mRNA_S-firma_M_contig954.20532.1 (mRNA) Sphaerotrichia firma Sfir_13m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_S-firma_M_contig954.20532.1
Unique Name	mRNA_S-firma_M_contig954.20532.1
Type	mRNA
Organism	Sphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)

Homology

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BLAST of mRNA_S-firma_M_contig954.20532.1 vs. uniprot
Match: D8LJ58_ECTSI (ER membrane protein complex subunit 2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ58_ECTSI)

HSP 1 Score: 432 bits (1110), Expect = 1.730e-148
Identity = 215/244 (88.11%), Postives = 230/244 (94.26%), Query Frame = 1

Query:    1 MSLKKLPELCREASGGKLGALRNLLRFLRKEKVRRPDLCLEHGKQLLAFGGSLGDELWVIHEQMVTAALDSGDLATAHEHLEVLRAKFPDSQRVRRLEGMQCEAEGSFPAAAKIYEEMLVANPANSLARKRQVAVLIAQADTAGAMKALNGYLAEFAADGEAWLQLAKLHIGALNYEAAAFCYEELVLISPSDHVVHCRLAEVYYTMGGAEDLLRARKHFSQSVDLLKAGNARGLHGLCQTCAS 732
            MSLKKLPELCREASGGKL  LR+LLRFLRKEK+RRPDLCL++GKQLL +G SLGDELWVIHEQMVTAALDSGD+ TAHEHL+VL  KFP SQRVRRLEGM+CEAEGSF AAA IYEEM+ ANPANSLARKRQVAVLIA+ DTAGA+KALNGYLAEFAADGEAWLQLAKLHIGALNY AAAFCYEELVL++PSDHVVHCRL EVYYTMGGAE+L+RARKHFSQSVDLLKAGNARGLHGLCQTCAS
Sbjct:    1 MSLKKLPELCREASGGKLSPLRDLLRFLRKEKIRRPDLCLQYGKQLLTYGRSLGDELWVIHEQMVTAALDSGDVPTAHEHLQVLTRKFPGSQRVRRLEGMRCEAEGSFAAAAAIYEEMVEANPANSLARKRQVAVLIAKGDTAGAVKALNGYLAEFAADGEAWLQLAKLHIGALNYAAAAFCYEELVLVAPSDHVVHCRLGEVYYTMGGAENLMRARKHFSQSVDLLKAGNARGLHGLCQTCAS 244

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BLAST of mRNA_S-firma_M_contig954.20532.1 vs. uniprot
Match: A0A6H5KPY1_9PHAE (ER membrane protein complex subunit 2 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPY1_9PHAE)

HSP 1 Score: 363 bits (932), Expect = 1.840e-121
Identity = 181/209 (86.60%), Postives = 195/209 (93.30%), Query Frame = 1

Query:    1 MSLKKLPELCREASGGKLGALRNLLRFLRKEKVRRPDLCLEHGKQLLAFGGSLGDELWVIHEQMVTAALDSGDLATAHEHLEVLRAKFPDSQRVRRLEGMQCEAEGSFPAAAKIYEEMLVANPANSLARKRQVAVLIAQADTAGAMKALNGYLAEFAADGEAWLQLAKLHIGALNYEAAAFCYEELVLISPSDHVVHCRLAEVYYTMGG 627
            MSLKKLPELCREASGGKL  LR+LLRFLRKE++RRPDLCL++GKQLL +G SLGDELWVIHEQMVTAALDSGD+ TAHEHL+VL  KFP SQRVRRLEGM+CEAEGSF AAA IYEEM+ ANPANSLARKRQVAVLIA+ DTAGA+KALNGYLAEFAADGEAWLQLAKLHIGALNY AAAFCYEELVL++PSDHVVHCRL EVYYTMGG
Sbjct:    1 MSLKKLPELCREASGGKLSPLRDLLRFLRKERIRRPDLCLQYGKQLLTYGRSLGDELWVIHEQMVTAALDSGDVPTAHEHLQVLTRKFPGSQRVRRLEGMRCEAEGSFAAAAAIYEEMVEANPANSLARKRQVAVLIAKGDTAGAVKALNGYLAEFAADGEAWLQLAKLHIGALNYAAAAFCYEELVLVAPSDHVVHCRLGEVYYTMGG 209

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BLAST of mRNA_S-firma_M_contig954.20532.1 vs. uniprot
Match: A0A7S2CCR7_9STRA (ER membrane protein complex subunit 2 n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CCR7_9STRA)

HSP 1 Score: 223 bits (568), Expect = 3.750e-66
Identity = 124/285 (43.51%), Postives = 173/285 (60.70%), Query Frame = 1

Query:   34 EASGGKLGALRNLLRFLRKEKVRRPDLCLEHGKQLLAFGGSLGDELWVIHEQMVTAALDSGDLATAHEHLEVLRAKFPDSQRVRRLEGMQCEAEGSFPAAAKIYEEMLVANPANSLARKRQVAVLIAQADTAGAMKALNGYLAEFAADGEAWLQLAKLHIGALNYEAAAFCYEELVLISPSDHVVHCRLAEVYYTMGGAEDLLRARKHFSQSVDLLKAGNARGLHGLCQTCASLASCKGASTMLEGKQGEVNKALHLFAATELRKAYGAGDARLASLADAVLRTQ 888
            E S   + A + LL+ +R  K+R  ++ + HG +L+    +LGDE W + EQ+  AALD  + + A   L+ L  +FP+S RV+RL G+  EA G +  A +IY+ ML  NPAN L  KRQV VL AQ     A+K LN YL +F AD  AW +LA L++    YEAAAFCYEELVL +P+ H+ HCRL E+YYT+GG + + +ARK+F+QS++L K  NAR LHGL   C +  + K  +      + +V  ALH +A+ EL K Y      L    +A+L TQ
Sbjct:   17 ERSPRSVPAAQALLKHIRMAKMRESEMVVRHGSKLVERQAALGDEYWSVLEQVFLAALDVDERSLAQTCLQALNEQFPESTRVKRLVGISREAMGKYAEAEEIYKGMLEENPANQLVLKRQVCVLKAQNKIPAAIKCLNNYLKQFQADANAWQELADLYLSVSKYEAAAFCYEELVLANPTSHINHCRLGEIYYTLGG-KHIAKARKYFAQSLELKKTNNARALHGLAACCHANTTFKDRNV-----RADVTAALHEYASEELAKLYSEQSPTLLPKVEAILETQ 295

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BLAST of mRNA_S-firma_M_contig954.20532.1 vs. uniprot
Match: A0A7S2S8F2_9STRA (ER membrane protein complex subunit 2 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S8F2_9STRA)

HSP 1 Score: 218 bits (556), Expect = 3.000e-64
Identity = 128/297 (43.10%), Postives = 181/297 (60.94%), Query Frame = 1

Query:    4 SLKKLPELCREASGGKLGALRNLLRFLRKEKVRRPDLCLEHGKQLLAFGG--SLGDELWVIHEQMVTAALDSGDLATAHEHLEVLRAKFPDSQRVRRLEGMQCEAEGSFPAAAKIYEEMLVANPANSLARKRQVAVLIAQADTAGAMKALNGYLAEFAADGEAWLQLAKLHIGALNYEAAAFCYEELVLISPSDHVVHCRLAEVYYTMGGAEDLLRARKHFSQSVDLLKAGNARGLHGLCQTCASLASCKGASTMLEGKQGEVNKALHLFAATELRKAYGA-GDARLASLADAVLRT 885
            SL+ +     +  G    A+  LL+++R  K+R   L +++GK L+  GG  +LGDE W + EQ+  AALD+ D+  A   L  L  +FPDS RV+RL GM+ EAE  + AA +IY+E+L ANPAN LA KR++ +L A      A+  LN Y+  F AD  AW +LA L++    Y++AAFCYEEL+L +P  H++HCRL E+YYT+G  E+L  ARKHF +S++L +  N R LHGL   C++LAS  G   + +     VN AL  +AA +LR  Y A  D  LA   + VL +
Sbjct:    7 SLESVTASVVKTKGRSTAAVTALLKYIRTHKLRESKLVVQYGKPLVQGGGGSALGDEKWTVLEQVFIAALDTKDMDLADACLRGLHTQFPDSARVKRLVGMKSEAERDYTAALQIYDELLEANPANQLAMKRKICILRADNKVQSAIHELNEYIKRFQADASAWQELADLYLSVAKYDSAAFCYEELILHNPMSHLLHCRLGEIYYTLG-KENLTVARKHFCKSLELKRKDNPRALHGLRSCCSALAS--GEERLADPS---VNAALSAYAARDLRDMYQATADPVLAGALETVLES 297

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BLAST of mRNA_S-firma_M_contig954.20532.1 vs. uniprot
Match: A0A7S2GPJ3_9STRA (ER membrane protein complex subunit 2 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GPJ3_9STRA)

HSP 1 Score: 213 bits (542), Expect = 1.520e-62
Identity = 120/269 (44.61%), Postives = 170/269 (63.20%), Query Frame = 1

Query:   31 REASGGKLGALRNLLRFLRKEKVRRPDLCLEHGKQLLA-FGGSLGDELWVIHEQMVTAALDSGDLATAHEHLEVLRAKFPDSQRVRRLEGMQCEAEGSFPAAAKIYEEMLVANPANSLARKRQVAVLIAQADTAGAMKALNGYLAEFAADGEAWLQLAKLHIGALNYEAAAFCYEELVLISPSDHVVHCRLAEVYYTMGGAEDLLRARKHFSQSVDLLKAGNARGLHGLCQTCASLASCKGASTMLEGKQGEVNKALHLFAATELRKAY 834
            R A  G+   + NL +FLR  K+R+    +  G+ +L  +   +GDELW + EQ++ AALD  D   + E L+ L+ KFP+S RV+RLEGMQ EA G + AA +IY++ML  NPAN+LA KRQV VL AQ +   A++ LN YL+ F AD  AW +L ++++    YEAA FCYEEL+L +P++H+ HCRL E+YYT+G  + L  ARK+F+QS+DL K GN R +HGL   C ++ +     T     + +V  AL  +A  EL   Y
Sbjct:    2 RAAETGRPAPILNLFKFLRINKLRQTRDVVRWGRVVLEKYRSHMGDELWTVLEQVMIAALDLHDTELSKECLKELQTKFPESARVKRLEGMQSEALGEWGAAKEIYKQMLEENPANTLAMKRQVCVLKAQGNYPQAIRQLNEYLSTFGADTSAWQELGEMYMAISKYEAAVFCYEELILSNPTNHIHHCRLGELYYTLG-PKHLRTARKYFAQSLDLKKDGNLRAMHGLASCCRAIMASPDRKT-----RADVTSALDDYAVGELIATY 264

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BLAST of mRNA_S-firma_M_contig954.20532.1 vs. uniprot
Match: A0A067CNU6_SAPPC (ER membrane protein complex subunit 2 n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CNU6_SAPPC)

HSP 1 Score: 210 bits (535), Expect = 2.460e-61
Identity = 121/255 (47.45%), Postives = 164/255 (64.31%), Query Frame = 1

Query:   70 LLRFLRKEKVRRPDLCLEHGKQLLAFGGSLGDELWVIHEQMVTAALDSGDLATAHEHLEVLRAKFPDSQRVRRLEGMQCEAEGSFPAAAKIYEEMLVANPANSLARKRQVAVLIAQADTAGAMKALNGYLAEFAADGEAWLQLAKLHIGALNYEAAAFCYEELVLISPSDHVVHCRLAEVYYTMGGAEDLLRARKHFSQSVDLLKAGNARGLHGLCQTCASLASCKGASTMLEGKQGEVNKALHLFAATELRKAY 834
            LL F+RKEK+R PD+ ++ G+ L+A GG LGD LW IHEQ++ AALD G +         L+ KFPDS RV RLEGM  EA+G +  A  +Y+++L  NPAN L  KRQV++L AQ  T  A+  LN  L  F  D  AW +L++L++   NY+ AAFCYEEL+L++P D + H RLAE+Y T+GG ++L  ARKHF+ ++DL  A + RGL GL    +++AS K A    E    E+N  LH FA  +LR  Y
Sbjct:   22 LLEFVRKEKLRVPDVVVKVGQALVARGG-LGDALWTIHEQVLIAALDLGAMDVVDSTFLALKNKFPDSSRVLRLEGMIFEAQGKYAQADALYKDILAKNPANMLVMKRQVSLLRAQGRTEDAITKLNALLRCFQTDAGAWCELSELYLSLGNYKHAAFCYEELILLNPLDALNHTRLAELYVTIGGLDNLRTARKHFAHALDL-NAQSTRGLVGLVMCTSAIASTKTARP--EKDDRELNARLHQFALQKLRGVY 272

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BLAST of mRNA_S-firma_M_contig954.20532.1 vs. uniprot
Match: A0A6G0WJF9_9STRA (ER membrane protein complex subunit 2 n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WJF9_9STRA)

HSP 1 Score: 209 bits (533), Expect = 5.490e-61
Identity = 120/289 (41.52%), Postives = 174/289 (60.21%), Query Frame = 1

Query:   37 ASGGKLGALRNLLRFLRKEKVRRPDLCLEHGKQLLAFGGSLGDELWVIHEQMVTAALDSGDLATAHEHLEVLRAKFPDSQRVRRLEGMQCEAEGSFPAAAKIYEEMLVANPANSLARKRQVAVLIAQADTAGAMKALNGYLAEFAADGEAWLQLAKLHIGALNYEAAAFCYEELVLISPSDHVVHCRLAEVYYTMGGAEDLLRARKHFSQSVDLLKAGNARGLHGLCQTCASLASCKGASTMLEGKQGEVNKALHLFAATELRKAYGAGDAR-LASLADAVLRTQASSF 900
            A G +  +L  LL F+RKEK+R PD+C++ G++L+A GG   D L+ ++EQ + AALD  +     + +E L++KFPDS RV+RLE M  EA G+F  A   Y++ML  NP+N L  KRQVA+  AQ     A+  LN  L  F  D  +W++LA+L++   NY  AAFC+EEL+L +P     H RLAE+Y T+GG ++L  ARKH + S++L    NAR L  L    ++LAS K     +E ++ ++NK LH  A ++L  AY       + S+AD V+     SF
Sbjct:   12 AKGDRASSL-ELLEFIRKEKIRAPDVCVKVGQKLIANGGLSADNLYTVYEQTLLAALDINEQDLVDKCIEALKSKFPDSSRVQRLELMILEARGNFSQADAFYKDMLTKNPSNMLIMKRQVAIYKAQGKIDDAIAKLNALLKNFQTDAGSWIELAELYLAGGNYVKAAFCFEELILTNPLSAFYHERLAEIYITIGGVDNLKLARKHLAHSIELNDTNNARALMALIMCTSTLASLK---LKVEKEEKDLNKRLHQLAVSKLHTAYNQNATEEVVSIADEVVAATKESF 296

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BLAST of mRNA_S-firma_M_contig954.20532.1 vs. uniprot
Match: A0A024TAX7_9STRA (ER membrane protein complex subunit 2 n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TAX7_9STRA)

HSP 1 Score: 203 bits (517), Expect = 1.300e-58
Identity = 124/289 (42.91%), Postives = 176/289 (60.90%), Query Frame = 1

Query:   37 ASGGKLGALRNLLRFLRKEKVRRPDLCLEHGKQLLAFGGSLGDELWVIHEQMVTAALDSGDLATAHEHLEVLRAKFPDSQRVRRLEGMQCEAEGSFPAAAKIYEEMLVANPANSLARKRQVAVLIAQADTAGAMKALNGYLAEFAADGEAWLQLAKLHIGALNYEAAAFCYEELVLISPSDHVVHCRLAEVYYTMGGAEDLLRARKHFSQSVDLLKAGNARGLHGLCQTCASLASCKGASTMLEGKQGEVNKALHLFAATELRKAYGA-GDARLASLADAVLRTQASSF 900
            ASG +   +  LL ++RKEK+R P + L+ GK+L+A GG   D L+ I EQ + AALD  DL   ++++ VL+ +FP+S RV RLE M  EA G +  A   Y +ML  NP+N L  KRQVA+L AQ     A++ LN  L  F  D  AW +LA LH+ A NY  AAFC+EEL+L +P +   H RLAE+Y T+GG ++L  ARKH + S++L  + NAR L  L    ++LA+ K   T  +    ++N  LH FA T+L  AYG+   + +AS+A  VL +  ++F
Sbjct:   12 ASGDRKSCV-ELLDYIRKEKIRVPAIVLKVGKKLIADGGLSSDVLYTIFEQTILAALDLHDLDVVNQYIPVLKTRFPNSSRVLRLELMALEANGKYSQADAFYRDMLQKNPSNMLVIKRQVAILKAQGKIDEAIEQLNKLLKNFQTDAGAWSELADLHVSAGNYAKAAFCFEELILTNPLNAFFHERLAEIYITIGGYDNLKVARKHLAHSLELNDSNNARALMALVVCTSNLAALK---TRADKDDRDLNLRLHQFALTKLNGAYGSQACSDVASVAQEVLDSTKAAF 296

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BLAST of mRNA_S-firma_M_contig954.20532.1 vs. uniprot
Match: A0A1V9YYF8_9STRA (ER membrane protein complex subunit 2 n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YYF8_9STRA)

HSP 1 Score: 202 bits (514), Expect = 3.400e-58
Identity = 118/277 (42.60%), Postives = 170/277 (61.37%), Query Frame = 1

Query:   70 LLRFLRKEKVRRPDLCLEHGKQLLAFGGSLGDELWVIHEQMVTAALDSGDLATAHEHLEVLRAKFPDSQRVRRLEGMQCEAEGSFPAAAKIYEEMLVANPANSLARKRQVAVLIAQADTAGAMKALNGYLAEFAADGEAWLQLAKLHIGALNYEAAAFCYEELVLISPSDHVVHCRLAEVYYTMGGAEDLLRARKHFSQSVDLLKAGNARGLHGLCQTCASLASCKGASTMLEGKQGEVNKALHLFAATELRKAYGAGDARLASLADAVLRTQASSF 900
            LL F+R+EK+R PD  ++ G+ L++ GG LGD+ W ++EQ + AALD  DL         L+ KFP+S RV RLEGM  EA+G +  A  +Y+E+L  NPAN L +KRQVA+L AQ  T  A+  LN  L  F  D   W +L+ L++   NY+ AAFCYEEL+L++P D   H RLAE+Y T+GG ++L  ARKHF+ +++L    N R L GL     ++AS K      E +  ++N  LH +A  +L+  Y   +   A+L + VL+T A++F
Sbjct:   22 LLEFIRREKLRAPDESVKVGRALISRGG-LGDQAWTVYEQTLLAALDIHDLDLVDSCFLALKKKFPESSRVLRLEGMIMEAQGKYAQADALYKEILAKNPANMLVQKRQVALLRAQGRTEDAIVKLNAVLRCFQTDAAGWCELSDLYLSLGNYKHAAFCYEELILLNPLDAFNHTRLAELYVTIGGNDNLRAARKHFAHALEL-NGNNTRSLVGLVMCTTAIASTKSGRPDKEDR--DLNSRLHQYAVAKLQGVYS--ELPTAALVNGVLQTTAATF 292

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BLAST of mRNA_S-firma_M_contig954.20532.1 vs. uniprot
Match: A0A7S2UWF6_9STRA (ER membrane protein complex subunit 2 n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UWF6_9STRA)

HSP 1 Score: 202 bits (513), Expect = 3.560e-58
Identity = 119/281 (42.35%), Postives = 159/281 (56.58%), Query Frame = 1

Query:  121 EHGKQLLAFGGSLGDELWVIHEQMVTAALDSGDLATAHEHLEVLRAKFPDSQRVRRLEGMQCEAEGSFPAAAKIYEEMLVANPANSLARKRQVAVLIAQADTAGAMKALNGYLAEFAADGEAWLQLAKLHIGALNYEAAAFCYEELVLISPSDHVVHCRLAEVYYTMGGA---------------------EDLLRARKHFSQSVDLLKAGNARGLHGLCQTCASLASCKG----ASTMLEGKQGEVNKALHLFAATELRKAYGAGDARLASLADAVLRTQ 888
            E+G  L+     +GDE W + EQ+  AALD  +   A   ++ L+ +FP S RV+RL G+Q EA+G F AA  +Y+ ML   P N+L  KR VA  +AQ   AGA++ALN YL +F AD  AW QL  LH    NYEAAAFCYEELVL  PS+ + H RLAE+YYT+G                       + L+ ARKHFS++++L ++ N R L GL   CA+L+  K     AS+       ++N ALH  AA EL+K Y      +A+ A AVL  Q
Sbjct:    1 EYGVDLIQDNAGIGDERWTVMEQVFQAALDLNNNDIAQFCIKALKVQFPSSNRVQRLVGLQHEAKGEFSAAESLYKNMLAETPTNTLVFKRLVACQVAQGKKAGAIRALNAYLNDFPADAVAWQQLGDLHCAVSNYEAAAFCYEELVLTQPSNCLFHLRLAELYYTLGSVGSAPALEGVSGXXXXXXSAQVQQLVLARKHFSRALELQRSNNPRALMGLAMACAALSGGKSTKSTASSSSAASDADLNGALHQMAAGELKKLYKKARPEVAAAASAVLDGQ 281

The following BLAST results are available for this feature:

BLAST of mRNA_S-firma_M_contig954.20532.1 vs. uniprot

BLAST of mRNA_S-firma_M_contig954.20532.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LJ58_ECTSI	1.730e-148	88.11	ER membrane protein complex subunit 2 n=1 Tax=Ecto...	[more]
A0A6H5KPY1_9PHAE	1.840e-121	86.60	ER membrane protein complex subunit 2 n=1 Tax=Ecto...	[more]
A0A7S2CCR7_9STRA	3.750e-66	43.51	ER membrane protein complex subunit 2 n=1 Tax=Flor...	[more]
A0A7S2S8F2_9STRA	3.000e-64	43.10	ER membrane protein complex subunit 2 n=1 Tax=Rhiz...	[more]
A0A7S2GPJ3_9STRA	1.520e-62	44.61	ER membrane protein complex subunit 2 n=1 Tax=Dict...	[more]
A0A067CNU6_SAPPC	2.460e-61	47.45	ER membrane protein complex subunit 2 n=2 Tax=Sapr...	[more]
A0A6G0WJF9_9STRA	5.490e-61	41.52	ER membrane protein complex subunit 2 n=1 Tax=Apha...	[more]
A0A024TAX7_9STRA	1.300e-58	42.91	ER membrane protein complex subunit 2 n=1 Tax=Apha...	[more]
A0A1V9YYF8_9STRA	3.400e-58	42.60	ER membrane protein complex subunit 2 n=1 Tax=Achl...	[more]
A0A7S2UWF6_9STRA	3.560e-58	42.35	ER membrane protein complex subunit 2 n=1 Tax=Fibr...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
S-firma_M_contig954	contig	S-firma_M_contig954:19014..25012 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 of Sphaerotrichia firma male vs UniRef90	2022-09-19
OGS1.0 of Sphaerotrichia firma Sfir_13m male	2021-02-24

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Seed ortholog score	431.4
Seed ortholog evalue	3.5e-118
Seed eggNOG ortholog	2880.D8LJ58
Preferred name	EMC2
GOs	GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005783,GO:0005789,GO:0006457,GO:0008150,GO:0009987,GO:0012505,GO:0016020,GO:0016021,GO:0016043,GO:0022406,GO:0030176,GO:0031224,GO:0031227,GO:0031984,GO:0032991,GO:0034975,GO:0042175,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0051179,GO:0051640,GO:0051641,GO:0071840,GO:0072546,GO:0098796,GO:0098827,GO:0140056,GO:1990456
EggNOG free text desc.	protein folding in endoplasmic reticulum
EggNOG OGs	KOG3060@1,KOG3060@2759
COG Functional cat.	S
Best tax level	Eukaryota
Best eggNOG OG	NA\|NA\|NA
Hectar predicted targeting category	other localisation
Ec32 ortholog description	Tetratricopeptide-like helical domain
Ec32 ortholog	Ec-02_004860.1
Exons	8
Model size	1346
Cds size	915
Stop	1
Start	1

Relationships

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622828789.3321626-UTR-S-firma_M_contig954:19013..19444	1622828789.3321626-UTR-S-firma_M_contig954:19013..19444	Sphaerotrichia firma Sfir_13m male	UTR	S-firma_M_contig954 19014..19444 -
1697105163.5701132-UTR-S-firma_M_contig954:19013..19444	1697105163.5701132-UTR-S-firma_M_contig954:19013..19444	Sphaerotrichia firma Sfir_13m male	UTR	S-firma_M_contig954 19014..19444 -

The following CDS feature(s) are a part of this mRNA:

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_S-firma_M_contig954.20532.1	prot_S-firma_M_contig954.20532.1	Sphaerotrichia firma Sfir_13m male	polypeptide	S-firma_M_contig954 19445..25012 -

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at S-firma_M_contig954:19014..25012-
coding sequence from alignment at S-firma_M_contig954:19014..25012-

protein sequence of mRNA_S-firma_M_contig954.20532.1

>prot_S-firma_M_contig954.20532.1 ID=prot_S-firma_M_contig954.20532.1|Name=mRNA_S-firma_M_contig954.20532.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=305bp
MSLKKLPELCREASGGKLGALRNLLRFLRKEKVRRPDLCLEHGKQLLAFG
GSLGDELWVIHEQMVTAALDSGDLATAHEHLEVLRAKFPDSQRVRRLEGM
QCEAEGSFPAAAKIYEEMLVANPANSLARKRQVAVLIAQADTAGAMKALN
GYLAEFAADGEAWLQLAKLHIGALNYEAAAFCYEELVLISPSDHVVHCRL
AEVYYTMGGAEDLLRARKHFSQSVDLLKAGNARGLHGLCQTCASLASCKG
ASTMLEGKQGEVNKALHLFAATELRKAYGAGDARLASLADAVLRTQASSF
SSDR*

mRNA from alignment at S-firma_M_contig954:19014..25012-

Legend: polypeptideCDSUTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_S-firma_M_contig954.20532.1 ID=mRNA_S-firma_M_contig954.20532.1|Name=mRNA_S-firma_M_contig954.20532.1|organism=Sphaerotrichia firma Sfir_13m male|type=mRNA|length=5999bp|location=Sequence derived from alignment at S-firma_M_contig954:19014..25012- (Sphaerotrichia firma Sfir_13m male)
ATGTCCTTGAAAAAGTTACCGGAGTTGTGTAGAGAAGCGTCAGGAGGCAA
GCTCGGGGCGTTGCGCAACCTTCTGCGGTTCTTGCGAAAAGAGAAGGTAT
GTACGTAGATTTTTGGCTTCACGTGTTGCGCGCCAGAGAGAGGGGGAGGA
GCACCCTGCCGATTCGAAACACTCAAAAGCATGAACCTAATCAACGAAGG
AAAGGAAGCTCGTATCAATGTCAAGGCGGCTTTTACATATTTTGCTCTTG
ACTATTTCTTTCCTCGGCCTTCCTTGCGGTGGCGGTTGTGCTCCGTGTAC
CCCAACTGCGGTAGATATCCCAGACTCCCCGTGTACTGGTGATGGGCTCT
CGACCGGGGACGTGCGGCGAGGCTCAATACACACCACGGCCTGTAGCATG
AAAATATGTCGAGACCGTCGGCTAAGTCAACGGCTACATCCATTAGGCTC
CACAGAGAAACAGCAGCAAAGGGTGTCGTGGGGTACAGCAGTAAAATGGA
TCCCCCCCAAAGGAACAACCTGCTGAGAGAGCAGAGGGCTGCAGACAGAA
GAGCACCGGCTTGCACGGTGTTGTGAGCCCCGCCCGCGTAACACTGCACT
GCTGTCGTAGTCCCAACTTCGTCGTGTCTGTATCAGCTCAGCTCCTTTGT
GAGGTGTAGACAAAAACCAATGCCTCCGACTTGCCCTCTGGCCCGCCACG
ACTCATCCCTTCATCGCTATCGAACTCCCTGATACGTGGGTCACGGCGAC
ACGAGCAAGCGCAAAACATGCCAACGATTAACGATGCTTGCTGTTGATAA
CCGGAAGAGGTGACTGCAGCCGGATTTTCGGGCCGGCGGTTGTTAGCCTC
GGTACGTCATGACGGCCGTGTGCATCCGCCGCGTAAGCTTCTCCGCGCTT
GGCAACGGCGGCGAATGCTTTCTCCGCGCTCTGACAGTTGTAGTGCTCCC
CTCGATGAGCCTTGAGAGTTGGAAACAACAACCACACCAGCACTCCATCC
CTCCCCATAAAACGATTAAATTAACATGCGGAAGGTTGTCCCTTCACGTT
CGCCCGCCAGGCTTTCGCTCTTGAGAGGAACCGGCTTGTGGGCCCTCGCG
ACGGGCTTGCAACTCCGCAGTCCGGCGCCTAAATGGAAGCAATGAGCTGC
AAGCTATCGCGGCTTCTTTCGGGCTTGGCTTGCACACCAGTTGCAGTGGC
CTGCCCACACATCCTCTCAGACCTCGTGTCCTCTTTTACTTGTCGTTCTG
ACCGCGATCTTTACTTCTAACGTACCTGGTACGTATATAGAGCGCCAAAA
CGTGACGCGTTGCCACCTGCTGTTTCGCCGCGCACTGCATGACCCCGATC
GTATCGCAGGTACGGCGGCCCGACCTCTGCCTCGAGCATGGGAAGCAGCT
GCTCGCTTTCGGGGGGAGCCTGGGGGACGAGCTGTGGGTCATCCACGAGC
AGGTGTGAGGCGACCCGACCGACAGGACAGATCGACAAAACGGTTCAGCA
ACAACCGCTTCAACCCTTACTGTAGGCGAATTTCGAGAGTAGCGTTGTTA
GGTGGTGGTTGTCGTTGCCTGCTATTCCAAGCGTGTGTATGCACGAGGTT
GTGGTTTCAGCCCATCCTCTCTCCATCCAAGGTGCGTTGAAAACCGACTG
GCTGGCTGGCTGTTTGAAAACGGCGACAGTGCGCTCACCCACGAGAGGCA
AAGGGAAGAATCCGAAACCAAGCACAGCAGCAGGGGTCCCAAAAAACGTT
ACAAGGGCGTTCTAGCGGGGGTTAGCCGGAAAGCAAGCGGTCTGAGAGAA
CGCGTTTGAACGAAAACAATACAAAAGCCAGTTCTGTTTTTTTTTTACAA
CGGAAACACTAACACTCATCAACATGCAATCAAATCACAAAAACCACGAA
CAATAATCGCGACGGCACAGATGGTGACGGCCGCGTTAGATTCGGGCGAC
CTCGCCACCGCCCACGAGCACCTGGAAGTGTTGCGGGCCAAGTTTCCGGA
CAGCCAGCGAGTGCGGCGCCTGGAGGGGATGCAGTGCGAAGCGGAGGGGA
GCTTCCCGGCGGCGGCTAAGATCTACGAGGAGATGCTGGTGGCGAACCCT
GCGAACTCGCTCGCCCGCAAGCGACAGGTGTGTGTGTCTATGTGTGTGTG
TGTGTATGTTTGTGTGTGTGCGTGTGTGTGTGTTTGTGTATGTGTGTGTG
TGTGTGTGTGTGTGTGTGCCTGTCTGTCTCTCTGTCGGGAGGTTGTTGCT
GTATGTTTTGCTATTTGACACATTCCGGGCTAGATTCGATTTGAAAGCAC
ACCTGTCGGCACGTGCAAGCGAATAAAATAGGGGTGGCGGTAAATGTACA
TTAATTACTTGGTACCCCCGTTCGCATCCTACAGTTGGTAAGAGACAAAC
CCGCGGAAAAAAAATAGTTCCCTCATGCCACGCGAAGATGTGGAGGTCGC
GTACAGCAGTAGACGTGCTCAGAGCCGTTGCCAACCGCCCCGTGTTGTTG
TTGATGTTAGTTTTCGCCCAAGGGAATTTGGCTGTTGAGGCTGGTGTGTG
GCTTGTAGCCCGGCGGGGGGTGCTTTTGTGCCGGCTCTCTCAAAGCGGCT
CTCTTTAGGCTGTGCGGCACTCTTGATGTTGCCGCGGTGGGGGAGGAAGT
GCACGAAACCAGACGCGCAGCTCGTGTTTGCTTCTTTCTACGCGATAATC
TGGTCCCCCCTCTGGCCCTCTCGGAAGAACGAAGTGGCTACCGCGGTTTT
AGCGTGATTTTTGTTTCAAGATACGAACAGCTGTTCTGTTTCGACAGCTT
TTGTTCCCTTCTTTGTCTTCTCTGCTCTTCTTTCTCTTCTCTCTTGCTGC
TCTCCACTCCTCGAAACGAAACGCACCCCCCCCCCCCCCAAAAAAAAAAA
AAAAAAAACACCGGCAACACGACACGACTCACGACAGGTGGCGGTGCTTA
TCGCCCAGGCGGACACGGCGGGGGCGATGAAGGCCCTCAACGGCTACCTG
GCGGAGTTTGCCGCCGATGGAGAGGCGTGGCTGCAGCTCGCCAAGCTGCA
CATCGGCGCCCTCAACTACGAGGTGCGCCAACGAAGCCATACCGTAGCCA
TCCTGCGTACCTGATCGGACGATTGATGATGGTTCAGGTGTTGTTGTTGT
TGTTGTTGTTGTTGTTGTTTGCTGCTGCTGCTGCTCCACCCGTCTGCGAT
TCATTTTCCTCGCTACGTATTCCGCACCACGAAAACGAAGGCCATATTAG
TCGAACGGTCATGGCGAAGTCAGCGGCAGGTAGGGGCTGGGTAGCGTCTG
GTTCGATTGAGTGAGTGATTATGTAAGCGATGGGCGAATGGATACTGTCG
ATCCGGGCTGCAGGAGCTGCGCATCAGTTTTGTCGCGAAACCAGGTGTAT
AGAAGGAGTGCCTGGAGGAGCTTTAGCAGAACCACTCTTCGCGCAGGCTG
TGGAAAGGGGTGAAGGTTGAGGGTTTTGTGTAGGTTGAAGTTCCCCCAGG
TATCCAGGTTTACAGGAGACTATTGTCGTAGTAGCACAAGAGCAAGCCTT
CGCGCCGGGTGTGGTGCGGACGACACGTTGATATGGGTGTTGGTGCCGAT
TAAAGTTCCCATTGGACCCAAAGAAGGAAGCTTTTGTGTTTTGCATCTTC
TTCGCGGTCAGTCCTGCGAAAGCCATCCTGGTTCGATCCAGGCTTGTCTC
ATGGGACTGGCTCACTTTGGGAAAATATGAAAATTCAAAATTCAGGGTGC
TCCTCGGTATCGCTTTTTTGGGCGGTACAAGTTTAGGCGGACCGCAACAT
GACGGGAATTGAAAATATGGAAGTATAAGCACCAAGAGGTCAATCGTGAA
TTGAGTCCTCCGAATACTGTGGAAGGCGGGCGGCACAGATTGAACCTAGA
GCTCACATTTTGTGTACTAGACGGCCAAGCAGGCTGTGATCAACGGGCCA
CCCTCACCATTCCCTCTTCGCACGTAACCCCGCCCCCGGCACCCAACGCT
GGCCTGGGATTTCCGCAGGCGGCGGCGTTTTGCTACGAGGAGCTGGTGTT
GATTTCACCGTCGGACCATGTGGTGCACTGCCGCCTAGCGGAGGTGTACT
ACACGATGGGAGGTAGGTTGCCTTGCTGCTGTAGTCCACATCGTTGTTTT
TGGGTTTTTCCTCTTCTGTCTGTCTGTCTGTCTGTCTGTCTGCCTGTCCG
CCTGTTTCTCTTCTCTTGCTCTGTGTCTGCGTGCTCGTCGTTGTACATAC
GTCCACGAAGGTTTGTTGGTCATGTCGCTCTTTGTCCAACTCGTACTTCA
AAAATCGAGTACCCCCCCCCCCCCCCCCGTGCTGCGTGCCTCTCCAGATG
CGTGATCAAACGACTTAAAAGACTGCTTGAACGCGCTCCCCCCGAGCCCT
CGATGAGTTCGTTCCAAACGATTACGATGCCCCCCAACCCATTTGGTTCG
CAACACCTTCAGGTGCGGAGGACCTCTTGCGCGCTCGAAAACACTTCTCC
CAGTCGGTCGACCTGCTCAAGGCCGGCAACGCTCGAGGGCTCCACGGGCT
TTGTCAGACCTGCGCGTCGCTCGCTTCGTGCAAGGTGCGCGTGTTTTAAC
GTGAATGGGATGTTTGGCGCAGGTTGTGGCGTGTGTGTGTCGTTTTGTCA
TTCATGGGGGAAGGAGTTCGACGAGGAGGGAGGCGAAGGAGTGGTGGGGG
CTCTTGGCGTTCTTTGAGGGAGGAGAACGGTTGCGCTTCGACCTCTTTTT
GTTGCTGTTCGTGGTGGTGAGTGTGTTGTTGCTGCTTGGCGGTGTGAAAC
CGGCTACTTGTGGCGGAGACGGAGGCTGGTACAACGTGTATTGCGAAACT
TGCCCCCCTGTCCCCGACATTCTGTCTTGAGTTGGGGTGATGCGGTTCGG
AGAACGCTCGCTGCCTGCTGCAGTGCCCTGCCTTTTATTGTCTTCCTTTT
TTGTCTGTTTTTGTGGTCGCCGTCCGTGCCGCCGTTCCCAACCAACCCCC
TCCCGAACAATCCGAACGAACCGCCCGGCCGCTGCGCTGTTGCTGTTACG
TTAGGGTGCGAGCACGATGCTGGAGGGCAAGCAAGGGGAGGTAAACAAGG
CACTGCACCTGTTCGCGGCGACGGAGCTTCGCAAGGCGTACGGTGCGGGG
GATGCTCGGCTTGCCTCTCTGGGTGAGCTGTTGCCACCGCGCGTCGGAAC
AGCGAGAGCAACTGCTGTCGCTTCCGGCGCGGGTGCTGCTGCACCAAGCG
CGTTTTTTTACCCCCGAGTACCGGTAGAGTTTTGTCGACGTCGTCCGTTG
TTTTCCGGCGTGATCACGGGAAATGGTGTGTTTCTCCATGGCGTTTTTGT
TTTCACGTTGACGAACACGCTTGGGAAAAGCATGCATAGCAGGAGCTGTA
TTGTACCAAGTTGCTGCTGCCTGCCATCGCGGCGATGCTCCTGTTCATCG
CTCCCCCCCCGTCTCCCCCCCCCTCGCGCCGCAATCCTCTCGCGTGCTTG
ACGTTCGTGCCTTCGCAGCCGACGCTGTTCTCAGGACACAAGCGTCGTCC
TTTTCGTCAGATCGATAGACAGATCTTGATGGTTTCATGTTTGCGTGTGC
AAGCCAAGAGGCCGCGGGGGCGCCGTGCATTTCATGGGGGGCGGGTATCT
TCTCGGCAGGAGGAAGCGTCCCAGCATCGCTCGCCGGAACAGCGCCTACG
TATGTAGAAGTTAGTCAGATGCAACATCATTGCTCTACCTGATGTGTTGA
TGCTGTGACGTTTCGAGAGTAATGCCAATCTGGGCCGAAGGGGGGGGGAG
GGAGGACGGAAGAGGAGCAAAAGGATTTCAACTATTGTATCCGGCCGGCA
GCAGCCGACGTTTTTTTTGTGTCTCAGCTGGTCGATGCGGGTGGTGGCGT
GTGTTTGTTGCTTGTCTCTCGTGGTTGGCATCGCGATTTGTCGGTCTCGG
TCGACAAAAAAGCCACGCAAGCTTGGTGCGTCTGCCTGTTCCACGTCAC

Coding sequence (CDS) from alignment at S-firma_M_contig954:19014..25012-

>mRNA_S-firma_M_contig954.20532.1 ID=mRNA_S-firma_M_contig954.20532.1|Name=mRNA_S-firma_M_contig954.20532.1|organism=Sphaerotrichia firma Sfir_13m male|type=CDS|length=1830bp|location=Sequence derived from alignment at S-firma_M_contig954:19014..25012- (Sphaerotrichia firma Sfir_13m male)
ATGTCCTTGAAAAAGTTACCGGAGTTGTGTAGAGAAGCGTCAGGAGGCAA
GCTCGGGGCGTTGCGCAACCTTCTGCGGTTCTTGCGAAAAGAGAAGATGT
CCTTGAAAAAGTTACCGGAGTTGTGTAGAGAAGCGTCAGGAGGCAAGCTC
GGGGCGTTGCGCAACCTTCTGCGGTTCTTGCGAAAAGAGAAGGTACGGCG
GCCCGACCTCTGCCTCGAGCATGGGAAGCAGCTGCTCGCTTTCGGGGGGA
GCCTGGGGGACGAGCTGTGGGTCATCCACGAGCAGGTACGGCGGCCCGAC
CTCTGCCTCGAGCATGGGAAGCAGCTGCTCGCTTTCGGGGGGAGCCTGGG
GGACGAGCTGTGGGTCATCCACGAGCAGATGGTGACGGCCGCGTTAGATT
CGGGCGACCTCGCCACCGCCCACGAGCACCTGGAAGTGTTGCGGGCCAAG
TTTCCGGACAGCCAGCGAGTGCGGCGCCTGGAGGGGATGCAGTGCGAAGC
GGAGGGGAGCTTCCCGGCGGCGGCTAAGATCTACGAGGAGATGCTGGTGG
CGAACCCTGCGAACTCGCTCGCCCGCAAGCGACAGATGGTGACGGCCGCG
TTAGATTCGGGCGACCTCGCCACCGCCCACGAGCACCTGGAAGTGTTGCG
GGCCAAGTTTCCGGACAGCCAGCGAGTGCGGCGCCTGGAGGGGATGCAGT
GCGAAGCGGAGGGGAGCTTCCCGGCGGCGGCTAAGATCTACGAGGAGATG
CTGGTGGCGAACCCTGCGAACTCGCTCGCCCGCAAGCGACAGGTGGCGGT
GCTTATCGCCCAGGCGGACACGGCGGGGGCGATGAAGGCCCTCAACGGCT
ACCTGGCGGAGTTTGCCGCCGATGGAGAGGCGTGGCTGCAGCTCGCCAAG
CTGCACATCGGCGCCCTCAACTACGAGGTGGCGGTGCTTATCGCCCAGGC
GGACACGGCGGGGGCGATGAAGGCCCTCAACGGCTACCTGGCGGAGTTTG
CCGCCGATGGAGAGGCGTGGCTGCAGCTCGCCAAGCTGCACATCGGCGCC
CTCAACTACGAGGCGGCGGCGTTTTGCTACGAGGAGCTGGTGTTGATTTC
ACCGTCGGACCATGTGGTGCACTGCCGCCTAGCGGAGGTGTACTACACGA
TGGGAGGCGGCGGCGTTTTGCTACGAGGAGCTGGTGTTGATTTCACCGTC
GGACCATGTGGTGCACTGCCGCCTAGCGGAGGTGTACTACACGATGGGAG
GTGCGGAGGACCTCTTGCGCGCTCGAAAACACTTCTCCCAGTCGGTCGAC
CTGCTCAAGGCCGGCAACGCTCGAGGGCTCCACGGGCTTTGTCAGACCTG
CGCGTCGCTCGCTTCGTGCAAGGTGCGGAGGACCTCTTGCGCGCTCGAAA
ACACTTCTCCCAGTCGGTCGACCTGCTCAAGGCCGGCAACGCTCGAGGGC
TCCACGGGCTTTGTCAGACCTGCGCGTCGCTCGCTTCGTGCAAGGGTGCG
AGCACGATGCTGGAGGGCAAGCAAGGGGAGGTAAACAAGGCACTGCACCT
GTTCGCGGCGACGGAGCTTCGCAAGGCGTACGGTGCGGGGGATGCTCGGC
TTGCCTCTCTGGGGTGCGAGCACGATGCTGGAGGGCAAGCAAGGGGAGGT
AAACAAGGCACTGCACCTGTTCGCGGCGACGGAGCTTCGCAAGGCGTACG
GTGCGGGGGATGCTCGGCTTGCCTCTCTGGCCGACGCTGTTCTCAGGACA
CAAGCGTCGTCCTTTTCGTCAGATCGATAGCCGACGCTGTTCTCAGGACA
CAAGCGTCGTCCTTTTCGTCAGATCGATAG