mRNA_S-firma_M_contig9546.20538.1 (mRNA) Sphaerotrichia firma Sfir_13m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-firma_M_contig9546.20538.1
Unique NamemRNA_S-firma_M_contig9546.20538.1
TypemRNA
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Homology
BLAST of mRNA_S-firma_M_contig9546.20538.1 vs. uniprot
Match: A0A0R6MFW0_UNDPI (Photosystem I P700 chlorophyll a apoprotein A2 n=71 Tax=Stramenopiles TaxID=33634 RepID=A0A0R6MFW0_UNDPI)

HSP 1 Score: 667 bits (1721), Expect = 2.510e-236
Identity = 315/317 (99.37%), Postives = 316/317 (99.68%), Query Frame = 1
Query:    1 MVGAFAHGAIFFVRDYDPEANQDNVLARMLEHKEAIISHLSWVSLFLGFHTLGLYIHNDTVVAFGQPEKQILVEPVFAQFIQAASGKAVYGFDLLLSSKESPASVAGSEIWLPGWIEAINNDKNDLFLTIGPGDFLIHHAIALGLHTTTLILVKGALDARGSKLMPDKKDFGYSFPCDGPGRGGTCDISAWDAFYLSMFWMLNTIGWVTFYWHWKHVTIWQGNAAQFNESSNYIMGWLRDYLWLNSSPLINAYNPYGMNSLSVWAWMFLFGHLIWATGFMFLISWRGYWQELIETLVWAHERTPLANLVRWRDKPVA 951
            MVGAFAHGAIFFVRDYDPEANQDNVLARMLEHKEAIISHLSWVSLFLGFHTLGLYIHNDTVVAFGQPEKQILVEPVFAQFIQAASGKAVYGFDLLLSSKESPASVAGSEIWLPGWIEAINNDKNDLFLTIGPGDFL+HHAIALGLHTTTLILVKGALDARGSKLMPDKKDFGYSFPCDGPGRGGTCDISAWDAFYLSMFWMLNTIGWVTFYWHWKHVTIWQGNAAQFNESSNYIMGWLRDYLWLNSSPLIN YNPYGMNSLSVWAWMFLFGHLIWATGFMFLISWRGYWQELIETLVWAHERTPLANLVRWRDKPVA
Sbjct:  383 MVGAFAHGAIFFVRDYDPEANQDNVLARMLEHKEAIISHLSWVSLFLGFHTLGLYIHNDTVVAFGQPEKQILVEPVFAQFIQAASGKAVYGFDLLLSSKESPASVAGSEIWLPGWIEAINNDKNDLFLTIGPGDFLVHHAIALGLHTTTLILVKGALDARGSKLMPDKKDFGYSFPCDGPGRGGTCDISAWDAFYLSMFWMLNTIGWVTFYWHWKHVTIWQGNAAQFNESSNYIMGWLRDYLWLNSSPLINGYNPYGMNSLSVWAWMFLFGHLIWATGFMFLISWRGYWQELIETLVWAHERTPLANLVRWRDKPVA 699          
BLAST of mRNA_S-firma_M_contig9546.20538.1 vs. uniprot
Match: A0A0H5B918_9PHAE (Photosystem I (Fragment) n=1 Tax=Dictyopteris prolifera TaxID=157156 RepID=A0A0H5B918_9PHAE)

HSP 1 Score: 642 bits (1656), Expect = 5.790e-233
Identity = 299/314 (95.22%), Postives = 310/314 (98.73%), Query Frame = 1
Query:   10 AFAHGAIFFVRDYDPEANQDNVLARMLEHKEAIISHLSWVSLFLGFHTLGLYIHNDTVVAFGQPEKQILVEPVFAQFIQAASGKAVYGFDLLLSSKESPASVAGSEIWLPGWIEAINNDKNDLFLTIGPGDFLIHHAIALGLHTTTLILVKGALDARGSKLMPDKKDFGYSFPCDGPGRGGTCDISAWDAFYLSMFWMLNTIGWVTFYWHWKHVTIWQGNAAQFNESSNYIMGWLRDYLWLNSSPLINAYNPYGMNSLSVWAWMFLFGHLIWATGFMFLISWRGYWQELIETLVWAHERTPLANLVRWRDKPVA 951
            AFAHGAIFFVRDYDPE N+DNVLARMLEHKEAIISHLSWV+LFLGFHTLGLYIHNDTVVAFGQPEKQILVEPVFAQFIQAASGK++YGF+LLL+S +SPAS+AGSEIWLPGW EAINN+KNDLFLTIGPGDFL+HHAIALGLHTTTLILVKGALDARGSKLMPDKKDFGYSFPCDGPGRGGTCDISAWDAFYL+MFWMLNTIGWVTFYWHWKHVTIWQGNAA FNESSNYIMGWLRDYLWLNSSPLINAYNPYGMNSLSVWAWMFLFGHLIWATGFMFLISWRGYWQELIETLVWAHERTPLANLVRWRDKPVA
Sbjct:    1 AFAHGAIFFVRDYDPEINKDNVLARMLEHKEAIISHLSWVALFLGFHTLGLYIHNDTVVAFGQPEKQILVEPVFAQFIQAASGKSLYGFNLLLASNDSPASIAGSEIWLPGWTEAINNEKNDLFLTIGPGDFLVHHAIALGLHTTTLILVKGALDARGSKLMPDKKDFGYSFPCDGPGRGGTCDISAWDAFYLAMFWMLNTIGWVTFYWHWKHVTIWQGNAAXFNESSNYIMGWLRDYLWLNSSPLINAYNPYGMNSLSVWAWMFLFGHLIWATGFMFLISWRGYWQELIETLVWAHERTPLANLVRWRDKPVA 314          
BLAST of mRNA_S-firma_M_contig9546.20538.1 vs. uniprot
Match: A0A7T7IGM3_9STRA (Photosystem I P700 chlorophyll a apoprotein A2 n=3 Tax=Stichogloea TaxID=82160 RepID=A0A7T7IGM3_9STRA)

HSP 1 Score: 646 bits (1666), Expect = 5.560e-228
Identity = 299/317 (94.32%), Postives = 313/317 (98.74%), Query Frame = 1
Query:    1 MVGAFAHGAIFFVRDYDPEANQDNVLARMLEHKEAIISHLSWVSLFLGFHTLGLYIHNDTVVAFGQPEKQILVEPVFAQFIQAASGKAVYGFDLLLSSKESPASVAGSEIWLPGWIEAINNDKNDLFLTIGPGDFLIHHAIALGLHTTTLILVKGALDARGSKLMPDKKDFGYSFPCDGPGRGGTCDISAWDAFYLSMFWMLNTIGWVTFYWHWKHVTIWQGNAAQFNESSNYIMGWLRDYLWLNSSPLINAYNPYGMNSLSVWAWMFLFGHLIWATGFMFLISWRGYWQELIETLVWAHERTPLANLVRWRDKPVA 951
            MVGAFAHGAIFFVRDYDPEAN++NVLARMLEHKEAIISHLSWV LFLGFHTLGLYIHNDTVVAFGQPEKQILVEPVFAQFIQA+SGKA+YGFD+LL+S +SPAS AGSEIWLPGW+EAIN+DKNDLFLTIGPGDFL+HHAIALGLHTTTLILVKGALDARGSKLMPDKKDFGYSFPCDGPGRGGTCDISAWDAFYLSMFWMLNTIGWVTFYWHWKHVTIWQGNAAQFNESSNY+MGWLRDYLWLNSSPLIN YNPYGMN+LSVWAWMFLFGHL+WATGFMFLISWRGYWQELIETLVWAHERTPLANLVRW+DKPVA
Sbjct:  383 MVGAFAHGAIFFVRDYDPEANKNNVLARMLEHKEAIISHLSWVCLFLGFHTLGLYIHNDTVVAFGQPEKQILVEPVFAQFIQASSGKALYGFDVLLASPQSPASAAGSEIWLPGWLEAINSDKNDLFLTIGPGDFLVHHAIALGLHTTTLILVKGALDARGSKLMPDKKDFGYSFPCDGPGRGGTCDISAWDAFYLSMFWMLNTIGWVTFYWHWKHVTIWQGNAAQFNESSNYLMGWLRDYLWLNSSPLINGYNPYGMNNLSVWAWMFLFGHLVWATGFMFLISWRGYWQELIETLVWAHERTPLANLVRWKDKPVA 699          
BLAST of mRNA_S-firma_M_contig9546.20538.1 vs. uniprot
Match: B2XT53_HETAK (Photosystem I P700 chlorophyll a apoprotein A2 n=3 Tax=Heterosigma akashiwo TaxID=2829 RepID=B2XT53_HETAK)

HSP 1 Score: 636 bits (1641), Expect = 3.440e-224
Identity = 296/317 (93.38%), Postives = 308/317 (97.16%), Query Frame = 1
Query:    1 MVGAFAHGAIFFVRDYDPEANQDNVLARMLEHKEAIISHLSWVSLFLGFHTLGLYIHNDTVVAFGQPEKQILVEPVFAQFIQAASGKAVYGFDLLLSSKESPASVAGSEIWLPGWIEAINNDKNDLFLTIGPGDFLIHHAIALGLHTTTLILVKGALDARGSKLMPDKKDFGYSFPCDGPGRGGTCDISAWDAFYLSMFWMLNTIGWVTFYWHWKHVTIWQGNAAQFNESSNYIMGWLRDYLWLNSSPLINAYNPYGMNSLSVWAWMFLFGHLIWATGFMFLISWRGYWQELIETLVWAHERTPLANLVRWRDKPVA 951
            M+GAFAHGAIFFVRDYDPE N+DNVLARMLEHKEAIISHLSWVSLFLGFHTLGLYIHND VVAFGQPEKQILVEP+FAQ+IQAASGKA+YGFD+LLSS +SPASVA S+IWLP W+EAIN+ KN LFL IGPGDFL+HHAIALGLHTTTLILVKGALDARGSKLMPDKKDFGYSFPCDGPGRGGTCDISAWDAFYL+MFWMLNTIGWVTFYWHWKHVTIWQGNAAQFNESSNYIMGWLRDYLWLNSSPLIN YNPYGMNSLSVWAWMFLFGHLIWATGFMFLISWRGYWQELIETLVWAHERTPLANLVRWRDKPVA
Sbjct:  383 MMGAFAHGAIFFVRDYDPEVNKDNVLARMLEHKEAIISHLSWVSLFLGFHTLGLYIHNDVVVAFGQPEKQILVEPIFAQWIQAASGKALYGFDVLLSSTDSPASVASSQIWLPSWLEAINSGKNSLFLAIGPGDFLVHHAIALGLHTTTLILVKGALDARGSKLMPDKKDFGYSFPCDGPGRGGTCDISAWDAFYLAMFWMLNTIGWVTFYWHWKHVTIWQGNAAQFNESSNYIMGWLRDYLWLNSSPLINGYNPYGMNSLSVWAWMFLFGHLIWATGFMFLISWRGYWQELIETLVWAHERTPLANLVRWRDKPVA 699          
BLAST of mRNA_S-firma_M_contig9546.20538.1 vs. uniprot
Match: B7T242_VAULI (Photosystem I P700 chlorophyll a apoprotein A2 n=2 Tax=Ochrophyta TaxID=2696291 RepID=B7T242_VAULI)

HSP 1 Score: 633 bits (1632), Expect = 7.980e-223
Identity = 293/317 (92.43%), Postives = 306/317 (96.53%), Query Frame = 1
Query:    1 MVGAFAHGAIFFVRDYDPEANQDNVLARMLEHKEAIISHLSWVSLFLGFHTLGLYIHNDTVVAFGQPEKQILVEPVFAQFIQAASGKAVYGFDLLLSSKESPASVAGSEIWLPGWIEAINNDKNDLFLTIGPGDFLIHHAIALGLHTTTLILVKGALDARGSKLMPDKKDFGYSFPCDGPGRGGTCDISAWDAFYLSMFWMLNTIGWVTFYWHWKHVTIWQGNAAQFNESSNYIMGWLRDYLWLNSSPLINAYNPYGMNSLSVWAWMFLFGHLIWATGFMFLISWRGYWQELIETLVWAHERTPLANLVRWRDKPVA 951
            MVGAFAHGAIFFVRDYDPE N++NVLARMLEHKEAIISHLSWVSLFLGFHTLGLYIHNDTVVAFGQPEKQILVEPVFAQFIQAASGKA+YGFD LLS+  SPA+ A S IWLPGW++AINN+KN LFLTIGPGDFL+HHAIALGLHTTTLILVKGALDARGSKLMPDKKDFGYSFPCDGPGRGGTCDISAWDAFYLSMFWMLNTIGWVTFYWHWKHVTIWQGN AQFNESSNY+MGWLRDYLWLNSSPLIN YNPYGMN+LSVWAWMFLFGHL+WATGFMFLISWRGYWQELIETLVWAHERTPLANLV W+DKPVA
Sbjct:  383 MVGAFAHGAIFFVRDYDPEINKNNVLARMLEHKEAIISHLSWVSLFLGFHTLGLYIHNDTVVAFGQPEKQILVEPVFAQFIQAASGKAIYGFDTLLSTTNSPATAASSGIWLPGWLDAINNEKNSLFLTIGPGDFLVHHAIALGLHTTTLILVKGALDARGSKLMPDKKDFGYSFPCDGPGRGGTCDISAWDAFYLSMFWMLNTIGWVTFYWHWKHVTIWQGNPAQFNESSNYLMGWLRDYLWLNSSPLINGYNPYGMNNLSVWAWMFLFGHLVWATGFMFLISWRGYWQELIETLVWAHERTPLANLVSWKDKPVA 699          
BLAST of mRNA_S-firma_M_contig9546.20538.1 vs. uniprot
Match: A0A516Z9Y6_9STRA (Photosystem I P700 chlorophyll a apoprotein A2 n=6 Tax=cellular organisms TaxID=131567 RepID=A0A516Z9Y6_9STRA)

HSP 1 Score: 629 bits (1623), Expect = 1.850e-221
Identity = 292/317 (92.11%), Postives = 305/317 (96.21%), Query Frame = 1
Query:    1 MVGAFAHGAIFFVRDYDPEANQDNVLARMLEHKEAIISHLSWVSLFLGFHTLGLYIHNDTVVAFGQPEKQILVEPVFAQFIQAASGKAVYGFDLLLSSKESPASVAGSEIWLPGWIEAINNDKNDLFLTIGPGDFLIHHAIALGLHTTTLILVKGALDARGSKLMPDKKDFGYSFPCDGPGRGGTCDISAWDAFYLSMFWMLNTIGWVTFYWHWKHVTIWQGNAAQFNESSNYIMGWLRDYLWLNSSPLINAYNPYGMNSLSVWAWMFLFGHLIWATGFMFLISWRGYWQELIETLVWAHERTPLANLVRWRDKPVA 951
            MVGAFAHGAIFFVRDYDPE N+DNVLARMLEHKEAIISHLSWVSLFLGFHTLGLY+HNDTVVAFGQPEKQIL+EPVFAQFIQAASGKA+YGFD+LLSS  SPA+VAG+ +WLPGW EAINN+ N LFLTIGPGDFL+HHAIAL LHTTTLILVKGALDARGSKLMPDKKDFGYSFPCDGPGRGGTCDISAWDAFYLSMFWMLNTI WVTFYWHWKH+TIW GNAAQFNESSNYIMGWLRDYLWLNSSPLIN YNP+GMNS +VWAWMFLFGHLIWATGFMFLISWRGYWQELIETLVWAHERTPLANLVRWRDKPVA
Sbjct:  383 MVGAFAHGAIFFVRDYDPEMNKDNVLARMLEHKEAIISHLSWVSLFLGFHTLGLYVHNDTVVAFGQPEKQILIEPVFAQFIQAASGKALYGFDVLLSSANSPATVAGNNVWLPGWAEAINNNGNSLFLTIGPGDFLVHHAIALALHTTTLILVKGALDARGSKLMPDKKDFGYSFPCDGPGRGGTCDISAWDAFYLSMFWMLNTISWVTFYWHWKHLTIWGGNAAQFNESSNYIMGWLRDYLWLNSSPLINGYNPFGMNSQAVWAWMFLFGHLIWATGFMFLISWRGYWQELIETLVWAHERTPLANLVRWRDKPVA 699          
BLAST of mRNA_S-firma_M_contig9546.20538.1 vs. uniprot
Match: A0A8H2SIG2_9STRA (Photosystem I n=1 Tax=Nitzschia inconspicua TaxID=303405 RepID=A0A8H2SIG2_9STRA)

HSP 1 Score: 623 bits (1606), Expect = 3.750e-221
Identity = 287/317 (90.54%), Postives = 305/317 (96.21%), Query Frame = 1
Query:    1 MVGAFAHGAIFFVRDYDPEANQDNVLARMLEHKEAIISHLSWVSLFLGFHTLGLYIHNDTVVAFGQPEKQILVEPVFAQFIQAASGKAVYGFDLLLSSKESPASVAGSEIWLPGWIEAINNDKNDLFLTIGPGDFLIHHAIALGLHTTTLILVKGALDARGSKLMPDKKDFGYSFPCDGPGRGGTCDISAWDAFYLSMFWMLNTIGWVTFYWHWKHVTIWQGNAAQFNESSNYIMGWLRDYLWLNSSPLINAYNPYGMNSLSVWAWMFLFGHLIWATGFMFLISWRGYWQELIETLVWAHERTPLANLVRWRDKPVA 951
            MVGAFAHGAIFFVRDYDPE N++NVLARMLEHKEAIISHLSW SLFLGFHTLGLYIHNDTVVAFGQPEKQIL EPVFA++IQAASGKAVY F++LLSS  SPA+VAG++IWLPGW++AIN+DKNDLFLTIGPGDFL+HHAIALGLH T LILVKGALDARGSKLMPDKKDFGYSFPCDGPGRGGTCDISAWDAFYL+MFWMLNTIGWVTFYWHWKH+TIW GN  QFNESSNYIMGWLRDYLWLNSSPLIN YNP+GMN+LSVWAWMFLFGHLIWATGFMFLISWRGYWQELIETLVWAHERTPLANL+RWRDKPVA
Sbjct:  229 MVGAFAHGAIFFVRDYDPELNKNNVLARMLEHKEAIISHLSWASLFLGFHTLGLYIHNDTVVAFGQPEKQILFEPVFAEYIQAASGKAVYEFNVLLSSSTSPATVAGNQIWLPGWLDAINSDKNDLFLTIGPGDFLVHHAIALGLHVTALILVKGALDARGSKLMPDKKDFGYSFPCDGPGRGGTCDISAWDAFYLAMFWMLNTIGWVTFYWHWKHMTIWGGNPGQFNESSNYIMGWLRDYLWLNSSPLINGYNPFGMNNLSVWAWMFLFGHLIWATGFMFLISWRGYWQELIETLVWAHERTPLANLIRWRDKPVA 545          
BLAST of mRNA_S-firma_M_contig9546.20538.1 vs. uniprot
Match: A0A1X9PTV0_9RHOD (Photosystem I P700 chlorophyll a apoprotein A2 n=11 Tax=Rhodophyta TaxID=2763 RepID=A0A1X9PTV0_9RHOD)

HSP 1 Score: 624 bits (1609), Expect = 2.540e-219
Identity = 288/317 (90.85%), Postives = 303/317 (95.58%), Query Frame = 1
Query:    1 MVGAFAHGAIFFVRDYDPEANQDNVLARMLEHKEAIISHLSWVSLFLGFHTLGLYIHNDTVVAFGQPEKQILVEPVFAQFIQAASGKAVYGFDLLLSSKESPASVAGSEIWLPGWIEAINNDKNDLFLTIGPGDFLIHHAIALGLHTTTLILVKGALDARGSKLMPDKKDFGYSFPCDGPGRGGTCDISAWDAFYLSMFWMLNTIGWVTFYWHWKHVTIWQGNAAQFNESSNYIMGWLRDYLWLNSSPLINAYNPYGMNSLSVWAWMFLFGHLIWATGFMFLISWRGYWQELIETLVWAHERTPLANLVRWRDKPVA 951
            MVGAFAHGAIFFVRDYDPE N+DNVLARMLEHKEAIISHLSWVSLFLGFHTLGLYIHNDT++AFG PEKQIL+EPVFAQ+IQAASGK +YGFDLLLSS  +PA+ AGS IWLPGW+ AIN+ KN LFLTIGPGDFL+HHAIALGLHTTTLILVKGALDARGSKLMPDKKDFGYSFPCDGPGRGGTCDISAWDAFYLS+FWMLNTIGWVTFYWHWKHVTIWQG+AAQFNESS Y+MGWLRDYLWLNSSPLIN YNPYGMNSLSVWAWMFLFGHLIWATGFMFLISWRGYWQELIETL WAHERTPLANLV W+DKPVA
Sbjct:  383 MVGAFAHGAIFFVRDYDPEQNKDNVLARMLEHKEAIISHLSWVSLFLGFHTLGLYIHNDTMIAFGTPEKQILIEPVFAQWIQAASGKTLYGFDLLLSSASNPATTAGSSIWLPGWLNAINDSKNSLFLTIGPGDFLVHHAIALGLHTTTLILVKGALDARGSKLMPDKKDFGYSFPCDGPGRGGTCDISAWDAFYLSVFWMLNTIGWVTFYWHWKHVTIWQGSAAQFNESSTYLMGWLRDYLWLNSSPLINGYNPYGMNSLSVWAWMFLFGHLIWATGFMFLISWRGYWQELIETLAWAHERTPLANLVSWKDKPVA 699          
BLAST of mRNA_S-firma_M_contig9546.20538.1 vs. uniprot
Match: A0A1X9PUK7_9RHOD (Photosystem I P700 chlorophyll a apoprotein A2 n=2 Tax=Flintiella sanguinaria TaxID=101926 RepID=A0A1X9PUK7_9RHOD)

HSP 1 Score: 620 bits (1599), Expect = 8.060e-218
Identity = 285/317 (89.91%), Postives = 303/317 (95.58%), Query Frame = 1
Query:    1 MVGAFAHGAIFFVRDYDPEANQDNVLARMLEHKEAIISHLSWVSLFLGFHTLGLYIHNDTVVAFGQPEKQILVEPVFAQFIQAASGKAVYGFDLLLSSKESPASVAGSEIWLPGWIEAINNDKNDLFLTIGPGDFLIHHAIALGLHTTTLILVKGALDARGSKLMPDKKDFGYSFPCDGPGRGGTCDISAWDAFYLSMFWMLNTIGWVTFYWHWKHVTIWQGNAAQFNESSNYIMGWLRDYLWLNSSPLINAYNPYGMNSLSVWAWMFLFGHLIWATGFMFLISWRGYWQELIETLVWAHERTPLANLVRWRDKPVA 951
            MVGAFAHGAIFFVRDYDPE N DNVLARMLEHKEAIISHLSWVSLFLGFHTLGLYIHND ++AFG PEKQILVEPVFAQ+IQAASGKA+YGFD+LLSS+ S A+ AGS +WLPGW+EAIN+ KN LFLTIGPGDFL+HHAIALGLHTTTLILVKGALDARGSKLMPDKKDFGYSFPCDGPGRGGTCDISAWDAFYLS+FWMLNTIGWVTFYWHWKH+T+WQGN +QFNESS Y+MGWLRDYLWLNSSPLIN YNPYGMNSLSVW+WMFLFGHLIWATGFMFLISWRGYWQELIETL WAHERTPLANLVRW+DKPVA
Sbjct:  383 MVGAFAHGAIFFVRDYDPEQNADNVLARMLEHKEAIISHLSWVSLFLGFHTLGLYIHNDVMIAFGTPEKQILVEPVFAQWIQAASGKALYGFDVLLSSQNSVATQAGSNLWLPGWLEAINSGKNSLFLTIGPGDFLVHHAIALGLHTTTLILVKGALDARGSKLMPDKKDFGYSFPCDGPGRGGTCDISAWDAFYLSVFWMLNTIGWVTFYWHWKHITVWQGNVSQFNESSTYLMGWLRDYLWLNSSPLINGYNPYGMNSLSVWSWMFLFGHLIWATGFMFLISWRGYWQELIETLAWAHERTPLANLVRWKDKPVA 699          
BLAST of mRNA_S-firma_M_contig9546.20538.1 vs. uniprot
Match: C6KIP5_AURAN (Photosystem I P700 chlorophyll a apoprotein A2 n=14 Tax=cellular organisms TaxID=131567 RepID=C6KIP5_AURAN)

HSP 1 Score: 619 bits (1596), Expect = 2.300e-217
Identity = 284/317 (89.59%), Postives = 305/317 (96.21%), Query Frame = 1
Query:    1 MVGAFAHGAIFFVRDYDPEANQDNVLARMLEHKEAIISHLSWVSLFLGFHTLGLYIHNDTVVAFGQPEKQILVEPVFAQFIQAASGKAVYGFDLLLSSKESPASVAGSEIWLPGWIEAINNDKNDLFLTIGPGDFLIHHAIALGLHTTTLILVKGALDARGSKLMPDKKDFGYSFPCDGPGRGGTCDISAWDAFYLSMFWMLNTIGWVTFYWHWKHVTIWQGNAAQFNESSNYIMGWLRDYLWLNSSPLINAYNPYGMNSLSVWAWMFLFGHLIWATGFMFLISWRGYWQELIETLVWAHERTPLANLVRWRDKPVA 951
            M+GAFAHGAIFF+RDYDPE N+DNVLARMLEHKEAIISHLSWVSLFLGFHTLG+YIHNDTVVAFGQPEKQILVEPVFAQ+IQA+SGKA+YGF+ LLSS +SPA+VA S++WLPGW EAIN+ KN LFLTIGPGDFL+HHAIAL LHTTTLILVKGALDARGSKLMPDKKDFGYSFPCDGPGRGGTCDISAWDAFYL+ FWMLNTIGWVTFYWHWKH+T+WQGNAAQFNESSNYIMGWLRDYLWLNSSPLIN YNP GMN+L+VWAW+FLF HL+WATGFMFLISWRGYWQELIETLVWAHERTPLANLVRWRDKPVA
Sbjct:  383 MLGAFAHGAIFFIRDYDPELNKDNVLARMLEHKEAIISHLSWVSLFLGFHTLGIYIHNDTVVAFGQPEKQILVEPVFAQWIQASSGKALYGFNTLLSSGDSPATVASSQVWLPGWTEAINSGKNSLFLTIGPGDFLVHHAIALALHTTTLILVKGALDARGSKLMPDKKDFGYSFPCDGPGRGGTCDISAWDAFYLATFWMLNTIGWVTFYWHWKHITLWQGNAAQFNESSNYIMGWLRDYLWLNSSPLINGYNPMGMNNLAVWAWIFLFAHLVWATGFMFLISWRGYWQELIETLVWAHERTPLANLVRWRDKPVA 699          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig9546.20538.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0R6MFW0_UNDPI2.510e-23699.37Photosystem I P700 chlorophyll a apoprotein A2 n=7... [more]
A0A0H5B918_9PHAE5.790e-23395.22Photosystem I (Fragment) n=1 Tax=Dictyopteris prol... [more]
A0A7T7IGM3_9STRA5.560e-22894.32Photosystem I P700 chlorophyll a apoprotein A2 n=3... [more]
B2XT53_HETAK3.440e-22493.38Photosystem I P700 chlorophyll a apoprotein A2 n=3... [more]
B7T242_VAULI7.980e-22392.43Photosystem I P700 chlorophyll a apoprotein A2 n=2... [more]
A0A516Z9Y6_9STRA1.850e-22192.11Photosystem I P700 chlorophyll a apoprotein A2 n=6... [more]
A0A8H2SIG2_9STRA3.750e-22190.54Photosystem I n=1 Tax=Nitzschia inconspicua TaxID=... [more]
A0A1X9PTV0_9RHOD2.540e-21990.85Photosystem I P700 chlorophyll a apoprotein A2 n=1... [more]
A0A1X9PUK7_9RHOD8.060e-21889.91Photosystem I P700 chlorophyll a apoprotein A2 n=2... [more]
C6KIP5_AURAN2.300e-21789.59Photosystem I P700 chlorophyll a apoprotein A2 n=1... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig9546contigS-firma_M_contig9546:43..993 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-19
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score666.0
Seed ortholog evalue8.7e-189
Seed eggNOG ortholog2880.D1J7A4
Preferred namepsaB
KEGG koko:K02690
KEGG Pathwayko00195,ko01100,map00195,map01100
KEGG ModuleM00163
GOsGO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0009507,GO:0009534,GO:0009535,GO:0009536,GO:0009579,GO:0016020,GO:0016168,GO:0031976,GO:0031984,GO:0034357,GO:0042651,GO:0043167,GO:0043168,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044436,GO:0044444,GO:0044446,GO:0044464,GO:0046906,GO:0048037,GO:0055035,GO:0097159,GO:1901363
EggNOG free text desc.chlorophyll binding
EggNOG OGs28JJ8@1,2QRYE@2759
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko00194
Hectar predicted targeting categoryother localisation
Exons1
Model size951
Cds size951
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622828789.798557-CDS-S-firma_M_contig9546:42..9931622828789.798557-CDS-S-firma_M_contig9546:42..993Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig9546 43..993 +
1697105163.8705115-CDS-S-firma_M_contig9546:42..9931697105163.8705115-CDS-S-firma_M_contig9546:42..993Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig9546 43..993 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig9546.20538.1prot_S-firma_M_contig9546.20538.1Sphaerotrichia firma Sfir_13m malepolypeptideS-firma_M_contig9546 43..993 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-firma_M_contig9546.20538.1

>prot_S-firma_M_contig9546.20538.1 ID=prot_S-firma_M_contig9546.20538.1|Name=mRNA_S-firma_M_contig9546.20538.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=317bp
MVGAFAHGAIFFVRDYDPEANQDNVLARMLEHKEAIISHLSWVSLFLGFH
TLGLYIHNDTVVAFGQPEKQILVEPVFAQFIQAASGKAVYGFDLLLSSKE
SPASVAGSEIWLPGWIEAINNDKNDLFLTIGPGDFLIHHAIALGLHTTTL
ILVKGALDARGSKLMPDKKDFGYSFPCDGPGRGGTCDISAWDAFYLSMFW
MLNTIGWVTFYWHWKHVTIWQGNAAQFNESSNYIMGWLRDYLWLNSSPLI
NAYNPYGMNSLSVWAWMFLFGHLIWATGFMFLISWRGYWQELIETLVWAH
ERTPLANLVRWRDKPVA
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mRNA from alignment at S-firma_M_contig9546:43..993+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-firma_M_contig9546.20538.1 ID=mRNA_S-firma_M_contig9546.20538.1|Name=mRNA_S-firma_M_contig9546.20538.1|organism=Sphaerotrichia firma Sfir_13m male|type=mRNA|length=951bp|location=Sequence derived from alignment at S-firma_M_contig9546:43..993+ (Sphaerotrichia firma Sfir_13m male)
ATGGTTGGGGCATTTGCACATGGTGCGATTTTCTTTGTACGAGATTATGA TCCAGAAGCAAACCAAGATAATGTTTTAGCTAGAATGCTTGAACATAAGG AAGCAATTATTTCTCATTTAAGTTGGGTTAGTTTATTTTTAGGGTTCCAT ACATTAGGTTTATATATTCATAATGATACGGTAGTCGCATTTGGTCAACC AGAAAAACAAATATTAGTAGAACCTGTCTTTGCTCAATTTATTCAAGCGG CTTCTGGGAAAGCAGTATATGGATTTGATCTTTTATTATCTTCAAAAGAA AGCCCAGCTTCTGTAGCAGGTAGTGAAATATGGTTACCTGGTTGGATAGA AGCTATTAATAATGACAAAAATGATCTTTTCTTAACTATTGGGCCTGGTG ATTTTTTAATACATCACGCTATTGCTTTAGGACTACACACTACAACTTTA ATTTTAGTTAAAGGAGCATTAGATGCTCGTGGTTCGAAATTAATGCCTGA TAAAAAAGATTTTGGTTATAGTTTCCCTTGTGATGGTCCTGGCCGTGGTG GTACTTGTGATATTTCAGCTTGGGATGCTTTCTATTTATCAATGTTTTGG ATGCTAAACACGATTGGTTGGGTTACTTTTTATTGGCATTGGAAGCACGT TACAATTTGGCAGGGAAATGCTGCTCAATTTAATGAGTCTTCAAACTATA TTATGGGATGGTTACGTGATTATTTATGGTTAAATTCATCCCCATTAATT AATGCTTATAATCCTTATGGTATGAACAGTTTATCAGTCTGGGCATGGAT GTTCTTATTTGGGCATTTAATTTGGGCTACTGGATTTATGTTCTTAATAT CATGGAGAGGTTATTGGCAAGAACTTATAGAAACATTAGTTTGGGCTCAT GAACGTACTCCTCTTGCAAATTTAGTTCGTTGGCGTGATAAACCTGTAGC T
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Coding sequence (CDS) from alignment at S-firma_M_contig9546:43..993+

>mRNA_S-firma_M_contig9546.20538.1 ID=mRNA_S-firma_M_contig9546.20538.1|Name=mRNA_S-firma_M_contig9546.20538.1|organism=Sphaerotrichia firma Sfir_13m male|type=CDS|length=1902bp|location=Sequence derived from alignment at S-firma_M_contig9546:43..993+ (Sphaerotrichia firma Sfir_13m male)
ATGGTTGGGGCATTTGCACATGGTGCGATTTTCTTTGTACGAGATTATGA
TCCAGAAGCAAACCAAGATAATGTTTTAGCTAGAATGCTTGAACATAAGG
AAGCAATTATTTCTCATTTAAGTTGGGTTAGTTTATTTTTAGGGTTCCAT
ACATTAGGTTTATATATTCATAATGATACGGTAGTCGCATTTGGTCAACC
AGAAAAACAAATATTAGTAGAACCTGTCTTTGCTCAATTTATTCAAGCGG
CTTCTGGGAAAGCAGTATATGGATTTGATCTTTTATTATCTTCAAAAGAA
AGCCCAGCTTCTGTAGCAGGTAGTGAAATATGGTTACCTGGTTGGATAGA
AGCTATTAATAATGACAAAAATGATCTTTTCTTAACTATTGGGCCTGGTG
ATTTTTTAATACATCACGCTATTGCTTTAGGACTACACACTACAACTTTA
ATTTTAGTTAAAGGAGCATTAGATGCTCGTGGTTCGAAATTAATGCCTGA
TAAAAAAGATTTTGGTTATAGTTTCCCTTGTGATGGTCCTGGCCGTGGTG
GTACTTGTGATATTTCAGCTTGGGATGCTTTCTATTTATCAATGTTTTGG
ATGCTAAACACGATTGGTTGGGTTACTTTTTATTGGCATTGGAAGCACGT
TACAATTTGGCAGGGAAATGCTGCTCAATTTAATGAGTCTTCAAACTATA
TTATGGGATGGTTACGTGATTATTTATGGTTAAATTCATCCCCATTAATT
AATGCTTATAATCCTTATGGTATGAACAGTTTATCAGTCTGGGCATGGAT
GTTCTTATTTGGGCATTTAATTTGGGCTACTGGATTTATGTTCTTAATAT
CATGGAGAGGTTATTGGCAAGAACTTATAGAAACATTAGTTTGGGCTCAT
GAACGTACTCCTCTTGCAAATTTAGTTCGTTGGCGTGATAAACCTGTAGC
TATGGTTGGGGCATTTGCACATGGTGCGATTTTCTTTGTACGAGATTATG
ATCCAGAAGCAAACCAAGATAATGTTTTAGCTAGAATGCTTGAACATAAG
GAAGCAATTATTTCTCATTTAAGTTGGGTTAGTTTATTTTTAGGGTTCCA
TACATTAGGTTTATATATTCATAATGATACGGTAGTCGCATTTGGTCAAC
CAGAAAAACAAATATTAGTAGAACCTGTCTTTGCTCAATTTATTCAAGCG
GCTTCTGGGAAAGCAGTATATGGATTTGATCTTTTATTATCTTCAAAAGA
AAGCCCAGCTTCTGTAGCAGGTAGTGAAATATGGTTACCTGGTTGGATAG
AAGCTATTAATAATGACAAAAATGATCTTTTCTTAACTATTGGGCCTGGT
GATTTTTTAATACATCACGCTATTGCTTTAGGACTACACACTACAACTTT
AATTTTAGTTAAAGGAGCATTAGATGCTCGTGGTTCGAAATTAATGCCTG
ATAAAAAAGATTTTGGTTATAGTTTCCCTTGTGATGGTCCTGGCCGTGGT
GGTACTTGTGATATTTCAGCTTGGGATGCTTTCTATTTATCAATGTTTTG
GATGCTAAACACGATTGGTTGGGTTACTTTTTATTGGCATTGGAAGCACG
TTACAATTTGGCAGGGAAATGCTGCTCAATTTAATGAGTCTTCAAACTAT
ATTATGGGATGGTTACGTGATTATTTATGGTTAAATTCATCCCCATTAAT
TAATGCTTATAATCCTTATGGTATGAACAGTTTATCAGTCTGGGCATGGA
TGTTCTTATTTGGGCATTTAATTTGGGCTACTGGATTTATGTTCTTAATA
TCATGGAGAGGTTATTGGCAAGAACTTATAGAAACATTAGTTTGGGCTCA
TGAACGTACTCCTCTTGCAAATTTAGTTCGTTGGCGTGATAAACCTGTAG
CT
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