mRNA_S-firma_M_contig9546.20541.1 (mRNA) Sphaerotrichia firma Sfir_13m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-firma_M_contig9546.20541.1
Unique NamemRNA_S-firma_M_contig9546.20541.1
TypemRNA
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Homology
BLAST of mRNA_S-firma_M_contig9546.20541.1 vs. uniprot
Match: A0A0Q1CD61_9FLAO (Two component regulator three Y domain-containing protein n=3 Tax=Flavobacteriaceae TaxID=49546 RepID=A0A0Q1CD61_9FLAO)

HSP 1 Score: 654 bits (1688), Expect = 4.330e-213
Identity = 323/332 (97.29%), Postives = 330/332 (99.40%), Query Frame = 1
Query:    1 IQATGGTAPYEFRLVGEPAFNPADNTPGPGDIYDFTGQVTFGVTYFVEVRDANGCTYIEEIDPITATNPVTVTANSSTASCNVAGSGGIDYEVSGISSNPGNFTVTLENTDTGAVEAGPDTYTSEPIPFNDTFTGLAPGNYQIIVTDTDSGCSSSTLVFIGFSSPSIVVDNNVEATCNAGALVTVRGFGGTAPFGYAYVPNGDPAPTVFGTDTTFEIPGPYPSDYDFYVEDANGCTALTTVTVTQEAGIPAPAIDVINQCTATSGYQINVTAPLSTGSGLPDETFMYDIGSGFQSSVNFVVPNPGSYVITIRDGNGCTATIAADVFDFFAIT 996
            +QA+GGTAPYEFRLVGEPAFNPADNTPG GDIYDFTGQVTFGVTYFVEVRDANGCTYIEEIDPITATNPVTVTANSSTASCNVAGSGGIDYEVSGI+S+PGNFTVTLENTDTGA+EAGPDTYTSEPIPFNDTFTGLAPGNYQIIVTD D+GCSSSTLVFIGFSSPSIVVDNNVEATCNAGALVTVRGFGGTAPFGYAYVPNGDPAPTVFGTDTTFEIPGPYPSDYDFYVEDANGCTALTTVTVTQEAGIPAPAIDVINQCTATSGYQINVTAPLSTGSGLP+ETFMYDIGSGFQSSVNFVVPNPGSYVITIRDGNGCTATIAADVFDFFAIT
Sbjct: 1210 VQASGGTAPYEFRLVGEPAFNPADNTPGQGDIYDFTGQVTFGVTYFVEVRDANGCTYIEEIDPITATNPVTVTANSSTASCNVAGSGGIDYEVSGITSSPGNFTVTLENTDTGAIEAGPDTYTSEPIPFNDTFTGLAPGNYQIIVTDDDTGCSSSTLVFIGFSSPSIVVDNNVEATCNAGALVTVRGFGGTAPFGYAYVPNGDPAPTVFGTDTTFEIPGPYPSDYDFYVEDANGCTALTTVTVTQEAGIPAPAIDVINQCTATSGYQINVTAPLSTGSGLPEETFMYDIGSGFQSSVNFVVPNPGSYVITIRDGNGCTATIAADVFDFFAIT 1541          
BLAST of mRNA_S-firma_M_contig9546.20541.1 vs. uniprot
Match: A0A285MY46_9FLAO (Gliding motility-associated C-terminal domain-containing protein n=1 Tax=Muricauda parva TaxID=1247520 RepID=A0A285MY46_9FLAO)

HSP 1 Score: 571 bits (1471), Expect = 4.320e-183
Identity = 284/332 (85.54%), Postives = 305/332 (91.87%), Query Frame = 1
Query:    1 IQATGGTAPYEFRLVGEPAFNPADNTPGPGDIYDFTGQVTFGVTYFVEVRDANGCTYIEEIDPITATNPVTVTANSSTASCNVAGSGGIDYEVSGISSNPGNFTVTLENTDTGAVEAGPDTYTSEPIPFNDTFTGLAPGNYQIIVTDTDSGCSSSTLVFIGFSSPSIVVDNNVEATCNAGALVTVRGFGGTAPFGYAYVPNGDPAPTVFGTDTTFEIPGPYPSDYDFYVEDANGCTALTTVTVTQEAGIPAPAIDVINQCTATSGYQINVTAPLSTGSGLPDETFMYDIGSGFQSSVNFVVPNPGSYVITIRDGNGCTATIAADVFDFFAIT 996
            ++ATGGTAPYEFRLVG+P FNPA  T G GD YDFTGQVTFGVTYFVEVRDA GCTYIEEIDPITA +PVTV A ++TASCNV+GSGGID++VSG+ +NP NFTVTLENTDTGA  +GP +YT+EPIPFNDTFTGLAPGNYQIIVTDTD+GCS STLVFIGFSSP+IVVDNNV+ATCNAGA VTVRGFGGTAPFGYAYVP G+PAPT FGTDTTFEI GPYP DYDFYVEDANGCTALTTVTV+QE GIP PAIDV NQCTATSGYQI VTAPLSTGSGLP+ETFMYDIGSGFQSSVNFVVPNPGSYVITIRDGNGCT TI ADVFDFFAI+
Sbjct: 1210 VRATGGTAPYEFRLVGDPTFNPA--TSG-GDTYDFTGQVTFGVTYFVEVRDALGCTYIEEIDPITAPSPVTVAATTTTASCNVSGSGGIDFQVSGLPANPANFTVTLENTDTGATISGPISYTNEPIPFNDTFTGLAPGNYQIIVTDTDTGCSGSTLVFIGFSSPTIVVDNNVQATCNAGAFVTVRGFGGTAPFGYAYVPTGNPAPTTFGTDTTFEISGPYPVDYDFYVEDANGCTALTTVTVSQEPGIPTPAIDVTNQCTATSGYQIEVTAPLSTGSGLPNETFMYDIGSGFQSSVNFVVPNPGSYVITIRDGNGCTDTITADVFDFFAIS 1538          
BLAST of mRNA_S-firma_M_contig9546.20541.1 vs. uniprot
Match: A0A5C8V0A5_9FLAO (T9SS type B sorting domain-containing protein n=1 Tax=Flagellimonas hymeniacidonis TaxID=2603628 RepID=A0A5C8V0A5_9FLAO)

HSP 1 Score: 557 bits (1435), Expect = 3.550e-178
Identity = 280/332 (84.34%), Postives = 300/332 (90.36%), Query Frame = 1
Query:    1 IQATGGTAPYEFRLVGEPAFNPADNTPGPGDIYDFTGQVTFGVTYFVEVRDANGCTYIEEIDPITATNPVTVTANSSTASCNVAGSGGIDYEVSGISSNPGNFTVTLENTDTGAVEAGPDTYTSEPIPFNDTFTGLAPGNYQIIVTDTDSGCSSSTLVFIGFSSPSIVVDNNVEATCNAGALVTVRGFGGTAPFGYAYVPNGDPAPTVFGTDTTFEIPGPYPSDYDFYVEDANGCTALTTVTVTQEAGIPAPAIDVINQCTATSGYQINVTAPLSTGSGLPDETFMYDIGSGFQSSVNFVVPNPGSYVITIRDGNGCTATIAADVFDFFAIT 996
            +QA+GGT PYEFRLVG+P F     T    DI+D TG V   VTYFVEVRDANGCTYIEEID +TA +PVTVTA S+TASCNVAGSGGIDYEVSGISSNPG+FTVTLENTDTGA  +GP ++T+EPIPFNDTFTGLAPGNYQIIV+D  +GCSSSTLVFIGFSSPSIV+DNNVEATCN GA VTVRGFGGTAPFGYAYVPNGDPAPTVF TDTTFEIPGPY SDYDFYV+DANGCTALTT TVTQEAGIP PAIDVINQCTATSGYQI+VTAP+STGSGLP+ETFMYDIGSGFQSSVNFVVPNPGSYVITIRDGNGCT TI A+VFDFFAIT
Sbjct: 1210 VQASGGTEPYEFRLVGDPTFQLG--TGLNNDIFDVTGLVVPNVTYFVEVRDANGCTYIEEIDFLTAPSPVTVTATSTTASCNVAGSGGIDYEVSGISSNPGDFTVTLENTDTGATISGPTSHTNEPIPFNDTFTGLAPGNYQIIVSDDVTGCSSSTLVFIGFSSPSIVIDNNVEATCNTGAFVTVRGFGGTAPFGYAYVPNGDPAPTVFSTDTTFEIPGPYASDYDFYVQDANGCTALTTATVTQEAGIPTPAIDVINQCTATSGYQIDVTAPISTGSGLPEETFMYDIGSGFQSSVNFVVPNPGSYVITIRDGNGCTDTITAEVFDFFAIT 1539          
BLAST of mRNA_S-firma_M_contig9546.20541.1 vs. uniprot
Match: UPI001683CABB (T9SS type B sorting domain-containing protein n=1 Tax=Flagellimonas sp. S3867 TaxID=2768063 RepID=UPI001683CABB)

HSP 1 Score: 555 bits (1431), Expect = 1.240e-177
Identity = 278/332 (83.73%), Postives = 300/332 (90.36%), Query Frame = 1
Query:    1 IQATGGTAPYEFRLVGEPAFNPADNTPGPGDIYDFTGQVTFGVTYFVEVRDANGCTYIEEIDPITATNPVTVTANSSTASCNVAGSGGIDYEVSGISSNPGNFTVTLENTDTGAVEAGPDTYTSEPIPFNDTFTGLAPGNYQIIVTDTDSGCSSSTLVFIGFSSPSIVVDNNVEATCNAGALVTVRGFGGTAPFGYAYVPNGDPAPTVFGTDTTFEIPGPYPSDYDFYVEDANGCTALTTVTVTQEAGIPAPAIDVINQCTATSGYQINVTAPLSTGSGLPDETFMYDIGSGFQSSVNFVVPNPGSYVITIRDGNGCTATIAADVFDFFAIT 996
            +QATGGTAPYEFRLVG+P F  A N  G  DI+DF+  VTFGVTYFVEVRDA GC YIEEIDPI   +PVTVTA S+TASCNVAGSG I YE+SG+ +NP NF VTLENTDTGA  +GP T+T+EP+PFNDTFTGLAPGNYQIIVTDTD+GCS+STLVFIGFSSP+IVVDNNVEATCNAGA VTVRGFGGTAPFGYAYVP G+PAPT FGT TTFEIPGPYP+DYDFYVEDANGCTALTTVTVTQEAGIP PAIDV NQCTATSGYQI+VTAP+STGSGLP+ETFMYDIGSGFQSSVNFVVPNPGSYVITIRDGNGCT T+ ADVFDFFAIT
Sbjct: 1209 VQATGGTAPYEFRLVGDPTFVLA-NVNGV-DIHDFSAVVTFGVTYFVEVRDALGCIYIEEIDPIVPPSPVTVTATSNTASCNVAGSGEITYEISGLPANPANFEVTLENTDTGATISGPTTFTNEPLPFNDTFTGLAPGNYQIIVTDTDTGCSASTLVFIGFSSPTIVVDNNVEATCNAGAFVTVRGFGGTAPFGYAYVPTGNPAPTAFGTATTFEIPGPYPADYDFYVEDANGCTALTTVTVTQEAGIPTPAIDVTNQCTATSGYQIDVTAPISTGSGLPEETFMYDIGSGFQSSVNFVVPNPGSYVITIRDGNGCTDTVTADVFDFFAIT 1538          
BLAST of mRNA_S-firma_M_contig9546.20541.1 vs. uniprot
Match: UPI0010A5B834 (T9SS type B sorting domain-containing protein n=1 Tax=Muricauda onchidii TaxID=2562684 RepID=UPI0010A5B834)

HSP 1 Score: 547 bits (1410), Expect = 8.940e-175
Identity = 271/332 (81.63%), Postives = 296/332 (89.16%), Query Frame = 1
Query:    1 IQATGGTAPYEFRLVGEPAFNPADNTPGPGDIYDFTGQVTFGVTYFVEVRDANGCTYIEEIDPITATNPVTVTANSSTASCNVAGSGGIDYEVSGISSNPGNFTVTLENTDTGAVEAGPDTYTSEPIPFNDTFTGLAPGNYQIIVTDTDSGCSSSTLVFIGFSSPSIVVDNNVEATCNAGALVTVRGFGGTAPFGYAYVPNGDPAPTVFGTDTTFEIPGPYPSDYDFYVEDANGCTALTTVTVTQEAGIPAPAIDVINQCTATSGYQINVTAPLSTGSGLPDETFMYDIGSGFQSSVNFVVPNPGSYVITIRDGNGCTATIAADVFDFFAIT 996
            ++ATGGTAPYEFRLVG+P F P   T   GD YDFTGQVTFG+TYFVEVRD  GCTYIEEIDPI ATNPV VTA ++TASCNV+G+G I+YE+SG+ +NP NF VTLENTDTGA  +GP TYT+EP+PFNDTFTGLAPGNYQIIVTDTDSGCS+ST VFIGFSSP+IVVD+NV+ATCNAGA VTVRGFGGTAPFGYAYVP GDPAPT FGTDTTFEI GPYPSDYDFYV+DANGCTALTTVTV+QE GIP P IDVINQCTATSGYQINVTAPL+TG G P+ TF YDIGSGFQ+S NFVVPNPGSY+ITIRDGNGCT TI ADVFDFFAIT
Sbjct: 1210 VRATGGTAPYEFRLVGDPTFQPG--TGVNGDEYDFTGQVTFGITYFVEVRDNLGCTYIEEIDPIAATNPVIVTATATTASCNVSGTGEINYEISGLPANPANFEVTLENTDTGANISGPTTYTNEPLPFNDTFTGLAPGNYQIIVTDTDSGCSASTRVFIGFSSPTIVVDSNVQATCNAGAFVTVRGFGGTAPFGYAYVPTGDPAPTTFGTDTTFEIAGPYPSDYDFYVQDANGCTALTTVTVSQEPGIPTPTIDVINQCTATSGYQINVTAPLTTGPG-PETTFQYDIGSGFQNSPNFVVPNPGSYIITIRDGNGCTDTITADVFDFFAIT 1538          
BLAST of mRNA_S-firma_M_contig9546.20541.1 vs. uniprot
Match: UPI00082EBF05 (T9SS type B sorting domain-containing protein n=2 Tax=unclassified Muricauda TaxID=2615049 RepID=UPI00082EBF05)

HSP 1 Score: 524 bits (1350), Expect = 1.210e-166
Identity = 256/332 (77.11%), Postives = 290/332 (87.35%), Query Frame = 1
Query:    1 IQATGGTAPYEFRLVGEPAFNPADNTPGPGDIYDFTGQVTFGVTYFVEVRDANGCTYIEEIDPITATNPVTVTANSSTASCNVAGSGGIDYEVSGISSNPGNFTVTLENTDTGAVEAGPDTYTSEPIPFNDTFTGLAPGNYQIIVTDTDSGCSSSTLVFIGFSSPSIVVDNNVEATCNAGALVTVRGFGGTAPFGYAYVPNGDPAPTVFGTDTTFEIPGPYPSDYDFYVEDANGCTALTTVTVTQEAGIPAPAIDVINQCTATSGYQINVTAPLSTGSGLPDETFMYDIGSGFQSSVNFVVPNPGSYVITIRDGNGCTATIAADVFDFFAIT 996
            ++ATGGTAPYEFRLVG+P FNPA  T G GD YDFTGQV  GVTYFVEVRDA GC Y+EEIDPI   NPV VTA ++TASCNV+GSG IDY +SG+S+ PGNFTVTL+NTDTGA+E+GP T T + IP++ TFTGLAPGNYQIIV D  +GCSSSTLVFI FSSPSI +DN VEATCNAGALVTVRGFGGT PF YAYVP GDPAPTVF ++TTFEIPGPYP+DYDFYV+DANGCTALTT+TVTQEAG+P P IDV+NQCTATSGYQI++ +PLSTGSGLP+ETF YDIGSGFQ+   F+VPNPGSYVIT+RDGNGCT T+ ADVF+FFAIT
Sbjct: 1210 VRATGGTAPYEFRLVGDPTFNPA--TSG-GDTYDFTGQVVPGVTYFVEVRDALGCIYVEEIDPIGPLNPVAVTATATTASCNVSGSGSIDYAISGVSA-PGNFTVTLQNTDTGAIESGPTTLTGQTIPYSGTFTGLAPGNYQIIVADDSTGCSSSTLVFISFSSPSITIDNFVEATCNAGALVTVRGFGGTGPFNYAYVPTGDPAPTVFASETTFEIPGPYPTDYDFYVQDANGCTALTTLTVTQEAGVPNPVIDVVNQCTATSGYQIDIVSPLSTGSGLPEETFQYDIGSGFQTGTTFIVPNPGSYVITVRDGNGCTNTVTADVFNFFAIT 1537          
BLAST of mRNA_S-firma_M_contig9546.20541.1 vs. uniprot
Match: UPI0013D8C4E8 (T9SS type B sorting domain-containing protein n=2 Tax=Flagellimonas TaxID=444459 RepID=UPI0013D8C4E8)

HSP 1 Score: 521 bits (1342), Expect = 1.480e-165
Identity = 254/332 (76.51%), Postives = 287/332 (86.45%), Query Frame = 1
Query:    1 IQATGGTAPYEFRLVGEPAFNPADNTPGPGDIYDFTGQVTFGVTYFVEVRDANGCTYIEEIDPITATNPVTVTANSSTASCNVAGSGGIDYEVSGISSNPGNFTVTLENTDTGAVEAGPDTYTSEPIPFNDTFTGLAPGNYQIIVTDTDSGCSSSTLVFIGFSSPSIVVDNNVEATCNAGALVTVRGFGGTAPFGYAYVPNGDPAPTVFGTDTTFEIPGPYPSDYDFYVEDANGCTALTTVTVTQEAGIPAPAIDVINQCTATSGYQINVTAPLSTGSGLPDETFMYDIGSGFQSSVNFVVPNPGSYVITIRDGNGCTATIAADVFDFFAIT 996
            ++A+GGTAPYEFRLVGEP FNPADN P PGD+YDF+GQV  GV YFVEVRDANGCTYIEEI PI   NPV V A +++ASC+V+G+G I YEV+GI S  GNFTVTLENTDTGA  +GP T T E +PF+D+FTGL PGNYQIIVTD D GCS STLVFIGFSSPSI++DNNV ATCNAGA VTVRGFGGTAPF YA+VP GDPAP+ F ++TTFEI GPYP DYDFYV+DANGCTALTT TVTQ+AG+P P IDV NQCTA SGYQI VTAPLSTGSGLP+ETF Y+IGSG+Q+SVNFVVPNPGSY+IT+RDGNGCT T+ ADVFDFFAI+
Sbjct: 1212 VRASGGTAPYEFRLVGEPTFNPADNAPSPGDVYDFSGQVVPGVNYFVEVRDANGCTYIEEIGPIGPANPVAVAATATSASCDVSGTGSITYEVNGIPS--GNFTVTLENTDTGATISGPTTRTGESMPFSDSFTGLPPGNYQIIVTD-DLGCSGSTLVFIGFSSPSIIIDNNVAATCNAGAFVTVRGFGGTAPFTYAFVPTGDPAPSTFASETTFEIAGPYPGDYDFYVQDANGCTALTTATVTQDAGVPTPTIDVTNQCTAVSGYQIEVTAPLSTGSGLPEETFEYNIGSGYQTSVNFVVPNPGSYIITVRDGNGCTNTVTADVFDFFAIS 1540          
BLAST of mRNA_S-firma_M_contig9546.20541.1 vs. uniprot
Match: A0A3A1NKU7_9FLAO (Two component regulator three Y domain-containing protein n=4 Tax=Muricauda TaxID=111500 RepID=A0A3A1NKU7_9FLAO)

HSP 1 Score: 516 bits (1328), Expect = 1.140e-163
Identity = 254/332 (76.51%), Postives = 288/332 (86.75%), Query Frame = 1
Query:    1 IQATGGTAPYEFRLVGEPAFNPADNTPGPGDIYDFTGQVTFGVTYFVEVRDANGCTYIEEIDPITATNPVTVTANSSTASCNVAGSGGIDYEVSGISSNPGNFTVTLENTDTGAVEAGPDTYTSEPIPFNDTFTGLAPGNYQIIVTDTDSGCSSSTLVFIGFSSPSIVVDNNVEATCNAGALVTVRGFGGTAPFGYAYVPNGDPAPTVFGTDTTFEIPGPYPSDYDFYVEDANGCTALTTVTVTQEAGIPAPAIDVINQCTATSGYQINVTAPLSTGSGLPDETFMYDIGSGFQSSVNFVVPNPGSYVITIRDGNGCTATIAADVFDFFAIT 996
            +QATGGTAPYEFRLVGEP FNPA  T G GDIYDFTGQV  GVTYFVEVRDANGCTYIEEIDPI A NPV V A ++ ASCNV+GSG ID+EVSGIS   GNFT+TL+NTDTGA+ +GP  +T E IP++ TF GLAPGNYQI+V D  +GCS STLVFIGFSSPSI +DN VEATCNAGALVTVRGFGGT PF YAYVP+G PAPTVF + TTFEIPGPYP+DYDFYV+DANGCTALTT+TVTQEAG+P P I+V+NQCTATSGYQIN+ +PLSTGSGLP+ETF Y+IGSGFQ++  F VPNPG+Y+IT+RDGNGCT T+ A+VFDFFAIT
Sbjct: 1210 VQATGGTAPYEFRLVGEPTFNPA--TSG-GDIYDFTGQVVPGVTYFVEVRDANGCTYIEEIDPIPAPNPVAVVATTTAASCNVSGSGSIDFEVSGISG-AGNFTLTLQNTDTGAIVSGPTAHTGETIPYSGTFNGLAPGNYQIVVRDDVNGCSGSTLVFIGFSSPSIAIDNFVEATCNAGALVTVRGFGGTEPFNYAYVPSGSPAPTVFASATTFEIPGPYPTDYDFYVQDANGCTALTTLTVTQEAGVPNPVINVVNQCTATSGYQINMVSPLSTGSGLPEETFQYNIGSGFQTATTFTVPNPGTYLITVRDGNGCTNTVTAEVFDFFAIT 1537          
BLAST of mRNA_S-firma_M_contig9546.20541.1 vs. uniprot
Match: UPI001411F5D6 (T9SS type B sorting domain-containing protein n=2 Tax=Muricauda TaxID=111500 RepID=UPI001411F5D6)

HSP 1 Score: 513 bits (1322), Expect = 7.380e-163
Identity = 250/332 (75.30%), Postives = 285/332 (85.84%), Query Frame = 1
Query:    1 IQATGGTAPYEFRLVGEPAFNPADNTPGPGDIYDFTGQVTFGVTYFVEVRDANGCTYIEEIDPITATNPVTVTANSSTASCNVAGSGGIDYEVSGISSNPGNFTVTLENTDTGAVEAGPDTYTSEPIPFNDTFTGLAPGNYQIIVTDTDSGCSSSTLVFIGFSSPSIVVDNNVEATCNAGALVTVRGFGGTAPFGYAYVPNGDPAPTVFGTDTTFEIPGPYPSDYDFYVEDANGCTALTTVTVTQEAGIPAPAIDVINQCTATSGYQINVTAPLSTGSGLPDETFMYDIGSGFQSSVNFVVPNPGSYVITIRDGNGCTATIAADVFDFFAIT 996
            +QA GGTAPY+FRLVG+P F PA N  G  DI+DF+  VTFGVTYFVEV D  GCTYIEEIDPI   +PV VTA ++TASCNVAGSG IDYEVSG+ +NPGNFTVTL+NTDTG   +GP  +T+  +PFNDTFTGLAPGNYQIIVTD D+GCS+S LVFIGFSSPSI +DN VEATCNAGALVTVRGFGGTAPF YAYVPNG PAPT+F  +TTFEI GPYP DYDFYV+DANGCTALTT+TVTQEAG+P P IDV+NQCTATSGYQIN+ +PL+TGSGLP++TF YDIGSGFQ+   F+VPNPGSY+IT+RDGNGC  T+ A+VFDFFAIT
Sbjct: 1209 VQAVGGTAPYQFRLVGDPVFVPA-NVNGV-DIHDFSAVVTFGVTYFVEVIDDLGCTYIEEIDPIVPPSPVNVTATATTASCNVAGSGAIDYEVSGLPANPGNFTVTLQNTDTGVTVSGPTPFTNVALPFNDTFTGLAPGNYQIIVTDDDTGCSASELVFIGFSSPSITIDNFVEATCNAGALVTVRGFGGTAPFNYAYVPNGAPAPTIFNPETTFEIAGPYPGDYDFYVQDANGCTALTTLTVTQEAGVPTPVIDVVNQCTATSGYQINMVSPLTTGSGLPEDTFQYDIGSGFQTGTTFIVPNPGSYLITVRDGNGCINTVTAEVFDFFAIT 1538          
BLAST of mRNA_S-firma_M_contig9546.20541.1 vs. uniprot
Match: UPI00110F522A (T9SS type B sorting domain-containing protein n=1 Tax=Muricauda algicola TaxID=2583815 RepID=UPI00110F522A)

HSP 1 Score: 511 bits (1316), Expect = 4.760e-162
Identity = 254/332 (76.51%), Postives = 289/332 (87.05%), Query Frame = 1
Query:    1 IQATGGTAPYEFRLVGEPAFNPADNTPGPGDIYDFTGQVTFGVTYFVEVRDANGCTYIEEIDPITATNPVTVTANSSTASCNVAGSGGIDYEVSGISSNPGNFTVTLENTDTGAVEAGPDTYTSEPIPFNDTFTGLAPGNYQIIVTDTDSGCSSSTLVFIGFSSPSIVVDNNVEATCNAGALVTVRGFGGTAPFGYAYVPNGDPAPTVFGTDTTFEIPGPYPSDYDFYVEDANGCTALTTVTVTQEAGIPAPAIDVINQCTATSGYQINVTAPLSTGSGLPDETFMYDIGSGFQSSVNFVVPNPGSYVITIRDGNGCTATIAADVFDFFAIT 996
            +QATGGTAPYEFRLVG+P F  A N  G  DI+DF+  VTFGVTYFVEVRDA GCTYIEEIDPITA +PVTVTA ++TASCNVAGSG IDYEV+GI+S P + T+TL+NTDTGA   GP  + +  IPFND+FTGLAPGNYQI+VTD ++GC+ STLVFI FSSPSIV+D+NV+ATCNAGA VTVRG G   PFGYAYVP+GDPAPTVF TDTTFEIPGPYP++YDFYV+DANGCTALTT TV+QEAG+P P IDV NQCTATSGYQI V +P+STGSGLP ET+MYDIGSG+Q+SVNFVVPNPGSYVIT+RDGNGCT T+ ADVFDFFAIT
Sbjct: 1210 VQATGGTAPYEFRLVGDPTFVLA-NVNGV-DIHDFSAVVTFGVTYFVEVRDALGCTYIEEIDPITAPSPVTVTATATTASCNVAGSGAIDYEVTGIAS-PADLTITLQNTDTGATITGPTPHNNVAIPFNDSFTGLAPGNYQILVTDNNTGCTGSTLVFIDFSSPSIVIDSNVQATCNAGAFVTVRGIGSGTPFGYAYVPSGDPAPTVFNTDTTFEIPGPYPTNYDFYVQDANGCTALTTATVSQEAGVPNPTIDVTNQCTATSGYQIEVLSPISTGSGLPHETYMYDIGSGYQTSVNFVVPNPGSYVITVRDGNGCTNTVTADVFDFFAIT 1538          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig9546.20541.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0Q1CD61_9FLAO4.330e-21397.29Two component regulator three Y domain-containing ... [more]
A0A285MY46_9FLAO4.320e-18385.54Gliding motility-associated C-terminal domain-cont... [more]
A0A5C8V0A5_9FLAO3.550e-17884.34T9SS type B sorting domain-containing protein n=1 ... [more]
UPI001683CABB1.240e-17783.73T9SS type B sorting domain-containing protein n=1 ... [more]
UPI0010A5B8348.940e-17581.63T9SS type B sorting domain-containing protein n=1 ... [more]
UPI00082EBF051.210e-16677.11T9SS type B sorting domain-containing protein n=2 ... [more]
UPI0013D8C4E81.480e-16576.51T9SS type B sorting domain-containing protein n=2 ... [more]
A0A3A1NKU7_9FLAO1.140e-16376.51Two component regulator three Y domain-containing ... [more]
UPI001411F5D67.380e-16375.30T9SS type B sorting domain-containing protein n=2 ... [more]
UPI00110F522A4.760e-16276.51T9SS type B sorting domain-containing protein n=1 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig9546contigS-firma_M_contig9546:2917..3921 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-19
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score459.1
Seed ortholog evalue1.7e-126
Seed eggNOG ortholog1250232.JQNJ01000001_gene114
EggNOG free text desc.C-terminal domain of CHU protein family
EggNOG OGs1HZK7@117743,4NFBH@976,COG2373@1,COG2373@2,COG3291@1,COG3291@2
COG Functional cat.M
Best tax levelFlavobacteriia
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons1
Model size1005
Cds size1005
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622828789.9292264-CDS-S-firma_M_contig9546:2916..39211622828789.9292264-CDS-S-firma_M_contig9546:2916..3921Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig9546 2917..3921 -
1697105163.9061997-CDS-S-firma_M_contig9546:2916..39211697105163.9061997-CDS-S-firma_M_contig9546:2916..3921Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig9546 2917..3921 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig9546.20541.1prot_S-firma_M_contig9546.20541.1Sphaerotrichia firma Sfir_13m malepolypeptideS-firma_M_contig9546 2917..3921 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-firma_M_contig9546.20541.1

>prot_S-firma_M_contig9546.20541.1 ID=prot_S-firma_M_contig9546.20541.1|Name=mRNA_S-firma_M_contig9546.20541.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=335bp
IQATGGTAPYEFRLVGEPAFNPADNTPGPGDIYDFTGQVTFGVTYFVEVR
DANGCTYIEEIDPITATNPVTVTANSSTASCNVAGSGGIDYEVSGISSNP
GNFTVTLENTDTGAVEAGPDTYTSEPIPFNDTFTGLAPGNYQIIVTDTDS
GCSSSTLVFIGFSSPSIVVDNNVEATCNAGALVTVRGFGGTAPFGYAYVP
NGDPAPTVFGTDTTFEIPGPYPSDYDFYVEDANGCTALTTVTVTQEAGIP
APAIDVINQCTATSGYQINVTAPLSTGSGLPDETFMYDIGSGFQSSVNFV
VPNPGSYVITIRDGNGCTATIAADVFDFFAITYH*
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mRNA from alignment at S-firma_M_contig9546:2917..3921-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-firma_M_contig9546.20541.1 ID=mRNA_S-firma_M_contig9546.20541.1|Name=mRNA_S-firma_M_contig9546.20541.1|organism=Sphaerotrichia firma Sfir_13m male|type=mRNA|length=1005bp|location=Sequence derived from alignment at S-firma_M_contig9546:2917..3921- (Sphaerotrichia firma Sfir_13m male)
ATACAAGCAACGGGAGGTACTGCCCCCTATGAATTTAGATTGGTAGGTGA ACCTGCTTTTAATCCAGCAGATAATACTCCTGGACCAGGGGATATTTATG ATTTTACTGGTCAGGTAACCTTTGGCGTTACCTACTTCGTTGAGGTAAGG GATGCAAATGGGTGTACTTATATTGAGGAGATAGACCCGATTACGGCAAC CAATCCGGTAACTGTTACGGCAAATTCATCCACGGCATCCTGTAATGTAG CAGGTAGTGGTGGAATTGATTATGAGGTCTCAGGAATTTCCTCAAATCCA GGAAATTTTACTGTAACGCTTGAAAATACCGATACCGGAGCAGTTGAAGC TGGTCCCGACACATATACATCCGAACCCATTCCATTTAACGATACCTTTA CGGGACTTGCACCCGGAAATTACCAAATTATAGTTACGGATACAGATTCG GGCTGTAGTTCCAGTACCTTGGTTTTTATTGGATTTAGTTCACCTTCAAT TGTTGTAGATAATAATGTAGAGGCCACCTGTAATGCTGGAGCCCTTGTAA CGGTAAGAGGATTTGGTGGAACCGCACCATTTGGATACGCCTATGTTCCA AATGGTGACCCAGCACCTACTGTTTTTGGAACAGATACCACATTTGAAAT ACCAGGACCTTATCCTTCAGATTATGACTTTTACGTAGAAGATGCCAACG GATGTACTGCCTTGACAACAGTTACCGTAACGCAAGAAGCAGGAATCCCA GCACCGGCCATAGACGTTATAAATCAATGTACAGCAACCAGTGGTTATCA AATTAATGTGACTGCCCCACTTTCTACTGGTTCAGGTCTACCAGATGAAA CCTTTATGTATGATATTGGTAGTGGTTTTCAAAGTAGTGTAAATTTTGTG GTTCCAAACCCAGGAAGTTATGTGATTACGATACGGGACGGTAATGGATG TACAGCTACTATAGCAGCTGATGTTTTTGATTTCTTTGCCATAACATATC ACTAA
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Coding sequence (CDS) from alignment at S-firma_M_contig9546:2917..3921-

>mRNA_S-firma_M_contig9546.20541.1 ID=mRNA_S-firma_M_contig9546.20541.1|Name=mRNA_S-firma_M_contig9546.20541.1|organism=Sphaerotrichia firma Sfir_13m male|type=CDS|length=2010bp|location=Sequence derived from alignment at S-firma_M_contig9546:2917..3921- (Sphaerotrichia firma Sfir_13m male)
ATACAAGCAACGGGAGGTACTGCCCCCTATGAATTTAGATTGGTAGGTGA
ACCTGCTTTTAATCCAGCAGATAATACTCCTGGACCAGGGGATATTTATG
ATTTTACTGGTCAGGTAACCTTTGGCGTTACCTACTTCGTTGAGGTAAGG
GATGCAAATGGGTGTACTTATATTGAGGAGATAGACCCGATTACGGCAAC
CAATCCGGTAACTGTTACGGCAAATTCATCCACGGCATCCTGTAATGTAG
CAGGTAGTGGTGGAATTGATTATGAGGTCTCAGGAATTTCCTCAAATCCA
GGAAATTTTACTGTAACGCTTGAAAATACCGATACCGGAGCAGTTGAAGC
TGGTCCCGACACATATACATCCGAACCCATTCCATTTAACGATACCTTTA
CGGGACTTGCACCCGGAAATTACCAAATTATAGTTACGGATACAGATTCG
GGCTGTAGTTCCAGTACCTTGGTTTTTATTGGATTTAGTTCACCTTCAAT
TGTTGTAGATAATAATGTAGAGGCCACCTGTAATGCTGGAGCCCTTGTAA
CGGTAAGAGGATTTGGTGGAACCGCACCATTTGGATACGCCTATGTTCCA
AATGGTGACCCAGCACCTACTGTTTTTGGAACAGATACCACATTTGAAAT
ACCAGGACCTTATCCTTCAGATTATGACTTTTACGTAGAAGATGCCAACG
GATGTACTGCCTTGACAACAGTTACCGTAACGCAAGAAGCAGGAATCCCA
GCACCGGCCATAGACGTTATAAATCAATGTACAGCAACCAGTGGTTATCA
AATTAATGTGACTGCCCCACTTTCTACTGGTTCAGGTCTACCAGATGAAA
CCTTTATGTATGATATTGGTAGTGGTTTTCAAAGTAGTGTAAATTTTGTG
GTTCCAAACCCAGGAAGTTATGTGATTACGATACGGGACGGTAATGGATG
TACAGCTACTATAGCAGCTGATGTTTTTGATTTCTTTGCCATAACATATC
ACTAAATACAAGCAACGGGAGGTACTGCCCCCTATGAATTTAGATTGGTA
GGTGAACCTGCTTTTAATCCAGCAGATAATACTCCTGGACCAGGGGATAT
TTATGATTTTACTGGTCAGGTAACCTTTGGCGTTACCTACTTCGTTGAGG
TAAGGGATGCAAATGGGTGTACTTATATTGAGGAGATAGACCCGATTACG
GCAACCAATCCGGTAACTGTTACGGCAAATTCATCCACGGCATCCTGTAA
TGTAGCAGGTAGTGGTGGAATTGATTATGAGGTCTCAGGAATTTCCTCAA
ATCCAGGAAATTTTACTGTAACGCTTGAAAATACCGATACCGGAGCAGTT
GAAGCTGGTCCCGACACATATACATCCGAACCCATTCCATTTAACGATAC
CTTTACGGGACTTGCACCCGGAAATTACCAAATTATAGTTACGGATACAG
ATTCGGGCTGTAGTTCCAGTACCTTGGTTTTTATTGGATTTAGTTCACCT
TCAATTGTTGTAGATAATAATGTAGAGGCCACCTGTAATGCTGGAGCCCT
TGTAACGGTAAGAGGATTTGGTGGAACCGCACCATTTGGATACGCCTATG
TTCCAAATGGTGACCCAGCACCTACTGTTTTTGGAACAGATACCACATTT
GAAATACCAGGACCTTATCCTTCAGATTATGACTTTTACGTAGAAGATGC
CAACGGATGTACTGCCTTGACAACAGTTACCGTAACGCAAGAAGCAGGAA
TCCCAGCACCGGCCATAGACGTTATAAATCAATGTACAGCAACCAGTGGT
TATCAAATTAATGTGACTGCCCCACTTTCTACTGGTTCAGGTCTACCAGA
TGAAACCTTTATGTATGATATTGGTAGTGGTTTTCAAAGTAGTGTAAATT
TTGTGGTTCCAAACCCAGGAAGTTATGTGATTACGATACGGGACGGTAAT
GGATGTACAGCTACTATAGCAGCTGATGTTTTTGATTTCTTTGCCATAAC
ATATCACTAA
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