mRNA_S-firma_M_contig9559.20552.1 (mRNA) Sphaerotrichia firma Sfir_13m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-firma_M_contig9559.20552.1
Unique NamemRNA_S-firma_M_contig9559.20552.1
TypemRNA
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Homology
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BLAST of mRNA_S-firma_M_contig9559.20552.1 vs. uniprot
Match: D7G4E7_ECTSI (HECT domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4E7_ECTSI)

HSP 1 Score: 180 bits (456), Expect = 1.200e-50
Identity = 87/92 (94.57%), Postives = 88/92 (95.65%), Query Frame = 1 
Query:   34 MSSLDPAGRRQFLRFVTGTPRLPIGGFGALRPRLTVVKKEVDVLPGGTPDSHLPSCSTCQVYLKLPAYTSKVALEAKLKHAITEGQDHFALD 309
            MS LD  GRRQFLRFVTGTPRLPIGGFGALRPRLTVVKKEVDVLPGGTPDSHLPSCSTCQVYLKLPAYTS+ ALEAKLKHAITEGQDHFALD
Sbjct:    1 MSDLDTEGRRQFLRFVTGTPRLPIGGFGALRPRLTVVKKEVDVLPGGTPDSHLPSCSTCQVYLKLPAYTSRAALEAKLKHAITEGQDHFALD 92
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BLAST of mRNA_S-firma_M_contig9559.20552.1 vs. uniprot
Match: A0A6H5K2P5_9PHAE (HECT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2P5_9PHAE)

HSP 1 Score: 194 bits (493), Expect = 2.610e-48
Identity = 94/100 (94.00%), Postives = 95/100 (95.00%), Query Frame = 1 
Query:   10 QVKWLASVMSSLDPAGRRQFLRFVTGTPRLPIGGFGALRPRLTVVKKEVDVLPGGTPDSHLPSCSTCQVYLKLPAYTSKVALEAKLKHAITEGQDHFALD 309
            QVKWLA VMS LD  GRRQFLRFVTGTPRLPIGGFGALRPRLTVVKKEVDVLPGGTPDSHLPSCSTCQVYLKLPAYTS+ ALEAKLKHAITEGQDHFALD
Sbjct: 2259 QVKWLARVMSELDTEGRRQFLRFVTGTPRLPIGGFGALRPRLTVVKKEVDVLPGGTPDSHLPSCSTCQVYLKLPAYTSRAALEAKLKHAITEGQDHFALD 2358
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BLAST of mRNA_S-firma_M_contig9559.20552.1 vs. uniprot
Match: A0A835Z7D6_9STRA (HECT domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7D6_9STRA)

HSP 1 Score: 130 bits (327), Expect = 1.220e-29
Identity = 66/100 (66.00%), Postives = 74/100 (74.00%), Query Frame = 1 
Query:   10 QVKWLASVMSSLDPAGRRQFLRFVTGTPRLPIGGFGALRPRLTVVKKEVDVLPGGTPDSHLPSCSTCQVYLKLPAYTSKVALEAKLKHAITEGQDHFALD 309
            QV  L  V+S LD A RR FL FVTG+PRLP+GGF AL+PRLTVV+K+        PD HLPSCSTCQVYLKLPAYT K  L AKL  AI EG++HFALD
Sbjct:  244 QVAALVEVLSELDAAQRRAFLSFVTGSPRLPLGGFAALQPRLTVVRKDTP-----RPDEHLPSCSTCQVYLKLPAYTCKAVLRAKLLQAINEGREHFALD 338
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BLAST of mRNA_S-firma_M_contig9559.20552.1 vs. uniprot
Match: A0A2R5GSN0_9STRA (HECT-type E3 ubiquitin transferase n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GSN0_9STRA)

HSP 1 Score: 120 bits (301), Expect = 2.780e-24
Identity = 59/100 (59.00%), Postives = 74/100 (74.00%), Query Frame = 1 
Query:   10 QVKWLASVMSSLDPAGRRQFLRFVTGTPRLPIGGFGALRPRLTVVKKEVDVLPGGTPDSHLPSCSTCQVYLKLPAYTSKVALEAKLKHAITEGQDHFALD 309
            Q++ L  V+S LD + RR F++F+TG+PRLP+GGFG LRPRLTVV+K V       PD  LPSCSTCQVYLKLP Y+S+  L+ +L  A+ EGQ HFALD
Sbjct: 2699 QIRDLVHVLSELDGSDRRLFMQFLTGSPRLPVGGFGELRPRLTVVRKNV----ADDPDGILPSCSTCQVYLKLPPYSSREVLKRRLLQAVREGQGHFALD 2794
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BLAST of mRNA_S-firma_M_contig9559.20552.1 vs. uniprot
Match: A0A482RGR4_9ARCH (HECT domain-containing protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RGR4_9ARCH)

HSP 1 Score: 101 bits (252), Expect = 3.030e-21
Identity = 56/105 (53.33%), Postives = 67/105 (63.81%), Query Frame = 1 
Query:   13 VKWLASVMSSLDPAGRRQFLRFVTGTPRLPIGGFGALRPRLTVVK------KEVDVLPGGTPDSHLPSCSTCQVYLKLPAYTSKVALEAKLKHAITEGQDHFALD 309
            V+ L  V+     A RR F+RF+TG PRLP GGFGAL+P LT+V+      +E D L        LP+CSTC VYLKLPAY+SK  L AKL  AI EGQ+ FA D
Sbjct:   79 VRALLEVLHEFSAAERRLFMRFITGAPRLPSGGFGALQPPLTIVRTAAHDREEADAL--------LPTCSTCHVYLKLPAYSSKTQLRAKLLLAIREGQEVFAFD 175
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BLAST of mRNA_S-firma_M_contig9559.20552.1 vs. uniprot
Match: A0A7S1CCF7_9STRA (HECT-type E3 ubiquitin transferase n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CCF7_9STRA)

HSP 1 Score: 110 bits (275), Expect = 3.690e-21
Identity = 57/99 (57.58%), Postives = 69/99 (69.70%), Query Frame = 1 
Query:   13 VKWLASVMSSLDPAGRRQFLRFVTGTPRLPIGGFGALRPRLTVVKKEVDVLPGGTPDSHLPSCSTCQVYLKLPAYTSKVALEAKLKHAITEGQDHFALD 309
            V+ L  V+S LDP  RRQFL F TG+PRLP+GGF AL PRLT+V+K+   LPG +PD+ LPS STC  YLKLP YTSK  +  +L  AIT+G   F L 
Sbjct: 2026 VQMLVEVLSDLDPVLRRQFLLFTTGSPRLPVGGFNALLPRLTIVQKKP--LPGRSPDASLPSASTCTNYLKLPQYTSKEIMHERLVRAITDGAGAFHLS 2122
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BLAST of mRNA_S-firma_M_contig9559.20552.1 vs. uniprot
Match: A0A7S1G2E8_9STRA (HECT-type E3 ubiquitin transferase n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G2E8_9STRA)

HSP 1 Score: 107 bits (266), Expect = 4.800e-20
Identity = 55/101 (54.46%), Postives = 65/101 (64.36%), Query Frame = 1 
Query:    7 PQVKWLASVMSSLDPAGRRQFLRFVTGTPRLPIGGFGALRPRLTVVKKEVDVLPGGTPDSHLPSCSTCQVYLKLPAYTSKVALEAKLKHAITEGQDHFALD 309
            PQV+ L S+MS      RR FLRFVTG PRLP+GGF +LRP LT+VK      PG   D  +P+C  C VYLKLPAYT  V L  KL  AI +GQ+ F +D
Sbjct: 2810 PQVQQLVSIMSEFTTQERRLFLRFVTGAPRLPMGGFASLRPPLTIVKTVPP--PGRIADEMMPTCMVCSVYLKLPAYTEPVVLRDKLHMAIRDGQESFEMD 2908
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BLAST of mRNA_S-firma_M_contig9559.20552.1 vs. uniprot
Match: A0A4P9ZF83_9ASCO (HECT-type E3 ubiquitin transferase n=1 Tax=Metschnikowia bicuspidata TaxID=27322 RepID=A0A4P9ZF83_9ASCO)

HSP 1 Score: 103 bits (257), Expect = 4.760e-19
Identity = 52/103 (50.49%), Postives = 67/103 (65.05%), Query Frame = 1 
Query:    1 NQPQVKWLASVMSSLDPAGRRQFLRFVTGTPRLPIGGFGALRPRLTVVKKEVDVLPGGTPDSHLPSCSTCQVYLKLPAYTSKVALEAKLKHAITEGQDHFALD 309
            N   +K L S++S      RRQFL+F+TG+PRLPIGGF AL P+LT+VKK VD   G   D HLPS  TC  YLK+P Y+ +  ++AK+  A+ EG D F L 
Sbjct: 1296 NSTAIKHLLSIISDFSKVERRQFLQFLTGSPRLPIGGFAALNPKLTIVKKHVD--SGQKTDDHLPSVMTCANYLKMPDYSLRDIMKAKILQAMREGSDSFHLS 1396
[Close]
BLAST of mRNA_S-firma_M_contig9559.20552.1 vs. uniprot
Match: A0A183LWB1_9TREM (E3 ubiquitin-protein ligase n=2 Tax=Schistosoma TaxID=6181 RepID=A0A183LWB1_9TREM)

HSP 1 Score: 96.7 bits (239), Expect = 5.310e-19
Identity = 50/99 (50.51%), Postives = 64/99 (64.65%), Query Frame = 1 
Query:   13 VKWLASVMSSLDPAGRRQFLRFVTGTPRLPIGGFGALRPRLTVVKKEVDVLPGGTPDSHLPSCSTCQVYLKLPAYTSKVALEAKLKHAITEGQDHFALD 309
            ++ L  +MS   P  RR F++FVTG+PRLP+GGF AL+P L +V K      G   D HLPS  TCQ YLKLP Y+SK  + +KL +AI EGQ+ F L 
Sbjct:  127 IRLLFEIMSEFTPEQRRLFVQFVTGSPRLPVGGFRALKPPLKIVMKRET---GENADHHLPSVMTCQNYLKLPDYSSKALMLSKLLYAINEGQNAFHLS 222
[Close]
BLAST of mRNA_S-firma_M_contig9559.20552.1 vs. uniprot
Match: A0A183R5A5_9TREM (E3 ubiquitin-protein ligase n=1 Tax=Schistosoma rodhaini TaxID=6188 RepID=A0A183R5A5_9TREM)

HSP 1 Score: 95.5 bits (236), Expect = 8.550e-19
Identity = 50/99 (50.51%), Postives = 64/99 (64.65%), Query Frame = 1 
Query:   13 VKWLASVMSSLDPAGRRQFLRFVTGTPRLPIGGFGALRPRLTVVKKEVDVLPGGTPDSHLPSCSTCQVYLKLPAYTSKVALEAKLKHAITEGQDHFALD 309
            ++ L  +MS   P  RR F++FVTG+PRLP+GGF AL+P L +V K      G   D HLPS  TCQ YLKLP Y+SK  + +KL +AI EGQ+ F L 
Sbjct:  108 IRLLFEIMSEFTPEQRRLFVQFVTGSPRLPVGGFRALKPPLKIVMKRET---GENVDHHLPSVMTCQNYLKLPDYSSKELMLSKLLYAINEGQNAFHLS 203
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig9559.20552.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G4E7_ECTSI1.200e-5094.57HECT domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5K2P5_9PHAE2.610e-4894.00HECT domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A835Z7D6_9STRA1.220e-2966.00HECT domain-containing protein n=1 Tax=Tribonema m... [more]
A0A2R5GSN0_9STRA2.780e-2459.00HECT-type E3 ubiquitin transferase n=1 Tax=Hondaea... [more]
A0A482RGR4_9ARCH3.030e-2153.33HECT domain-containing protein (Fragment) n=1 Tax=... [more]
A0A7S1CCF7_9STRA3.690e-2157.58HECT-type E3 ubiquitin transferase n=1 Tax=Bicosoe... [more]
A0A7S1G2E8_9STRA4.800e-2054.46HECT-type E3 ubiquitin transferase n=1 Tax=Bicosoe... [more]
A0A4P9ZF83_9ASCO4.760e-1950.49HECT-type E3 ubiquitin transferase n=1 Tax=Metschn... [more]
A0A183LWB1_9TREM5.310e-1950.51E3 ubiquitin-protein ligase n=2 Tax=Schistosoma Ta... [more]
A0A183R5A5_9TREM8.550e-1950.51E3 ubiquitin-protein ligase n=1 Tax=Schistosoma ro... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig9559contigS-firma_M_contig9559:996..3747 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-19
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score182.2
Seed ortholog evalue1.1e-43
Seed eggNOG ortholog2880.D7G4E7
KEGG koko:K03874,ko:K10590
KEGG Pathwayko04120,map04120
EggNOG free text desc.negative regulation of histone ubiquitination
EggNOG OGsCOG5021@1,KOG0170@2759
EC2.3.2.26
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko04121
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionHECT
Ec32 orthologEc-13_002660.1
Exons2
Model size1994
Cds size279
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig9559.20552.1prot_S-firma_M_contig9559.20552.1Sphaerotrichia firma Sfir_13m malepolypeptideS-firma_M_contig9559 2678..3714 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622828790.9316254-UTR-S-firma_M_contig9559:995..26771622828790.9316254-UTR-S-firma_M_contig9559:995..2677Sphaerotrichia firma Sfir_13m maleUTRS-firma_M_contig9559 996..2677 -
1697105164.5028882-UTR-S-firma_M_contig9559:995..26771697105164.5028882-UTR-S-firma_M_contig9559:995..2677Sphaerotrichia firma Sfir_13m maleUTRS-firma_M_contig9559 996..2677 -
1622828790.9719613-UTR-S-firma_M_contig9559:3714..37471622828790.9719613-UTR-S-firma_M_contig9559:3714..3747Sphaerotrichia firma Sfir_13m maleUTRS-firma_M_contig9559 3715..3747 -
1697105164.5386004-UTR-S-firma_M_contig9559:3714..37471697105164.5386004-UTR-S-firma_M_contig9559:3714..3747Sphaerotrichia firma Sfir_13m maleUTRS-firma_M_contig9559 3715..3747 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622828790.945832-CDS-S-firma_M_contig9559:2677..27761622828790.945832-CDS-S-firma_M_contig9559:2677..2776Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig9559 2678..2776 -
1697105164.5164626-CDS-S-firma_M_contig9559:2677..27761697105164.5164626-CDS-S-firma_M_contig9559:2677..2776Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig9559 2678..2776 -
1622828790.9599833-CDS-S-firma_M_contig9559:3534..37141622828790.9599833-CDS-S-firma_M_contig9559:3534..3714Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig9559 3535..3714 -
1697105164.526277-CDS-S-firma_M_contig9559:3534..37141697105164.526277-CDS-S-firma_M_contig9559:3534..3714Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig9559 3535..3714 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-firma_M_contig9559.20552.1

>prot_S-firma_M_contig9559.20552.1 ID=prot_S-firma_M_contig9559.20552.1|Name=mRNA_S-firma_M_contig9559.20552.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=93bp
MSSLDPAGRRQFLRFVTGTPRLPIGGFGALRPRLTVVKKEVDVLPGGTPD
SHLPSCSTCQVYLKLPAYTSKVALEAKLKHAITEGQDHFALD*
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mRNA from alignment at S-firma_M_contig9559:996..3747-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-firma_M_contig9559.20552.1 ID=mRNA_S-firma_M_contig9559.20552.1|Name=mRNA_S-firma_M_contig9559.20552.1|organism=Sphaerotrichia firma Sfir_13m male|type=mRNA|length=2752bp|location=Sequence derived from alignment at S-firma_M_contig9559:996..3747- (Sphaerotrichia firma Sfir_13m male)
AACCAACCCCAGGTGAAGTGGCTGGCGAGCGTCATGTCCTCCCTCGACCC
GGCGGGGCGGCGGCAGTTCCTGCGGTTCGTGACGGGGACGCCGCGCCTCC
CCATCGGAGGCTTCGGGGCCCTGCGGCCGCGGCTGACGGTGGTGAAGAAG
GAGGTGGACGTTCTACCCGGCGGGACCCCCGACAGCCACCTCCCGAGCTG
CTCGACCTGCCAGGTGCGTGGTTGCCTGTTGGTGGTTCGTGTTTTTGTTT
TTTTGTTTTTTTGTTTTTTTTCTTTTGTTTCTCACATTAGCTCTATATTC
CGAAAAACATCCATGGGAGCCAGCCCGTGGTCACAAAAACTGGGCACAAT
CGTCGCCGCAAAGTAACTCGGAAAAAAGCCTGTTGGTGTGTGTGTGTTGT
GATTTGTGTTGGTTTGATCTTTCTCGTCGTCGTGGTTTTGGTGTTGCGCG
TGGCTGGGTGTTGGAGGGTGTGGGGTGTGGGAGCAAACGCCCGTTTCGAG
TTCTTTCTGCGCGGTGCCGTGGCTGAGAGCGAAGCAGCAGAGCAGCTGAG
CGGCGCTCACTTTTGCGAAGAGTTGTCGTTGTCGTTGTCGTTGTTGTTGT
TGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTTTTGTGT
TTGTTGTTGTTTTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTT
GTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGT
TGTTTGGGTAGGTTGGGTTTGGTATTCTTATCAATTTGTTCTTGTTGCCT
CTCTTTTTTGTGAGAGCCACTTGGCCAAACGAGCCAGTCAAGCAGACAGG
TTAAGCAGACGAGATGATTGAGTTCTGCCCTCCTGTCGTTTTCCCGCCGC
CGGTCGCCTGTTCTTGTGTGTGTGTGTGTGCGTGCGTGTGTGTGTGATTT
ATTTTGTCATGTAATTGACAGGTGTACCTGAAGCTGCCGGCGTACACCTC
CAAGGTGGCGCTGGAGGCCAAGCTGAAGCACGCCATCACGGAGGGCCAAG
ACCACTTCGCGCTGGACTAGTGCGCGCTAGGCTAGTCTACAGTAGTACGC
CGACGCGTCCTTTCCTTTCTTTTCCTTTCTCTCGCCTCTCTCTTCTCTCT
TCTCCCTCGTTCGTGTGGGTTTGCGAGCGCGATGCGCGTCAACTCGCGCT
GAGAAGGTTGTTGTTTTTTTTGCTTGTGGCGGCGGTTTGTCGCTGGAGAC
GTCTGGCTGCAGGTGGCGGTGGCGATGTGCTAGATAGAACCACGAGTGAT
GTGCTTTCCGTGTGCGTTGTTGGTGCTGCGTGCTGTTCGAGTGGGCGATG
TTCTTTCTACACAGACGGAAGAAGAGAGCGAGAGTTGATGAACGGAGTTG
AAAAGGTGCGGAATCTTTCACAGGGTTTTTCGATTTTCGCGCGGAACTAG
ACGTTAAATTCCTCCGTACCTGCAGCGTAGATGTTTGACCCTGTGTCCCC
GGTGTCTGTGCTCGAGCGTGTTCTGAGTGCACGCTACGGTGCGCTTTATC
GCGCGCGTGTTCTGAGTGTATTCTTTGTGTCTCCGCTCTTGCGGTTGATT
CCGTCGTTTGTCTTTGCGTGCTGTGCTTGGTTTCCTTCACGGCGACAGGG
GTGTGTGCATTCGTTTTGGCGGCGATGGGCGTGGGCGTGGGCGTGGGCGT
GTGTGTGGGTGTAGGTGTCAACACGAAGGCCATGCGTGGTTTTGAGGCGA
GCTAGATATCTTCCCCGAACGTCAAGATTTCGCGGGAGACCGGGACTTCT
GTTGGCCTCTTGTCTGCCACAGCTGTAGTAGCTGTGTGATGTACGAGCCT
ACAGCAATGTAAGCACCAACGAAATGGTTGTTTTCTTTGTTCTCGAATTG
TGGTCGGTGGGCAAGGGTTCCCTCCCAACGCATGCCCATCGCGGCTGCAA
AGGTGGTGCTGGCTGTCGACCACGCAGGCGGGGCGACAGGCAAGCACCCT
TTCGCCGGGGGGGGGCATCGTGAGGGATTGCTGTGCCTTGGAGGTGCGTG
CCACCACCGTTGCGAAACCCCTGTATCTCCCCTGCGGAACTCTGTTTCAT
GCATCGGCAGCTGTGTGTCGCGCACGGCGGATTTCGCCGCAAGTCGATTT
CGGAGGGGCTTGGGAATAGATAAGAGAGAGGAATGGAGTTCGATTGCGTT
TGCTTTTTTGGGGAGAGGGCGGGCAAGTTGCGCGTACATCTACTACGGGG
AGGGAAAATTTTTTCGGGCGTGTTTTCGGGGCTTGGGCAACGGACGAGGC
GATACATGCCGGCTAAATAGTTTTGATCAAGTTTCTGGCCCCGATTACTG
CGTCGATGTCACTCCCGCACGTGTATGACCACGCACGTGTATGACCATGC
ACGCCCCGATCACAGGTCTTTCGCATGCATGATCCTGTTGTTGTTGGAAG
CCCAATCTTCGTTTTTTTTTGGCGGCGGCTGGCGTGGTGTTTGTTCGCTC
TGGCTTTTGTTTGTTTTGGACGGTCTGCCTGCCTAAGTATACTATTGATA
CGTGAGGGCTGCTTTCTCGATTTTTTCAGGTGTTGGTGGGGGCTGGGGTC
TAAATGCGAACGAGATTGTTTGAAGAATGGCGTACATATATATATACGGA
GTATCTATATATCTGCCGCAAGGAACGACTGGTGTTTGCACGCCACTGCG
GGCACTGCTGCTGCGGCACGCACCTGCAGACATGGCCAGGGGTGGTCGGA
TC
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Coding sequence (CDS) from alignment at S-firma_M_contig9559:996..3747-

>mRNA_S-firma_M_contig9559.20552.1 ID=mRNA_S-firma_M_contig9559.20552.1|Name=mRNA_S-firma_M_contig9559.20552.1|organism=Sphaerotrichia firma Sfir_13m male|type=CDS|length=558bp|location=Sequence derived from alignment at S-firma_M_contig9559:996..3747- (Sphaerotrichia firma Sfir_13m male)
ATGTCCTCCCTCGACCCGGCGGGGCGGCGGCAGTTCCTGCGGTTCGTGAC
GGGGACGCCGCGCCTCCCCATCGGAGGCTTCGGGGCCCTGCGGCCGCGGC
TGACGGTGGTGAAGAAGGAGGTGGACGTTCTACCCGGCGGGACCCCCGAC
AGCCACCTCCCGAGCTGCTCGACCTGCCAGATGTCCTCCCTCGACCCGGC
GGGGCGGCGGCAGTTCCTGCGGTTCGTGACGGGGACGCCGCGCCTCCCCA
TCGGAGGCTTCGGGGCCCTGCGGCCGCGGCTGACGGTGGTGAAGAAGGAG
GTGGACGTTCTACCCGGCGGGACCCCCGACAGCCACCTCCCGAGCTGCTC
GACCTGCCAGGTGTACCTGAAGCTGCCGGCGTACACCTCCAAGGTGGCGC
TGGAGGCCAAGCTGAAGCACGCCATCACGGAGGGCCAAGACCACTTCGCG
CTGGACTAGGTGTACCTGAAGCTGCCGGCGTACACCTCCAAGGTGGCGCT
GGAGGCCAAGCTGAAGCACGCCATCACGGAGGGCCAAGACCACTTCGCGC
TGGACTAG
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