mRNA_S-firma_M_contig9507.20496.1 (mRNA) Sphaerotrichia firma Sfir_13m male
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Overview
Homology
BLAST of mRNA_S-firma_M_contig9507.20496.1 vs. uniprot
Match: D8LH12_ECTSI (Zn-dependent peptidase (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH12_ECTSI) HSP 1 Score: 359 bits (921), Expect = 1.300e-123 Identity = 187/217 (86.18%), Postives = 202/217 (93.09%), Query Frame = 1
Query: 1 MMETGTSDMDRVQLSRRIGSQTGGVYATFLADQPSAGGAVADPGALKQYLFLRGKAVSDKVPAMLSIMLDVLTDANLDSQQRVVEMLKESKARLASSIQGSGHSFANTRLEARYTVDGYLGELQGGVTYINTVKDMLEEAENEWPKMLARLQRVRATLLSKKKFLAVLEGSSVAVSEFLSRLPEETEGAASNTAPLSDQLKLLEDKDEGFVVPTQVS 651
MMETGTS+MDRVQLSRRIGSQTGGVYATFLADQPSAGGAVADPGALKQYLFLRGKAVSDKV A+LDSQQRVVEMLKESKARLASSIQGSGHSFANTRLEARYTVDGYLGELQGGVTY+NTVKDML+EAEN+WPKML RLQRVRATLLSKK+FL+VL+GSS AVSEFLSRLPEETEGAA+NTAPL++Q+KLL++KDEGFVVPTQV+
Sbjct: 1 MMETGTSEMDRVQLSRRIGSQTGGVYATFLADQPSAGGAVADPGALKQYLFLRGKAVSDKVXXXXXXXXXXXXXAHLDSQQRVVEMLKESKARLASSIQGSGHSFANTRLEARYTVDGYLGELQGGVTYVNTVKDMLDEAENDWPKMLKRLQRVRATLLSKKQFLSVLDGSSEAVSEFLSRLPEETEGAATNTAPLAEQVKLLQEKDEGFVVPTQVN 217
BLAST of mRNA_S-firma_M_contig9507.20496.1 vs. uniprot
Match: A0A6H5LB25_9PHAE (M16C_associated domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LB25_9PHAE) HSP 1 Score: 375 bits (963), Expect = 6.210e-120 Identity = 196/224 (87.50%), Postives = 211/224 (94.20%), Query Frame = 1
Query: 1 MMETGTSDMDRVQLSRRIGSQTGGVYATFLADQPSAGGAVADPGALKQYLFLRGKAVSDKVPAMLSIMLDVLTDANLDSQQRVVEMLKESKARLASSIQGSGHSFANTRLEARYTVDGYLGELQGGVTYINTVKDMLEEAENEWPKMLARLQRVRATLLSKKKFL-------AVLEGSSVAVSEFLSRLPEETEGAASNTAPLSDQLKLLEDKDEGFVVPTQVS 651
MMETGTS MDRVQLSRRIGSQTGG+YATFLADQPSAGGAVADPGALKQYLFLRGKAV+DKVP MLSIM DV+TDANLDSQQRVVEMLKESKARLASSIQGSGHSFANTRLEARYTVDGYLGELQGGVTY+NTVKDML+EAEN+WPKML RLQRVRATLLSKK+FL +VL+GSS AVSEFLSRLPEETEGA +NTAPL++Q+KLLE+KDEGFVVPTQV+
Sbjct: 669 MMETGTSKMDRVQLSRRIGSQTGGIYATFLADQPSAGGAVADPGALKQYLFLRGKAVADKVPDMLSIMFDVMTDANLDSQQRVVEMLKESKARLASSIQGSGHSFANTRLEARYTVDGYLGELQGGVTYVNTVKDMLDEAENDWPKMLKRLQRVRATLLSKKQFLVNLTGDKSVLDGSSEAVSEFLSRLPEETEGAVTNTAPLAEQVKLLEEKDEGFVVPTQVN 892
BLAST of mRNA_S-firma_M_contig9507.20496.1 vs. uniprot
Match: A0A835YY54_9STRA (Metalloenzyme, LuxS/M16 peptidase-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YY54_9STRA) HSP 1 Score: 199 bits (505), Expect = 6.340e-55 Identity = 106/229 (46.29%), Postives = 160/229 (69.87%), Query Frame = 1
Query: 1 MMETGTSDMDRVQLSRRIGSQTGGVYATFLAD-QPSAGGAVADPGALKQYLFLRGKAVSDKVPAMLSIMLDVLTDANLDSQQRVVEMLKESKARLASSIQGSGHSFANTRLEARYTVDGYLGELQGGVTYINTVKDMLEEAENEWPKMLARLQRVRATLLSKKKFLA-------VLEGSSVAVSEFLSRLPEETEGAASNTAPLSDQLKLLEDKDEGFVVPTQVSKYAG 663
++ETG MDRV+L+R IG+QTGGVY T L + GG +A + YLFLRGKAVS K P +L I+ V+T+A LDSQQR +E+LKE+KARL +SI GSGHS+A+ R+E+RYT++GYL E+ GG++ + TVK +L+ AE++WP +LARL+++RA+++++ L VL+ ++ A+S F++ +P EG S++ + + L+ ++EGF V TQV+ Y G
Sbjct: 658 LLETGAGSMDRVELTRHIGTQTGGVYCTSLTGTKMGGGGVIASSDDVVGYLFLRGKAVSAKTPELLDIVRTVVTEARLDSQQRAIEILKETKARLDASIVGSGHSYASMRIESRYTLEGYLNEISGGISSVETVKSVLKMAEDDWPALLARLEKIRASIVTRNNLLINLTGDQEVLDAAAPAISNFINSIPGAGEGVVSHSN-WAAEANLIPARNEGFAVQTQVN-YVG 884
BLAST of mRNA_S-firma_M_contig9507.20496.1 vs. uniprot
Match: A0A7S2RFS8_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RFS8_9STRA) HSP 1 Score: 177 bits (449), Expect = 2.370e-47 Identity = 107/246 (43.50%), Postives = 149/246 (60.57%), Query Frame = 1
Query: 1 MMETGTSDMDRVQLSRRIGSQTGG----VYATFLADQPSAGGAVADPGALKQYLFLRGKAVSDKVPAMLSIMLDVLTDANLDSQQRVVEMLKESKARLASSIQGSGHSFANTRLEARYTVDGYLGELQGGVTYINTVKDMLEEAENEWPKMLARLQRVRATLLSKKK-----FL------AVLEGSSVAVSEFLSRLPEETEGAASN----------TAPLSDQLKLLEDKDEGFVVPTQVSKYAG 663
M + G ++ ++LSR+IG+ TGG ++ T + + G V+D + L L+GKA +DK+ + SI +LT ANLDSQ++V+EMLKESK+ L S IQGSGHSFANTR+ +RYT GY+ E G+TY+N+VK MLEEAE +WP LARL+++R T+L + FL AV++G V FL LP + +G+A T ++ +K DEGFVVPTQVS Y G
Sbjct: 686 MKDNGAGELSDIELSRKIGTHTGGAGVGLFTTTIRSETEEEGTVSDGNHMLTKLTLQGKATTDKIDELFSIFSLMLTKANLDSQKKVIEMLKESKSGLESGIQGSGHSFANTRMSSRYTPAGYIDEKMSGITYLNSVKIMLEEAEKDWPTFLARLEKMRDTILDNETCRNGMFLDITGEKAVMDGIQSNVESFLENLPGDAKGSALIDFHNEEHPWLTQAKTEMVKNAPIADEGFVVPTQVS-YVG 930
BLAST of mRNA_S-firma_M_contig9507.20496.1 vs. uniprot
Match: A0A7S2V8U1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V8U1_9STRA) HSP 1 Score: 177 bits (448), Expect = 3.120e-47 Identity = 99/230 (43.04%), Postives = 148/230 (64.35%), Query Frame = 1
Query: 1 MMETGTSDMDRVQLSRRIGSQTGGVYATFLADQP-SAGGAVADPGALKQYLFLRGKAVSDKVPAMLSIMLDVLTDANLDSQQRVVEMLKESKARLASSIQGSGHSFANTRLEARYTVDGYLGELQGGVTYINTVKDMLEEAENEWPKMLARLQRVRATLLSKKKFLA-------VLEGSSVAVSEFLSRLPEETEGAASNTAPLSDQL-KLLEDKDEGFVVPTQVSKYAG 663
+ + GTS++DRV L R+IG+ TGG+ A+F DQ ++GG V+DP + +LF+RGK V K+ + ++ D+L DA LD+QQRV+E+LK+S A SS+ SGHSFA +RL+ARYT Y+ E+ GG++YI T+K + E+AE +WP +LARL+ +R LLSK L VL+ + ++ F+ ++P AP ++ LL ++E FVVPTQV+ Y G
Sbjct: 664 LKDVGTSELDRVALDRKIGTHTGGISASFSVDQGYTSGGKVSDPSDVNGHLFVRGKCVVSKIDMLFGLVNDILADAELDNQQRVLELLKQSMAGYQSSVLSSGHSFAASRLDARYTTSDYIDEMTGGISYIETLKTLTEQAEKDWPSLLARLEGIRDKLLSKAGMLINLTADQEVLDAAKEPMASFIGKVPSR------EVAPQRWEVGSLLPVENEAFVVPTQVN-YVG 886
BLAST of mRNA_S-firma_M_contig9507.20496.1 vs. uniprot
Match: A0A7S1XMW9_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XMW9_9STRA) HSP 1 Score: 176 bits (446), Expect = 5.680e-47 Identity = 108/235 (45.96%), Postives = 148/235 (62.98%), Query Frame = 1
Query: 1 MMETGTSDMDRVQLSRRIGSQTGGVYATFLAD--QPSAGGAVADPGALKQYLFLRGKAVSDKVPAMLSIMLDVLTDANLDSQQRVVEMLKESKARLASSIQGSGHSFANTRLEARYTVDGYLGELQGGVTYINTVKDMLEEAENEWPKMLARLQRVRATLLSKKKFLAVLEG------SSVAVSE-FLSRLPEE-----TEGAASNTAPLSDQLKLLEDKDEGFVVPTQVSKYAG 663
++E GT MD ++RRIG+ TGGV A L D + AG AVA + YLFLRGKAV DK+P + SI D+ TD NLD Q RV+EML+E++A + SS+ SGHS+A TRL AR T G L E GG++Y+ TVK++LE+AEN+WP +LARL+ ++ ++ + L G S+ V+E F + LP++ EG + T LS ++ L D DEG VVPTQV+ Y G
Sbjct: 611 LLECGTKSMDETAMTRRIGTHTGGVRAALLRDLVEDPAGAAVAGDE-IVHYLFLRGKAVPDKIPELFSIFKDIFTDVNLDRQSRVLEMLRETRASMESSVVTSGHSYAATRLAARTTGLGVLREKVGGISYLETVKELLEQAENDWPALLARLEAIQKKIVDADALIVNLTGDKEVLGSATPVAESFAAGLPKQGKVAFPEGRTTRTVDLSG-MERLPDVDEGLVVPTQVN-YVG 842
BLAST of mRNA_S-firma_M_contig9507.20496.1 vs. uniprot
Match: A0A7R9U9I1_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U9I1_9STRA) HSP 1 Score: 172 bits (435), Expect = 1.220e-46 Identity = 109/235 (46.38%), Postives = 146/235 (62.13%), Query Frame = 1
Query: 1 MMETGTSDMDRVQLSRRIGSQTGGVYATFLAD---QPSAGGAVADPGALKQYLFLRGKAVSDKVPAMLSIMLDVLTDANLDSQQRVVEMLKESKARLASSIQGSGHSFANTRLEARYTVDGYLGELQGGVTYINTVKDMLEEAENEWPKMLARLQRVRATLLSKKKFLAVLEG------SSVAVSE-FLSRLPEET--EGAASNTAPLSD--QLKLLEDKDEGFVVPTQVSKYAG 663
++E GT+ D L+RRIG TGGV + L D P G + + YLFLRGKAV DKV + +IM D+LTD NLD Q RV+EML+E+KA + SSI SGH+FA +RL A T G L E GGVTY+NTV+++LE+AENEWP +L+RLQ+++ TLL+ + L G +SV V+E F + LP++ + AA + P D + L EG VVPTQV+ Y G
Sbjct: 168 LLECGTNKEDETTLTRRIGRHTGGVRSAILRDLVEHPE--GKCVEGDEIVHYLFLRGKAVPDKVSELFAIMKDILTDVNLDRQSRVIEMLRETKASMESSIVTSGHAFAASRLAAHDTGFGVLREQTGGVTYLNTVRELLEQAENEWPSLLSRLQKIQETLLNSNTLVVNLTGDKEVLSASVPVAETFATDLPKKASVDVAADRSVPTLDLRDVPRLPAVSEGLVVPTQVN-YVG 399
BLAST of mRNA_S-firma_M_contig9507.20496.1 vs. uniprot
Match: A0A7S4MIS0_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MIS0_9STRA) HSP 1 Score: 173 bits (439), Expect = 5.240e-46 Identity = 106/247 (42.91%), Postives = 149/247 (60.32%), Query Frame = 1
Query: 1 MMETGTSDMDRVQLSRRIGSQTGGVYATFLA----DQPSAGGAVADPGALKQYLFLRGKAVSDKVPAMLSIMLDVLTDANLDSQQRVVEMLKESKARLASSIQGSGHSFANTRLEARYTVDGYLGELQGGVTYINTVKDMLEEAENEWPKMLARLQRVRATLLSKKKFL-----------AVLEGSSVAVSEFLSRLP------EETEGAASNTAPLSDQLKLLEDK-----DEGFVVPTQVSKYAG 663
++ETG D+ VQLSRR+G TGG+ A+ L ++ A +D + LFLRGK+ +DK + S+ +LTDANLDS +++VE+L+E+K R+ SS+Q +GHS+ANTRL +RYT GY+GE GG+TY++TVK++L+ AEN+WP +LARL+ +R+ LL + K V+E + V FLS LP E+ + S P Q K DEGFVVPTQVS Y G
Sbjct: 705 LLETGAGDLSDVQLSRRMGIHTGGISASTLMVPVFEEGQDESAASDGTKMITKLFLRGKSTADKAGELFSLYNLILTDANLDSPKKIVEILRETKTRMESSVQSAGHSYANTRLASRYTPSGYIGEKMGGITYLDTVKELLDAAENDWPSVLARLEGIRSALLKQTKCRDGMILDITGDKRVMETIAPEVESFLSNLPGDAAPSEKFQDFYSEDHPWVTQAKSEMSAAAPLVDEGFVVPTQVS-YVG 950
BLAST of mRNA_S-firma_M_contig9507.20496.1 vs. uniprot
Match: A0A7R9U8K2_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U8K2_9STRA) HSP 1 Score: 172 bits (435), Expect = 1.790e-45 Identity = 109/235 (46.38%), Postives = 146/235 (62.13%), Query Frame = 1
Query: 1 MMETGTSDMDRVQLSRRIGSQTGGVYATFLAD---QPSAGGAVADPGALKQYLFLRGKAVSDKVPAMLSIMLDVLTDANLDSQQRVVEMLKESKARLASSIQGSGHSFANTRLEARYTVDGYLGELQGGVTYINTVKDMLEEAENEWPKMLARLQRVRATLLSKKKFLAVLEG------SSVAVSE-FLSRLPEET--EGAASNTAPLSD--QLKLLEDKDEGFVVPTQVSKYAG 663
++E GT+ D L+RRIG TGGV + L D P G + + YLFLRGKAV DKV + +IM D+LTD NLD Q RV+EML+E+KA + SSI SGH+FA +RL A T G L E GGVTY+NTV+++LE+AENEWP +L+RLQ+++ TLL+ + L G +SV V+E F + LP++ + AA + P D + L EG VVPTQV+ Y G
Sbjct: 687 LLECGTNKEDETTLTRRIGRHTGGVRSAILRDLVEHPE--GKCVEGDEIVHYLFLRGKAVPDKVSELFAIMKDILTDVNLDRQSRVIEMLRETKASMESSIVTSGHAFAASRLAAHDTGFGVLREQTGGVTYLNTVRELLEQAENEWPSLLSRLQKIQETLLNSNTLVVNLTGDKEVLSASVPVAETFATDLPKKASVDVAADRSVPTLDLRDVPRLPAVSEGLVVPTQVN-YVG 918
BLAST of mRNA_S-firma_M_contig9507.20496.1 vs. uniprot
Match: A0A448Z7F8_9STRA (M16C_associated domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z7F8_9STRA) HSP 1 Score: 170 bits (430), Expect = 8.390e-45 Identity = 104/246 (42.28%), Postives = 149/246 (60.57%), Query Frame = 1
Query: 1 MMETGTSDMDRVQLSRRIGSQTGGVYATFLAD----QPSAGGAVADPGALKQYLFLRGKAVSDKVPAMLSIMLDVLTDANLDSQQRVVEMLKESKARLASSIQGSGHSFANTRLEARYTVDGYLGELQGGVTYINTVKDMLEEAENEWPKMLARLQRVRATLLSKKKFL-----------AVLEGSSVAVSEFLSRLPEETEGAASNT---------APLSDQL-KLLEDKDEGFVVPTQVSKYAG 663
MMETG + D+V LSRRIG+ TGG+ T L + S+ V D L+ L +RGKA SD V + ++M VLTDAN DSQ RVVEMLKE+KA + + I GH NTR++ARY V GY+ E+ GG+ ++TV+ +L++A+N+WP +LARL+ +R+T+L++ VLE +V +FL+ LP +++G AP+ + +L+ KDEGFV+PTQVS Y G
Sbjct: 680 MMETGAGEYDQVALSRRIGTYTGGLGVTTLTTAVHPEGSSQKTVIDGNHLQSKLLVRGKATSDNVGELFALMKTVLTDANFDSQSRVVEMLKETKAGMEAGIGAGGHQAINTRMKARYRVGGYIDEVMGGIAQLDTVRSLLDQAQNDWPSLLARLENMRSTILNENICRDGMVLDITGDKVVLEKVQPSVDQFLTDLPGKSDGEKLPNFYKDEHPWVAPIKKLMNELVPIKDEGFVLPTQVS-YVG 924 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig9507.20496.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_M_contig9507.20496.1 >prot_S-firma_M_contig9507.20496.1 ID=prot_S-firma_M_contig9507.20496.1|Name=mRNA_S-firma_M_contig9507.20496.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=233bp MMETGTSDMDRVQLSRRIGSQTGGVYATFLADQPSAGGAVADPGALKQYLback to top mRNA from alignment at S-firma_M_contig9507:120..3491+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_M_contig9507.20496.1 ID=mRNA_S-firma_M_contig9507.20496.1|Name=mRNA_S-firma_M_contig9507.20496.1|organism=Sphaerotrichia firma Sfir_13m male|type=mRNA|length=3372bp|location=Sequence derived from alignment at S-firma_M_contig9507:120..3491+ (Sphaerotrichia firma Sfir_13m male)back to top Coding sequence (CDS) from alignment at S-firma_M_contig9507:120..3491+ >mRNA_S-firma_M_contig9507.20496.1 ID=mRNA_S-firma_M_contig9507.20496.1|Name=mRNA_S-firma_M_contig9507.20496.1|organism=Sphaerotrichia firma Sfir_13m male|type=CDS|length=1398bp|location=Sequence derived from alignment at S-firma_M_contig9507:120..3491+ (Sphaerotrichia firma Sfir_13m male)back to top |