mRNA_S-firma_M_contig953.20520.1 (mRNA) Sphaerotrichia firma Sfir_13m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-firma_M_contig953.20520.1
Unique NamemRNA_S-firma_M_contig953.20520.1
TypemRNA
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Homology
BLAST of mRNA_S-firma_M_contig953.20520.1 vs. uniprot
Match: D7G484_ECTSI (Lysophospholipase l2 pldb, hydrolase of alpha/beta superfamily n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G484_ECTSI)

HSP 1 Score: 434 bits (1117), Expect = 2.510e-148
Identity = 244/358 (68.16%), Postives = 266/358 (74.30%), Query Frame = 1
Query:   94 LQEALARCEVILRAGE----AAGIEQASGKTSAVAPLASENVDSSKSSGPLDGLRRFSRDGADGVFMGAAGVPVRYRLFPKYSPEEEGS--KLRPGVVLLTGLMESMVKYGETIAHLNDRGFSVYTYDHHGQGLSGRLPVPDSADTTVAHITDFDHYVQDLVQFSKVVLPAMVPLHLHRDESGSRGGGGEAAIADVVGESSSLPLENGD--GDGGP---LKLSVIAHSMGGLVAVKAALEEPLLFEGMVLAAPMLAPNTGKLSNGIVGAVAWVATKLA-QGHRSPIRRPARATMEWSKVTHDRRRLRLWETLRGEVSCVLQRGPSFAWLSQAVRASKRGRRRLGDLSVPVLVLEAGLD 1131
            L++ LA+CE    AG       G   +S   S  A  A      S  S PL+GLRRFSRDG DGVFMGAAGVPVRYRLFPKYS  E     KL+PGV+LLTGLMESM KYGETIAHLNDRGFSVYTYDHHGQGLSGRLPVPD AD TVAHITDFDHYVQDL +FSKV+LPA V     RD SG    GG+         S   P+ NG+  G   P   L LSV+AHSMGGL+AV AAL EP LF+G+VLAAPMLAPNTGKL NG+VGA+ WV TKL  QGHRSPIRRPARATMEWS+VTHD+ RLRLWETLRG V CVLQRGPSFAWLS++V ASKR R RL  LSVPVLVLEAGLD
Sbjct:    2 LRQVLAQCEAAFLAGTEDATTPGSVPSSSSASETAAAAPGPKQLSAKSAPLEGLRRFSRDGTDGVFMGAAGVPVRYRLFPKYSKGEGDGCGKLQPGVILLTGLMESMTKYGETIAHLNDRGFSVYTYDHHGQGLSGRLPVPDGADPTVAHITDFDHYVQDLERFSKVILPATVR---PRDASGGTRTGGQGTAG-----SGDSPVVNGEPLGCDAPFPALSLSVVAHSMGGLIAVNAALREPELFDGLVLAAPMLAPNTGKLPNGVVGALTWVVTKLGRQGHRSPIRRPARATMEWSRVTHDKERLRLWETLRGTVGCVLQRGPSFAWLSKSVLASKRARGRLHQLSVPVLVLEAGLD 351          
BLAST of mRNA_S-firma_M_contig953.20520.1 vs. uniprot
Match: A0A6H5KMI3_9PHAE (Hydrolase_4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMI3_9PHAE)

HSP 1 Score: 229 bits (585), Expect = 8.100e-71
Identity = 130/197 (65.99%), Postives = 145/197 (73.60%), Query Frame = 1
Query:  529 TDFDHYVQDLVQFSKVVLPAMVPLHLHRDESGSRGGGGEAAIADVVGESSSLPLENG-----DGDGGPLKLSVIAHSMGGLVAVKAALEEPLLFEGMVLAAPMLAPNTGKLSNGIVGAVAWVATKLA-QGHRSPIRRPARATMEWSKVTHDRRRLRLWETLRGEVSCVLQRGPSFAWLSQAVRASKRGRRRLGDLSV 1101
            +DFDHYVQDLV+FSKV+LPA V     RD SG  G             S   P+ NG     DG    L LSV+AHSMGGL+AV AAL EP LF+G+VLAAPMLAP TGKL NG+VGA+AWV TKL  QGHRSPIRRPARA+MEWS+VTHD+ RLRLWETLRG V CVLQRGPSFAWLS++V ASKR R RL  LSV
Sbjct:    3 SDFDHYVQDLVRFSKVILPATVR---PRDASGGTG-----TXXXXXXXSGDPPVVNGELLGSDGTLPALSLSVVAHSMGGLIAVNAALREPELFDGLVLAAPMLAPTTGKLPNGVVGALAWVVTKLGRQGHRSPIRRPARASMEWSRVTHDKERLRLWETLRGIVGCVLQRGPSFAWLSKSVVASKRARGRLHQLSV 191          
BLAST of mRNA_S-firma_M_contig953.20520.1 vs. uniprot
Match: A0A0G4ERV7_VITBC (Hydrolase_4 domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4ERV7_VITBC)

HSP 1 Score: 128 bits (321), Expect = 3.230e-29
Identity = 105/305 (34.43%), Postives = 140/305 (45.90%), Query Frame = 1
Query:  238 GLRRFSRDGADGVFMGAAGVPVRYRLFPKYSPEEEGSKLRPGVVLLTGLMESMVKYGETIAHLNDRGFSVYTYDHHGQGLSGRLPVPDSADTTVAHITDFDHYVQDLVQFSKVVLPAMVPLHLHRDESGSRGGGGEAAIADVVGESSSLPLENGDGDGGPLKLSVIAHSMG---GLVAV---KAALEEPLLFEGMVLAAPMLAPNTGKLSNGIVGAVAWVATKLAQGHRSPIR-RPARATMEWSKVTHDRRRLRLWETLRGEVSCVLQRGPSFAWLSQAVRASKRGRRRLGDLSVPVLVLEAGLD 1131
            G+  F R G  G F GA GV + YR FP Y  + EG+ L PGVV+ TG  E  VKYGE I  L   GFSV+T+DH  QGLSG           + H+  F HY  DL  F   V+ A  P H                 +  +  +   P            L  +AHSMG   GLVA    K +     LF  M L+APMLA  T    N     +A +A    +  RSP+   P       +++THD  R   WE +RG +   + RGPSF W+ + ++A  R +++      P +V  AG+D
Sbjct:  157 GITFFVRHGRHGSFRGANGVRIVYRAFPHY--DSEGALL-PGVVVATGWSECHVKYGELIRDLYRAGFSVFTFDHRCQGLSGHEL--GEGRPWITHVERFHHYTDDLTTFVNEVVKA-TPTHR----------------SPAIARTRPAP-----------PLFYVAHSMGAFIGLVAQHNSKQSDPPSPLFCRMALSAPMLAMKTPAGPNRFAIWLARIAILAGRKIRSPLGDHPVENPELGARITHDDDRKSAWERMRGMLPRTMIRGPSFNWIKEGMKAGFRFKKQWRRFDTPTVVFLAGID 428          
BLAST of mRNA_S-firma_M_contig953.20520.1 vs. uniprot
Match: A0A1L4D1T5_9PROT (Hydrolase_4 domain-containing protein n=1 Tax=Silvanigrella aquatica TaxID=1915309 RepID=A0A1L4D1T5_9PROT)

HSP 1 Score: 101 bits (252), Expect = 1.410e-20
Identity = 90/303 (29.70%), Postives = 135/303 (44.55%), Query Frame = 1
Query:  250 FSRDGADGVFMGAAGVPVRYRLFPKYSPEEEGSKLRPGVVLLTGLMESMVKYGETIAHLNDRGFSVYTYDHHGQGLSGRLPVPDSADTTVAHITDFDHYVQDLVQFSKVVLPAMVPLHLHRDESGSRGGGGEAAIADVVGESSSLPLENGDGDGGPLKLSVIAHSMGGLVAVKAALEEPLLFEGMVLAAPM----LAPNTGKLSNGIVGAVAWV-----ATKLAQGHRSPIRRPARATMEWSKVTHDRRRLRLWETLRGEVSCVLQRGPSFAWLSQAVRASKRGRRRLGDLSVPVLVLEAGLD 1131
            +   G    F+G A V +  R F   +   +       ++L TG  ES +KY E I +L + GFSVY YDH GQG SGR    +       ++  F++YV DL  F + V             SGS              + + LP+              IAHSMGG +   A  E+ +   G++L+APM    L P    L   + G ++ +     A K A G    I  P R   E + VTH + R  +W     E+  +   GP+F WL +AV AS+  R+    +++P+L+L+A +D
Sbjct:   35 YKAKGVSEQFLGVADVAISCRTFLAQNATAK-------IILCTGYNESYLKYSELIMNLCESGFSVYCYDHRGQGFSGRFLNQEKR----GYVDKFENYVDDLCYFFEQV-------------SGS--------------QKNDLPI------------FFIAHSMGGAICSLAVNEKKINPNGVILSAPMHEIMLTPYH-ILEVPVYGILSLMCKLNYANKYAFGQTDCI--PFRP-FEGNDVTHSKARYSVWRKHIDEIEDMQLGGPTFQWLKEAVGASRTCRKHFAKMNIPILLLQAEVD 283          
BLAST of mRNA_S-firma_M_contig953.20520.1 vs. uniprot
Match: A0A833JGU7_9PROT (Alpha/beta fold hydrolase n=1 Tax=Fluviispira multicolorata TaxID=2654512 RepID=A0A833JGU7_9PROT)

HSP 1 Score: 100 bits (250), Expect = 2.650e-20
Identity = 80/300 (26.67%), Postives = 136/300 (45.33%), Query Frame = 1
Query:  250 FSRDGADGVFMGAAGVPVRYRLFPKYSPEEEGSKLRPGVVLLTGLMESMVKYGETIAHLNDRGFSVYTYDHHGQGLSGRLPVPDSADTTVAHITDFDHYVQDLVQFSKVVLPAMVPLHLHRDESGSRGGGGEAAIADVVGESSSLPLENGDGDGGPLKLSVIAHSMGGLVAVKAALEEPLLFEGMVLAAPM--LAPNTGKLSNGIVGAVAWVATKLAQGHRSPIRR----PARATMEWSKVTHDRRRLRLWETLRGEVSCVLQRGPSFAWLSQAVRASKRGRRRLGDLSVPVLVLEAGLD 1131
            +   G+   F+G   +P+  R+F       E SK    ++L TG  ES +KY E I +L + GFSVY +DH GQG SGR    +       ++  F++YV+DL  + + +                           V G    LP              ++AHSMGG +A  A   + +   G++L++PM  +A +   +   ++ ++  +  KL +       +    P R   E + VT+ + R  +W     E+  +   GP+F W+ +A++AS+  R+   D +VP+LVL+A  D
Sbjct:   35 YKSQGSTNQFLGVNDIPISCRIF-------ENSKATVKILLCTGYNESYLKYAELIMNLFEMGFSVYCFDHRGQGFSGRFIGQEKK----GYVDHFENYVEDLSFYFENI---------------------------VNGHQVELPT------------FILAHSMGGAIATLAVCGKKITPYGVILSSPMHAIALSPYLILEYLIYSLTNIFCKLGKNKEYVFGQTDCIPFRP-FEGNDVTNSKFRYEIWRKHISEIDDMQLGGPTFGWMREAIKASRSARKMGYDNNVPILVLQAEKD 283          
BLAST of mRNA_S-firma_M_contig953.20520.1 vs. uniprot
Match: A0A3B0VQU3_9ZZZZ (Lysophospholipase L2 n=2 Tax=root TaxID=1 RepID=A0A3B0VQU3_9ZZZZ)

HSP 1 Score: 98.2 bits (243), Expect = 3.320e-19
Identity = 85/299 (28.43%), Postives = 123/299 (41.14%), Query Frame = 1
Query:  250 FSRDGADGVFMGAAGVPVRYRLFPKYSPEEEGSKLRPGVVLLTGLMESMVKYGETIAHLNDRGFSVYTYDHHGQGLSGRLPVPDSADTTVAHITDFDHYVQDLVQFSKVVLPAMVPLHLHRDESGSRGGGGEAAIADVVGESSSLPLENGDGDGGPLKLSVIAHSMGGLVAVKAALEEPLLFEGMVLAAPMLAPNTGKLSNGIVGAVAWVATKLAQGH-----RSPIRRPARATMEWSKVTHDRRRLRLWETLRGEVSCVLQRGPSFAWLSQAVRASKRGRRRLGDLSVPVLVLEAGLD 1131
            F+     G  +GA GV + Y        + E S  +  +V++ G  E   KY E    L D  +S Y YDH GQGLSGRL      D     +  F +YV DL +F + V    V    H+                                    +L ++AHSMGG +A+  ++E P +  GM+L +PML  NT    N +   +    T L  G        P   PA+A +  + +TH   R  L + L  +        P+F WL ++    K+     G L +P+LVLE G D
Sbjct:   70 FTTQFKTGTMLGAGGVAIHYA-------KREISGEQAALVIVDGRTEYTTKYAELFYDLRDMPWSFYIYDHRGQGLSGRL----LRDYQKGDVERFSNYVADLKEFIQTV----VKKKPHK------------------------------------RLFILAHSMGGTIAIIYSIENPGILSGMILCSPMLQINTAPYPNELARLLTAGITDLGGGGFYVFGGGPYN-PAKAFVG-NDLTHSAARFALNKKLLHKFPADELGSPTFKWLYESFEGMKKANAGAGKLRMPILVLEGGAD 315          
BLAST of mRNA_S-firma_M_contig953.20520.1 vs. uniprot
Match: A0A369KX79_9PROT (Alpha/beta hydrolase n=1 Tax=Spirobacillus cienkowskii TaxID=495820 RepID=A0A369KX79_9PROT)

HSP 1 Score: 94.7 bits (234), Expect = 3.760e-18
Identity = 82/300 (27.33%), Postives = 132/300 (44.00%), Query Frame = 1
Query:  250 FSRDGADGVFMGAAGVPVRYRLFPKYSPEEEGSKLRPGVVLLTGLMESMVKYGETIAHLNDRGFSVYTYDHHGQGLSGRLPVPDSADTTVAHITDFDHYVQDLVQFSKVVLPAMVPLHLHRDESGSRGGGGEAAIADVVGESSSLPLENGDGDGGPLKLSVIAHSMGGLVAVKAALEEPLLFEGMVLAAPMLAPNTG--KLSNGIVGAVAWVATKLAQGHRSPIRR----PARATMEWSKVTHDRRRLRLWETLRGEVSCVLQRGPSFAWLSQAVRASKRGRRRLGDLSVPVLVLEAGLD 1131
            +S  G +  F GA  + +  R+F   +P+ +        +L TG  ES +KY E I +L + GFSVY +DH GQG S R     S  +   ++  F+HY+ DL QF   V     P+                           LP+             +IAHSMGG +++ A L + +    +VL+APML    G  +L    V  ++ +   L +       +    P R   E + VT+ + R   W     ++  +   GP+F W+ QA+  SK+ R+   ++  P+L+L+A  D
Sbjct:   35 YSSQGQEYKFQGANNISISARIFIHSTPKGK-------FLLTTGYNESHLKYAEFIMNLFEMGFSVYCFDHRGQGFSERF----SEQSKRGYVDKFEHYINDLSQFFDYVSRHDNPV---------------------------LPVH------------IIAHSMGGAISLLALLNQKITPRSLVLSAPMLEIVLGPTRLLELPVLYLSHLMCLLGRSKNYVFGQTDCIPFRP-FEGNDVTNSKGRYTAWRNHIHDLEEMQLGGPTFGWMQQAILFSKKIRKTKNEIKTPILILQAEKD 283          
BLAST of mRNA_S-firma_M_contig953.20520.1 vs. uniprot
Match: A0A7X1HAY5_9HYPH (Alpha/beta hydrolase n=1 Tax=Rhizobium sp. AQ_MP TaxID=2761536 RepID=A0A7X1HAY5_9HYPH)

HSP 1 Score: 94.0 bits (232), Expect = 6.410e-18
Identity = 85/290 (29.31%), Postives = 129/290 (44.48%), Query Frame = 1
Query:  271 GVFMGAAGVPVRYRLFPKYSPEEEGSKLRPGVVLLTGLMESMVKYGETIAHLNDRGFSVYTYDHHGQGLSGRLPVPDSADTTVAHITDFDHYVQDLVQF-SKVVLPAMVPLHLHRDESGSRGGGGEAAIADVVGESSSLPLENGDGDGGPLKLSVIAHSMGGLVAVKAALEEPLLFEGMVLAAPMLAPNTGKLSNGIVGAVAWVATKLAQGHRSPIRRPARATMEWSKVTHDRRRLRLWETLRGEVSCVLQRGPSFAWLSQAVRASKRGRR--RLGDLSVPVLVLEAGLD 1131
            G F G  GV +RY +F   +P+  G+     +VLL G  E++ KY ETI  LN+RGF V TYD  GQG S RL      DT   H+  FDHY++DL  F  ++VLP                              + LP              ++AHS GGL+A+KAA       E MVLAAP +     + S   +  +A +A+    G  +  +       E + +T D  R    + +  +   +    P+  W+ ++ +A +  RR   L  ++VP +++  G D
Sbjct:   20 GFFQGHRGVRLRYAVFRSQAPKTLGT-----IVLLHGRNETIEKYFETIRELNERGFWVATYDFRGQGGSERL----LKDTRRGHVARFDHYIRDLEIFLEQIVLP-----------------------------DTRLPF------------FLVAHSTGGLIALKAAPRLANRIERMVLAAPFVGLGGQRTSPENIRRLAMLASFTGLGRVTLNKDEPLKPFEGNPLTSDALRFARNQRILTDHPELALGPPTARWIYESQKAIEAIRRPGHLASITVPTVIIAPGND 259          
BLAST of mRNA_S-firma_M_contig953.20520.1 vs. uniprot
Match: A0A6H5JGE2_9PHAE (Hydrolase_4 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JGE2_9PHAE)

HSP 1 Score: 94.4 bits (233), Expect = 8.130e-18
Identity = 78/258 (30.23%), Postives = 123/258 (47.67%), Query Frame = 1
Query:  364 VVLLTGLMESMVKYGETIAHLNDRGFSVYTYDHHGQGLSGRLPVPDSADTTVAHITDFDHYVQDLVQFSKVVLPAMVPLHLHRDESGSRGGGGEAAIADVVGESSSLPLENGDGDGGPLKLSVIAHSMGGLVAVKAALEEPLLFEGMVLAAPMLAPNTGKLSNGIVGAVAWVATKLAQGHR-SPIRRPARATMEWS-KVTHDRRRLRLWETLRGEVSCVLQRGPSFAWLSQAVRASKRGRRRLGDLSVPVLVLEAGLD 1131
            V+LLTG  ES +KYG+ I+ L   G +VY  D   QGLSGR  +    D  V ++  FD ++ DL  F                            +  VV ES  +            +L+ +AHSMGGL+++ AA  +  LF+ +V+ +PM+    G + + +   +  +  +L  G   +P++     +   + K+T D+ RL  WE +R     V   G S  W+ +A++A    R R   +SVPVL+LEAG+D
Sbjct:   48 VLLLTGWDESFLKYGDVISELLQAGINVYAMDWRSQGLSGRHLL----DPQVTYVESFDDHLDDLSFF----------------------------VNQVVVESCGVRTS---------QLTCLAHSMGGLLSLMAAAGDRGLFQRLVVCSPMIMMKCG-MPHFVALWLGRLFCRLGMGSSYAPVQSGVDVSRPITMKLTTDKARLATWERIRRAYPIVAMGGMSNLWVVEAIKAQNWFRARAKQVSVPVLLLEAGVD 263          
BLAST of mRNA_S-firma_M_contig953.20520.1 vs. uniprot
Match: UPI001C99E110 (alpha/beta fold hydrolase n=1 Tax=Ferrimonas balearica TaxID=44012 RepID=UPI001C99E110)

HSP 1 Score: 93.2 bits (230), Expect = 1.020e-17
Identity = 88/294 (29.93%), Postives = 129/294 (43.88%), Query Frame = 1
Query:  271 GVFMGAAGVPVRYRLFPKYSPEEEGSKLRPGVVLLTGLMESMVKYGETIAHLNDRGFSVYTYDHHGQGLSGRLPVPDSADTTVAHITDFDHYVQDLVQ-FSKVVLPAMVPLHLHRDESGSRGGGGEAAIADVVGESSSLPLENGDGDGGPLKLSVIAHSMGGLVAVKAALEEPLLFEGMVLAAPM---LAPNTGKLSNGIVGAVAWVAT-KLAQGHRS--PIRRPARATMEWSKVTHDRRRLRLWETLRGEVSCVLQRGPSFAWLSQAVRASKRGRRRLGDLSVPVLVLEAGLD 1131
            G F G  GVP+ Y +     P+E G+     + L TG +E+ +KY E +  L   GF++Y +DH GQGLSGR+     A+  V H+  FD YV D+ + +  ++ PA    H H                                      L+++ HSMGG +A       P  F+  VL+APM   L P    L   +V  +A  A  +   G     P+R       E +++T D RR   +  L      V    PS  WL+QA++   +  R    +SVP+LVL+AG D
Sbjct:   14 GSFAGVDGVPIHYAVLRH--PQERGA-----IALCTGRVETYLKYHELVDDLYGMGFTLYLWDHRGQGLSGRM----LANPQVGHVARFDDYVADMHELYQTLIAPAG---HRH--------------------------------------LALLGHSMGGAIATTYLQRYPDHFQAAVLSAPMYGILLPAPKALLQPLVALMATFAPGRYVPGGNDYDPVR------FEENELTGDARRYAEFRALYEAWPGVKLGDPSLGWLAQALKQIDKLTRMT--VSVPILVLQAGDD 247          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig953.20520.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G484_ECTSI2.510e-14868.16Lysophospholipase l2 pldb, hydrolase of alpha/beta... [more]
A0A6H5KMI3_9PHAE8.100e-7165.99Hydrolase_4 domain-containing protein n=1 Tax=Ecto... [more]
A0A0G4ERV7_VITBC3.230e-2934.43Hydrolase_4 domain-containing protein n=1 Tax=Vitr... [more]
A0A1L4D1T5_9PROT1.410e-2029.70Hydrolase_4 domain-containing protein n=1 Tax=Silv... [more]
A0A833JGU7_9PROT2.650e-2026.67Alpha/beta fold hydrolase n=1 Tax=Fluviispira mult... [more]
A0A3B0VQU3_9ZZZZ3.320e-1928.43Lysophospholipase L2 n=2 Tax=root TaxID=1 RepID=A0... [more]
A0A369KX79_9PROT3.760e-1827.33Alpha/beta hydrolase n=1 Tax=Spirobacillus cienkow... [more]
A0A7X1HAY5_9HYPH6.410e-1829.31Alpha/beta hydrolase n=1 Tax=Rhizobium sp. AQ_MP T... [more]
A0A6H5JGE2_9PHAE8.130e-1830.23Hydrolase_4 domain-containing protein n=2 Tax=Ecto... [more]
UPI001C99E1101.020e-1729.93alpha/beta fold hydrolase n=1 Tax=Ferrimonas balea... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig953contigS-firma_M_contig953:21966..26273 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-19
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score97.4
Seed ortholog evalue1.5e-17
Seed eggNOG ortholog377629.TERTU_1752
Preferred namepldB
KEGG koko:K01048
KEGG Pathwayko00564,map00564
EggNOG free text desc.Serine aminopeptidase, S33
EggNOG OGs1MWDA@1224,1RRJP@1236,2PPXB@256005,COG2267@1,COG2267@2
EC3.1.1.5
COG Functional cat.I
Best tax levelAlteromonadales genera incertae sedis
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionAlpha/Beta hydrolase fold
Ec32 orthologEc-02_001680.1
Exons8
Model size1131
Cds size1131
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig953.20520.1prot_S-firma_M_contig953.20520.1Sphaerotrichia firma Sfir_13m malepolypeptideS-firma_M_contig953 21966..26273 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622828788.2614276-CDS-S-firma_M_contig953:21965..221411622828788.2614276-CDS-S-firma_M_contig953:21965..22141Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig953 21966..22141 +
1697105162.9920201-CDS-S-firma_M_contig953:21965..221411697105162.9920201-CDS-S-firma_M_contig953:21965..22141Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig953 21966..22141 +
1622828788.2783136-CDS-S-firma_M_contig953:22538..226761622828788.2783136-CDS-S-firma_M_contig953:22538..22676Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig953 22539..22676 +
1697105163.0025132-CDS-S-firma_M_contig953:22538..226761697105163.0025132-CDS-S-firma_M_contig953:22538..22676Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig953 22539..22676 +
1622828788.2952757-CDS-S-firma_M_contig953:23075..231951622828788.2952757-CDS-S-firma_M_contig953:23075..23195Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig953 23076..23195 +
1697105163.0108395-CDS-S-firma_M_contig953:23075..231951697105163.0108395-CDS-S-firma_M_contig953:23075..23195Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig953 23076..23195 +
1622828788.3124309-CDS-S-firma_M_contig953:23360..234561622828788.3124309-CDS-S-firma_M_contig953:23360..23456Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig953 23361..23456 +
1697105163.019032-CDS-S-firma_M_contig953:23360..234561697105163.019032-CDS-S-firma_M_contig953:23360..23456Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig953 23361..23456 +
1622828788.3293402-CDS-S-firma_M_contig953:24289..245601622828788.3293402-CDS-S-firma_M_contig953:24289..24560Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig953 24290..24560 +
1697105163.02768-CDS-S-firma_M_contig953:24289..245601697105163.02768-CDS-S-firma_M_contig953:24289..24560Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig953 24290..24560 +
1622828788.3457026-CDS-S-firma_M_contig953:24692..247961622828788.3457026-CDS-S-firma_M_contig953:24692..24796Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig953 24693..24796 +
1697105163.0361848-CDS-S-firma_M_contig953:24692..247961697105163.0361848-CDS-S-firma_M_contig953:24692..24796Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig953 24693..24796 +
1622828788.363301-CDS-S-firma_M_contig953:25234..254271622828788.363301-CDS-S-firma_M_contig953:25234..25427Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig953 25235..25427 +
1697105163.0467033-CDS-S-firma_M_contig953:25234..254271697105163.0467033-CDS-S-firma_M_contig953:25234..25427Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig953 25235..25427 +
1622828788.3829744-CDS-S-firma_M_contig953:26240..262731622828788.3829744-CDS-S-firma_M_contig953:26240..26273Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig953 26241..26273 +
1697105163.054786-CDS-S-firma_M_contig953:26240..262731697105163.054786-CDS-S-firma_M_contig953:26240..26273Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig953 26241..26273 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-firma_M_contig953.20520.1

>prot_S-firma_M_contig953.20520.1 ID=prot_S-firma_M_contig953.20520.1|Name=mRNA_S-firma_M_contig953.20520.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=377bp
TVSLSAGLTAGGANTQQHLHQGLPAFAEDHQLQEALARCEVILRAGEAAG
IEQASGKTSAVAPLASENVDSSKSSGPLDGLRRFSRDGADGVFMGAAGVP
VRYRLFPKYSPEEEGSKLRPGVVLLTGLMESMVKYGETIAHLNDRGFSVY
TYDHHGQGLSGRLPVPDSADTTVAHITDFDHYVQDLVQFSKVVLPAMVPL
HLHRDESGSRGGGGEAAIADVVGESSSLPLENGDGDGGPLKLSVIAHSMG
GLVAVKAALEEPLLFEGMVLAAPMLAPNTGKLSNGIVGAVAWVATKLAQG
HRSPIRRPARATMEWSKVTHDRRRLRLWETLRGEVSCVLQRGPSFAWLSQ
AVRASKRGRRRLGDLSVPVLVLEAGLD
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mRNA from alignment at S-firma_M_contig953:21966..26273+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-firma_M_contig953.20520.1 ID=mRNA_S-firma_M_contig953.20520.1|Name=mRNA_S-firma_M_contig953.20520.1|organism=Sphaerotrichia firma Sfir_13m male|type=mRNA|length=4308bp|location=Sequence derived from alignment at S-firma_M_contig953:21966..26273+ (Sphaerotrichia firma Sfir_13m male)
ACAGTATCCCTCTCCGCAGGGCTGACCGCTGGGGGAGCAAACACTCAACA GCACTTGCATCAAGGTTTGCCAGCGTTCGCGGAGGATCACCAGCTCCAAG AAGCCCTGGCCCGCTGCGAGGTCATTCTTCGTGCCGGCGAAGCCGCTGGA ATCGAGCAGGCGTCAGGAAAAACGAGGTTGATGGAAATGAGCTCGTGTCG ACTTTCGACTGACTGGCTCGAAACACCCCGTGTGATACTTCCTCCCTAAC AAAACTTGGATCGATTGCAGCAGCATGCTTTGGCGAGTGCCTCGCTTTTT GCTTGCTGAAGCAGTCAGTTGAGCGTGGTGATGCATTCTCAGTATTCCTT CAGCTCCCTCTTTCGCTGTCTCACCTACATTCTATACGGCAGCGTATCTT GCCCCCCTTTCCCTGTCACATACCCGCGGAGGGAGCCCGTTCCGGTTGCT GTTGATACACACCCCTATCCCGACAGATCCGTCCAACTAATGCATGCCTT GATTTTTGTCCCGGGGTATCTTCTCTTATCTCGATGCACTACCTCCGCCG ACATCCCTGCCGAATCAACGCAGCGCTGTCGCTCCATTGGCGTCGGAAAA TGTAGACTCGTCGAAGTCGTCTGGCCCGCTCGATGGTCTGCGGCGGTTTT CTCGAGACGGAGCGGACGGCGTTTTCATGGGAGCCGCTGGTGTCCCAGTT CGCTACCGCCTGTGAGCTGGTTGTTTAGTCGCTCGAGCGGTGATGTGCGG TGATCAGATGTGCTTAGATTTTGTTTTTCTCTGTTGGGCGTGTCTCGTCT TTTCGTGTTCCACCGGAGAGGATTACATCAGTTCCTCTCATATTGGTTGA GACCAAGTATGTCGCACTGGTCAGGAGGACGCTGGCTGATTAGTAGAGGT CAGGGCGGGCTTTGATTTGAAGATAGCAGCAGAATAAACAGCAACATCAA CGCAACAATGGCAGCTCCCATGTATCTGTTTCTTACCATGGTTGCCAATG ATCTATTGTTGCTACCTTGGCAATATGCCTTGGGGACATGCCAGCTTGCC CCAGTTGTGCCGCCAAATTGAACTCTTCCTCTTTTCTGTGTATCGATCCG CCCCTTTCAGTTTCCCCAAGTACTCGCCGGAGGAAGAGGGTAGCAAGCTA CGACCAGGAGTTGTGCTGCTGACGGGTTTGATGGAGTCAATGGTCAAGTA CGGGGAAACTATCGCTCACCTAAATGACAGGTACGATTGCATCGCTGCCG GTGTCCTTTGCTTTCGATCGCATCGGGTGCTTCTCACGGTGTGCGGTTTC GCTGTTGTTGTTGTTGTTGTTGTTGTTGGTTTCCTTGACGGTGTGTGTGG CTATCACTAACATTGTTTTGTCGATTGTTGATCGTTCTATTTTAGGGGCT TCTCGGTGTACACGTACGACCACCACGGGCAGGGGCTCTCCGGCCGGCTT CCTGTCCCAGACAGTGCAGATACGACCGTCGCTCACATCACGTAAGCCAA CGCCAATGGGGGGTGCAGTGCCACTGCTATTCGGTGTGGCTCTCAGCGTG GCTTCGAAACAATTTACGCCAATTCGCCATGAGTTTCCGGAAGCACAAAA ATTGCCGTATTTTCCAGAACAGGCTGGCGGTGTTTGTTTGGCGACGTTCG TTCTTTGGTTTCGAAAGGCGACAGTTTAAATACGCATACTTCTATGCATG TGCACTGTAGCGACAGCAAGGTGTAAAGCACCATTCCAAGTGGTATGATC TTTGCCAAGGTGCTCCCGTTCCGCGACTCTGCAGTGCTAGCAAAGCGTGG ATGTCTCAACAAGCAGTAGGCAGGGACACCGGCTGTGAGAACATCGCTAG TTCCATCGATTCAAACTGCAGAGGTCGGATTTTTCAACAATTCAGTCGTC AGCCGATATTGTTACCAGTTCTTTGCTTCTCTGCTTTCGCACACCCCTCC TTTTTTTCGAGCACGATTTTTGAGAAAGGCAAGCCTCCATTTTCCAATGG TACCTCCATTTTCCAATGGTACTCGGGTTTCTATTTATTTGGTCCATGCA GACGGCCCGGCCCTGACGTACCTCTCGGTCTGCTGATGCTAGTGCTGACG CTGATGCCACCCGCTTGCCCTAGATACAACCACCGGAACAGTGACCAACG GTGATGATGCACCGTTCTCGCCCGGGTACATGATCTAACGTGCGCCCCCA CGCGGCCCGCCTGATCCCCCTTCCCTGAAAATTGCACCTCGTCCGTTTGT TTTCCTCCTCGTGTGCAACGCGCCTTGCTGCAACGGTGGCCGTAAACCCT CCGTGTATCTTCGACCCCTTTCAGCGATTTCGACCACTACGTGCAGGACC TGGTACAGTTTTCGAAGGTCGTCTTGCCGGCGATGGTTCCGCTCCACCTG CATAGAGATGAGAGTGGGAGCCGGGGCGGGGGAGGAGAGGCGGCAATAGC GGACGTGGTCGGGGAATCTTCTTCTCTCCCTCTGGAGAATGGTGATGGTG ATGGCGGTCCGCTGAAGCTTTCAGTGATCGCGCACTCGATGGGCGGGCTG GTGGCGGTGAAGGCTGCTTTGGAGGAGCCGCTTCTCTTCGAAGGGGTGAG ATGTACGGAGTATCACGCCTTGTATTTTCACACACGTACCAACAACATCA GAGACAAGACTTGTGTCAGTGCGGGCACGTAAATATATAAACCTCAGAAA ACAGTTGTGCATCGTCGTCACGAACAGATGGTCCTGGCGGCCCCTATGCT GGCGCCAAACACCGGAAAGCTGTCGAACGGCATTGTGGGAGCCGTGGCAT GGGTTGCAACCAAGCTCGCCCAGGGACACAGGTGGGTACTACCTGAAGCT GGCTTTTGTATGCGCAGCAGTTCAAATGCTTTTGACGCGCACCTTATGCG AGATTAGCACACTCCAGCACTGGTTCGTGAAGATTGTGGACAACTTACAA AGGAAGGAATCGGAGCCGGATGACTGAGTCCCGTGTGGTGCTGGTCGTCC GGCTGATTGCGTGCGTGGAGGAAATTGATTGGTGCCACAGAGCAAGCTTT CATGGTTTTCAGCGAAGTGGGCTGATATTGGAAATGAATGAAATCAACGA ATATGAGTGCATCATTTCGACCGACCTCCCCACGGCACACCATACGGCAC CACCACGTTCACGCTTGCCTGCCAATGGACACGCGAATGTCTCACCCCGT GCTCGCCCGCCCACCCTCCCGTCGGTCTCTTGCAAAATTAAATACCACAT GTCGCGGAAATGAGCGCAGGAGCCCGATCAGGCGGCCCGCCAGGGCAACG ATGGAGTGGTCGAAGGTAACGCACGACAGGCGGCGTCTACGGCTCTGGGA GACCCTCCGGGGTGAGGTGAGCTGCGTTTTGCAGCGAGGCCCGAGCTTTG CCTGGTTGTCTCAGGCCGTCCGCGCGTCGAAGCGCGGCCGGCGGCGGCTC GGCGATCTGTCGGTGAGTGTTTTGTGCGGGTCGGCAAACGATTTTGGCGC GATGTTTATGGAGTGGTTTGTGGTACAAGCTCAAGTAATGATTTCAGTGA CTAAGGATTTAGGGCGAGAAAGCTAGTGCTAGCTTGTTTTCGTTATGTCA CCAGTGCTATTTTCAGGTTCTCCCGGCACGATGGAATGAAGGGGCTTAAG TGTTGTTATGAAAAACATCATGCCCTGGCTTGACGGTGCGCTACACTACC GTGCCCCTTGTGCCAGCTGTCGGCAATATTGAGGGGTCAATCCCATGGAT GCATGAGCTACCGCAGAGTGTTTATTTACAACCCAGCATGCGTCCAAGTG CATGAGTTGTGGTGTTGCTGTTTGGGGTCAGGGTTGATGTGCACCATGGC GCGAAATTCTTGCTCCTTTCCATAATACGTTTTTTTCTTTGCTGTTGTAC GTTTGATCGGGAACCATGCATGCTCAATTGTGAGAAAACAGAGTCCTTGG TCTGTCCGACCCTTTTGGCACCCTTGATACGAATTCTGTGCGGAGAAAAG ATCCAAAAAGCCGCCTTCTACTTTGTACCCTGCTTCGTGGTCCTCTTCTG CCCGACCGCGCTTTACGTGTTTCGATTCTGTTTTCCTCCCCGCGGTACAA ACTGTCCGAGCTGGTTTGCAGTGTTCACAGAGTTGCCCCTTTGGTGAACT GTTCAGCAGCAATCTGATTCAGAACTCGTGCAGTTCAACTCGTTTCCACC TGCTGCGCCATCTCGTCTGTTGTTGGTGTTGTCAAGTGTTGATGGAATGT AATCTTCTTTCGGTTTCGTTTACAGGTCCCCGTTCTGGTTCTCGAGGCTG GCTTAGAC
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Coding sequence (CDS) from alignment at S-firma_M_contig953:21966..26273+

>mRNA_S-firma_M_contig953.20520.1 ID=mRNA_S-firma_M_contig953.20520.1|Name=mRNA_S-firma_M_contig953.20520.1|organism=Sphaerotrichia firma Sfir_13m male|type=CDS|length=2262bp|location=Sequence derived from alignment at S-firma_M_contig953:21966..26273+ (Sphaerotrichia firma Sfir_13m male)
ACAGTATCCCTCTCCGCAGGGCTGACCGCTGGGGGAGCAAACACTCAACA
GCACTTGCATCAAGGTTTGCCAGCGTTCGCGGAGGATCACCAGCTCCAAG
AAGCCCTGGCCCGCTGCGAGGTCATTCTTCGTGCCGGCGAAGCCGCTGGA
ATCGAGCAGGCGTCAGGAAAAACGAGACAGTATCCCTCTCCGCAGGGCTG
ACCGCTGGGGGAGCAAACACTCAACAGCACTTGCATCAAGGTTTGCCAGC
GTTCGCGGAGGATCACCAGCTCCAAGAAGCCCTGGCCCGCTGCGAGGTCA
TTCTTCGTGCCGGCGAAGCCGCTGGAATCGAGCAGGCGTCAGGAAAAACG
AGCGCTGTCGCTCCATTGGCGTCGGAAAATGTAGACTCGTCGAAGTCGTC
TGGCCCGCTCGATGGTCTGCGGCGGTTTTCTCGAGACGGAGCGGACGGCG
TTTTCATGGGAGCCGCTGGTGTCCCAGTTCGCTACCGCCTCGCTGTCGCT
CCATTGGCGTCGGAAAATGTAGACTCGTCGAAGTCGTCTGGCCCGCTCGA
TGGTCTGCGGCGGTTTTCTCGAGACGGAGCGGACGGCGTTTTCATGGGAG
CCGCTGGTGTCCCAGTTCGCTACCGCCTTTTCCCCAAGTACTCGCCGGAG
GAAGAGGGTAGCAAGCTACGACCAGGAGTTGTGCTGCTGACGGGTTTGAT
GGAGTCAATGGTCAAGTACGGGGAAACTATCGCTCACCTAAATGACAGTT
TCCCCAAGTACTCGCCGGAGGAAGAGGGTAGCAAGCTACGACCAGGAGTT
GTGCTGCTGACGGGTTTGATGGAGTCAATGGTCAAGTACGGGGAAACTAT
CGCTCACCTAAATGACAGGGGCTTCTCGGTGTACACGTACGACCACCACG
GGCAGGGGCTCTCCGGCCGGCTTCCTGTCCCAGACAGTGCAGATACGACC
GTCGCTCACATCACGGGCTTCTCGGTGTACACGTACGACCACCACGGGCA
GGGGCTCTCCGGCCGGCTTCCTGTCCCAGACAGTGCAGATACGACCGTCG
CTCACATCACCGATTTCGACCACTACGTGCAGGACCTGGTACAGTTTTCG
AAGGTCGTCTTGCCGGCGATGGTTCCGCTCCACCTGCATAGAGATGAGAG
TGGGAGCCGGGGCGGGGGAGGAGAGGCGGCAATAGCGGACGTGGTCGGGG
AATCTTCTTCTCTCCCTCTGGAGAATGGTGATGGTGATGGCGGTCCGCTG
AAGCTTTCAGTGATCGCGCACTCGATGGGCGGGCTGGTGGCGGTGAAGGC
TGCTTTGGAGGAGCCGCTTCTCTTCGAAGGGCGATTTCGACCACTACGTG
CAGGACCTGGTACAGTTTTCGAAGGTCGTCTTGCCGGCGATGGTTCCGCT
CCACCTGCATAGAGATGAGAGTGGGAGCCGGGGCGGGGGAGGAGAGGCGG
CAATAGCGGACGTGGTCGGGGAATCTTCTTCTCTCCCTCTGGAGAATGGT
GATGGTGATGGCGGTCCGCTGAAGCTTTCAGTGATCGCGCACTCGATGGG
CGGGCTGGTGGCGGTGAAGGCTGCTTTGGAGGAGCCGCTTCTCTTCGAAG
GGATGGTCCTGGCGGCCCCTATGCTGGCGCCAAACACCGGAAAGCTGTCG
AACGGCATTGTGGGAGCCGTGGCATGGGTTGCAACCAAGCTCGCCCAGGG
ACACAGATGGTCCTGGCGGCCCCTATGCTGGCGCCAAACACCGGAAAGCT
GTCGAACGGCATTGTGGGAGCCGTGGCATGGGTTGCAACCAAGCTCGCCC
AGGGACACAGGAGCCCGATCAGGCGGCCCGCCAGGGCAACGATGGAGTGG
TCGAAGGTAACGCACGACAGGCGGCGTCTACGGCTCTGGGAGACCCTCCG
GGGTGAGGTGAGCTGCGTTTTGCAGCGAGGCCCGAGCTTTGCCTGGTTGT
CTCAGGCCGTCCGCGCGTCGAAGCGCGGCCGGCGGCGGCTCGGCGATCTG
TCGGAGCCCGATCAGGCGGCCCGCCAGGGCAACGATGGAGTGGTCGAAGG
TAACGCACGACAGGCGGCGTCTACGGCTCTGGGAGACCCTCCGGGGTGAG
GTGAGCTGCGTTTTGCAGCGAGGCCCGAGCTTTGCCTGGTTGTCTCAGGC
CGTCCGCGCGTCGAAGCGCGGCCGGCGGCGGCTCGGCGATCTGTCGGTCC
CCGTTCTGGTTCTCGAGGCTGGCTTAGACGTCCCCGTTCTGGTTCTCGAG
GCTGGCTTAGAC
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