mRNA_S-firma_M_contig9544.20537.1 (mRNA) Sphaerotrichia firma Sfir_13m male
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Overview
Homology
BLAST of mRNA_S-firma_M_contig9544.20537.1 vs. uniprot
Match: A0A6H5JM82_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JM82_9PHAE) HSP 1 Score: 540 bits (1390), Expect = 1.310e-183 Identity = 341/595 (57.31%), Postives = 369/595 (62.02%), Query Frame = 1
Query: 1 DQTPTNQGLKLAKVAQDYAQQQGVPLPSLNGKDRTMNDTMPGAFGKPQSSGEGGLGSLLRTASSVLGGGGNNGFTDNGFGG------------------AAXXXXXXXGFAGMSHFAQDRGEPPQQQ-----GRFGRSNSFGGDGGXXXXXXXXXXXFSNNNSNNSFPQQ---QQQQ--HPGFGQQGF-APTTPQGFGPN-NNFATPGTFGPPTPQTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGFSGAMTTNGQP------YGWGQQXXXXX-QNPALYNGGFVSQ-----PGFAGGTQGYGQTHQRGNSGGGWGAGA---AAXXXXXXXXXXXLASTYNTAFGGGNSGSAYGFPTGMPQGYHNPAAAYGGPPLPPNPGKQGKKKNKDKNKSVVVTDQPQA--APAAVGGWLHVPAGYELPEGIPKGLEILAMVDGLMVHQEVETLEAIANAIGIGYEGNNQYKISNRSGVHVYQAVEETGFCWRCCCTQLRPVHMKVFDQTGTQVLAFQRHFRLFPCAWFEPCRENVTVFHGKKDDGKVIGRVTQSCCGGCCTPKLNILSRKGDRELIVKGPCVIGDMCGVKFDVLTDSKK 1644
D +GL+LAKVAQ YAQQQGVPLPSL+GK++TM+DTMPGAFG+ QS GGL LL ASS+L GG NG +GFG AA GF GMSH A RG RFGRSNSF G S NSF QQ QQQQ PG QQGF AP TP FGP+ F TPGTFGPPTP GFSGAMTT GQ YG GQQ Q NGGF +Q GF G+ G+GQT QRG GG + A A LASTYN+AFG + G+ QGY NP ++GGP LPP PGK GKK APA V GWL VPAGYELPEGIPKGLEILAMVDGLMVHQEVETLEAIANA+GIGYEGNNQYKISNR+GVHVYQAVE+TGFCWRCCCTQLRPVHMKV+DQTG+QVLAFQRHFRLFPCAW EPCRENVTVFHG K+DGKVIGRVTQSCCGGCCTPKLNILSRKGDREL+VKGPC+IGD CGV+FDVLTDSKK
Sbjct: 13 DMKHIRKGLELAKVAQQYAQQQGVPLPSLSGKEQTMDDTMPGAFGRTQS--RGGLDGLLERASSMLSGG--NGGGSDGFGNQGXXXXXXXXXXXXXXXQAAAAAATAAGFGGMSHLAGRRGSDXXXXXXXXXNRFGRSNSFAG------------------TSTNSFAQQPEFQQQQGRFPGQQQQGFGAPGTPMDFGPSPGGFGTPGTFGPPTP--------LGTPGFNGQQYPPPYGVMDPPQFGFSGAMTTQGQQGFGGQAYGSGQQAWAQQPQQQFNNNGGFANQMSTQQSGF--GSSGFGQTGQRGAGGGEYWNSAGVLAGAGLAGAGLGAGLASTYNSAFGXXXXXNY----AGIRQGYGNPGGSFGGPVLPPLPGK-GKKXXXXXXXXXXXXXXXXXXXAPAPVEGWLAVPAGYELPEGIPKGLEILAMVDGLMVHQEVETLEAIANAVGIGYEGNNQYKISNRAGVHVYQAVEDTGFCWRCCCTQLRPVHMKVYDQTGSQVLAFQRHFRLFPCAWCEPCRENVTVFHGPKEDGKVIGRVTQSCCGGCCTPKLNILSRKGDRELVVKGPCIIGDCCGVRFDVLTDSKK 570
BLAST of mRNA_S-firma_M_contig9544.20537.1 vs. uniprot
Match: D7G7Z9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7Z9_ECTSI) HSP 1 Score: 406 bits (1044), Expect = 1.810e-132 Identity = 280/564 (49.65%), Postives = 304/564 (53.90%), Query Frame = 1
Query: 1 DQTPTNQGLKLAKVAQDYAQQQGVPLPSLNGKDRTMNDTMPGAFGKPQSSGEGGLGSLLRTASSVLGGGGNNGFTDNGFGGAAXXXXXXXGFAGMSHFAQDRGEPPQQQGRFGRSNSFGGDGGXXXXXXXXXXXFSNNNSNNSFPQQQQQQHPGFGQQGFAPTTPQGFGPNNNFATPGTFGPPTPQTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGFSGAMTTNGQPYGWGQQXXXXX----QNPALY---NGGFVSQ-----PGFAGGTQGYGQTHQRGNSGGGWGAGA---AAXXXXXXXXXXXLASTYNTAFGGGNSGSAYGFPTGMPQGYHNPAAAYGGPPLPPNPGKQGKKKNKDKNKSVVVTDQPQA-APAAVGGWLHVPAGYELPEGIPKGLEILAMVDGLMVHQEVETLEAIANAIGIGYEGNNQYKISNRSGVHVYQAVEETGFCWRCCCTQLRPVHMKVFDQTGTQVLAFQRHFRLFPCAWFEPCRENVTVFHGKKDDGKVIGRVTQSCCGGCCTPKLNILSRKGDRELIVKGPCVIGDMCGVKFDVLTDSKK 1644
D +GL+LAKVAQ YAQQQGVPLPSL+GK++TM+DTMPGAFG+ QS GGL LL ASSVLG G NG GG XXXXXXX PP G PP GFSGAMTT GQ XXXXX Q P NGGF +Q GF G+ G+GQ QRG GG + A A LASTYN+AFG G G G+ QGY NP AYGGP LP PA V GWL +P GYELPEGIPKGLEILAMVDGLMVHQEVETLEAIANA+GIGYEGNNQYKISNR+GVHVYQAVE+TGFCWRCCCTQLRPVHMKV+DQTG+QVLAFQRHFRLFPCAWFEPCRENVTVFHG K+DGKV GRVTQSC GGCCTPKLN +RKG EL V+GP +GD G DVLTD+KK
Sbjct: 13 DMKHIRKGLELAKVAQQYAQQQGVPLPSLSGKEQTMDDTMPGAFGRTQS--RGGLDGLLERASSVLGAG-------NG-GGXXXXXXXXXXXXXXXXXXXXXQYPPAY---------------------------------------------------------------------GVMDPPQ-------------------------------FGFSGAMTTQGQQXXXXXXXXXXXXXXXQQPQQQFGNNGGFANQMSTQQSGF--GSSGFGQNGQRGAGGGEYWNSAGVLAGAGLAGAGLGAGLASTYNSAFGNGGGGGY----AGIRQGYGNPGGAYGGPALPXXXXXXXXXXXXXXXXXXXXXXXXXXPGPAPVEGWLAMPVGYELPEGIPKGLEILAMVDGLMVHQEVETLEAIANAVGIGYEGNNQYKISNRAGVHVYQAVEDTGFCWRCCCTQLRPVHMKVYDQTGSQVLAFQRHFRLFPCAWFEPCRENVTVFHGPKEDGKVFGRVTQSCWGGCCTPKLNFFTRKGAGELFVRGPGFLGDCWGGGLDVLTDTKK 460
BLAST of mRNA_S-firma_M_contig9544.20537.1 vs. uniprot
Match: A0A835Z4E1_9STRA (Scramblase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4E1_9STRA) HSP 1 Score: 142 bits (359), Expect = 2.840e-32 Identity = 71/167 (42.51%), Postives = 96/167 (57.49%), Query Frame = 1
Query: 1147 GLEILAMVDGLMVHQEVETLEAIANAIGIGYEGNNQYKISNRSGVHVYQAVEETGFCWRCCCTQLRPVHMKVFDQTGTQVLAFQRHFRLFPCAWFEPCRENVTVFHGK-----KDDGKVIGRVTQSCCGGCCTPKLNILSRKGDRELIVKGPCVIGDMCGVKFDVLT 1632
GL+ L V+ L + Q+ E LEA A+ +GYE NN+YKI + SG H+Y A+E+TG CWR CC RP +M VFD QV+ R F CA C E+V ++ GK + + +I +VTQ GG C P +N+ + G EL V GPC IG C FDV++
Sbjct: 561 GLDALLSVNQLQIKQQFEALEAALQAVSVGYESNNKYKIFDESGNHLYTAIEDTGCCWRFCCGPKRPFNMNVFDVNNEQVMTMHRRFNCCCCA-LPGCEEDVRIYSGKHAREDESNENLIAKVTQPTWGGGCHPVINMDAPNGHHELSVTGPCCIGQCCTSTFDVMS 726
BLAST of mRNA_S-firma_M_contig9544.20537.1 vs. uniprot
Match: A0A1S3H3U1_LINUN (Phospholipid scramblase n=3 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3H3U1_LINUN) HSP 1 Score: 128 bits (321), Expect = 5.640e-30 Identity = 81/190 (42.63%), Postives = 105/190 (55.26%), Query Frame = 1
Query: 1066 QPQAAPAAVGG--WLHVPAGYELPEGIPKGLEILAMVDGLMVHQEVETLEAIANAIGIGYEGNNQYKISNRSGVHVYQAVEETGFCWRCCCTQLRPVHMKVFDQTGTQVLAFQRHFRLFPCAWFEPCRENVTVFHGKKDDGKVIGRVTQSCCGGCCTPKLNILSRKGDRELIVKGPCVIGDMCG-VKFDV 1626
QP PA GG W+ PA +P+G P GLE L+M+D L+VHQ+VE LEA + YE NN+Y+I N G VY A E+T C R CC + RP +++ G +V+ R R C WF C + VTV + G+VIG V QS C PK I + +GD L ++GPCV CG V FDV
Sbjct: 10 QPGMQPAPGGGVQWMPQPA---VPQGCPPGLEYLSMIDQLLVHQQVEILEAFTD-----YETNNKYEIKNSMGQRVYFAAEDTCCCTRNCCGKERPFDIQIMTPQGHEVIHLSRPLRCDTC-WFPCCLQKVTV---EAPVGQVIGYVKQSW--SVCVPKFAICNAEGDTVLRIEGPCVPCSACGDVIFDV 185
BLAST of mRNA_S-firma_M_contig9544.20537.1 vs. uniprot
Match: UPI000C6EB49A (phospholipid scramblase 2-like isoform X1 n=2 Tax=Centruroides sculpturatus TaxID=218467 RepID=UPI000C6EB49A) HSP 1 Score: 117 bits (292), Expect = 2.540e-25 Identity = 84/230 (36.52%), Postives = 107/230 (46.52%), Query Frame = 1
Query: 949 PQGYHNPAAAYGGPPLPPNPGKQGKKKNKDKNKSVVVTDQPQAAPAAVGGWLHVPAGYELPEGIPKGLEILAMVDGLMVHQEVETLEAIANAIGIGYEGNNQYKISNRSGVHVYQAVEETGFCWRCCCTQLRPVHMKVFDQTGTQVLAFQRHFRLFPCAWFEPCRENVTVFHGKKDDGKVIGRVTQSCCGGCCTPKLNILSRKGDRELIVKGPCVIGDMCG-VKFDVLTD 1635
P GY PA +YG P G P AAP G W+ VPA P P GLE L M+D L+VHQ+VE LEA IG+E N+Y++ N G VY A E+ R CC +RP MK+ + G +VL R R C WF C + + V G VIG VTQ PK I + GD L ++GP +CG V+F VL++
Sbjct: 66 PSGYTQPAPSYGQQGFPQTGG------------------APMAAP---GSWMPVPAA---PVNCPPGLEYLTMIDQLLVHQQVELLEAF-----IGFESANKYEVKNSVGQKVYFAAEDNDCLTRNCCGPMRPFDMKILNNFGNEVLHLNRPLRCDSC-WFPCCLQKMEV---SSPPGTVIGYVTQEW--SILVPKFRIENAAGDSVLRIEGPFCTFSICGDVEFKVLSN 260
BLAST of mRNA_S-firma_M_contig9544.20537.1 vs. uniprot
Match: A0A182J931_9DIPT (Phospholipid scramblase n=1 Tax=Anopheles atroparvus TaxID=41427 RepID=A0A182J931_9DIPT) HSP 1 Score: 116 bits (290), Expect = 2.750e-25 Identity = 81/208 (38.94%), Postives = 103/208 (49.52%), Query Frame = 1
Query: 1018 GKKKNKD--KNKSVVVTDQPQAAPAAVGGWLHVPAGYELPEGIPKGLEILAMVDGLMVHQEVETLEAIANAIGIGYEGNNQYKISNRSGVHVYQAVEETGFCWRCCCTQLRPVHMKVFDQTGTQVLAFQRHFRLFPCAWFEPCRENVTVFHGKKDDGKVIGRVTQSCCGGCCTPKLNILSRKGDRELIVKGPCVIGDMCG-VKFDVLT 1632
GK+K K+ + VV A GW+ +P G P GLE L VD L+VHQ+VE LEA G+E N+Y+I N G VY AVE+TG C R CC R +KV D +VL F+R R C F C + + V G VIG V Q P+ NI + GD LI++GPC +CG VKF VL+
Sbjct: 39 GKRKRKEYVARRMAVVVWHVLEKKLANSGWMPIPQGIP---NCPPGLEYLTAVDQLLVHQQVELLEAFT-----GFETANKYEIKNTFGQKVYWAVEDTGCCNRMCCGTARAFDIKVLDNFQNEVLHFRRDLRCQSCC-FPCCLQKLEV---SSPPGTVIGTVEQKWT--LLRPEFNIKDQHGDTVLIIRGPCCQCSLCGDVKFLVLS 232
BLAST of mRNA_S-firma_M_contig9544.20537.1 vs. uniprot
Match: A0A6P5JWR7_PHACI (Phospholipid scramblase n=3 Tax=Phascolarctos cinereus TaxID=38626 RepID=A0A6P5JWR7_PHACI) HSP 1 Score: 114 bits (284), Expect = 2.670e-24 Identity = 69/188 (36.70%), Postives = 96/188 (51.06%), Query Frame = 1
Query: 1066 QPQAAPAAVGGWLHVPAGYELPEGIPKGLEILAMVDGLMVHQEVETLEAIANAIGIGYEGNNQYKISNRSGVHVYQAVEETGFCWRCCCTQLRPVHMKVFDQTGTQVLAFQRHFRLFPCAWFEPCRENVTVFHGKKDDGKVIGRVTQSCCGGCCTPKLNILSRKGDRELIVKGPCVIGDMCG-VKFDV 1626
QPQ + W P P P GLE L +D L++HQ+VE LEA+ G+E NN+Y ISN G VY AVEE C R CC LRP +K+ D TG +V+ F R FR C ++ C + + + + G IG +TQ+ PK +L+ L ++GPC++ C V FD+
Sbjct: 76 QPQPGTTQLVQWAPAPPP---PLNCPPGLEYLTQIDQLLIHQQVELLEALT-----GFETNNRYAISNSFGQRVYFAVEENDCCTRNCCGNLRPFIIKILDNTGREVITFDRPFRCVSC-FYPCCLQQLEI---QSPPGVPIGYITQNWHP--FLPKFTVLNEHHQEVLKIQGPCIVCRCCADVDFDI 249
BLAST of mRNA_S-firma_M_contig9544.20537.1 vs. uniprot
Match: A0A084W2Y4_ANOSI (Phospholipid scramblase n=1 Tax=Anopheles sinensis TaxID=74873 RepID=A0A084W2Y4_ANOSI) HSP 1 Score: 112 bits (281), Expect = 1.050e-23 Identity = 73/180 (40.56%), Postives = 92/180 (51.11%), Query Frame = 1
Query: 1096 GWLHVPAGYELPEGIPKGLEILAMVDGLMVHQEVETLEAIANAIGIGYEGNNQYKISNRSGVHVYQAVEETGFCWRCCCTQLRPVHMKVFDQTGTQVLAFQRHFRLFPCAWFEPCRENVTVFHGKKDDGKVIGRVTQSCCGGCCTPKLNILSRKGDRELIVKGPCVIGDMCG-VKFDVLT 1632
GW+ +P G P GLE L VD L+VHQ+VE LEA G+E N+Y+I N G VY AVE+TG C R CC R +KV D +VL F+R R C F C + + V G VIG V Q P+ NI + G LI++GPC +CG VKF VL+
Sbjct: 113 GWMPIPQGIP---NCPPGLEYLTAVDQLLVHQQVELLEAFT-----GFETANKYEIKNTLGQKVYWAVEDTGCCNRMCCGTARAFDIKVLDNFQNEVLHFRRDLRCQSCC-FPCCLQKLEV---SAPPGTVIGTVEQKWT--LLRPEFNIKDQNGQTVLILRGPCCQCSLCGDVKFVVLS 278
BLAST of mRNA_S-firma_M_contig9544.20537.1 vs. uniprot
Match: A0A482XBT0_LAOST (Phospholipid scramblase n=3 Tax=Delphacidae TaxID=33362 RepID=A0A482XBT0_LAOST) HSP 1 Score: 110 bits (274), Expect = 1.080e-22 Identity = 72/200 (36.00%), Postives = 101/200 (50.50%), Query Frame = 1
Query: 1054 VVTDQPQAAP-AAVGG-----WLHVPAGYELPEGIPKGLEILAMVDGLMVHQEVETLEAIANAIGIGYEGNNQYKISNRSGVHVYQAVEETGFCWRCCCTQLRPVHMKVFDQTGTQVLAFQRHFRLFPCAWFEPCRENVTVFHGKKDDGKVIGRVTQSCCGGCCTPKLNILSRKGDRELIVKGPCVIGDMCG-VKFDVLT 1632
+++ QPQ P +GG W+ VP G +P P GLE LA +D L +HQ+VE LEA+ G+E N++ + N G VY AVE++G C R CC +RP MK+ D QV+ R C F C + + VF G ++GR+ Q TP I + GD L ++GP +CG V F VL+
Sbjct: 103 IISSQPQNYPHPGMGGERPDGWMGVPGG--VPVNCPPGLEYLANIDQLFIHQKVELLEALT-----GFETANKFTVKNSLGQKVYYAVEDSGCCGRNCCGPIRPFDMKILDNYKNQVMELSRPLACQSCC-FPCCLQTMDVF---APPGNLVGRIEQEW--SILTPTFAIKNAAGDTVLKLEGPMCRFQLCGDVSFKVLS 289
BLAST of mRNA_S-firma_M_contig9544.20537.1 vs. uniprot
Match: A0A6P8ILK8_ACTTE (Phospholipid scramblase n=1 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8ILK8_ACTTE) HSP 1 Score: 107 bits (268), Expect = 2.440e-22 Identity = 66/193 (34.20%), Postives = 96/193 (49.74%), Query Frame = 1
Query: 1057 VTDQPQAAPAAVGGWLHVPAGYELPEGIPKGLEILAMVDGLMVHQEVETLEAIANAIGIGYEGNNQYKISNRSGVHVYQAVEETGFCWRCCCTQLRPVHMKVFDQTGTQVLAFQRHFRLFPCAWFEPCRENVTVFHGKKDDGKVIGRVTQSCCGGCCTPKLNILSRKGDRELIVKGPCVIGDMCG-VKFDVLT 1632
V QP A G +PA ++P P GLE L +D L++HQ+VE LEA G+E NN+Y++ N G +Y A E+T C R CC RP MK+ D +V+ R R C WF C + + V + G ++G Q C PK I + + L+++GP ++CG V+F VL+
Sbjct: 55 VAQQPGYTTAPQGQITWMPAP-QVPANCPPGLEYLTQIDQLLIHQQVELLEAFT-----GFETNNKYEVKNNMGQQIYFAAEDTDCCTRQCCGPGRPFDMKILDNYQREVIHLTRPLRCSSC-WFPCCLQEIEV---QSPPGTIVGYCAQ--LWSICIPKFAIQNANRETVLLIEGPLCQCNLCGDVEFQVLS 235 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig9544.20537.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_M_contig9544.20537.1 >prot_S-firma_M_contig9544.20537.1 ID=prot_S-firma_M_contig9544.20537.1|Name=mRNA_S-firma_M_contig9544.20537.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=548bp DQTPTNQGLKLAKVAQDYAQQQGVPLPSLNGKDRTMNDTMPGAFGKPQSSback to top mRNA from alignment at S-firma_M_contig9544:152..3801+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_M_contig9544.20537.1 ID=mRNA_S-firma_M_contig9544.20537.1|Name=mRNA_S-firma_M_contig9544.20537.1|organism=Sphaerotrichia firma Sfir_13m male|type=mRNA|length=3650bp|location=Sequence derived from alignment at S-firma_M_contig9544:152..3801+ (Sphaerotrichia firma Sfir_13m male)back to top Coding sequence (CDS) from alignment at S-firma_M_contig9544:152..3801+ >mRNA_S-firma_M_contig9544.20537.1 ID=mRNA_S-firma_M_contig9544.20537.1|Name=mRNA_S-firma_M_contig9544.20537.1|organism=Sphaerotrichia firma Sfir_13m male|type=CDS|length=3288bp|location=Sequence derived from alignment at S-firma_M_contig9544:152..3801+ (Sphaerotrichia firma Sfir_13m male)back to top |