mRNA_S-firma_M_contig9521.20514.1 (mRNA) Sphaerotrichia firma Sfir_13m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-firma_M_contig9521.20514.1
Unique NamemRNA_S-firma_M_contig9521.20514.1
TypemRNA
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Homology
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BLAST of mRNA_S-firma_M_contig9521.20514.1 vs. uniprot
Match: D7FP16_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP16_ECTSI)

HSP 1 Score: 366 bits (940), Expect = 1.150e-116
Identity = 195/207 (94.20%), Postives = 200/207 (96.62%), Query Frame = 1 
Query:   55 FAEGGVVAGPISLLGYLRVEVFGAEDHGVVDTQANRTVRNFLTVPRQLERLLLFGMLVCLDTFLYVTTFLPIRIVIGLVTTLFSLVTSRRTRPTVNRPLVYDWMRGATIAAALCCLQFLEMSRVYHYIRGQAMVKLYVLIAMVEIFDKLMCSFGQDALDSLYLSTVHKKKRRVLVHFAIVCVTACLHSLLLFVHVTTLTVAVNSSDQ 675
            FAEGGV AGPISLLGYLRVEVFGAEDHGVVDTQANRTVRNFLTVPRQLERLLLFGMLVCLDTFLYVTTFLPIRIVIG+V++LFSL+T RR RP+VNRPLVYDWMRGAT AAAL  LQFLEMSRVYHYIRGQAMVKLYVLIAMVEIFDKLMCSFGQDALDSLYLSTVHKKKRRVLVHF IVCVTACLHSLLLFVHVTTLTVAVNSSDQ
Sbjct:  639 FAEGGVAAGPISLLGYLRVEVFGAEDHGVVDTQANRTVRNFLTVPRQLERLLLFGMLVCLDTFLYVTTFLPIRIVIGVVSSLFSLLTRRR-RPSVNRPLVYDWMRGATFAAALGSLQFLEMSRVYHYIRGQAMVKLYVLIAMVEIFDKLMCSFGQDALDSLYLSTVHKKKRRVLVHFTIVCVTACLHSLLLFVHVTTLTVAVNSSDQ 844
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BLAST of mRNA_S-firma_M_contig9521.20514.1 vs. uniprot
Match: A0A6H5KZ60_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ60_9PHAE)

HSP 1 Score: 172 bits (436), Expect = 1.290e-50
Identity = 100/137 (72.99%), Postives = 100/137 (72.99%), Query Frame = 1 
Query:  364 MRGATIAAALCCLQFLEMSRVYHYIRGQAMVKLYVLIAMVEIFDK---------------------------------LMCSFGQDALDSLYLSTVHKKKRRVLVHFAIVCVTACLHSLLLFVHVTTLTVAVNSSDQ 675
            MRGAT AAAL  LQFLEMSRVYHYIRGQAMVKLYVLIAMVEIFDK                                 LMCSFGQDALDSLYLSTVHKKKRRVLVHF IVCVTACLHSLLLFVHVTTLTVAVNSSDQ
Sbjct:    1 MRGATFAAALGSLQFLEMSRVYHYIRGQAMVKLYVLIAMVEIFDKASRFNGGVWFGPHVWLEPTAKYDTLTLLGCLRKLMCSFGQDALDSLYLSTVHKKKRRVLVHFTIVCVTACLHSLLLFVHVTTLTVAVNSSDQ 137
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BLAST of mRNA_S-firma_M_contig9521.20514.1 vs. uniprot
Match: A0A835YQB0_9STRA (Eukaryotic membrane protein family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQB0_9STRA)

HSP 1 Score: 159 bits (403), Expect = 7.540e-44
Identity = 81/110 (73.64%), Postives = 93/110 (84.55%), Query Frame = 1 
Query:  346 PLVYDWMRGATIAAALCCLQFLEMSRVYHYIRGQAMVKLYVLIAMVEIFDKLMCSFGQDALDSLYLSTVHKKKRRVLVHFAIVCVTACLHSLLLFVHVTTLTVAVNSSDQ 675
            P+ YD MRGA +A  L  LQ ++MSRVYHYIRGQ+M+KLYVLI MVEIFDKLMCSFGQDALDSLY ST+  KKR  L++F IVC+ + LHSLLLFVH+TTLTVAVNSSDQ
Sbjct:    4 PIAYDCMRGAMMAQCLWLLQHVQMSRVYHYIRGQSMIKLYVLIGMVEIFDKLMCSFGQDALDSLYWSTMRSKKRLTLLNFVIVCIQSTLHSLLLFVHITTLTVAVNSSDQ 113
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BLAST of mRNA_S-firma_M_contig9521.20514.1 vs. uniprot
Match: A0A7S1U4H5_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U4H5_9STRA)

HSP 1 Score: 157 bits (397), Expect = 3.320e-41
Identity = 100/224 (44.64%), Postives = 133/224 (59.38%), Query Frame = 1 
Query:   85 ISLLGYLRVEVFGAEDHGVVDTQANRT---VRNFLTVPRQLERLLLFGMLVCLDTFLYVTTFLPIRIVIGLVTTLFSLVTSRRTR---------------PTV---------NRPLVYDWMRGATIAAALCCLQFLEMSRVYHYIRGQAMVKLYVLIAMVEIFDKLMCSFGQDALDSLYLSTVHKKKR-RVLVHFAIVCVTACLHSLLLFVHVTTLTVAVNSSD 672
            +SL  YL VEV GA+ HG  + +A R    + NFL VP +LE+LL+FG  +C DTFLY+ T+LP+R V  ++  +   +   R R               PT          +R  +YD MR A +   +  L F ++ RVYH+IRGQAM+KLYVLIAMVEI DKLM SFGQDA+D+LY     + +  R+L  F + C++  LHS L FVHV TL VA+NS D
Sbjct:  141 LSLFDYLFVEVLGAQAHGP-EPEAGRVQENMANFLAVPWRLEQLLVFGFFICFDTFLYIITYLPLRCVTAVILLVLQPLYPYRVRRLEEAHRALADSPKGPTTPVPAPPQGFHRAHMYDLMRLALVFIGVRSLYFFQLGRVYHFIRGQAMIKLYVLIAMVEISDKLMSSFGQDAMDALYWQARKQPRSWRMLKSFLVACISTVLHSSLYFVHVATLNVAINSVD 363
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BLAST of mRNA_S-firma_M_contig9521.20514.1 vs. uniprot
Match: A0A6H5KXP0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXP0_9PHAE)

HSP 1 Score: 156 bits (395), Expect = 1.510e-40
Identity = 89/105 (84.76%), Postives = 94/105 (89.52%), Query Frame = 1 
Query:    1 AGEEDGVAVKGADGGAGAFAEGGVVAGPISLLGYLRVEVFGAEDHGVVDTQANRTVRNFLTVPRQLERLLLFGMLVCLDTFLYVTTFLPIRIVIGLVTTLFSLVT 315
            AG E G  +    GGA AFA G VVAGPISLLGYLRVEVFGAEDHGVVDTQANRTVRNFLTVPRQLERLLLFGMLVCLDTFLYVTTFLPIRIVIG+V++LFSL+T
Sbjct:  578 AGGEVGGDIAANGGGACAFAGGKVVAGPISLLGYLRVEVFGAEDHGVVDTQANRTVRNFLTVPRQLERLLLFGMLVCLDTFLYVTTFLPIRIVIGVVSSLFSLLT 682
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BLAST of mRNA_S-firma_M_contig9521.20514.1 vs. uniprot
Match: A0A662WLZ5_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WLZ5_9STRA)

HSP 1 Score: 147 bits (371), Expect = 3.630e-38
Identity = 91/199 (45.73%), Postives = 118/199 (59.30%), Query Frame = 1 
Query:   91 LLGYLRVEVFGAEDHGVVDTQANRTVRNFLTVPRQLERLLLFGMLVCLDTFLYVTTFLPIRIVIGL---VTTLFSLVTSRRTRPTVNRPLVYDWMRGATIAAALCCLQFLEMSRVYHYIRGQAMVKLYVLIAMVEIFDKLMCSFGQDALDSLYLSTVHKKKR--RVLVHFAIVCVTACLHSLLLFVHVTTLTVAVNSSD 672
            L  +   E+FG  D    D      V+NF  VPR  E+L LFG+L+ LD+FLYV T+LP+RI+      VT+ F     RRT         YD M    +A     L  ++MSRVYH IRGQAM+KLYVL  M+EIFD+L  S GQD LDSLY +  ++ +R  R+ + FA+  +   LH+LLLF  V TL VAVNSS+
Sbjct:   80 LSDFFYKEIFGVHDIKPTDGMHQERVQNFFAVPRNTEQLFLFGVLLALDSFLYVFTYLPLRILFACGCAVTSSFHTRVFRRTH-------FYDLMVAVIVAVGTVVLGHVDMSRVYHSIRGQAMIKLYVLFTMIEIFDRLFSSLGQDVLDSLYYTAKYQPRRVTRMFLDFAVAIIYVVLHALLLFAQVVTLNVAVNSSN 271
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BLAST of mRNA_S-firma_M_contig9521.20514.1 vs. uniprot
Match: F0Y8H1_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y8H1_AURAN)

HSP 1 Score: 148 bits (374), Expect = 6.660e-38
Identity = 90/207 (43.48%), Postives = 123/207 (59.42%), Query Frame = 1 
Query:   91 LLGYLRVEVFGAEDHGVVDTQANRTVRNFLTVPRQLERLLLFGMLVCLDTFLYVTTFLPIRIVIG---LVTTLFSLVTSRRT-RPTV--------NRPLVYDWMRGATIAAALCCLQFLEMSRVYHYIRGQAMVKLYVLIAMVEIFDKLMCSFGQDALDSLYLSTVHKKK-RRVLVHFAIVCVTACLHSLLLFVHVTTLTVAVNSSD 672
            LL + + E FG      +D      + NFL VP + ER + FG+L CLDTFLY  TFLP+R  I    L    +   TS+R  RP+         +R   YD  R  TI      L+ + +SR YH+IRGQ  +KLYV++ ++E+FD+L+C+F QDALDS YL+T H  + RRVL+ F +V V    HSLLL+ H+TTL V VN+S+
Sbjct:  124 LLAFAKTEAFGERHSAGLDDSVPEAIDNFLAVPAKFERFVAFGVLACLDTFLYTVTFLPLRAGIAAGWLALEAWRRATSQRAARPSYAITAFDGFSRARAYDLARFLTILLVNYVLKQVPLSRAYHWIRGQNTIKLYVIVGIMEVFDRLLCAFSQDALDSFYLTTRHATEWRRVLLFFGLVNVVVVSHSLLLYTHLTTLNVVVNASE 330
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BLAST of mRNA_S-firma_M_contig9521.20514.1 vs. uniprot
Match: D0NR04_PHYIT (Uncharacterized protein n=11 Tax=Phytophthora TaxID=4783 RepID=D0NR04_PHYIT)

HSP 1 Score: 145 bits (366), Expect = 3.600e-37
Identity = 92/202 (45.54%), Postives = 117/202 (57.92%), Query Frame = 1 
Query:   82 PISLLGYLRVEVFGAEDHGVVDTQANRTVRNFLTVPRQLERLLLFGMLVCLDTFLYVTTFLPIRIVIGL---VTTLFSLVTSRRTRPTVNRPLVYDWMRGATIAAALCCLQFLEMSRVYHYIRGQAMVKLYVLIAMVEIFDKLMCSFGQDALDSLYLSTVHKKKR--RVLVHFAIVCVTACLHSLLLFVHVTTLTVAVNSSD 672
            P  L  +   E+FG  D    D      V+NF  VP   E+L LFG+L+ LD+FLYV T+LP+RI+      VT+ F     RRT         YD M    IA     L +++MSRVYH IRGQAM+KLYVL  M+EIFD+L  S GQD LDSLY +  +  +R  R+ + FA+      LH+LLLF  V TL VAVNSS+
Sbjct:  124 PFRLSDFFYKEIFGVHDIKQSDGVHQERVQNFFVVPLNTEQLFLFGVLLALDSFLYVFTYLPLRILFACGCAVTSSFHARVFRRTH-------FYDLMVAVIIAVGTTVLGYVDMSRVYHAIRGQAMIKLYVLFTMIEIFDRLFSSLGQDVLDSLYYTAKYHPRRVTRMFLDFAVAITYVVLHALLLFAQVVTLNVAVNSSN 318
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BLAST of mRNA_S-firma_M_contig9521.20514.1 vs. uniprot
Match: A0A225W063_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225W063_9STRA)

HSP 1 Score: 145 bits (365), Expect = 9.230e-37
Identity = 92/202 (45.54%), Postives = 117/202 (57.92%), Query Frame = 1 
Query:   82 PISLLGYLRVEVFGAEDHGVVDTQANRTVRNFLTVPRQLERLLLFGMLVCLDTFLYVTTFLPIRIVIGL---VTTLFSLVTSRRTRPTVNRPLVYDWMRGATIAAALCCLQFLEMSRVYHYIRGQAMVKLYVLIAMVEIFDKLMCSFGQDALDSLYLSTVHKKKR--RVLVHFAIVCVTACLHSLLLFVHVTTLTVAVNSSD 672
            P  L  +   E+FG  D    D      V+NF  VP   E+L LFG+L+ LD+FLYV T+LP+RI+      VT+ F     RRT         YD M    I+     L  ++MSRVYH IRGQAM+KLYVL  M+EIFD+L  S GQD LDSLY +  +  +R  R+ + FA+  +   LHSLLLF  V TL VAVNSS+
Sbjct:  165 PFRLSDFFYKEIFGVHDIKQSDGVHQERVQNFFVVPLNTEQLFLFGVLLALDSFLYVFTYLPLRILFACGCAVTSSFHTRVFRRTH-------FYDLMVAVIISVGTMVLGHVDMSRVYHAIRGQAMIKLYVLFTMIEIFDRLFSSLGQDVLDSLYYTAKYHPRRVTRMFLDFAVAIIYVVLHSLLLFAQVVTLNVAVNSSN 359
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BLAST of mRNA_S-firma_M_contig9521.20514.1 vs. uniprot
Match: A0A3M6V9N5_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6V9N5_9STRA)

HSP 1 Score: 143 bits (360), Expect = 4.260e-36
Identity = 90/202 (44.55%), Postives = 118/202 (58.42%), Query Frame = 1 
Query:   82 PISLLGYLRVEVFGAEDHGVVDTQANRTVRNFLTVPRQLERLLLFGMLVCLDTFLYVTTFLPIRIVIGL---VTTLFSLVTSRRTRPTVNRPLVYDWMRGATIAAALCCLQFLEMSRVYHYIRGQAMVKLYVLIAMVEIFDKLMCSFGQDALDSLYLSTVHKKKR--RVLVHFAIVCVTACLHSLLLFVHVTTLTVAVNSSD 672
            P  L  +   E+FG  D    D      V+NF  VP   E+L LFG+L+ LD+FLYV T++P+RI+      VT+ F     RRT         YD M    +      L  ++MSRVYH IRGQAM+KLYVL  M+EIFD+L  SFGQD LDSLY ++ +  +R  R+ + FA+  +   LHSLLLF  V T+ VAVNSS+
Sbjct:  171 PFRLSDFFYKEIFGVHDIKQGDGVHLERVQNFFVVPFNTEKLFLFGVLLALDSFLYVFTYMPLRILFACGCAVTSSFQARVFRRTH-------FYDLMVAVIMTVGTTVLGHVDMSRVYHAIRGQAMIKLYVLFTMIEIFDRLFSSFGQDVLDSLYYTSKYYPRRVMRMFLDFAVAIIYVVLHSLLLFAQVVTMNVAVNSSN 365
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig9521.20514.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FP16_ECTSI1.150e-11694.20Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KZ60_9PHAE1.290e-5072.99Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YQB0_9STRA7.540e-4473.64Eukaryotic membrane protein family-domain-containi... [more]
A0A7S1U4H5_9STRA3.320e-4144.64Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A6H5KXP0_9PHAE1.510e-4084.76Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A662WLZ5_9STRA3.630e-3845.73Uncharacterized protein n=2 Tax=Nothophytophthora ... [more]
F0Y8H1_AURAN6.660e-3843.48Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
D0NR04_PHYIT3.600e-3745.54Uncharacterized protein n=11 Tax=Phytophthora TaxI... [more]
A0A225W063_9STRA9.230e-3745.54Uncharacterized protein n=1 Tax=Phytophthora megak... [more]
A0A3M6V9N5_9STRA4.260e-3644.55Uncharacterized protein n=2 Tax=Peronospora effusa... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig9521contigS-firma_M_contig9521:593..3253 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-19
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score362.1
Seed ortholog evalue1.9e-97
Seed eggNOG ortholog2880.D7FP16
Preferred nameTAPT1
GOsGO:0000003,GO:0001501,GO:0001503,GO:0001701,GO:0003006,GO:0003674,GO:0004888,GO:0004930,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005783,GO:0005788,GO:0005789,GO:0005813,GO:0005815,GO:0005856,GO:0005929,GO:0006457,GO:0006935,GO:0007154,GO:0007165,GO:0007186,GO:0007275,GO:0008104,GO:0008150,GO:0009605,GO:0009790,GO:0009791,GO:0009792,GO:0009793,GO:0009856,GO:0009888,GO:0009987,GO:0010154,GO:0010183,GO:0010638,GO:0012505,GO:0014031,GO:0014032,GO:0014033,GO:0015630,GO:0016020,GO:0016021,GO:0016520,GO:0022414,GO:0023052,GO:0030154,GO:0030176,GO:0031224,GO:0031227,GO:0031344,GO:0031346,GO:0031974,GO:0031984,GO:0032501,GO:0032502,GO:0032507,GO:0033036,GO:0033043,GO:0033365,GO:0034613,GO:0034975,GO:0035437,GO:0036064,GO:0038023,GO:0040011,GO:0042175,GO:0042221,GO:0042330,GO:0042995,GO:0043009,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044087,GO:0044089,GO:0044422,GO:0044424,GO:0044425,GO:0044430,GO:0044432,GO:0044441,GO:0044444,GO:0044446,GO:0044463,GO:0044464,GO:0044706,GO:0045185,GO:0045724,GO:0048316,GO:0048468,GO:0048513,GO:0048518,GO:0048522,GO:0048608,GO:0048706,GO:0048731,GO:0048762,GO:0048856,GO:0048863,GO:0048864,GO:0048868,GO:0048869,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0050918,GO:0051094,GO:0051128,GO:0051130,GO:0051179,GO:0051235,GO:0051239,GO:0051240,GO:0051641,GO:0051651,GO:0051704,GO:0051716,GO:0060089,GO:0060485,GO:0060491,GO:0061035,GO:0061036,GO:0061458,GO:0065007,GO:0065008,GO:0070013,GO:0070727,GO:0070972,GO:0071944,GO:0072595,GO:0098827,GO:0120025,GO:0120032,GO:0120034,GO:0120035,GO:0120038,GO:1902017,GO:1902115,GO:1902117,GO:1903010,GO:1903012,GO:1904888,GO:2000026
EggNOG free text desc.positive regulation of bone development
EggNOG OGsKOG2490@1,KOG2490@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionMembrane protein,Tapt1/CMV receptor
Ec32 orthologEc-05_001770.1
Exons4
Model size675
Cds size675
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig9521.20514.1prot_S-firma_M_contig9521.20514.1Sphaerotrichia firma Sfir_13m malepolypeptideS-firma_M_contig9521 593..3253 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622828787.3698428-CDS-S-firma_M_contig9521:592..7691622828787.3698428-CDS-S-firma_M_contig9521:592..769Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig9521 593..769 -
1697105162.4146857-CDS-S-firma_M_contig9521:592..7691697105162.4146857-CDS-S-firma_M_contig9521:592..769Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig9521 593..769 -
1622828787.3824146-CDS-S-firma_M_contig9521:1002..11831622828787.3824146-CDS-S-firma_M_contig9521:1002..1183Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig9521 1003..1183 -
1697105162.4280086-CDS-S-firma_M_contig9521:1002..11831697105162.4280086-CDS-S-firma_M_contig9521:1002..1183Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig9521 1003..1183 -
1622828787.3967667-CDS-S-firma_M_contig9521:2534..26981622828787.3967667-CDS-S-firma_M_contig9521:2534..2698Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig9521 2535..2698 -
1697105162.4415371-CDS-S-firma_M_contig9521:2534..26981697105162.4415371-CDS-S-firma_M_contig9521:2534..2698Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig9521 2535..2698 -
1622828787.4101932-CDS-S-firma_M_contig9521:3100..32531622828787.4101932-CDS-S-firma_M_contig9521:3100..3253Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig9521 3101..3253 -
1697105162.44985-CDS-S-firma_M_contig9521:3100..32531697105162.44985-CDS-S-firma_M_contig9521:3100..3253Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig9521 3101..3253 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-firma_M_contig9521.20514.1

>prot_S-firma_M_contig9521.20514.1 ID=prot_S-firma_M_contig9521.20514.1|Name=mRNA_S-firma_M_contig9521.20514.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=225bp
AGEEDGVAVKGADGGAGAFAEGGVVAGPISLLGYLRVEVFGAEDHGVVDT
QANRTVRNFLTVPRQLERLLLFGMLVCLDTFLYVTTFLPIRIVIGLVTTL
FSLVTSRRTRPTVNRPLVYDWMRGATIAAALCCLQFLEMSRVYHYIRGQA
MVKLYVLIAMVEIFDKLMCSFGQDALDSLYLSTVHKKKRRVLVHFAIVCV
TACLHSLLLFVHVTTLTVAVNSSDQ
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mRNA from alignment at S-firma_M_contig9521:593..3253-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-firma_M_contig9521.20514.1 ID=mRNA_S-firma_M_contig9521.20514.1|Name=mRNA_S-firma_M_contig9521.20514.1|organism=Sphaerotrichia firma Sfir_13m male|type=mRNA|length=2661bp|location=Sequence derived from alignment at S-firma_M_contig9521:593..3253- (Sphaerotrichia firma Sfir_13m male)
GCGGGTGAAGAGGATGGGGTTGCTGTCAAGGGGGCCGATGGCGGGGCTGG
CGCTTTTGCCGAGGGGGGCGTGGTGGCGGGGCCTATCTCGCTGTTGGGGT
ACCTCCGGGTGGAGGTGTTCGGGGCGGAGGATCATGGGGTGGTGGACACG
CAGGTGGGTTGCTGTTGTTGTTGTTGCTGTTGTTGTTGTTGTTGTTGTTG
TTGTTGTTGTCGTTGTTGTTCTTATTGCTGTTGTTGTCGTTGTCGTTGCT
GTTGTTGTTGTTGTCGTTGTTGTTGTTTTTGTTTTTGTTGTTGTTGTTGT
TGTTTGTTGTTTGTTGTTTGTTGTTGTTGGTGGTGGTTGTGGTGGTGTTT
TTTTTCCTCCCGTTGTTGGATTCTGTCTGATTGACCACTTTTAACCTTTA
GTGTGTGTGTGGGTGTGTTTTCACGTACATGCTGCTGCTGAATCCGGGCG
TCAGTAGAAAAACAAAAATATACTGCTGCTGCTGCTGCTGCTGCTGCTGC
TGATGATGATCATGCTGCTGCTCTTGTTGCTGTTTCGCGCCAATGTCCCA
ACCAGGCCAACCGCACGGTCAGAAACTTTCTGACGGTGCCGAGGCAGCTA
GAGAGGCTGCTGCTCTTCGGGATGCTGGTGTGCCTCGACACCTTCCTGTA
CGTCACCACCTTCCTGCCGATCAGGATAGTCATCGGTCTCGTGACGACTC
TCTTCTCTCTCGTCACCAGGTGGGTGTTTTGCTTGCGGCAGCAGCAGTAG
CAGCGGTGGTAGCAGTTGTTTTTGTTGTTGTTGTTGTTGTTGTTGTTGTT
GTTGTTGTTGTTGTCGTCGTCGTTTTCTCGTGTTAATGGGAGACACACGT
TTGTCTTGTTGTCAGGCCGACGAGCACCGCAGCAGTGCCTCCTCCGTCGC
CGCCGGCGAGGGTCGCGAGACTCCGGAACAACGTTTTTTGCATTTATTTA
TTTATTTACTTTTATTTTATGTTGTTTTATTACTCATTGATTTTTTCGAC
TGCTGTAGTACCCACACCGGCCTGACGTACATCTCTCGCTCAGAGATGCC
CGGGCTCTCCCGCACATGGCTAAAGCGCGGCGATGAAGAACGAACAGCAG
TTGTATTTACATGGCTAAAGCGCGGCGATGAACAACGAACAACAGTTGTA
TTACATGGCTAAAGCGCGGCGATGAAGAACGAACAGCAGTTGTATACATG
GCTAAAGCGCGGCGATGAACAACGAACAACAGTTGTATTACATGGCTAAA
GCGCGGCAATGAAGAACGAACAGCAGTTGTAGTTGTATTCCATGGCTAAA
GCGCGGCGATGAACAACGAACAACAGTTGTATTACATGGCTAAAGCGCGG
CGATGAACAACGAACAGCAGTTGTATTCACCCCACGAGAGCACCGTCGGT
TCTCATCACACCCAGAGAACGTGCGTTGTGATCTTGACGTGGATACTTTC
CTTATTGTCGCTCTTGCGGACCCTCCGGGCCCCGTTATTATATTTCAGTC
CTGCTGTACTGCTGCTGTACCTTTTCTAGGTTAAGATAGCCTGTGTGACA
AACTGATCTTGACGTGGATACTTTCATTTTGTCGCTTTGCGGACCCTCCG
GGTCCCGTTTTTATGTTTTTATCTATAATTAATGTTGTGCTGTACCTTTT
CTAGGTTAGGATAGCCTGTGTGACAAACGGGAATCGACCGCGGCTTTTGG
ATCAGCACGGACAAAGAGAGGTACTGGATGGTACTGGGTGGAGAGCTTCG
GAACGTTTTTTTTAATGTGAAGATGTGGAGACAACAACAAACAACGACAA
CAACACCAACAACATTAACAACACCACAAACAGAGGCAACAACAACAACA
ACAACAACAACAACACCAACAACATTTTCTCAAATCCTCCTCAACTCCCT
GTACACATTGTGTTTTGCACGGACGTCCGAACGGACGGACCAACGGCCCT
TTTTTTTTTGCTGTACCGGTACATCGTGTTCTAGACCATGCTGCGCGGCA
CGTCTACAGCACCCCATCTGTTACTGATTTATTTTTGTATCTGTTGCTGA
TTAATTTATTTTTTTTCAAGCAGACGAACCAGGCCGACGGTAAACCGGCC
GCTGGTGTACGACTGGATGCGCGGGGCGACCATCGCGGCCGCGCTGTGCT
GCCTGCAGTTCCTCGAGATGTCGAGGGTGTACCACTACATCCGGGGGCAA
GCGATGGTGAAGCTGTACGTGCTGATCGCGATGGTGGAGATCTTCGACAA
GGTGAATGGAGGCTGTGGCGTCGTCGTTGTTGCTGGACGTGGAAGTGGAA
GTCCGCGCCACCACTTGTCCGCCATGACACCAAACACCCCACATGTATAT
AATTAATACATGTGTGTGTTTTTTATTTATTTTGTTTTTGTTTTTGGGGA
GACAATATATGCACACATCATTCATACATACATTCGTGCAACTAACGATC
GAACCGCTCGCCGTCAAACGCGCCGAGCGCGCAGCTGATGTGCTCCTTCG
GGCAAGACGCGCTGGACTCGCTGTACCTGAGCACGGTGCACAAGAAGAAG
CGGCGGGTGCTGGTGCACTTCGCGATCGTCTGCGTCACGGCCTGCCTGCA
CAGCCTCCTGCTCTTCGTGCACGTCACCACGCTGACCGTGGCGGTCAACT
CCTCCGACCAG
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Coding sequence (CDS) from alignment at S-firma_M_contig9521:593..3253-

>mRNA_S-firma_M_contig9521.20514.1 ID=mRNA_S-firma_M_contig9521.20514.1|Name=mRNA_S-firma_M_contig9521.20514.1|organism=Sphaerotrichia firma Sfir_13m male|type=CDS|length=1350bp|location=Sequence derived from alignment at S-firma_M_contig9521:593..3253- (Sphaerotrichia firma Sfir_13m male)
GCGGGTGAAGAGGATGGGGTTGCTGTCAAGGGGGCCGATGGCGGGGCTGG
CGCTTTTGCCGAGGGGGGCGTGGTGGCGGGGCCTATCTCGCTGTTGGGGT
ACCTCCGGGTGGAGGTGTTCGGGGCGGAGGATCATGGGGTGGTGGACACG
CAGGCGGGTGAAGAGGATGGGGTTGCTGTCAAGGGGGCCGATGGCGGGGC
TGGCGCTTTTGCCGAGGGGGGCGTGGTGGCGGGGCCTATCTCGCTGTTGG
GGTACCTCCGGGTGGAGGTGTTCGGGGCGGAGGATCATGGGGTGGTGGAC
ACGCAGGCCAACCGCACGGTCAGAAACTTTCTGACGGTGCCGAGGCAGCT
AGAGAGGCTGCTGCTCTTCGGGATGCTGGTGTGCCTCGACACCTTCCTGT
ACGTCACCACCTTCCTGCCGATCAGGATAGTCATCGGTCTCGTGACGACT
CTCTTCTCTCTCGTCACCAGGCCAACCGCACGGTCAGAAACTTTCTGACG
GTGCCGAGGCAGCTAGAGAGGCTGCTGCTCTTCGGGATGCTGGTGTGCCT
CGACACCTTCCTGTACGTCACCACCTTCCTGCCGATCAGGATAGTCATCG
GTCTCGTGACGACTCTCTTCTCTCTCGTCACCAGCAGACGAACCAGGCCG
ACGGTAAACCGGCCGCTGGTGTACGACTGGATGCGCGGGGCGACCATCGC
GGCCGCGCTGTGCTGCCTGCAGTTCCTCGAGATGTCGAGGGTGTACCACT
ACATCCGGGGGCAAGCGATGGTGAAGCTGTACGTGCTGATCGCGATGGTG
GAGATCTTCGACAAGCAGACGAACCAGGCCGACGGTAAACCGGCCGCTGG
TGTACGACTGGATGCGCGGGGCGACCATCGCGGCCGCGCTGTGCTGCCTG
CAGTTCCTCGAGATGTCGAGGGTGTACCACTACATCCGGGGGCAAGCGAT
GGTGAAGCTGTACGTGCTGATCGCGATGGTGGAGATCTTCGACAAGCTGA
TGTGCTCCTTCGGGCAAGACGCGCTGGACTCGCTGTACCTGAGCACGGTG
CACAAGAAGAAGCGGCGGGTGCTGGTGCACTTCGCGATCGTCTGCGTCAC
GGCCTGCCTGCACAGCCTCCTGCTCTTCGTGCACGTCACCACGCTGACCG
TGGCGGTCAACTCCTCCGACCAGCTGATGTGCTCCTTCGGGCAAGACGCG
CTGGACTCGCTGTACCTGAGCACGGTGCACAAGAAGAAGCGGCGGGTGCT
GGTGCACTTCGCGATCGTCTGCGTCACGGCCTGCCTGCACAGCCTCCTGC
TCTTCGTGCACGTCACCACGCTGACCGTGGCGGTCAACTCCTCCGACCAG
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