mRNA_S-firma_M_contig9616.20613.1 (mRNA) Sphaerotrichia firma Sfir_13m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-firma_M_contig9616.20613.1
Unique NamemRNA_S-firma_M_contig9616.20613.1
TypemRNA
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Homology
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BLAST of mRNA_S-firma_M_contig9616.20613.1 vs. uniprot
Match: D7FUR6_ECTSI (Glycerol-3-phosphate dehydrogenase [NAD(+)] n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUR6_ECTSI)

HSP 1 Score: 332 bits (850), Expect = 1.250e-110
Identity = 176/194 (90.72%), Postives = 181/194 (93.30%), Query Frame = 1 
Query:    4 QFLGRVLPTVAEALGLGPSGD--GAAPVGRRIRAVSLIKGVDKGPDGLKLISDHIREGLFGAVPLGLADEDYLSCRAEGLSVTSDADTHTLRLLFDRPTFRVTVVRNASATVELCGALKNVVALGAAFCDGLGYGGNTKAAIVRTGLAEMRIFAERLRTDAS-FDATASSRAFLESCGIGDLMTTCYGASRNRK 576
            QFLGRVLPTVAEALGL  SG   G AP GRRIRAVSLIKGVDKGPDGLKLISDHIREGL GAVPLGLADEDY SCRA GLSVT+DADT TLRLLF+RPTFRVTVVRNASATVELCGALKNVVALGAAFCDGLGYGGNTKAAIVRTGLAEM++FA+RLR DAS FDATASSRAFLESCGIGDLMTTCYGASRNRK
Sbjct:  146 QFLGRVLPTVAEALGLTKSGGTAGVAPGGRRIRAVSLIKGVDKGPDGLKLISDHIREGLCGAVPLGLADEDYASCRAAGLSVTADADTDTLRLLFNRPTFRVTVVRNASATVELCGALKNVVALGAAFCDGLGYGGNTKAAIVRTGLAEMQVFAQRLRCDASAFDATASSRAFLESCGIGDLMTTCYGASRNRK 339
[Close]
BLAST of mRNA_S-firma_M_contig9616.20613.1 vs. uniprot
Match: A0A6H5JZY6_9PHAE (Glycerol-3-phosphate dehydrogenase [NAD(+)] n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZY6_9PHAE)

HSP 1 Score: 318 bits (816), Expect = 1.040e-105
Identity = 176/216 (81.48%), Postives = 182/216 (84.26%), Query Frame = 1 
Query:    4 QFLGRVLPTVAEALGLGPSGD--GAAPVGRRIRAVSLIKGVDKGPDGLKLISDHIREGLFGAVP----------------------LGLADEDYLSCRAEGLSVTSDADTHTLRLLFDRPTFRVTVVRNASATVELCGALKNVVALGAAFCDGLGYGGNTKAAIVRTGLAEMRIFAERLRTDAS-FDATASSRAFLESCGIGDLMTTCYGASRNRK 576
            QFLGRVLPTVAEALGL  SG   GAAP GRRIRAVSLIKGVDKGPDGLKLISDHIREGL GAVP                      LGLADEDY SCRA GLSVT+DADT TLRLLF+RPTFRVTVVR+ASATVELCGALKNVVALGAAFCDGLGYGGNTKAAIVRTGLAEM++FA+RLR DAS FDATASSRAFLESCGIGDLMTTCYGASRNRK
Sbjct:  130 QFLGRVLPTVAEALGLTKSGGNAGAAPGGRRIRAVSLIKGVDKGPDGLKLISDHIREGLCGAVPVSVLMGANVANEVARDELCESTLGLADEDYASCRAAGLSVTADADTDTLRLLFNRPTFRVTVVRDASATVELCGALKNVVALGAAFCDGLGYGGNTKAAIVRTGLAEMQVFAQRLRCDASSFDATASSRAFLESCGIGDLMTTCYGASRNRK 345
[Close]
BLAST of mRNA_S-firma_M_contig9616.20613.1 vs. uniprot
Match: A0A3Q3KGG7_MONAL (Glycerol-3-phosphate dehydrogenase [NAD(+)] n=2 Tax=Monopterus albus TaxID=43700 RepID=A0A3Q3KGG7_MONAL)

HSP 1 Score: 150 bits (379), Expect = 7.500e-41
Identity = 92/167 (55.09%), Postives = 108/167 (64.67%), Query Frame = 1 
Query:  100 VSLIKGVDKGPDGLKLISDHIREGL-------FGA-VPLGLADEDYLSCRAEGLSVTSDADTHTLRLLFDRPTFRVTVVRNASATVELCGALKNVVALGAAFCDGLGYGGNTKAAIVRTGLAEMRIFAERLRTDASFDATASSRAFLESCGIGDLMTTCYGASRNRK 576
            +SLIKGVD+GPDGLKLISD IRE L        GA +   +ADE +  C    +   +DA+ H  + L   P FR+TVVR  S TVELCGALKN+VA+GA FCDGLG G NTKAA++R GL EM  FA           T SS  FLESCG+ DL+TTCYG  RNRK
Sbjct:  116 ISLIKGVDEGPDGLKLISDIIREKLEIDVSVLMGANIASEVADEKF--CETT-IGAKNDANGHIFKELLQTPNFRITVVRE-SDTVELCGALKNIVAVGAGFCDGLGCGDNTKAAVIRLGLMEMIAFARLF-----CKGTVSSSTFLESCGVADLITTCYGG-RNRK 272
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BLAST of mRNA_S-firma_M_contig9616.20613.1 vs. uniprot
Match: A0A665WHH0_ECHNA (Glycerol-3-phosphate dehydrogenase [NAD(+)] n=46 Tax=Percomorphaceae TaxID=1489872 RepID=A0A665WHH0_ECHNA)

HSP 1 Score: 146 bits (369), Expect = 2.380e-39
Identity = 89/167 (53.29%), Postives = 108/167 (64.67%), Query Frame = 1 
Query:  100 VSLIKGVDKGPDGLKLISDHIREGL-------FGA-VPLGLADEDYLSCRAEGLSVTSDADTHTLRLLFDRPTFRVTVVRNASATVELCGALKNVVALGAAFCDGLGYGGNTKAAIVRTGLAEMRIFAERLRTDASFDATASSRAFLESCGIGDLMTTCYGASRNRK 576
            +SLIKG+D+GPDGLKLISD IRE L        GA +   +ADE +  C    +   S+A+    + L   P FR+TVV N S TVELCGALKN+VA+GA FCDGLG+G NTKAA++R GL EM  FA+            SS  FLESCG+ DL+TTCYG  RNRK
Sbjct:  118 ISLIKGIDEGPDGLKLISDIIREKLEIEVSVLMGANIASEVADEKF--CETT-IGAKSEANGQIFKELLQTPNFRITVV-NESDTVELCGALKNIVAVGAGFCDGLGFGDNTKAAVIRLGLMEMVAFAKLF-----CKGQVSSSTFLESCGVADLITTCYGG-RNRK 274
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BLAST of mRNA_S-firma_M_contig9616.20613.1 vs. uniprot
Match: A0A8C4IU65_DICLA (Glycerol-3-phosphate dehydrogenase [NAD(+)] n=1 Tax=Dicentrarchus labrax TaxID=13489 RepID=A0A8C4IU65_DICLA)

HSP 1 Score: 147 bits (371), Expect = 3.670e-39
Identity = 89/167 (53.29%), Postives = 109/167 (65.27%), Query Frame = 1 
Query:  100 VSLIKGVDKGPDGLKLISDHIREGL-------FGA-VPLGLADEDYLSCRAEGLSVTSDADTHTLRLLFDRPTFRVTVVRNASATVELCGALKNVVALGAAFCDGLGYGGNTKAAIVRTGLAEMRIFAERLRTDASFDATASSRAFLESCGIGDLMTTCYGASRNRK 576
            +SLIKG+D+GPDGLKLISD IRE L        GA +   +ADE +  C    +   ++A+    + L   P FR+TVV   S TVELCGALKN+VA+GA FCDGLG+G NTKAA++R GL EM  FA+  R D       SS  FLESCG+ DL+TTCYG  RNRK
Sbjct:  173 ISLIKGIDEGPDGLKLISDIIREKLEIEVSVLMGANIASEVADEKF--CETT-IGARNEANGVIFKELLQTPNFRITVVEE-SDTVELCGALKNIVAVGAGFCDGLGFGDNTKAAVIRLGLMEMIAFAKLFRKD-----QVSSTTFLESCGVADLITTCYGG-RNRK 329
[Close]
BLAST of mRNA_S-firma_M_contig9616.20613.1 vs. uniprot
Match: A0A3P8YXQ0_ESOLU (Glycerol-3-phosphate dehydrogenase [NAD(+)] n=3 Tax=Esox lucius TaxID=8010 RepID=A0A3P8YXQ0_ESOLU)

HSP 1 Score: 145 bits (365), Expect = 1.060e-38
Identity = 92/199 (46.23%), Postives = 120/199 (60.30%), Query Frame = 1 
Query:    4 QFLGRVLPTVAEALGLGPSGDGAAPVGRRIRAVSLIKGVDKGPDGLKLISDHIREGL-------FGA-VPLGLADEDYLSCRAEGLSVTSDADTHTLRLLFDRPTFRVTVVRNASATVELCGALKNVVALGAAFCDGLGYGGNTKAAIVRTGLAEMRIFAERLRTDASFDATASSRAFLESCGIGDLMTTCYGASRNRK 576
            QF+GR+   +   +  G  G            +SLIKG+D+GPDGLKLISD IRE L        GA +   +ADE +  C    +   ++A+ H  + L   P FR+TVV+  S TVELCGALKN+VA+GA FCDGLG+G NTKAA++R GL EM  F++        +   +S  FLESCG+ DL+TTCYG  RNRK
Sbjct:  104 QFIGRLCDQMKPHITQGVIG------------ISLIKGIDEGPDGLKLISDIIREKLEIDVSVLMGANIASEVADEKF--CETT-IGAKNEANGHIFKELLQTPNFRITVVQE-SDTVELCGALKNIVAVGAGFCDGLGFGDNTKAAVIRLGLMEMIAFSKMF-----CNGHVTSVTFLESCGVADLITTCYGG-RNRK 280
[Close]
BLAST of mRNA_S-firma_M_contig9616.20613.1 vs. uniprot
Match: A0A8C7RWP0_ONCMY (Glycerol-3-phosphate dehydrogenase [NAD(+)] n=1 Tax=Oncorhynchus mykiss TaxID=8022 RepID=A0A8C7RWP0_ONCMY)

HSP 1 Score: 145 bits (366), Expect = 1.180e-38
Identity = 93/199 (46.73%), Postives = 118/199 (59.30%), Query Frame = 1 
Query:    4 QFLGRVLPTVAEALGLGPSGDGAAPVGRRIRAVSLIKGVDKGPDGLKLISDHIREGL-------FGA-VPLGLADEDYLSCRAEGLSVTSDADTHTLRLLFDRPTFRVTVVRNASATVELCGALKNVVALGAAFCDGLGYGGNTKAAIVRTGLAEMRIFAERLRTDASFDATASSRAFLESCGIGDLMTTCYGASRNRK 576
            QF+GR+   +   +  G  G            +SLIKG+D+GP+GLKLISD IRE L        GA +   +ADE +  C    +   ++A+ H  + L   P FR+TVV+  S TVELCGALKN+VA+GA FCDGLG+G NTKAA++R GL EM  F     T        SS  FLESCG+ DL+TTCYG  RNRK
Sbjct:   96 QFIGRLCDQMKPHIAQGTIG------------ISLIKGIDEGPEGLKLISDIIREKLEIEVSVLMGANIANEVADEKF--CETT-IGAKNEANGHVFKELLQTPNFRITVVQE-SDTVELCGALKNIVAVGAGFCDGLGFGDNTKAAVIRLGLMEMIAF-----TKLFCKGQVSSVTFLESCGVADLITTCYGG-RNRK 272
[Close]
BLAST of mRNA_S-firma_M_contig9616.20613.1 vs. uniprot
Match: A0A3Q3MZH4_9TELE (Glycerol-3-phosphate dehydrogenase [NAD(+)] n=1 Tax=Mastacembelus armatus TaxID=205130 RepID=A0A3Q3MZH4_9TELE)

HSP 1 Score: 145 bits (365), Expect = 1.330e-38
Identity = 87/167 (52.10%), Postives = 108/167 (64.67%), Query Frame = 1 
Query:  100 VSLIKGVDKGPDGLKLISDHIREGL-------FGA-VPLGLADEDYLSCRAEGLSVTSDADTHTLRLLFDRPTFRVTVVRNASATVELCGALKNVVALGAAFCDGLGYGGNTKAAIVRTGLAEMRIFAERLRTDASFDATASSRAFLESCGIGDLMTTCYGASRNRK 576
            +SLIKG+D+GP+GLKLISD IRE L        GA +   +ADE +  C    +   ++A+ H  + L   P FR+TVV   S TVELCGALKN+VA+GA FCDGLG+G NTKAA++R GL EM  FA+            SS  FLESCG+ DL+TTCYG  RNRK
Sbjct:  135 ISLIKGIDEGPEGLKLISDIIREKLEIEVSVLMGANIASEVADEKF--CETT-IGAKNEANGHLFKELLQTPNFRITVVHE-SDTVELCGALKNIVAVGAGFCDGLGFGDNTKAAVIRLGLMEMVAFAKLF-----CKGQVSSSTFLESCGVADLITTCYGG-RNRK 291
[Close]
BLAST of mRNA_S-firma_M_contig9616.20613.1 vs. uniprot
Match: A0A1S3MRP2_SALSA (Glycerol-3-phosphate dehydrogenase [NAD(+)] n=29 Tax=Euteleosteomorpha TaxID=1489388 RepID=A0A1S3MRP2_SALSA)

HSP 1 Score: 144 bits (363), Expect = 1.760e-38
Identity = 93/199 (46.73%), Postives = 118/199 (59.30%), Query Frame = 1 
Query:    4 QFLGRVLPTVAEALGLGPSGDGAAPVGRRIRAVSLIKGVDKGPDGLKLISDHIREGL-------FGA-VPLGLADEDYLSCRAEGLSVTSDADTHTLRLLFDRPTFRVTVVRNASATVELCGALKNVVALGAAFCDGLGYGGNTKAAIVRTGLAEMRIFAERLRTDASFDATASSRAFLESCGIGDLMTTCYGASRNRK 576
            QF+GR+   +   +  G  G            +SLIKG+D+GP+GLKLISD IRE L        GA +   +ADE +  C    +   ++A+ H  + L   P FR+TVV+  S TVELCGALKN+VA+GA FCDGLG+G NTKAA++R GL EM  F     T        SS  FLESCG+ DL+TTCYG  RNRK
Sbjct:   96 QFIGRLCDQMKPHITQGTIG------------ISLIKGIDEGPEGLKLISDIIREKLEIEVSVLMGANIANEVADEKF--CETT-IGAKNEANGHIFKELLQTPNFRITVVQE-SDTVELCGALKNIVAVGAGFCDGLGFGDNTKAAVIRLGLMEMIAF-----TKLFCKGQVSSVTFLESCGVADLITTCYGG-RNRK 272
[Close]
BLAST of mRNA_S-firma_M_contig9616.20613.1 vs. uniprot
Match: G3PPY2_GASAC (Glycerol-3-phosphate dehydrogenase [NAD(+)] n=3 Tax=Percomorphaceae TaxID=1489872 RepID=G3PPY2_GASAC)

HSP 1 Score: 144 bits (362), Expect = 3.460e-38
Identity = 87/167 (52.10%), Postives = 107/167 (64.07%), Query Frame = 1 
Query:  100 VSLIKGVDKGPDGLKLISDHIREGL-------FGA-VPLGLADEDYLSCRAEGLSVTSDADTHTLRLLFDRPTFRVTVVRNASATVELCGALKNVVALGAAFCDGLGYGGNTKAAIVRTGLAEMRIFAERLRTDASFDATASSRAFLESCGIGDLMTTCYGASRNRK 576
            +SLIKG+D+GPDGLKLISD IRE L        GA +   +ADE +           ++A+    + L   P FR+TVV + S TVELCGALKN+VA+GA FCDGLG+G NTKAA++R GL EM  FA+   T        SS  FLESCG+ DL+TTCYG  RNRK
Sbjct:  130 ISLIKGIDEGPDGLKLISDIIREKLEIEVSVLMGANIASEVADEKFCETTIAA-GARNEANGLIFKELLQTPNFRITVV-DESDTVELCGALKNIVAVGAGFCDGLGFGDNTKAAVIRLGLMEMVAFAKMFCT-----GQVSSTTFLESCGVADLITTCYGG-RNRK 288
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig9616.20613.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FUR6_ECTSI1.250e-11090.72Glycerol-3-phosphate dehydrogenase [NAD(+)] n=1 Ta... [more]
A0A6H5JZY6_9PHAE1.040e-10581.48Glycerol-3-phosphate dehydrogenase [NAD(+)] n=1 Ta... [more]
A0A3Q3KGG7_MONAL7.500e-4155.09Glycerol-3-phosphate dehydrogenase [NAD(+)] n=2 Ta... [more]
A0A665WHH0_ECHNA2.380e-3953.29Glycerol-3-phosphate dehydrogenase [NAD(+)] n=46 T... [more]
A0A8C4IU65_DICLA3.670e-3953.29Glycerol-3-phosphate dehydrogenase [NAD(+)] n=1 Ta... [more]
A0A3P8YXQ0_ESOLU1.060e-3846.23Glycerol-3-phosphate dehydrogenase [NAD(+)] n=3 Ta... [more]
A0A8C7RWP0_ONCMY1.180e-3846.73Glycerol-3-phosphate dehydrogenase [NAD(+)] n=1 Ta... [more]
A0A3Q3MZH4_9TELE1.330e-3852.10Glycerol-3-phosphate dehydrogenase [NAD(+)] n=1 Ta... [more]
A0A1S3MRP2_SALSA1.760e-3846.73Glycerol-3-phosphate dehydrogenase [NAD(+)] n=29 T... [more]
G3PPY2_GASAC3.460e-3852.10Glycerol-3-phosphate dehydrogenase [NAD(+)] n=3 Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig9616contigS-firma_M_contig9616:420..3743 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-19
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Properties
Property NameValue
Taxonomic scopeMetazoa
Seed ortholog score144.8
Seed ortholog evalue4.1e-32
Seed eggNOG ortholog8010.XP_010888520.1
Preferred nameGpdh
KEGG rclassRC00029
KEGG koko:K00006
KEGG ReactionR00842
KEGG Pathwayko00564,ko01110,ko04011,map00564,map01110,map04011
GOsGO:0003674,GO:0003824,GO:0004367,GO:0004368,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006066,GO:0006067,GO:0006629,GO:0006638,GO:0006639,GO:0006641,GO:0006950,GO:0006970,GO:0006972,GO:0006973,GO:0007610,GO:0007626,GO:0007629,GO:0008150,GO:0008152,GO:0008344,GO:0009628,GO:0009987,GO:0016491,GO:0016614,GO:0016616,GO:0016901,GO:0016999,GO:0017144,GO:0019725,GO:0030016,GO:0030017,GO:0030018,GO:0030534,GO:0031430,GO:0031672,GO:0031674,GO:0032501,GO:0033554,GO:0034308,GO:0036296,GO:0042592,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043292,GO:0044237,GO:0044238,GO:0044255,GO:0044281,GO:0044422,GO:0044424,GO:0044444,GO:0044449,GO:0044464,GO:0046486,GO:0050896,GO:0051716,GO:0055093,GO:0055114,GO:0065007,GO:0065008,GO:0070482,GO:0071214,GO:0071470,GO:0071474,GO:0071704,GO:0099080,GO:0099081,GO:0099512,GO:0104004,GO:1901615
EggNOG free text desc.Glycerol-3-phosphate dehydrogenase 1c
EggNOG OGs38E7F@33154,3BCI8@33208,3CVH2@33213,47ZP4@7711,48VII@7742,4A0Q0@7898,COG0240@1,KOG2711@2759
EC1.1.1.8
COG Functional cat.C
Best tax levelActinopterygii
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Hectar predicted targeting categoryother localisation
Exons5
Model size579
Cds size579
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig9616.20613.1prot_S-firma_M_contig9616.20613.1Sphaerotrichia firma Sfir_13m malepolypeptideS-firma_M_contig9616 420..3743 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622828797.8683474-CDS-S-firma_M_contig9616:419..5341622828797.8683474-CDS-S-firma_M_contig9616:419..534Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig9616 420..534 -
1697105168.8567228-CDS-S-firma_M_contig9616:419..5341697105168.8567228-CDS-S-firma_M_contig9616:419..534Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig9616 420..534 -
1622828797.8809657-CDS-S-firma_M_contig9616:1208..13661622828797.8809657-CDS-S-firma_M_contig9616:1208..1366Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig9616 1209..1366 -
1697105168.870845-CDS-S-firma_M_contig9616:1208..13661697105168.870845-CDS-S-firma_M_contig9616:1208..1366Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig9616 1209..1366 -
1622828797.8926585-CDS-S-firma_M_contig9616:2085..22021622828797.8926585-CDS-S-firma_M_contig9616:2085..2202Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig9616 2086..2202 -
1697105168.8802996-CDS-S-firma_M_contig9616:2085..22021697105168.8802996-CDS-S-firma_M_contig9616:2085..2202Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig9616 2086..2202 -
1622828797.904668-CDS-S-firma_M_contig9616:3025..31251622828797.904668-CDS-S-firma_M_contig9616:3025..3125Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig9616 3026..3125 -
1697105168.8920557-CDS-S-firma_M_contig9616:3025..31251697105168.8920557-CDS-S-firma_M_contig9616:3025..3125Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig9616 3026..3125 -
1622828797.9204314-CDS-S-firma_M_contig9616:3654..37431622828797.9204314-CDS-S-firma_M_contig9616:3654..3743Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig9616 3655..3743 -
1697105168.9002314-CDS-S-firma_M_contig9616:3654..37431697105168.9002314-CDS-S-firma_M_contig9616:3654..3743Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig9616 3655..3743 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-firma_M_contig9616.20613.1

>prot_S-firma_M_contig9616.20613.1 ID=prot_S-firma_M_contig9616.20613.1|Name=mRNA_S-firma_M_contig9616.20613.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=193bp
MQFLGRVLPTVAEALGLGPSGDGAAPVGRRIRAVSLIKGVDKGPDGLKLI
SDHIREGLFGAVPLGLADEDYLSCRAEGLSVTSDADTHTLRLLFDRPTFR
VTVVRNASATVELCGALKNVVALGAAFCDGLGYGGNTKAAIVRTGLAEMR
IFAERLRTDASFDATASSRAFLESCGIGDLMTTCYGASRNRK*
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mRNA from alignment at S-firma_M_contig9616:420..3743-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-firma_M_contig9616.20613.1 ID=mRNA_S-firma_M_contig9616.20613.1|Name=mRNA_S-firma_M_contig9616.20613.1|organism=Sphaerotrichia firma Sfir_13m male|type=mRNA|length=3324bp|location=Sequence derived from alignment at S-firma_M_contig9616:420..3743- (Sphaerotrichia firma Sfir_13m male)
ATGCAGTTCCTCGGACGAGTGCTGCCGACGGTGGCGGAGGCGTTGGGGCT
CGGTCCGAGCGGAGACGGCGCGGCGCCGGTGGGGCGAAGGTGTGTGTGGG
GCATGAAACACCGGTGCACACAATTAGCGGCGATGTATATATATAGTAGA
GAGCAGGCGCTCGCCCGCTGTGAAACCACGGGAGTGGAGGTATTGGCGGT
TGGCTGTTGGCGACGGCAGTGGTGCATCGAGCTAGAGCGGATCCTAACGT
GGTCGTTTTCTGCTGTGGTGTGCAGTGTGGTGCAGCCGTGTACGATATGC
ACCAAGCGGCTGCTGTTTCGGCCATGAGCACCGGCAACCACGACCATAAC
CACCACCACCACCGTAAGCACAACTACGACAGCACCAACAGCCTTCAACC
CATTGCGGCACCCAGCTTTGATTTTGTTCAAGCTTCGGTTGAGTAGACCG
ATCGACTACCCGAATCACACGACCCGATGACCGAATGAACCAATCTAATC
GAATCTATTCGAATCGAATCAAATCAAACTAAGTCAAAATCAGGATCCGA
GCGCTGTCATTGATAATAAAAAATCCAATCCAATCGAATCGAATCGAATC
GAATCCAATCGAGTTCAGGATCCGAGCGGTGTCCTTGATCAAGGGGGTGG
ACAAGGGTCCCGACGGGCTGAAGCTCATCTCCGACCACATCCGCGAGGGG
CTGTTCGGCGCCGTGCCGGTGAGCGTGCTGATGGGCGCCAACGTGGCCAA
CGAGGTGGCCCGCGACGAGCTCTGCGAGTCCACGGTGAGCAGCAGACAGA
CATGGTAGACAGACAGATAGATAGATAGATAGATAGACATGTAGATAGAT
AGATAGATAAATAGATAGAAAGATAGATATATAGATGGACAGATAGACAG
GCAGACAGACAAACAGACAGACATGCAGGTAGGACAGACAGACAGACAGA
CACGCAAACACGCAAGTAGGATAGCACCCAAGGAATATATCTAGGCAGGA
AGAGAAAAGCGCCGAGACAGACAGACAGAGACGGACGAAGAAGGCTGCAA
CATACCACTGGCTGTTTACTACGAAGTTTTTGATACCGTCTGGCCGAAAC
ACCAAGGGTCTTTTGTCATTTTGTCATTTTGTCATTTTGTCATTTTGTCG
TTTTGTCATTTTGTCATTTTGTCGCGTGCCCGGTGTTCTTTTGGGCGGTT
TTTCCTTCCAAGCTTTAGCCACCGCCGCCCACCCATCCCCGATTGTGTAC
GCTAAGCCAACCGCTCCTCATTGTGATTGTGCCGTTTCTGGTGTCCTTCT
CCGCTCGGTTCGTTTTTGTGAAAATTTCTACATACATATATACACGTCAG
CCGTGTACGTCCGACCTGTGAACAAGCCGTTCCGCCGAAACCGCCCTGTT
CTTGCCCTGATTTGGTCTCATCTGGTGTGTCGTTCTGCCTTTGTGTTTGT
TGTGTTGTGAAGCTGATCTGATCTGATCTGATCTGATCTAATCTGGTGTG
TCGTTCTGCCTTTGCGTTGTGTTGTGTTCCGAATCCTGAAGCTCGGCCTC
GCGGACGAGGACTACCTGTCCTGCAGGGCCGAAGGCCTCTCGGTCACGTC
GGATGCCGACACCCACACCCTCAGGCTGCTCTTCGACCGCCCCACCTTCC
GGGTAACGGTGAGCATTGTGTGCCGGGGGGGGGAGTGAGGGTGGAGATAG
AGACAGAGAGGTGGTAGGTAGGCCGAGAGATTACTACTCTGTAGGGAGGA
AGAGACGAAAGGCGGGCTTTGAAGGACTCGTTTGGTTGTTGCGGCGGAGC
TTCCGGAAGGACAACAAGGCAAAATTGCGCGCAGATTCGCTGCTGCTGCT
GCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCGTTCCG
ACGCCAGGAAAGGAAAACGCACACTGCGGCATTCCGCGAGACGAGACGAG
CAGAAGGGACAGAACTCCGGGAAAGAGCGTAGGAGGTGTTTAGGGCGCGC
ACGGAAATATACTCCGAGTATTCATCATGCGTGCTCATCATGCGTGCCTT
GTGTGTGCACACGCGTCACAGACAGGCGTTGGTCGATACCTCTGCTACTG
CTTCGCAAGGCTTCCTGAAAGGACTAGACCGCCCCTCGCTCGCCCTCATT
CTAGCCCTGTCATTCTTCTGGAAACTTGCCGCCGTTGCTCGCCCTTCTAG
CTAGGTCGCCCCCCCTCCCGCAGGAACAACCGTGGCAATCACAATCACGC
CCCCGCACCCCTCGTTCCCTTGAAGGCGTTTCGCGCACCTCCCCTCCAAG
CCACCCGTGTTCCATGGCCAAACCCCCTTTTCTCCCCCCGTGTTTGTGGT
TTGTTTCGGCCTTTCTTTCGCCTGCAGGTGGTACGAAACGCCTCCGCGAC
GGTGGAGCTTTGCGGCGCGCTGAAGAACGTGGTGGCGCTGGGGGCGGCGT
TCTGTGACGGGCTGGGGTACGGGGGCAACACCAAGGCGGCGATCGTCCGC
ACGGGGCTCGCGGAAATGCGCATCTTTGCCGAGAGGTACGATACGTACTT
GCATGATATGTATGTACTTTATGAAGAAGTGGAAGGGTACAGCAGTGCGT
TTGCGCGACGAAGTGGTGTTGTTTTTTGGTGGTGGTGGTGGTGGTGGTGG
TGGTGGTGGTGTGGGCGTGTGTAGGCGTGGGCGTGTCCGTGGCTTCTTGG
CGGTTGTTGATCTGCATGCACCACACTATGGTATTTGATAGCTAGCCGGC
GCGGTAAGCGGTGTGCGGCAGGTTTTTCGTCTGTGCAGGCCTCGAGCTTG
AGCAGATGGAGGGAGGTAGAGGAGGATCTGTGCGTAATACAAGGAGCGTT
TTCTGGAAAAATCGAACTTGAATAGCGCCCCCAACAGGTGGCTGTGGGGC
CTCTATTTTTTATTTATTTTTTCTCCCCCCGTTAGTGTATTCTGTCGTCT
GCCCCACTGGCCCCCATCCTCCACTACGACTAGCTAGACGACCCACCTGG
GGTCACACAGGAGGGGAGGGGTTGGACCCCCTCCTACGGACCTCTATTTA
CTAGGGCCAGGAAGACTGCTTCGTGGCGAAAGTCGGCCGTGCTGCAAACG
CTGATCACACACCTTCTTCACCGACGCGACGGTACAACTTTTTTTTTTTT
TTTTTTTCTTTTTTCTAATTTCTTTTTTCTTGTTTCGTTTATTCTCTTGG
TGCGTGTAGGTTGCGGACGGATGCCAGCTTCGATGCGACGGCATCGTCGA
GGGCTTTCCTGGAGAGCTGCGGGATCGGGGACCTGATGACCACGTGCTAT
GGGGCCAGCCGAAACAGAAAGTGA
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Coding sequence (CDS) from alignment at S-firma_M_contig9616:420..3743-

>mRNA_S-firma_M_contig9616.20613.1 ID=mRNA_S-firma_M_contig9616.20613.1|Name=mRNA_S-firma_M_contig9616.20613.1|organism=Sphaerotrichia firma Sfir_13m male|type=CDS|length=1158bp|location=Sequence derived from alignment at S-firma_M_contig9616:420..3743- (Sphaerotrichia firma Sfir_13m male)
ATGCAGTTCCTCGGACGAGTGCTGCCGACGGTGGCGGAGGCGTTGGGGCT
CGGTCCGAGCGGAGACGGCGCGGCGCCGGTGGGGCGAAGATGCAGTTCCT
CGGACGAGTGCTGCCGACGGTGGCGGAGGCGTTGGGGCTCGGTCCGAGCG
GAGACGGCGCGGCGCCGGTGGGGCGAAGGATCCGAGCGGTGTCCTTGATC
AAGGGGGTGGACAAGGGTCCCGACGGGCTGAAGCTCATCTCCGACCACAT
CCGCGAGGGGCTGTTCGGCGCCGTGCCGGATCCGAGCGGTGTCCTTGATC
AAGGGGGTGGACAAGGGTCCCGACGGGCTGAAGCTCATCTCCGACCACAT
CCGCGAGGGGCTGTTCGGCGCCGTGCCGCTCGGCCTCGCGGACGAGGACT
ACCTGTCCTGCAGGGCCGAAGGCCTCTCGGTCACGTCGGATGCCGACACC
CACACCCTCAGGCTGCTCTTCGACCGCCCCACCTTCCGGGTAACGCTCGG
CCTCGCGGACGAGGACTACCTGTCCTGCAGGGCCGAAGGCCTCTCGGTCA
CGTCGGATGCCGACACCCACACCCTCAGGCTGCTCTTCGACCGCCCCACC
TTCCGGGTAACGGTGGTACGAAACGCCTCCGCGACGGTGGAGCTTTGCGG
CGCGCTGAAGAACGTGGTGGCGCTGGGGGCGGCGTTCTGTGACGGGCTGG
GGTACGGGGGCAACACCAAGGCGGCGATCGTCCGCACGGGGCTCGCGGAA
ATGCGCATCTTTGCCGAGAGGTGGTACGAAACGCCTCCGCGACGGTGGAG
CTTTGCGGCGCGCTGAAGAACGTGGTGGCGCTGGGGGCGGCGTTCTGTGA
CGGGCTGGGGTACGGGGGCAACACCAAGGCGGCGATCGTCCGCACGGGGC
TCGCGGAAATGCGCATCTTTGCCGAGAGGTTGCGGACGGATGCCAGCTTC
GATGCGACGGCATCGTCGAGGGCTTTCCTGGAGAGCTGCGGGATCGGGGA
CCTGATGACCACGTGCTATGGGGCCAGCCGAAACAGAAAGTGAGTTGCGG
ACGGATGCCAGCTTCGATGCGACGGCATCGTCGAGGGCTTTCCTGGAGAG
CTGCGGGATCGGGGACCTGATGACCACGTGCTATGGGGCCAGCCGAAACA
GAAAGTGA
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