAEVAKAAR 155
BLAST of mRNA_S-firma_M_contig9645.20644.1 vs. uniprot
Match: A0A7S4FCJ4_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4FCJ4_CHRCT) HSP 1 Score: 177 bits (450), Expect = 2.370e-49 Identity = 94/162 (58.02%), Postives = 124/162 (76.54%), Query Frame = 1
Query: 142 RSAQVAEDGVIYFVSTPIGNLEDITVRAINILRTADLIAAEDTRTTGSLLKLLGVEREGRLVSHHDHNTRRRVPEIVEAAREGKSVAVVSDAGTPGISDPGMKLAAACAAEGVRVVPVPGACAAVAAVSVSGFASQEFVFFGFVSGKRGSAVRRRKLTEIAQ 627
R + G +YFVSTPIGNLEDIT+RA+ LR D++A+EDTR T LL+ LGV ++ LVSHH+HNTR +P++++ A +G S+AVVSDAGTPGISDPGM+LAA CAA V +VPVPGACAA+AA+S+SG+A+ EF F GF+ R RR+++ E+AQ
Sbjct: 226 RMSSTVRPGHVYFVSTPIGNLEDITLRAVRTLRQVDVVASEDTRHTSRLLRHLGVGKK-LLVSHHEHNTRAAIPKLLQYAAQGLSIAVVSDAGTPGISDPGMELAAECAAASVPLVPVPGACAAIAALSISGYANTEFCFGGFLP--RAGKARRQRVVELAQ 384
BLAST of mRNA_S-firma_M_contig9645.20644.1 vs. uniprot
Match: W7TJ55_9STRA (Tetrapyrrole methylase family protein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TJ55_9STRA) HSP 1 Score: 172 bits (437), Expect = 2.270e-48 Identity = 93/155 (60.00%), Postives = 122/155 (78.71%), Query Frame = 1
Query: 166 GVIYFVSTPIGNLEDITVRAINILRTADLIAAEDTRTTGSLLKLLGVEREGRLVSHHDHNTRRRVPEIVEAAREGK-SVAVVSDAGTPGISDPGMKLAAACAAEGVRVVPVPGACAAVAAVSVSGFASQEFVFFGFVSGKRGSAVRRRKLTEIAQ 627
G IYFVSTP+GNL DIT+RA+++LR DLIA+EDTRTTG LLK LG+ ++ + VSHH HN + RVP+++ A+E + S+AVVSDAGTPG+SDPG +LAAAC GV +VPVPGACAAVAA+SV+GF S EF F GF+ + G VR+ ++ + A+
Sbjct: 135 GTIYFVSTPLGNLGDITLRALDVLRGVDLIASEDTRTTGLLLKALGLGKKPQ-VSHHQHNIQSRVPDLIRRAQEERLSIAVVSDAGTPGVSDPGSELAAACWTAGVPLVPVPGACAAVAAISVAGFPSTEFTFIGFLPSRSGK-VRQAEVAKAAR 287
BLAST of mRNA_S-firma_M_contig9645.20644.1 vs. uniprot
Match: A0A6V1TAB6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1TAB6_HETAK) HSP 1 Score: 172 bits (435), Expect = 2.750e-48 Identity = 91/158 (57.59%), Postives = 119/158 (75.32%), Query Frame = 1
Query: 157 AEDGVIYFVSTPIGNLEDITVRAINILRTADLIAAEDTRTTGSLLKLLGVEREGRLVSHHDHNTRRRVPEIVEAARE-GKSVAVVSDAGTPGISDPGMKLAAACAAEGVRVVPVPGACAAVAAVSVSGFASQEFVFFGFVSGKRGSAVRRRKLTEIAQ 627
A+ G +YFV+TPIGNL DIT RA ILRT D++A+EDTR TG LL+ L ++ R +SHH+HN + RVP+++ ARE G+S+AVVSDAGTPGI+DPG LA ACA GV +P+PG CAA AA+SV+G + E+VFFGF+ KRG+A R KL E+ +
Sbjct: 109 AQPGTVYFVATPIGNLGDITYRAAEILRTVDIVASEDTRRTGRLLQYLNAGKK-RQISHHEHNWKGRVPQLIALAREEGRSIAVVSDAGTPGIADPGTPLARACAEAGVPAIPIPGPCAAAAALSVAGVYASEYVFFGFLPAKRGTA-RTAKLREVLE 264
BLAST of mRNA_S-firma_M_contig9645.20644.1 vs. uniprot
Match: A0A524GWV9_9DELT (Ribosomal RNA small subunit methyltransferase I n=1 Tax=Syntrophobacterales bacterium TaxID=2282155 RepID=A0A524GWV9_9DELT) HSP 1 Score: 166 bits (419), Expect = 4.070e-47 Identity = 90/155 (58.06%), Postives = 116/155 (74.84%), Query Frame = 1
Query: 157 AEDGVIYFVSTPIGNLEDITVRAINILRTADLIAAEDTRTTGSLLKLLGVEREGRLVSHHDHNTRRRVPEIVEAAREGKSVAVVSDAGTPGISDPGMKLAAACAAEGVRVVPVPGACAAVAAVSVSGFASQEFVFFGFVSGKRGSAVRRRKLTEI 621
AE GV+Y V+TPIGNLEDIT+RA+ +LR+ADL+AAEDTR T LL G+ + LVS+HDHN RR PE+++ R+G SVA+VS+AGTPGISDPG +L +A A G+R+VPVPGA AA AA+S SG + FVF GF+S K G ++LT+I
Sbjct: 14 AETGVLYVVATPIGNLEDITLRALAVLRSADLVAAEDTRKTSQLLSRHGITKS--LVSYHDHNESRRTPELLQRLRQGASVALVSNAGTPGISDPGYRLVSAAAEAGLRIVPVPGATAAAAALSASGLPTDAFVFVGFLSKKAG-----KRLTQI 161
BLAST of mRNA_S-firma_M_contig9645.20644.1 vs. uniprot
Match: A0A8J5XH93_DIALT (TP_methylase domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XH93_DIALT) HSP 1 Score: 167 bits (423), Expect = 1.060e-46 Identity = 96/159 (60.38%), Postives = 120/159 (75.47%), Query Frame = 1
Query: 151 QVAEDGVIYFVSTPIGNLEDITVRAINILRTADLIAAEDTRTTGSLLKLLGVEREGRLVSHHDHNTRRRVPEIVEAAR-EGKSVAVVSDAGTPGISDPGMKLAAACAAEGVRVVPVPGACAAVAAVSVSGFASQEFVFFGFVSGKRGSAVRRRKLTEIA 624
+ A G +YFV+TPIG+L+DIT+RA+ +LR AD+IAAEDTR TG LL G+ + +LVSHH+HN VPE+V AR EG+++A+VSDAGTPGISDPG +LAAAC GV VVP+PGACAAVAA+SV+G A E+VFFGFV A RRR L +A
Sbjct: 68 RAAARGTVYFVATPIGHLDDITLRALRVLRDADVIAAEDTRRTGVLLAHHGISAK-KLVSHHEHNAHASVPELVRRARDEGEAIALVSDAGTPGISDPGARLAAACVEAGVPVVPLPGACAAVAALSVAG-ALGEWVFFGFVPAT--GAERRRALARVA 222
BLAST of mRNA_S-firma_M_contig9645.20644.1 vs. uniprot
Match: A0A0M0JQE6_9EUKA (Ribosomal RNA small subunit methyltransferase i n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JQE6_9EUKA) HSP 1 Score: 160 bits (406), Expect = 7.490e-45 Identity = 86/154 (55.84%), Postives = 112/154 (72.73%), Query Frame = 1
Query: 160 EDGVIYFVSTPIGNLEDITVRAINILRTADLIAAEDTRTTGSLLKLLGVEREGRLVSHHDHNTRRRVPEIVEAAREGKSVAVVSDAGTPGISDPGMKLAAACAAEGVRVVPVPGACAAVAAVSVSGFASQEFVFFGFVSGKRGSAVRRRKLTEI 621
E +Y+V+TPIGNLEDIT+RA+ LR D++A EDTR T LL+ L + + +LV+HHDHN VP+++E G SVAVVSDAGTPGISDPG+ LAA CA + +VPVPGACAAVAA+SVSGF S EF+F GF+ R + R+ ++ E+
Sbjct: 27 EARTLYYVATPIGNLEDITLRAVRTLREVDVVATEDTRVTLGLLRHLHIGPK-KLVAHHDHNLASSVPKLIELLEGGASVAVVSDAGTPGISDPGLALAAECARRSIPIVPVPGACAAVAAISVSGFVSTEFIFGGFLP--RSGSGRKARIAEM 177
BLAST of mRNA_S-firma_M_contig9645.20644.1 vs. uniprot
Match: A0A7C4QTC5_9DELT (Ribosomal RNA small subunit methyltransferase I n=1 Tax=Desulfobacteraceae bacterium TaxID=2049433 RepID=A0A7C4QTC5_9DELT) HSP 1 Score: 155 bits (393), Expect = 3.500e-43 Identity = 84/153 (54.90%), Postives = 113/153 (73.86%), Query Frame = 1
Query: 166 GVIYFVSTPIGNLEDITVRAINILRTADLIAAEDTRTTGSLLKLLGVEREGRLVSHHDHNTRRRVPEIVEAAREGKSVAVVSDAGTPGISDPGMKLAAACAAEGVRVVPVPGACAAVAAVSVSGFASQEFVFFGFVSGKRGSAVRRRKLTEIA 624
GV+Y V+TPIG+ EDIT+RA+ +L++A L+AAEDTR +G LL+ G+ RLVS+H+HN R R P++V G+++A+VS+AGTPGISDPG +L +A AA GVRVVPVPG AA+AA+S SG + FVF GF+ K G RRR+L +A
Sbjct: 14 GVLYVVATPIGHREDITLRALAVLKSASLVAAEDTRKSGELLRHFGIR--ARLVSYHEHNERERTPQLVSRLLAGETIALVSNAGTPGISDPGFRLVSAAAAAGVRVVPVPGPSAAIAALSASGLPTDAFVFEGFLPKKPGR--RRRRLAALA 162 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig9645.20644.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_M_contig9645.20644.1 >prot_S-firma_M_contig9645.20644.1 ID=prot_S-firma_M_contig9645.20644.1|Name=mRNA_S-firma_M_contig9645.20644.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=209bp GGSGGDNRRSIRSASASVPSSSIWSLPQQQADGSRRSTSTSASATAGRSAback to top mRNA from alignment at S-firma_M_contig9645:1572..3835+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_M_contig9645.20644.1 ID=mRNA_S-firma_M_contig9645.20644.1|Name=mRNA_S-firma_M_contig9645.20644.1|organism=Sphaerotrichia firma Sfir_13m male|type=mRNA|length=2264bp|location=Sequence derived from alignment at S-firma_M_contig9645:1572..3835+ (Sphaerotrichia firma Sfir_13m male)back to top Coding sequence (CDS) from alignment at S-firma_M_contig9645:1572..3835+ >mRNA_S-firma_M_contig9645.20644.1 ID=mRNA_S-firma_M_contig9645.20644.1|Name=mRNA_S-firma_M_contig9645.20644.1|organism=Sphaerotrichia firma Sfir_13m male|type=CDS|length=1254bp|location=Sequence derived from alignment at S-firma_M_contig9645:1572..3835+ (Sphaerotrichia firma Sfir_13m male)back to top |