mRNA_S-firma_M_contig96.20591.1 (mRNA) Sphaerotrichia firma Sfir_13m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-firma_M_contig96.20591.1
Unique NamemRNA_S-firma_M_contig96.20591.1
TypemRNA
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Homology
BLAST of mRNA_S-firma_M_contig96.20591.1 vs. uniprot
Match: A0A6H5JKZ2_9PHAE (DLH domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JKZ2_9PHAE)

HSP 1 Score: 476 bits (1225), Expect = 3.310e-163
Identity = 261/379 (68.87%), Postives = 286/379 (75.46%), Query Frame = 2
Query:  107 MRRGLGLVAALTLAAPSVRGWLCARGPHRGGVRVTP----TRMASSHTKAINVQELWPHLAGKQTSASNAAGKVIREAWA-----KDINGGVGAGDVSSSSSSPSAWNIRHSVVDYKDDGGITLQGLYARPGGDGLPDRLPGVIVAHTAVGPQEDMILWKLDAIARLGYAAFALDMFGTGRALWDRAESLAARRPITEDRSLMQARAMSAVRTLGQMEGVDQERLAAVGYCFGGMAVLDLARMVPPDAGGDDDNTSALPRLKAVASLHGILAPISPGAGCK-----VPDDAPVGVPRVLVLHATADPFVPPEQVQAMEAEFSRRGANLEVVRYGGEALHAFTRPEKTGQADKDAGLSYCKHADADSWRRVVHLLREELS 1201
            M RGL    AL    PS RGW  A  P   G   TP     R+ S   K I+V ++WP LAGK+T A+ AAGKVIR AWA      D   G GA      SSS ++W+IR SVV+Y D G   LQGLY RP G+GLPDRLPGVI+AHTAVGPQEDMILWKLD IA LGYAAFALDMFGTGRALW+RAESLAARRPITEDRSLMQARA +AVRTL QMEG+D+ERLAAVGYCFGGM VLDLARMV PD  GDD   +  PRLKAVASLHGILAPISPG G +       DDA + VPRVLVLHATADPFVPPEQV+AME E SRRGA LEVVRYGG A+HAFTRPEKT Q D+DAGLSYCK+A+ DSWRRVV LLREE +
Sbjct:    1 MCRGLAQFVALVSVLPSARGWQFALSPRFAGK--TPGTRLRRVQSMDMKMISVDDIWPQLAGKETCANEAAGKVIRAAWAVATTNPDTTNGRGA------SSSSASWSIRRSVVEYND-GDTALQGLYTRPEGEGLPDRLPGVILAHTAVGPQEDMILWKLDQIALLGYAAFALDMFGTGRALWNRAESLAARRPITEDRSLMQARATAAVRTLSQMEGIDEERLAAVGYCFGGMTVLDLARMVRPD--GDDAGANTPPRLKAVASLHGILAPISPGTGGEDGAGLAADDAALAVPRVLVLHATADPFVPPEQVRAMEEELSRRGARLEVVRYGGSAMHAFTRPEKTSQVDRDAGLSYCKYAEEDSWRRVVELLREEFA 368          
BLAST of mRNA_S-firma_M_contig96.20591.1 vs. uniprot
Match: A0A836CLU0_9STRA (Dienelactone hydrolase family protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLU0_9STRA)

HSP 1 Score: 211 bits (536), Expect = 9.190e-61
Identity = 132/315 (41.90%), Postives = 169/315 (53.65%), Query Frame = 2
Query:  251 VQELWPHLAGKQTSASNAAGKVIREAWAKDINGGVGAGDVSSSSSSPSAWNIRHSVVDYKDDGGITLQGLYARPGGDGLPDRLPGVIVAHTAVGPQEDMILWKLDAIARLGYAAFALDMFGTGRALWDRAESLAARRPITEDRSLMQARAMSAVRTLGQMEGVDQERLAAVGYCFGGMAVLDLARMVPPDAGGDDDNTSALPRLKAVASLHGILAPISPGAGCKVPDDAPVGVPRVLVLHATADPFVPPEQVQAMEAEFSRRGAN-LEVVRYGGEALHAFTRPEKTGQADKDAGLSYCKHADADSWRRVVHLLRE 1192
            + + WP L G +TSAS  A  ++   W              S       ++++  +V Y D  G+ LQG   RP      + LP V+VAHTAVG Q+D++L  LD +A LGY AF LDMFG G+A+WDR +SLAAR P+T DRSL+  RA +A+    Q+ GVD  R+A VGYCFGG+  LD  R     AG           + A  + HGILAP  P            G  RVLVLH  ADPFVPP+QV+A EAE +  G     V+ Y G A HAFTRPEK   +D+ AGL Y   A    W  +   L +
Sbjct:    2 IDKCWPQLTGLRTSASAEAAAILNNRW--------------SQFELERLFDLQRQIVPYIDHTGLPLQGFVVRPAAQAA-ESLPCVLVAHTAVGIQDDLLLQILDGVAGLGYVAFGLDMFGAGQAVWDREQSLAARAPLTSDRSLLARRAEAALHCATQLRGVDARRVAVVGYCFGGIVALDTVR-----AGCG---------IAAAITFHGILAPPPPDQDLSWCKHYSTGC-RVLVLHGGADPFVPPDQVRAFEAEMAAAGVQQCSVIVYDG-ARHAFTRPEKVLDSDRSAGLFYDAAAAEAGWAAMRGCLEQ 285          
BLAST of mRNA_S-firma_M_contig96.20591.1 vs. uniprot
Match: A0A7S1HA30_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1HA30_HEMAN)

HSP 1 Score: 181 bits (458), Expect = 1.910e-50
Identity = 108/218 (49.54%), Postives = 131/218 (60.09%), Query Frame = 2
Query:  539 EDMILWKLDAIARLGYAAFALDMFGTGRALWDRAESLAARRPITEDRSLMQARAMSAVRTLGQMEGVDQERLAAVGYCFGGMAVLDLARMVPPDAGGDDDNTSALPR-LKAVASLHGILAPISPGAGCKVPDDAPVGVPRVLVLHATADPFVPPEQVQAMEAEFSRRGA-NLEVVRYGGEALHAFTRPEKTGQADKDAGLSYCKHADADSWRRVVHLL 1186
            ED + WKLD +A  GY AF +DMFG GRALWD+ E+LAAR+P+ EDRS M  R M A  T   ME  D  R+ A+GYCFGGMAVLDLAR             S LP+ LKA  SLHGIL  +        P    VG  +VLV H  +DPFV PE ++  E++ + R A +L +  Y G + HAFTRPEKT + D  AGL YC+ ADA SW     LL
Sbjct:    1 EDFMFWKLDKLASQGYLAFGVDMFGAGRALWDKEEALAARKPLREDRSQMIERMMCAYETACSMEVADSARVGAIGYCFGGMAVLDLAR-------------SGLPKSLKATVSLHGILDRLD------TPPTDVVG--KVLVCHGGSDPFVTPEMLRDFESDMAARNAEDLHIHTYSG-SKHAFTRPEKTTEGDSAAGLYYCELADAASWAAASALL 196          
BLAST of mRNA_S-firma_M_contig96.20591.1 vs. uniprot
Match: A0A7S0HUL7_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0HUL7_9CRYP)

HSP 1 Score: 179 bits (455), Expect = 5.610e-49
Identity = 124/310 (40.00%), Postives = 160/310 (51.61%), Query Frame = 2
Query:  284 QTSASNAAGKVIREAWAKDINGGVGAGDVSSSSSSPSAWNIRHSVVDYKDDGGITLQGLYARPGGDGLPDRLPGVIVAHTAVGPQEDMILWKLDAIARLGYAAFALDMFGTGRALWDRAESLAARRPITEDRSLMQARAMSAVRTLGQMEGVDQERLAAVGYCFGGMAVLDLARMVPPDAGGDDDNTSALPRLKAVASLHGILAPISPGAGCKVPDD-----APVGVPRVLVLHATADPFVPPEQVQAMEAEFSRRGANLEVVRYGGEALHAFTRPEKTGQADKDAGLSYCKHADADSWRRVVHLLREEL 1198
            +TS ++ AG+ I+ AW  D        D+           ++ S V Y + GG  L G    P  D    ++P V++ HTAVG QED + WKL+A+A LG+ AF  DMFGTGRALWDR E+L ARR +  DR  M  R  +A  T+  +  VD     A+G+CFGGMAVLDLAR            +  +P L+A  S HGIL          +PDD      PV    +LV H   DPFV  E +         R +N  +  Y G A HAFTRPEKT  +D  AGL Y + AD DS  R+  +LR  L
Sbjct:    8 RTSYNDEAGRKIQAAWRDDA-------DILQCK-----HQLKKSSVSYSE-GGRELMGEACWP--DVGNQKMPAVLLVHTAVGLQEDFMRWKLEAVASLGFVAFGADMFGTGRALWDREEALEARRELVCDRRRMIDRVKAAATTMMSLPQVDPRGFGALGFCFGGMAVLDLAR------------SGCMPNLEATVSFHGILDDPD------LPDDYGGREGPVPG-EILVCHGEDDPFVSSENLNLFLENLKLRKSNFHLQAYPG-AKHAFTRPEKTEPSDFSAGLFYNEQADRDSSERMKGMLRRRL 282          
BLAST of mRNA_S-firma_M_contig96.20591.1 vs. uniprot
Match: A0A0G4EJ35_VITBC (DLH domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EJ35_VITBC)

HSP 1 Score: 166 bits (421), Expect = 6.970e-44
Identity = 105/270 (38.89%), Postives = 147/270 (54.44%), Query Frame = 2
Query:  398 WNIRHSVVDYKDDGGITLQGLYARPGGDGLPDRL----PGVIVAHTAVGPQEDMILWKLDAIARLGYAAFALDMFGTGRALWDRAESLAARRPITEDRSLMQARAMSAVRTLGQMEGVDQERLAAVGYCFGGMAVLDLARMVPPDAGGDDDNTSALPRLKAVASLHGILAPISPGAGCKVPDDAPVGVP-RVLVLHATADPFVPPEQVQAMEAEFSRRGANLEVVRYGGEALHAFTRPEKTGQADKDAGLSYCKHADADSWRRVVHLLRE 1192
            W  + + V Y+D+G   L GL      D    ++    P V+V  TAVG +ED +   LD  A LGY AF +DM+G G A+WD+  S A R+P+T DR+ +Q R ++A +    +  V ++ +A VGYCFGGM  LDLAR   P              +K V S HG+L    P       D  P G+   VLV H + DPF+ P+Q QA + E S +  + ++  YGG A H+FTRPEK  QAD+DAGL YC  ++  S+R     L++
Sbjct:   42 WTYKQTDVAYQDEG-TELMGLAVWVERDDASRQILGERPCVLVCPTAVGLREDFLFGALDRYASLGYVAFGVDMYGEG-AVWDKGRSRAIRQPLTADRTKLQRRMVAAYQAAQSLPQVQEDNIAVVGYCFGGMCALDLARAGVP--------------MKGVVSFHGVLD--RPAV-----DKVPGGLSCPVLVHHGSDDPFISPDQFQAFQQELSDQRTDWQIHIYGG-AKHSFTRPEKVTQADRDAGLQYCPKSERRSYRTTKAFLQD 287          
BLAST of mRNA_S-firma_M_contig96.20591.1 vs. uniprot
Match: A0A7S2XY83_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XY83_9STRA)

HSP 1 Score: 166 bits (420), Expect = 3.630e-43
Identity = 111/300 (37.00%), Postives = 150/300 (50.00%), Query Frame = 2
Query:  251 VQELWPHLAGKQTSASNAAGKVIREAWAKDINGGVGAGDVSSSSSSPSAWNIRHSVVDYKDDGGITLQGLYARP--------GGDGLPDRLPGVIVAHTAVGPQEDMILWKLDAIARLGYAAFALDMFGT------GRALWDRAESLAARRPITEDRSLMQARAMSAVRTLGQMEGVDQERLAAVGYCFGGMAVLDLARMVPPDAGGDDDNTSALPRLKAVASLHGILAPISPGAGCKVPDDAPVGVPR--VLVLHATADPFVPPEQVQAMEAEFSRRGANLEVVRYGGEALHAFTRPEK 1102
            ++ LW      +TSAS    +V++ A+  D++   G             + IR + + Y D     L GL A P        G   LP +LPGV+VAHTAVG  +D ILWKL+AIA LGYAAFALDM+G           WDRA +   RR + EDR   QARA +          VD+ R+AA+GYC+GGM VLDLA+   P              LK V ++HGIL          VP +    + +  V + H  ADPFV  EQ+ A + + ++   +  +  + G   HAFTRPEK
Sbjct:   54 LKTLWDFTGDFKTSASEPEAQVLQNAYENDLDVAHG---------HEQGYTIRRTKIPYSDSTQARLSGLLAWPVQDPLPPAGAPALPPKLPGVLVAHTAVGNGDDFILWKLEAIASLGYAAFALDMYGEEASGAHNEGAWDRAVNAEVRRSLREDRLSQQARARAGYEVFASQPMVDESRMAALGYCYGGMVVLDLAKSGVP--------------LKGVGTMHGIL---------DVPKELDTSLIQCPVQLYHGKADPFVSQEQLVAFQEDMNKNDISWNIHSFPGIG-HAFTRPEK 320          
BLAST of mRNA_S-firma_M_contig96.20591.1 vs. uniprot
Match: A0A7S1J2W1_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1J2W1_9EUGL)

HSP 1 Score: 154 bits (389), Expect = 2.070e-40
Identity = 98/221 (44.34%), Postives = 124/221 (56.11%), Query Frame = 2
Query:  563 DAIARLGYAAFALDMFGTGRALWDRAESLAARRPITEDRSLMQARAMSAV---------RTLGQMEGVDQERLAAVGYCFGGMAVLDLARMVPPDAGGDDDNTSALPRLKAVASLHGILAPISPGAGCKVPDDAPVGVPRVLVLHATADPFVPPEQVQAMEAEFSRRGANLEVVRYGGEALHAFTRPEKTGQADKDAGLSYCKHADADSWRRVVHLLREEL 1198
            +A+A LGY AFA+DM G GRALWD AE+  AR P+ EDR L+++R  +A+         + LG    +D +R+AAVGYCFGG+ VLDLAR                P L+ V S HGIL     G G   P+   +  PR+LV +  ADPFVPP++ +   AE  RR A LE V + G A H FTRPEK   AD  AG  Y   ADA SW  +   L + L
Sbjct:    1 EALASLGYVAFAVDMLGAGRALWDGAEAKTARAPLYEDRRLLRSRMQAALTAASADSFAQALGPNVALDLDRVAAVGYCFGGLCVLDLAR-------------GNAPGLRGVVSFHGILD----GGGLPDPETDALR-PRILVHNGDADPFVPPDKREQFLAEMGRRHAPLEFVSHPG-ARHGFTRPEKVQPADFAAGFGYDPQADAASWGSMKAFLADVL 202          
BLAST of mRNA_S-firma_M_contig96.20591.1 vs. uniprot
Match: A0A554WZ33_9BURK (Dienelactone hydrolase family protein n=2 Tax=Tepidimonas taiwanensis TaxID=307486 RepID=A0A554WZ33_9BURK)

HSP 1 Score: 151 bits (382), Expect = 5.730e-39
Identity = 106/269 (39.41%), Postives = 139/269 (51.67%), Query Frame = 2
Query:  401 NIRHSVVDYKDDGGITLQGLYARPGGDGLPDRLPGVIVAHTAVGPQ--EDMILWKLDAIARLGYAAFALDMFGTGRALWDRAESLAARRPITEDRSLMQARAMSAVRTLGQMEGVDQERLAAVGYCFGGMAVLDLARMVPPDAGGDDDNTSALPRLKAVASLHGILAPISPGAGCKVPDDAPVGVPRVLVLHATADPFVPPEQVQAMEAEFSRRGANLEVVRYGGEALHAFTRPEKTGQADKDAGLSYCKHADADSWRRVVHLLREELS 1201
            +I+   ++Y  DG +T +GL A    D      PGV VAH   G    ED    K  A+A  GY  FA+D++G GR    R E+ A   P+ +DR+L+QAR  +A++ L     VD +RLAA+G+CFGG++VLD+AR   P              LK V S HG+  P    AG ++  DA     RVL LH   DP   PE V A   E S  GA+ ++  YGG  +HAFT PE     D D G  Y   ADA SWR +   L E L+
Sbjct:    2 SIQTRTIEYTHDG-VTFEGLLAWD--DAHAGPRPGVAVAHAWAGRSAFED---GKARALAERGYVGFAMDVYGKGRRGRTREENAALMTPLVQDRALLQARLGAALQALAAQPEVDAQRLAAIGFCFGGLSVLDMARCGLP--------------LKGVVSFHGLFTPPGNTAGRRI--DA-----RVLALHGWDDPMAKPEAVLAFAQEMSAAGADWQLHAYGG-TMHAFTNPEAN---DPDFGTVYSARADARSWRAMHDFLTEVLA 239          
BLAST of mRNA_S-firma_M_contig96.20591.1 vs. uniprot
Match: A0A2N6CHN5_9GAMM (Carboxymethylenebutenolidase n=1 Tax=Chromatiales bacterium TaxID=2026725 RepID=A0A2N6CHN5_9GAMM)

HSP 1 Score: 149 bits (377), Expect = 1.750e-38
Identity = 101/236 (42.80%), Postives = 132/236 (55.93%), Query Frame = 2
Query:  497 LPGVIVAHTAVGPQEDMILWKLDAIARLGYAAFALDMFGTGRALWDRAESLAARRPITEDRSLMQARAMSAVRTLGQMEGVDQERLAAVGYCFGGMAVLDLARMVPPDAGGDDDNTSALPRLKAVASLHGILAPISPGAGCKVPDDAPVGVP-RVLVLHATADPFVPPEQVQAMEAEFSRRGANLEVVRYGGEALHAFTRPEKTGQADKDAGLSYCKHADADSWRRVVHLLREELS 1201
            LPGV++AH A G + D    K  A+A LGY  FALDM+G GR   +  E+ A  +P  E+RSL+QAR  +A+     +  VD  R+AA+G+CFGGM VLDLAR     +G D         L+AV S HG+L   +PG      +   V +P RVLVLH   DP VP +QV A++ E S  GA+ +V  YG   +HAFT P     AD D G  Y   AD  SWR +   L + L+
Sbjct:   12 LPGVMIAH-AWGGEGDFENGKARALAELGYVGFALDMYGKGRRGGNPDENAALMQPFVENRSLLQARIGAALAACRALPEVDAARMAAIGFCFGGMCVLDLAR-----SGAD---------LRAVVSFHGLLG--APG------NTRDVQIPARVLVLHGHDDPMVPVDQVVALQTELSEAGADWQVHVYG-NTMHAFTNP---AAADPDFGTVYSAVADRRSWRAMSDFLEDSLA 220          
BLAST of mRNA_S-firma_M_contig96.20591.1 vs. uniprot
Match: UPI0005EBEB14 (dienelactone hydrolase family protein n=1 Tax=Methyloterricola oryzae TaxID=1495050 RepID=UPI0005EBEB14)

HSP 1 Score: 146 bits (369), Expect = 4.410e-37
Identity = 94/240 (39.17%), Postives = 130/240 (54.17%), Query Frame = 2
Query:  479 DGLPDRLPGVIVAHTAVGPQEDMILWKLDAIARLGYAAFALDMFGTGRALWDRAESLAARRPITEDRSLMQARAMSAVRTLGQMEGVDQERLAAVGYCFGGMAVLDLARMVPPDAGGDDDNTSALPRLKAVASLHGILAPISPGAGCKVPDDAPVGVPRVLVLHATADPFVPPEQVQAMEAEFSRRGANLEVVRYGGEALHAFTRPEKTGQADKDAGLSYCKHADADSWRRVVHLLREEL 1198
            D LP  LP V+V+H A G +++    K  A+ARLGYA FALDM+G  R      E+     P  +DR+L+QAR ++A++ +  +  VD  R+AA+G+CFGG+ VLDLAR      G D         ++ V S HG+L P    AG  +       + +VL LH   DP  PPEQV A++ E +  GA+ +V  YG   LHAFT P      D   G  Y + AD  SW+ + + L E L
Sbjct:   27 DSLPKPLPAVLVSH-AWGGRDEFACGKAQALARLGYAGFALDMYGDARVGSGPEENSRLMAPFMKDRALLQARQLAALQAVRALSEVDGTRVAAIGFCFGGLCVLDLAR-----TGAD---------IRGVVSFHGLLNPPENIAGRPI-------LAKVLALHGHDDPMAPPEQVLALQRELTTAGADWQVQVYG-HTLHAFTNPRAN---DPGFGTVYKEIADRRSWQSMQNFLSEVL 240          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig96.20591.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JKZ2_9PHAE3.310e-16368.87DLH domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A836CLU0_9STRA9.190e-6141.90Dienelactone hydrolase family protein n=1 Tax=Trib... [more]
A0A7S1HA30_HEMAN1.910e-5049.54Hypothetical protein n=1 Tax=Hemiselmis andersenii... [more]
A0A7S0HUL7_9CRYP5.610e-4940.00Hypothetical protein n=1 Tax=Hanusia phi TaxID=303... [more]
A0A0G4EJ35_VITBC6.970e-4438.89DLH domain-containing protein n=1 Tax=Vitrella bra... [more]
A0A7S2XY83_9STRA3.630e-4337.00Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A7S1J2W1_9EUGL2.070e-4044.34Hypothetical protein n=1 Tax=Eutreptiella gymnasti... [more]
A0A554WZ33_9BURK5.730e-3939.41Dienelactone hydrolase family protein n=2 Tax=Tepi... [more]
A0A2N6CHN5_9GAMM1.750e-3842.80Carboxymethylenebutenolidase n=1 Tax=Chromatiales ... [more]
UPI0005EBEB144.410e-3739.17dienelactone hydrolase family protein n=1 Tax=Meth... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig96contigS-firma_M_contig96:19591..23096 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-19
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score463.4
Seed ortholog evalue9.9e-128
Seed eggNOG ortholog2880.D8LC04
EggNOG free text desc.Dienelactone hydrolase family
EggNOG OGs2SB8C@2759,COG0412@1
COG Functional cat.Q
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categorysignal peptide
Exons6
Model size1556
Cds size1098
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig96.20591.1prot_S-firma_M_contig96.20591.1Sphaerotrichia firma Sfir_13m malepolypeptideS-firma_M_contig96 19697..22744 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622828795.2589936-UTR-S-firma_M_contig96:19590..196961622828795.2589936-UTR-S-firma_M_contig96:19590..19696Sphaerotrichia firma Sfir_13m maleUTRS-firma_M_contig96 19591..19696 +
1697105167.1671154-UTR-S-firma_M_contig96:19590..196961697105167.1671154-UTR-S-firma_M_contig96:19590..19696Sphaerotrichia firma Sfir_13m maleUTRS-firma_M_contig96 19591..19696 +
1622828795.3521268-UTR-S-firma_M_contig96:22744..230961622828795.3521268-UTR-S-firma_M_contig96:22744..23096Sphaerotrichia firma Sfir_13m maleUTRS-firma_M_contig96 22745..23096 +
1697105167.2358096-UTR-S-firma_M_contig96:22744..230961697105167.2358096-UTR-S-firma_M_contig96:22744..23096Sphaerotrichia firma Sfir_13m maleUTRS-firma_M_contig96 22745..23096 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622828795.270988-CDS-S-firma_M_contig96:19696..199031622828795.270988-CDS-S-firma_M_contig96:19696..19903Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig96 19697..19903 +
1697105167.1788528-CDS-S-firma_M_contig96:19696..199031697105167.1788528-CDS-S-firma_M_contig96:19696..19903Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig96 19697..19903 +
1622828795.2826264-CDS-S-firma_M_contig96:20397..206261622828795.2826264-CDS-S-firma_M_contig96:20397..20626Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig96 20398..20626 +
1697105167.187222-CDS-S-firma_M_contig96:20397..206261697105167.187222-CDS-S-firma_M_contig96:20397..20626Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig96 20398..20626 +
1622828795.2941573-CDS-S-firma_M_contig96:20900..210491622828795.2941573-CDS-S-firma_M_contig96:20900..21049Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig96 20901..21049 +
1697105167.1961634-CDS-S-firma_M_contig96:20900..210491697105167.1961634-CDS-S-firma_M_contig96:20900..21049Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig96 20901..21049 +
1622828795.3082893-CDS-S-firma_M_contig96:21391..214651622828795.3082893-CDS-S-firma_M_contig96:21391..21465Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig96 21392..21465 +
1697105167.2054994-CDS-S-firma_M_contig96:21391..214651697105167.2054994-CDS-S-firma_M_contig96:21391..21465Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig96 21392..21465 +
1622828795.3240738-CDS-S-firma_M_contig96:21953..221911622828795.3240738-CDS-S-firma_M_contig96:21953..22191Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig96 21954..22191 +
1697105167.2154484-CDS-S-firma_M_contig96:21953..221911697105167.2154484-CDS-S-firma_M_contig96:21953..22191Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig96 21954..22191 +
1622828795.3392754-CDS-S-firma_M_contig96:22543..227441622828795.3392754-CDS-S-firma_M_contig96:22543..22744Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig96 22544..22744 +
1697105167.2254674-CDS-S-firma_M_contig96:22543..227441697105167.2254674-CDS-S-firma_M_contig96:22543..22744Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig96 22544..22744 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-firma_M_contig96.20591.1

>prot_S-firma_M_contig96.20591.1 ID=prot_S-firma_M_contig96.20591.1|Name=mRNA_S-firma_M_contig96.20591.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=366bp
MRRGLGLVAALTLAAPSVRGWLCARGPHRGGVRVTPTRMASSHTKAINVQ
ELWPHLAGKQTSASNAAGKVIREAWAKDINGGVGAGDVSSSSSSPSAWNI
RHSVVDYKDDGGITLQGLYARPGGDGLPDRLPGVIVAHTAVGPQEDMILW
KLDAIARLGYAAFALDMFGTGRALWDRAESLAARRPITEDRSLMQARAMS
AVRTLGQMEGVDQERLAAVGYCFGGMAVLDLARMVPPDAGGDDDNTSALP
RLKAVASLHGILAPISPGAGCKVPDDAPVGVPRVLVLHATADPFVPPEQV
QAMEAEFSRRGANLEVVRYGGEALHAFTRPEKTGQADKDAGLSYCKHADA
DSWRRVVHLLREELS*
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mRNA from alignment at S-firma_M_contig96:19591..23096+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-firma_M_contig96.20591.1 ID=mRNA_S-firma_M_contig96.20591.1|Name=mRNA_S-firma_M_contig96.20591.1|organism=Sphaerotrichia firma Sfir_13m male|type=mRNA|length=3506bp|location=Sequence derived from alignment at S-firma_M_contig96:19591..23096+ (Sphaerotrichia firma Sfir_13m male)
TGTTGTTCGGGTGGATCGTTCATGTTTTAGGTTTTAGAATGTGCTGGCCG TGTTCAGTTGTCAGCAGCGCTGGTACTGGTAGTAGAGCCTTCTCCCCGTT GTGGACATGCGCAGAGGGCTGGGCCTGGTGGCAGCACTGACGCTTGCTGC ACCCTCTGTCAGAGGTTGGCTGTGCGCGCGTGGGCCGCACCGTGGAGGCG TGCGCGTGACGCCAACAAGAATGGCTTCCTCTCACACCAAGGCGATCAAC GTTCAAGAACTGTGGCCGCACCTCGCAGGGAAGCAGACGAGCGCTAGCAA CGCTGCTGGAAAGGTGAAGGGAGAGAAATAGCGGATGTGTTCGTGTATTA CTGTAGTCATGATTTGTTCGGAAGCGGTTTCTAGACAGCAGTTTACATAC ATAAAAGTAGGTAGCCGCGTAGTGCTGTGGTCTCGTCTTATATAGTTGGA CAAAGGGCAAAGAATGTGCCTCCGGAGAACGAGACTACGTGTAGACTACA GAGTAGGTTCCGTATCACACCGCATCCCACGTCTCTCGCTTTCTGAATCT GAACAATTCGTCTCCTACTCTCTTTCATGAATACCACCAAGGTGGTGGCC AACACCGCGCCTGTGTGCAGCAAGTTACGCACGTGTAAACTACAGTAGTA GGTTCTTCGAACTCATTCATCTCTCGACGCACAAGACGCATAATAAGTAG ACCCAGGGGAATCGCGAGGATGGCATGTTCAGCGGCAGAATAAAATATTT CAGTGTGTGGGGCAGGTTTCTGAGCCCCTTCGCAACCTGCAAACCCACCT GAATCAGGTGATTCGCGAAGCCTGGGCAAAAGATATAAACGGCGGTGTTG GTGCTGGCGACGTTTCTTCGTCTTCCTCCTCTCCGTCGGCATGGAACATC CGGCATAGCGTCGTGGATTACAAAGACGACGGGGGTATCACCCTCCAAGG ACTGTATGCCAGGCCTGGGGGCGACGGGCTTCCGGATAGGCTCCCTGGAG TGATCGTCGCTCACACCGCCGTTGGCCCACAGGAAGGTACCGTACTGCTG TGCGCGACTGGCAGGTGGCCAAGGGTTCTTACGTTACAGCGACGTTTTTT TAGATAACCGTGCTCGCGTCATACAGTGTTCGGGGGGGATACCTATCTGG TATGGTGACTCGTATGGAGTCTGGCAACGACTTGAGCAAACTGAAAACGA AAACCCTGTGGTTTTGTGCTGTACGCCTGCCCAATCGATATCTCCTCCCG CAGCACGAGATTTGTAATTTCATTTCGACAAGCACCCATTCCGTGCCGAA AACAAAACAGACATGATTCTGTGGAAGCTGGACGCGATCGCACGGCTCGG GTATGCAGCGTTTGCGTTGGATATGTTCGGGACCGGACGGGCATTGTGGG ACAGAGCCGAATCTCTAGCGGCAAGACGGCCCATCACCGAAGATCGATCT CTGATGCAGGTACAACCCGAAACGATCGACAGACGGACACCTGTTTCCAA CTATGCACAACATCTGAATCACTTTTGTTTGATAGAACTTACGTAGACTA ATAGTTGAACATTTCATTTAGTATTGGGATTTCGCACAGTGGCTAGGGCA GGTCATCAGCGTGCTGTCGTCTAGGGACAGGCGTGCCCGACAGTGAAAGC TCCCCCCTCTCACGTTGAGTTGAGGCCCGTGGTAGATGGACTGCTTGCGC ACCAAAGTTGGGTTTTGCTTGCCTCCGGGCGAGGAGCTGGTAAGAGCTCT TTTTCCGTTTGTCGTCATCCGGATCACGTCCACTATATCCACTGCATGCA GGCCCGCGCGATGTCTGCTGTCCGGACGTTAGGTCAGATGGAAGGCGTGG ATCAAGAGAGGTTAGCTGCGGTGGGGTGAGTGCGTCCCGTTGCGCTTGGT CTGCCCTGCCGAGTGCCAAGAGACACGCTCTCCACCCATTTTCAAAGCCT AGAGCATGCACGAAGCACGGCAGCAGTCTGATACGTAGATAAACGCATCT TGCCTCTCTTCTCCCGTAGCGTGTAGACTATTGATCTAGAGTAGTCTAGG TCAACACCCTAGTCGTTTACGCTCGTCAAGCGCAGAGTATGGCAACGCCG CCCGTGCGGTCGACGACACGACACGTTCAAGAACCAAAACGCCAATTTAA TTTCGCACAGAGGACCATGACACCAGTCAGCGCTGTCGGTTGCGAAGTGC TGTGGCATAAAAATACAACGTATCTATATATATATCTTGGTGTGTCCATT TTGCCCCTCCCGCGGCAGCATGCGCCTTGCGCAATTTCAACAGGGCGATT TGACTCGTGGAGGCTTCATCTGACGTATTGCCGATGTGATGGTGGTGTGA TGTGATGCTGCAGTTACTGTTTCGGTGGGATGGCTGTCCTGGATCTCGCG AGGATGGTGCCGCCTGACGCCGGCGGCGACGATGACAACACAAGCGCGCT TCCGAGGTTGAAGGCTGTTGCGTCGCTGCACGGAATTTTGGCCCCGATCT CGCCCGGCGCCGGGTGCAAGGTTCCCGACGACGCCCCTGTTGGTGTTCCG AGGGTGCTCGTGTTGCATGCCACCGCTGACCCGTTCGTGCCCCCAGAACA GGTGCGATATCGTAGACACTTTCGAAGTACGAACAGAATCCACACGGAGG GGACCACCCTTATTTAGGTTCGACAAAAGCAACCAGCACTTGTGAGTCGT GTCGGTGTCAAAATTAGTGCCGACTTTTTGGTTTGGTTTGTTGTGTGCGG ATTTAGAGCTGATCACGAGATCCTTTTCGTGCGCCAGCAAGCTGTGGAGG GCCTTCCAAAAGAGCAGCACACGCGGAATACAAACGAGCACTTTCCCACC CTCCTCTCGCATTTGATCCCATCCCATCCCTTCCCTTTTTCTGGCCACCT CTCGCATCTGACCCATCCCTTCCCTTTTTCTGGCCACCTGGCTGACCAAT CAGGTGCAAGCGATGGAAGCGGAGTTCTCGCGGCGAGGGGCCAACCTGGA AGTCGTGAGGTATGGAGGCGAGGCACTGCACGCCTTTACCCGACCGGAGA AGACCGGGCAGGCAGACAAGGATGCTGGGCTGTCCTACTGCAAGCACGCC GACGCGGACTCGTGGCGGCGGGTTGTCCATTTGCTACGGGAGGAACTGAG TTGACGAAAAGATGGGAAATTATATATTGACTGCGCCGGTGTGTTTTTGG CCGATTGTGTTTTATCTCTGGTTGGTTGACTGTGACACCCTTAGCGTGCC GTTGCATTCCACGAGGTGGGTCCTTCGGGGTTCCCTCTCCGCACCATGAG GGCGAGGACGGCCCTTGTAAAAATACTACATTTTCCATGTACTGGCGTCC TTCGTATTCCAAAGGTTAGGATATACCGCTCTAACGATGATACTTGGTTT CAATACCCGGCGTATTAGCTGGTCGATTTGCTAGTGTCCGAGCAGGACGA GTTTATTTGGACCTGCACGCATACAAAAGGCTTCCCGCGTGATACATGTC GCACAC
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Coding sequence (CDS) from alignment at S-firma_M_contig96:19591..23096+

>mRNA_S-firma_M_contig96.20591.1 ID=mRNA_S-firma_M_contig96.20591.1|Name=mRNA_S-firma_M_contig96.20591.1|organism=Sphaerotrichia firma Sfir_13m male|type=CDS|length=2196bp|location=Sequence derived from alignment at S-firma_M_contig96:19591..23096+ (Sphaerotrichia firma Sfir_13m male)
ATGCGCAGAGGGCTGGGCCTGGTGGCAGCACTGACGCTTGCTGCACCCTC
TGTCAGAGGTTGGCTGTGCGCGCGTGGGCCGCACCGTGGAGGCGTGCGCG
TGACGCCAACAAGAATGGCTTCCTCTCACACCAAGGCGATCAACGTTCAA
GAACTGTGGCCGCACCTCGCAGGGAAGCAGACGAGCGCTAGCAACGCTGC
TGGAAAGATGCGCAGAGGGCTGGGCCTGGTGGCAGCACTGACGCTTGCTG
CACCCTCTGTCAGAGGTTGGCTGTGCGCGCGTGGGCCGCACCGTGGAGGC
GTGCGCGTGACGCCAACAAGAATGGCTTCCTCTCACACCAAGGCGATCAA
CGTTCAAGAACTGTGGCCGCACCTCGCAGGGAAGCAGACGAGCGCTAGCA
ACGCTGCTGGAAAGGTGATTCGCGAAGCCTGGGCAAAAGATATAAACGGC
GGTGTTGGTGCTGGCGACGTTTCTTCGTCTTCCTCCTCTCCGTCGGCATG
GAACATCCGGCATAGCGTCGTGGATTACAAAGACGACGGGGGTATCACCC
TCCAAGGACTGTATGCCAGGCCTGGGGGCGACGGGCTTCCGGATAGGCTC
CCTGGAGTGATCGTCGCTCACACCGCCGTTGGCCCACAGGAAGGTGATTC
GCGAAGCCTGGGCAAAAGATATAAACGGCGGTGTTGGTGCTGGCGACGTT
TCTTCGTCTTCCTCCTCTCCGTCGGCATGGAACATCCGGCATAGCGTCGT
GGATTACAAAGACGACGGGGGTATCACCCTCCAAGGACTGTATGCCAGGC
CTGGGGGCGACGGGCTTCCGGATAGGCTCCCTGGAGTGATCGTCGCTCAC
ACCGCCGTTGGCCCACAGGAAGACATGATTCTGTGGAAGCTGGACGCGAT
CGCACGGCTCGGGTATGCAGCGTTTGCGTTGGATATGTTCGGGACCGGAC
GGGCATTGTGGGACAGAGCCGAATCTCTAGCGGCAAGACGGCCCATCACC
GAAGATCGATCTCTGATGCAGACATGATTCTGTGGAAGCTGGACGCGATC
GCACGGCTCGGGTATGCAGCGTTTGCGTTGGATATGTTCGGGACCGGACG
GGCATTGTGGGACAGAGCCGAATCTCTAGCGGCAAGACGGCCCATCACCG
AAGATCGATCTCTGATGCAGGCCCGCGCGATGTCTGCTGTCCGGACGTTA
GGTCAGATGGAAGGCGTGGATCAAGAGAGGTTAGCTGCGGTGGGGCCCGC
GCGATGTCTGCTGTCCGGACGTTAGGTCAGATGGAAGGCGTGGATCAAGA
GAGGTTAGCTGCGGTGGGTTACTGTTTCGGTGGGATGGCTGTCCTGGATC
TCGCGAGGATGGTGCCGCCTGACGCCGGCGGCGACGATGACAACACAAGC
GCGCTTCCGAGGTTGAAGGCTGTTGCGTCGCTGCACGGAATTTTGGCCCC
GATCTCGCCCGGCGCCGGGTGCAAGGTTCCCGACGACGCCCCTGTTGGTG
TTCCGAGGGTGCTCGTGTTGCATGCCACCGCTGACCCGTTCGTGCCCCCA
GAACAGTTACTGTTTCGGTGGGATGGCTGTCCTGGATCTCGCGAGGATGG
TGCCGCCTGACGCCGGCGGCGACGATGACAACACAAGCGCGCTTCCGAGG
TTGAAGGCTGTTGCGTCGCTGCACGGAATTTTGGCCCCGATCTCGCCCGG
CGCCGGGTGCAAGGTTCCCGACGACGCCCCTGTTGGTGTTCCGAGGGTGC
TCGTGTTGCATGCCACCGCTGACCCGTTCGTGCCCCCAGAACAGGTGCAA
GCGATGGAAGCGGAGTTCTCGCGGCGAGGGGCCAACCTGGAAGTCGTGAG
GTATGGAGGCGAGGCACTGCACGCCTTTACCCGACCGGAGAAGACCGGGC
AGGCAGACAAGGATGCTGGGCTGTCCTACTGCAAGCACGCCGACGCGGAC
TCGTGGCGGCGGGTTGTCCATTTGCTACGGGAGGAACTGAGTTGAGTGCA
AGCGATGGAAGCGGAGTTCTCGCGGCGAGGGGCCAACCTGGAAGTCGTGA
GGTATGGAGGCGAGGCACTGCACGCCTTTACCCGACCGGAGAAGACCGGG
CAGGCAGACAAGGATGCTGGGCTGTCCTACTGCAAGCACGCCGACGCGGA
CTCGTGGCGGCGGGTTGTCCATTTGCTACGGGAGGAACTGAGTTGA
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