mRNA_S-firma_M_contig9490.20477.1 (mRNA) Sphaerotrichia firma Sfir_13m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-firma_M_contig9490.20477.1
Unique NamemRNA_S-firma_M_contig9490.20477.1
TypemRNA
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Homology
BLAST of mRNA_S-firma_M_contig9490.20477.1 vs. uniprot
Match: D7FZW8_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZW8_ECTSI)

HSP 1 Score: 489 bits (1258), Expect = 5.150e-161
Identity = 268/421 (63.66%), Postives = 317/421 (75.30%), Query Frame = 1
Query:    1 MASGFSDAGTQAANLALTIGSNAADALSFAAELGEELPFISAVLKTLKAIRDKVETVRSNRDGLNALEERCTYVTACVVVKCRQNSRSEMDVTPLEDSVKAVWKLVERCSRRGKVSRVLKASSDKDEIAGLDARVDRLTGDLGLAGIAILEGKADNMKVLLVKI--LMSNIPKPPTKRANVPTATPALKSWHVERRHVMKTVLEALAGDGGPRLVGLVGDSGSGKTTAVSEIVRSIEARAAFHDGIVWLNVNEGAIQRLPSLMLQLARMVYEDVGGCVGRRPTELSDGATYIKECMQRGHGGKGLKSLVVADNVWETEVVSKLLETGMWVLLSTRNAELVACEHGEAVGVDELSEADAKSVLRKAAELAPGVSLPDDAVHLVELCGRVAMDLAFVARWSTVRGRQDGKAWSDAAENIRAEM 1257
            M +  SD+  +AA LAL IGS  +DA+S A +LGEELP I  V KTLKAIR  VETV++NR+ L ALE+RCTY+TAC VVKCR    SE+DV PL+D V+A     ERCSRRGKVSRV+KA SDK EIAGL++ VDRLT DLGLAGIA+LEGK D+MK  L +I   + ++P+   K A VP   P  KSWHVERRH M TVL+AL G     +V L G SGSGKTT  +EIVRS E R AF DGIVWL VNEGA +RLPSLMLQLARMV+E++GG VGR P+   D ATYIK+ ++ GH G+ LK LVVADNVWE +VVSKL+ETGMWVLLSTR+  +V    G+AV VDELS+ADA+SVL++AAEL     LPDDAV L++LCGRVAMD+AFV RWSTVRGR D  +WSDAA  IR EM
Sbjct:    1 MVADISDSAAEAARLALEIGSTISDAVSCAVDLGEELPVIKPVFKTLKAIRTTVETVKNNREELAALEQRCTYITACFVVKCRL-IESEVDVAPLKDCVEAAKNFAERCSRRGKVSRVIKAFSDKSEIAGLNSSVDRLTTDLGLAGIAVLEGKVDDMKKTLDRIDQRLESLPRSFGKLAAVPMGAPVRKSWHVERRHAMATVLDALNGSDRACVVALAGYSGSGKTTVAAEIVRSTEVREAFSDGIVWLPVNEGAKKRLPSLMLQLARMVHEEIGGSVGRVPSASEDSATYIKQRLEEGHKGRRLKCLVVADNVWEEDVVSKLVETGMWVLLSTRDEAVVKRSRGKAVVVDELSQADAESVLKRAAELPRESRLPDDAVDLIKLCGRVAMDVAFVGRWSTVRGRHDPASWSDAASTIRTEM 420          
BLAST of mRNA_S-firma_M_contig9490.20477.1 vs. uniprot
Match: D7FZY7_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZY7_ECTSI)

HSP 1 Score: 482 bits (1240), Expect = 3.420e-158
Identity = 266/443 (60.05%), Postives = 315/443 (71.11%), Query Frame = 1
Query:    1 MASGFSDAGTQAANLALTIGSNAADALSFAAELGEELPF-------ISAVLKTLKAIRDKVETVRSNRDGLNALEERCTYVTACVVVKCRQNSRSEMDVTPLEDSVKAVWKLVERCSRRGKVSRVLKASSDKDEIAGLDARVDRLTGDLGLAGIAILEGKADNMKVLLVKI-----------------LMSNIPKPPTKRANVPTATPALKSWHVERRHVMKTVLEALAGDGGPRLVGLVGDSGSGKTTAVSEIVRSIEARAAFHDGIVWLNVNEGAIQRLPSLMLQLARMVYEDVGGCVGRRPTELSDGATYIKECMQRGHGGKGLKSLVVADNVWETEVVSKLLETGMWVLLSTRNAELVACEHGEAVGVDELSEADAKSVLRKAAELAPGVSLPDDAVHLVELCGRVAMDLAFVARWSTVRGRQDGKAWSDAAENIRAEM 1257
            MA+  S A  +   L L +GS   D+++F AELGE+LPF       +  VLKTL AIR+ VE V++N++ L  L  RC Y+TACVVVK RQ+S SEMD+TP+E+ ++A  +LVERC  RGK++RVL ASSDK+EIA + A +  L  DL LAG+AILEGK  ++  ++ ++                 ++  + K P K A +P ATP  KSWHVER +VM+ V EAL   GGP LVGLVGDSGSGKTTA SEIVRS E R AF DG+VWL VN GA  RLPSLMLQLA M+ E+VGG   RRP    DGA YIKE MQRGHGGKGLK LVVADNVWE EVV KLLETGMWVLLSTR+ ELV    GE VGVDE+SE +A+SVLRKA+EL P   LPDDAV L+ELCGRVAMDLAFV RWSTVRGR D  AWSDAA  +RAEM
Sbjct:    1 MAAKSSGAAAEVTKLGLKMGSATVDSITFMAELGEDLPFGEPVLPHLRPVLKTLTAIRETVENVQNNQEELQTLYRRCVYLTACVVVKSRQSSCSEMDLTPVEECLEAAGELVERCGGRGKMTRVLNASSDKEEIARMKANIRDLEADLSLAGVAILEGKTSDLTAMVERMGTNQAATQEMILANTESIIDRLSKTPAKLAKIPKATPIRKSWHVERLYVMERVFEALTAVGGPHLVGLVGDSGSGKTTAASEIVRSNEVRQAFSDGVVWLTVNHGAKDRLPSLMLQLAHMMCEEVGG---RRPATSDDGAAYIKEKMQRGHGGKGLKCLVVADNVWEKEVVWKLLETGMWVLLSTRDEELVVGSEGEVVGVDEMSEVEAESVLRKASELPPETRLPDDAVDLIELCGRVAMDLAFVGRWSTVRGRSDRTAWSDAAGKVRAEM 440          
BLAST of mRNA_S-firma_M_contig9490.20477.1 vs. uniprot
Match: A0A6H5KRK8_9PHAE (NB-ARC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KRK8_9PHAE)

HSP 1 Score: 480 bits (1235), Expect = 3.850e-157
Identity = 265/444 (59.68%), Postives = 316/444 (71.17%), Query Frame = 1
Query:    1 MASGFSDAGTQAANLALTIGSNAADALSFAAELGEELPFISAVLKTLKAIRDKVETVRSNRDGLNALEERCTYVTACVVVKCRQNSRSEMDVTPLEDSVKAVWKLVERCSRRGKVSRVLKASSDKDEIAGLDARVDRLTGDLGLAGIAILE---------------------GKAD--NMKVLLVKI--LMSNIPKPPTKRANVPTATPALKSWHVERRHVMKTVLEALAGDGGPRLVGLVGDSGSGKTTAVSEIVRSIEARAAFHDGIVWLNVNEGAIQRLPSLMLQLARMVYEDVGGCVGRRPTELSDGATYIKECMQRGHGGKGLKSLVVADNVWETEVVSKLLETGMWVLLSTRNAELVACEHGEAVGVDELSEADAKSVLRKAAELAPGVSLPDDAVHLVELCGRVAMDLAFVARWSTVRGRQDGKAWSDAAENIRAEM 1257
            MA+  +DA  + A +A  +GS AAD + F A+LGEELP +  VL+TL+ IR+KVETV+ N + L  L +RCTY+TAC +VKCR +  +E+DV PLED V AV K VER  +RGK+SRVLKA  DK +I  L  R+  L GDL LAGIA L                      GK    N + LL K   ++  +PKPP K ANVP  TP  KSWHVERR+V +TV +AL  DGGP LVGLVGDSG+GKTTA S IV SI  R  F DGIVWL VNEG    LP LMLQLA+MV+ED+GG VGRRP+   DG  Y+K+ ++ GHGGKGLK LVVADNVWE++VVS+LLETGMW+LLSTR+ ELV   +GE VGVDELSEA+A+SVLR+AAEL+P   LPDDA  L+ELCGRVAMDLAFV RWSTVRGRQD  AWSDAA  +RAEM
Sbjct:    1 MAAYVADATGEVAKIASKMGSAAADVIQFVADLGEELPLLQPVLRTLRIIREKVETVKRNPEDLTVLHQRCTYITACFIVKCR-HGYTELDVAPLEDCVNAVEKFVERYRKRGKISRVLKAVGDKGDIVQLKERLRDLEGDLSLAGIASLAKYLIADPKPCSPVAFAFQERMGKKQEGNHEELLAKTETILRQLPKPPAKVANVPKGTPTHKSWHVERRNVTETVFQALDADGGPHLVGLVGDSGAGKTTAASAIVSSIVVRETFSDGIVWLPVNEGVHDNLPCLMLQLAQMVFEDIGGSVGRRPSGSDDGLAYVKQQVENGHGGKGLKCLVVADNVWESDVVSQLLETGMWILLSTRDEELVKRANGEVVGVDELSEAEAESVLRRAAELSPEARLPDDAKDLIELCGRVAMDLAFVGRWSTVRGRQDRTAWSDAACKVRAEM 443          
BLAST of mRNA_S-firma_M_contig9490.20477.1 vs. uniprot
Match: A0A6H5KLK9_9PHAE (NB-ARC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KLK9_9PHAE)

HSP 1 Score: 456 bits (1174), Expect = 4.740e-150
Identity = 247/418 (59.09%), Postives = 298/418 (71.29%), Query Frame = 1
Query:   58 GSNAADALSFAAELGEELPFISAVLKTLKAIRDKVETVRSNRDGLNALEERCTYVTACVVVKCRQNSRSEMDVTPLEDSVKAVWKLVERCSRRGKVSRVLKASSDKDEIAGLDARVDRLTGDLGLAGIAILEGKADNMKVLLVK-----------------ILMSNIPKPPTKRANVPTATPALKSWHVERRHVMKTVLEALAGDGGPRLVGLVGDSGSGKTTAVSEIVRSIEARAAFHDGIVWLNVNEGAIQRLPSLMLQLARMVYEDVGGCVGRRPTELSDGATYIKECMQRGHGGKGLKSLVVADNVWETEVVSKLLETGMWVLLSTRNAELV-ACEHGEAVGVDELSEADAKSVLRKAAELAPGVSLPDDAVHLVELCGRVAMDLAFVARWSTVRGRQDGKAWSDAAENIRAEM 1257
            G+ A+D L+F  E  + LP I  VLKTLKA+               AL +RCTY+T CV+V+CR+ S S +  TPL + V AV   VERCSRRG +SRVLKA+ DK+EIAGL  R++ L GDL LAGIA + GK +++K LL                   I+ + +   P   A VP  TPA KSWHVERRHVM+ V +AL G+GGPRLVGLVGDSGSGKTTA +EIVRS E R AF DGIVWL+VN+GA +RL +LM+ LAR+V+ED+GG VGRRP  L DGA Y ++ MQ GHGGKGLK LVVADNVWE  V+SKLLETGMWVLLSTR+  LV + E G  VGVDELSE DA SVLR+A+EL+P + LPD+AV LVELCGRVAMD+AFV RWSTVRGR D  AWSDAA  +R+++
Sbjct:    6 GTMASDVLAFLTEASDGLPLIEPVLKTLKAVXXXXXXXXXXXXXXAALYQRCTYITGCVIVRCRKGS-SGLKATPLMECVNAVGAFVERCSRRGMLSRVLKATDDKEEIAGLKQRLEDLEGDLRLAGIATVGGKVEDLKALLEHVDTKQALSHSQTLANHDIMFARVGISPETLATVPAGTPARKSWHVERRHVMRAVCDALPGEGGPRLVGLVGDSGSGKTTAAAEIVRSTEVREAFSDGIVWLSVNDGATERLRALMMHLARVVFEDIGGSVGRRPAGLDDGAAYTRQRMQSGHGGKGLKCLVVADNVWEEAVISKLLETGMWVLLSTRDEALVRSAEGGVVVGVDELSEEDAMSVLRRASELSPELRLPDEAVELVELCGRVAMDVAFVGRWSTVRGRSDRTAWSDAAHKVRSKI 422          
BLAST of mRNA_S-firma_M_contig9490.20477.1 vs. uniprot
Match: A0A6H5KJ30_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ30_9PHAE)

HSP 1 Score: 388 bits (996), Expect = 8.290e-123
Identity = 227/436 (52.06%), Postives = 275/436 (63.07%), Query Frame = 1
Query:    1 MASGFSDAGTQAANLALTIGSNAADALSFAAELGEELPFISAVLKTLKAIRDKVETVRSNRDGLNALEERCTYVTACVVVKCRQNSRSEMDVTPLEDSVKAVWKLVERCSRRGKVSRVLKASSDKDEIAGLDARVDRLTGDLGLAGIAILEGKADNMKVLL-----------------VKILMSNIPKPPTKRANVPTATPALKSWHVERRHVMKTVLEALAGDGGPRLVGLVGDSGSGKTTAVSEIVRSIEARAAFHDGIVWLNVNEGAIQRLPSLMLQLARMVYEDVGGCVGRRPTELSDGATYIKECMQRGHGGKGLKSLVVADNVWETEVVSKLLETGMWVLLSTRNAELVACEHGEAVGVDELSEADAKSVLRKAAELAPGVSLPDDAVHLVELCGRVAMDLAFVARWSTVRGRQDGKAWSDAAENIRAEM 1257
            MA+  S A  +   LAL +GS   D+++F A+L E+LPF                    N++ L  L  RC ++T CV+VK RQ+S SEMDV+P+E+ ++A  +LVERC  RGK++RVL ASSDKD+IA + A +  L  +L LAG+AILEGK  +++  +                  +I+   + K P K A +P +TP  KSWHVER  V++ V E L  DGGP LVGLVGDSGSGKTTA SEIVRS E                    RLPSLMLQLA MVYE++GG   RRP    DG  YIKE M RGHGG+GLK L V DNVWE EVV +LLE GMWVLLSTR+ ELV    GE V V+ELSE +A+SVLRKAAEL P   LPDDAV L+ELCGRVAMDLAF  R STVRGR D  AWS AA  +R EM
Sbjct:    1 MAAESSGAAAEVTKLALKMGSATVDSITFVADLCEDLPF-------------------ENQEELQTLYRRCVFLTTCVIVKSRQSSFSEMDVSPVEECLEAAGELVERCGGRGKMTRVLNASSDKDQIARMKANIRDLEANLSLAGVAILEGKTSDLRATVERMAKIQAATQEVILANTEIITDRLSKTPAKPAKIPKSTPIWKSWHVERFDVVERVFEPLTADGGPPLVGLVGDSGSGKTTAASEIVRSNE-------------------DRLPSLMLQLAHMVYEEIGG---RRPATSDDGTAYIKERMHRGHGGEGLKCLGVVDNVWEKEVVCELLEAGMWVLLSTRDEELVTGWEGEVVEVNELSEVEAESVLRKAAELPPETRLPDDAVDLIELCGRVAMDLAFGGRLSTVRGRSDRTAWSKAASKVRTEM 395          
BLAST of mRNA_S-firma_M_contig9490.20477.1 vs. uniprot
Match: A0A6H5J759_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J759_9PHAE)

HSP 1 Score: 365 bits (936), Expect = 9.800e-118
Identity = 212/373 (56.84%), Postives = 249/373 (66.76%), Query Frame = 1
Query:  148 IRDKVETVRSNRDGLNALEERCTYVTACVVVKCRQ-NSRSEMDVTPLEDSVKAVWKLVERCSRRGKVSRVL-KASSDKDEIAGLDARVDRLTGDLGLAGIAILEGKADNMKVLLVKILMSNIPKPPTKRANVPTATPALKSWHVERRHVMKTVLEALAGDGGPRLVGLVGDSGSGKTTAVSEIVRSIEARAAFHDGIVWLNVNEGAIQRLPSLMLQLARMVYEDVGGCVGRRPTELSDGA-TYIKECMQRGHGGKGLKSLVVADNVWETEVVSKLLETGMWVLLSTRNAELVACEHGEAVGVDELSEADAKSVLRKAAELAPGVSLPDDAVHLVELCGRVAMDLAFVARWSTVRGRQDGKAWSDAAENIRAEM 1257
            +R+ VETV   RD L ALE+RCTY+TAC++ K R  +  S  +V+PLED V    K VER  +R     V  +A++ K+ +A  +  +DRL                               PKPP K+A VP  TP  KSWHVER HV +TV+EAL G+ GPRLVGLVGDSG+GKTTA +E+VRS   R +F DGIVWL VN GA +RLPSLMLQLARMV ED+GG VG  P E    A  YIK+ M+ GHGGKGLK L VADNVWE EVVS LL+TGM VLLSTR+ ELV    G  V +DELS  DA+SVLR AAEL P V LPDDAV L++LCGRVAMDLAFV RWSTVRGR D  AWSDAA  +RAE+
Sbjct:    1 MRETVETVYQTRDELAALEKRCTYMTACIIAKFRHAHPGSAPNVSPLEDCVMEAEKFVERRKKRTMEQMVQNQAAARKELLANQEIIIDRL-------------------------------PKPPIKKAYVPQGTPTRKSWHVER-HVTETVVEALTGEAGPRLVGLVGDSGAGKTTAAAELVRSNVVRESFSDGIVWLTVNYGANKRLPSLMLQLARMVQEDIGGRVGGHPNESGGNADAYIKQRMENGHGGKGLKCLAVADNVWEKEVVSMLLKTGMTVLLSTRHEELVTGARGVPVRLDELSARDAESVLRSAAELPPAVRLPDDAVDLIDLCGRVAMDLAFVGRWSTVRGRHDRVAWSDAAAKVRAEI 341          
BLAST of mRNA_S-firma_M_contig9490.20477.1 vs. uniprot
Match: D8LFN6_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFN6_ECTSI)

HSP 1 Score: 344 bits (882), Expect = 2.430e-106
Identity = 203/437 (46.45%), Postives = 268/437 (61.33%), Query Frame = 1
Query:   16 SDAGTQAANLALTIGSNAADALSFAAELGEELPFISAVLKTLKAIRDKVETVRSNRDGLNALEERCTYVTACVVVKCRQNSRSEMDVTPLEDSVKAVWKLVERCSRRGKVSRVLKASSDKDEIAGLDARVDRLTGDLGLAGIAILEGKADNMKVLLVKILMSNIPKPPTKRANVPTATPALKSWHVERRHVMKTVLEALAGDGGPRLVGLVGDSGSGKTTAVSEIV------------------RSIEARAAFHDGIVWLNVNEG--AIQRLPSLMLQLARMVYEDVGGCVGRRP--TELSDGATYIKECMQ-RGHGGKGLKSLVVADNVWETEVVSKLLETGMWVLLSTRNAELVACEHGEAVGVDELSEADAKSVLRKAAELAPGVSLPDDAVHLVELCGRVAMDLAFVARWSTVRGRQDGKAWSDAAENIRAEM 1257
            S A  +AA + L +GS AAD + F  ELG E+P + AVLKTLKAIR + E V+SN + L ALEERCTYVTACV+VK RQ S SEM+V PLE  V A    + RCSRRG   R  KASSD DE+  L++RVD LTGDLGLAGIA L+ K D++K +L +++  N        A VP   P   SWHV R  V+  V E L+    P++VGLVG SGSGKTT  + IV                  R    R  F DG+VWL V  G  + +R+P+LM QLA+ V+ED+    G  P  +    G+ +I + ++ +G      + LVVAD+VWE +++ +L  TGMWVL ++R+ +LV    G  V VD+LS+A+A+ +LR AAEL+ G SLP  A  ++E C R+A  L FV RWSTV+G  D + W++A   I AEM
Sbjct:   49 SGAPEEAARVFLKMGSTAADIVMFTEELGGEVPVVGAVLKTLKAIRLRFEAVQSNTERLKALEERCTYVTACVIVKWRQTSSSEMNVAPLESCVNAAEDFIARCSRRGLCGRCTKASSDNDELLTLNSRVDSLTGDLGLAGIASLDAKVDDLKAMLAEVIAQNTMPASVPVAAVPNGKPVEHSWHVARDRVVDAVYEHLSCGQTPQVVGLVGRSGSGKTTCAASIVGESTGRRHQNETGDQMLRRLNRVREHFRDGVVWLRVGRGGGSAERVPALMSQLAKTVFEDLKHSYGFAPGASPTGGGSAFISDFVRGKGSAAGRKRCLVVADDVWEVDILEELRHTGMWVLFTSRDPDLVERVEGSVVPVDQLSKAEAECLLRGAAELSTGSSLPSAAAQVIERCDRMANRLEFVGRWSTVKGSDDEEDWAEAVSAIDAEM 485          
BLAST of mRNA_S-firma_M_contig9490.20477.1 vs. uniprot
Match: A0A6H5KYW3_9PHAE (NB-ARC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KYW3_9PHAE)

HSP 1 Score: 340 bits (872), Expect = 8.980e-105
Identity = 178/254 (70.08%), Postives = 195/254 (76.77%), Query Frame = 1
Query:  496 MSNIPKPPTKRANVPTATPALKSWHVERRHVMKTVLEALAGDGGPRLVGLVGDSGSGKTTAVSEIVRSIEARAAFHDGIVWLNVNEGAIQRLPSLMLQLARMVYEDVGGCVGRRPTELSDGATYIKECMQRGHGGKGLKSLVVADNVWETEVVSKLLETGMWVLLSTRNAELVACEHGEAVGVDELSEADAKSVLRKAAELAPGVSLPDDAVHLVELCGRVAMDLAFVARWSTVRGRQDGKAWSDAAENIRAEM 1257
            M  + K   K   VP  TPA KSW+V+RRHVM TV E LA DGGPRLVGLVG SGSGKTT  SE VRS E + AF DGI WL+VN+GA +RL SLMLQLAR+VYED+G  VGRRPT   D A YI++ M++G GGK LK LVVADNVWE EVVSKLLETGMWVLLSTRN  LV   HGE VGVDELSEADA SVLR+AAEL P   +P DAV L+ELCGRVAMDLAFV RWSTVRGRQD  AWSDA   +R EM
Sbjct:   23 MDQLSKTQAKLTKVPKGTPARKSWYVKRRHVMDTVFEGLASDGGPRLVGLVGGSGSGKTTVASESVRSTEVQEAFSDGIAWLSVNDGAKERLSSLMLQLARVVYEDIGCSVGRRPTSSDDCAAYIRQRMKKGTGGKKLKCLVVADNVWEKEVVSKLLETGMWVLLSTRNITLVTEAHGEVVGVDELSEADAMSVLRRAAELPPQGKIPGDAVDLIELCGRVAMDLAFVGRWSTVRGRQDRMAWSDAVSKVREEM 276          
BLAST of mRNA_S-firma_M_contig9490.20477.1 vs. uniprot
Match: D7G5K4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5K4_ECTSI)

HSP 1 Score: 305 bits (781), Expect = 2.740e-98
Identity = 175/316 (55.38%), Postives = 218/316 (68.99%), Query Frame = 1
Query:    1 MASGFSDAGTQAANLALTIGSNAADALSFAAEL-GEELPFISAVLKTLKAIRDKVETVRSNRDGLNALEERCTYVTACVVVKCRQNSR--SEMDVTPLEDSVKAVWKLVERCSRRGKVSRVLKASSDKDEIAGLDARVDRLTGDLGLAGIAILEGKADNMKVLLVK------------------ILMSNIPKPPTKRANVPTATPALKSWHVERRHVMKTVLEALAGDGGPRLVGLVGDSGSGKTTAVSEIVRSIEARAAFHDGIVWLNVNEGAIQRLPSLMLQLARMVYEDVGGCVGRRPTELSDGA-TYIKECM 882
            M +  SDA  +AANLAL +GS A D +SF     G ELP +  VLKTL A+R+ VETV+ NRD L ALE+RCTY+TA V+VK RQ  +  S +DVTPL+D V    K  ERC +R     ++KA S KDE+A L+AR+DRL GDLGLAGIA + G+  ++K ++++                  I++  +PKPPTK+A++P  TP  KSWHVERRHVM TV+EAL G+ GP LVGLVGDSG+GKTTA SE+V S   R +F DGIVWL VN GA +RLPSLMLQLARMV+ED+GGCVG RP E  D A  YIK+ M
Sbjct:    1 MVTTLSDAAVEAANLALKMGSTAVDMISFVHRGDGGELPVVGTVLKTLTAMRETVETVQQNRDELAALEKRCTYMTASVIVKFRQIPQPGSGLDVTPLKDCVVVAEKFAERCKKRRMRWEIVKAFSVKDELATLNARIDRLVGDLGLAGIATVLGEVADLKGMMLEQMVSDQAAAQKELLANQEIVIDRLPKPPTKKADIPQGTPMRKSWHVERRHVMDTVVEALTGEAGPHLVGLVGDSGAGKTTAASELVGSNVVRESFSDGIVWLAVNYGANKRLPSLMLQLARMVHEDIGGCVGGRPNESGDNADAYIKQRM 316          
BLAST of mRNA_S-firma_M_contig9490.20477.1 vs. uniprot
Match: D7G330_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G330_ECTSI)

HSP 1 Score: 230 bits (586), Expect = 1.620e-67
Identity = 153/415 (36.87%), Postives = 226/415 (54.46%), Query Frame = 1
Query:   94 ELGEELPFISAVLKTLKAIRDKVETVRSNRDGLNALEERCTYVTACVVVKCRQNSRSEMDVTPLEDSVKAVWKLVERCSRRGKVSRVLKASSDKDEIAGLDARVDRLTGDLGLAGIAILEGKADNMKVLLVKILMSNIPKPPTKRANVPTATPALKSWHVERRHVMKTVLEALAGDGGPRLVGLVGDSGSGKTTAVSEIV--------------------RSIEARAAFHDGIVWLNVNEGA--IQRLPSLMLQLARMVYEDVGGCVGRRPTELSDGATYIKECMQRGHGGKGLKSLVVADNVWETEVVSKLLETGMWVLLSTRNAELVACEHGEAVGVDELSEADAKSVLRKAAELAPGVSLPDDAVHLVELCGRVAMDLAFVARWSTVR-----GRQDGKAWSDAAENIRAEM 1257
            ++GE++PF+  +   +   +D V+    N+  L  L ERC  +T  VV K +  +   ++V+PLED VK + ++ ER  ++   +R+     D ++I  L+ R+     DL  AG+  +    + M+  + +IL    P+P  K A VP   P  +SWH  R  V+  V + L GDGGP +  L G SG+GKTTA + +V                    R    RA F DG+VWL V +GA    RLP LM +LA+ ++E+V       P    DG +Y+K+ +++    + LK  VVAD+VWE  VV KL ETGMW+LL+ RN  +V  E  E V VD L + +A++VLR AA L PG SL D A+ ++E+CG VAMD+AFV  WS+VR       +  +AW+     I A+M
Sbjct:   25 KIGEDIPFVGGLCTAVLNAKDMVDKASDNQAKLEKLCERCCGITVQVVEKLKGPTPLMVNVSPLEDCVKELEEVAERYGKKSCCTRLTHFQKDDEDIRDLEKRISTAIDDLTAAGVVEV---GNLMQQQVGEILARLQPRP--KLAPVPPGVPMGQSWHTMRDGVVDRVYDILGGDGGPAVAALGGRSGAGKTTAAAAMVGERQGPIHPLARENEEQAGTRLDRLRARFSDGVVWLRVGKGAGVADRLPLLMRKLAKALHEEVLKSYVDGPGIGEDGESYVKKIVEQ----ESLKCRVVADDVWEPPVVEKLRETGMWILLTARNPSMV--EPNERVFVDRLEKMEAQNVLRGAARLPPGQSLCDVAMKVLEVCGYVAMDIAFVGSWSSVRTVDNCAPKSSRAWAGVVAEITAQM 428          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig9490.20477.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FZW8_ECTSI5.150e-16163.66NB-ARC and TPR repeat-containing protein n=1 Tax=E... [more]
D7FZY7_ECTSI3.420e-15860.05NB-ARC and TPR repeat-containing protein n=1 Tax=E... [more]
A0A6H5KRK8_9PHAE3.850e-15759.68NB-ARC domain-containing protein n=2 Tax=Ectocarpu... [more]
A0A6H5KLK9_9PHAE4.740e-15059.09NB-ARC domain-containing protein n=2 Tax=Ectocarpu... [more]
A0A6H5KJ30_9PHAE8.290e-12352.06Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5J759_9PHAE9.800e-11856.84NB-ARC domain-containing protein n=1 Tax=Ectocarpu... [more]
D8LFN6_ECTSI2.430e-10646.45NB-ARC and TPR repeat-containing protein n=1 Tax=E... [more]
A0A6H5KYW3_9PHAE8.980e-10570.08NB-ARC domain-containing protein n=2 Tax=Ectocarpu... [more]
D7G5K4_ECTSI2.740e-9855.38Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G330_ECTSI1.620e-6736.87Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig9490contigS-firma_M_contig9490:2478..4017 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-19
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score500.7
Seed ortholog evalue6.4e-139
Seed eggNOG ortholog2880.D7FZX2
KEGG koko:K10407
KEGG Pathwayko05132,map05132
EggNOG free text desc.determination of stomach left/right asymmetry
EggNOG OGsCOG0457@1,KOG1840@2759
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03019,ko04812
Hectar predicted targeting categoryother localisation
Exons2
Model size1257
Cds size1257
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622828782.8986154-CDS-S-firma_M_contig9490:2477..29641622828782.8986154-CDS-S-firma_M_contig9490:2477..2964Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig9490 2478..2964 +
1697105159.7830176-CDS-S-firma_M_contig9490:2477..29641697105159.7830176-CDS-S-firma_M_contig9490:2477..2964Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig9490 2478..2964 +
1622828782.9128304-CDS-S-firma_M_contig9490:3247..40171622828782.9128304-CDS-S-firma_M_contig9490:3247..4017Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig9490 3248..4017 +
1697105159.7992887-CDS-S-firma_M_contig9490:3247..40171697105159.7992887-CDS-S-firma_M_contig9490:3247..4017Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig9490 3248..4017 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig9490.20477.1prot_S-firma_M_contig9490.20477.1Sphaerotrichia firma Sfir_13m malepolypeptideS-firma_M_contig9490 2478..4017 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-firma_M_contig9490.20477.1

>prot_S-firma_M_contig9490.20477.1 ID=prot_S-firma_M_contig9490.20477.1|Name=mRNA_S-firma_M_contig9490.20477.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=419bp
MASGFSDAGTQAANLALTIGSNAADALSFAAELGEELPFISAVLKTLKAI
RDKVETVRSNRDGLNALEERCTYVTACVVVKCRQNSRSEMDVTPLEDSVK
AVWKLVERCSRRGKVSRVLKASSDKDEIAGLDARVDRLTGDLGLAGIAIL
EGKADNMKVLLVKILMSNIPKPPTKRANVPTATPALKSWHVERRHVMKTV
LEALAGDGGPRLVGLVGDSGSGKTTAVSEIVRSIEARAAFHDGIVWLNVN
EGAIQRLPSLMLQLARMVYEDVGGCVGRRPTELSDGATYIKECMQRGHGG
KGLKSLVVADNVWETEVVSKLLETGMWVLLSTRNAELVACEHGEAVGVDE
LSEADAKSVLRKAAELAPGVSLPDDAVHLVELCGRVAMDLAFVARWSTVR
GRQDGKAWSDAAENIRAEM
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mRNA from alignment at S-firma_M_contig9490:2478..4017+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-firma_M_contig9490.20477.1 ID=mRNA_S-firma_M_contig9490.20477.1|Name=mRNA_S-firma_M_contig9490.20477.1|organism=Sphaerotrichia firma Sfir_13m male|type=mRNA|length=1540bp|location=Sequence derived from alignment at S-firma_M_contig9490:2478..4017+ (Sphaerotrichia firma Sfir_13m male)
ATGGCTAGCGGCTTCAGCGATGCCGGAACGCAGGCTGCGAACCTCGCGCT GACGATAGGCTCGAATGCAGCGGACGCTCTCTCGTTCGCGGCGGAGTTGG GGGAGGAGCTGCCGTTTATCAGCGCTGTCTTGAAGACGCTCAAGGCCATT CGCGATAAGGTGGAGACCGTGAGAAGCAACAGGGACGGGCTGAACGCGCT GGAAGAGAGGTGTACGTACGTGACCGCGTGCGTCGTCGTAAAGTGTAGGC AGAACTCTAGATCGGAGATGGATGTGACTCCGCTCGAGGATTCCGTCAAG GCCGTGTGGAAGTTGGTCGAGCGCTGCAGCAGGCGAGGCAAGGTGTCGAG GGTGCTGAAAGCCTCCAGCGACAAAGACGAGATTGCTGGATTGGACGCCC GTGTCGACCGCCTGACGGGCGACTTGGGCCTGGCGGGCATTGCCATCCTG GAGGGGAAGGCCGACAACATGAAAGTACTGCTGGTGAGTTTTTACGACGC CGGTGCCGTGTTCTCCCCTGCGCTCACCCTGCTCTCGACATCACACCGCA CGTGGGCTCGACTAGCTGTGCCTTGCGTCCGCACCTGATCATGCCCGTGC CGCAAACGGTCAAGTTTTCCAACCTCTAGCACCCGCCTGCTTTGGTGGAG GAAGGCGACTTCCGAAGATATAGCAGTAGAAACGCATGGGGTTCCGGTAC GGCTCTACGTCTAACGTGCTATTTGTTGCCATTATTTTGCGTTTCCAGGA GCGCATAAGCACGAACCAAGAGATTTTGATGAGCAACATACCGAAGCCGC CGACCAAGCGGGCCAATGTTCCCACTGCCACACCGGCGCTCAAAAGCTGG CACGTCGAGCGTCGCCATGTGATGAAAACAGTGCTAGAGGCGCTAGCAGG CGATGGAGGCCCGCGATTGGTGGGACTTGTGGGCGACAGCGGATCGGGCA AGACTACGGCTGTATCCGAGATCGTCAGAAGCATCGAGGCTCGCGCGGCT TTCCACGATGGCATCGTGTGGCTGAACGTCAACGAGGGAGCGATTCAGCG CCTCCCGTCCTTGATGCTGCAGCTGGCCCGCATGGTGTACGAGGACGTCG GGGGCTGTGTGGGCCGTCGTCCGACGGAATTGAGCGACGGTGCCACCTAC ATCAAAGAGTGTATGCAGAGGGGTCACGGGGGCAAGGGATTGAAGAGTCT TGTGGTGGCGGACAACGTGTGGGAGACGGAGGTAGTGTCGAAGCTGCTGG AGACGGGGATGTGGGTGCTCCTGTCGACCCGCAATGCGGAGCTCGTGGCG TGTGAACACGGTGAGGCGGTGGGCGTCGACGAGCTGTCCGAGGCAGACGC GAAGTCGGTGCTGAGAAAAGCAGCCGAGCTAGCCCCCGGGGTGAGTTTGC CCGACGATGCTGTACACCTGGTCGAGTTGTGCGGCCGCGTGGCGATGGAC CTGGCGTTTGTGGCGCGGTGGAGCACGGTCCGCGGTCGGCAAGATGGGAA AGCTTGGTCGGATGCGGCGGAGAACATCCGTGCTGAGATG
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Coding sequence (CDS) from alignment at S-firma_M_contig9490:2478..4017+

>mRNA_S-firma_M_contig9490.20477.1 ID=mRNA_S-firma_M_contig9490.20477.1|Name=mRNA_S-firma_M_contig9490.20477.1|organism=Sphaerotrichia firma Sfir_13m male|type=CDS|length=2514bp|location=Sequence derived from alignment at S-firma_M_contig9490:2478..4017+ (Sphaerotrichia firma Sfir_13m male)
ATGGCTAGCGGCTTCAGCGATGCCGGAACGCAGGCTGCGAACCTCGCGCT
GACGATAGGCTCGAATGCAGCGGACGCTCTCTCGTTCGCGGCGGAGTTGG
GGGAGGAGCTGCCGTTTATCAGCGCTGTCTTGAAGACGCTCAAGGCCATT
CGCGATAAGGTGGAGACCGTGAGAAGCAACAGGGACGGGCTGAACGCGCT
GGAAGAGAGGTGTACGTACGTGACCGCGTGCGTCGTCGTAAAGTGTAGGC
AGAACTCTAGATCGGAGATGGATGTGACTCCGCTCGAGGATTCCGTCAAG
GCCGTGTGGAAGTTGGTCGAGCGCTGCAGCAGGCGAGGCAAGGTGTCGAG
GGTGCTGAAAGCCTCCAGCGACAAAGACGAGATTGCTGGATTGGACGCCC
GTGTCGACCGCCTGACGGGCGACTTGGGCCTGGCGGGCATTGCCATCCTG
GAGGGGAAGGCCGACAACATGAAAGTACTGCTGGTGAATGGCTAGCGGCT
TCAGCGATGCCGGAACGCAGGCTGCGAACCTCGCGCTGACGATAGGCTCG
AATGCAGCGGACGCTCTCTCGTTCGCGGCGGAGTTGGGGGAGGAGCTGCC
GTTTATCAGCGCTGTCTTGAAGACGCTCAAGGCCATTCGCGATAAGGTGG
AGACCGTGAGAAGCAACAGGGACGGGCTGAACGCGCTGGAAGAGAGGTGT
ACGTACGTGACCGCGTGCGTCGTCGTAAAGTGTAGGCAGAACTCTAGATC
GGAGATGGATGTGACTCCGCTCGAGGATTCCGTCAAGGCCGTGTGGAAGT
TGGTCGAGCGCTGCAGCAGGCGAGGCAAGGTGTCGAGGGTGCTGAAAGCC
TCCAGCGACAAAGACGAGATTGCTGGATTGGACGCCCGTGTCGACCGCCT
GACGGGCGACTTGGGCCTGGCGGGCATTGCCATCCTGGAGGGGAAGGCCG
ACAACATGAAAGTACTGCTGGTGAAGATTTTGATGAGCAACATACCGAAG
CCGCCGACCAAGCGGGCCAATGTTCCCACTGCCACACCGGCGCTCAAAAG
CTGGCACGTCGAGCGTCGCCATGTGATGAAAACAGTGCTAGAGGCGCTAG
CAGGCGATGGAGGCCCGCGATTGGTGGGACTTGTGGGCGACAGCGGATCG
GGCAAGACTACGGCTGTATCCGAGATCGTCAGAAGCATCGAGGCTCGCGC
GGCTTTCCACGATGGCATCGTGTGGCTGAACGTCAACGAGGGAGCGATTC
AGCGCCTCCCGTCCTTGATGCTGCAGCTGGCCCGCATGGTGTACGAGGAC
GTCGGGGGCTGTGTGGGCCGTCGTCCGACGGAATTGAGCGACGGTGCCAC
CTACATCAAAGAGTGTATGCAGAGGGGTCACGGGGGCAAGGGATTGAAGA
GTCTTGTGGTGGCGGACAACGTGTGGGAGACGGAGGTAGTGTCGAAGCTG
CTGGAGACGGGGATGTGGGTGCTCCTGTCGACCCGCAATGCGGAGCTCGT
GGCGTGTGAACACGGTGAGGCGGTGGGCGTCGACGAGCTGTCCGAGGCAG
ACGCGAAGTCGGTGCTGAGAAAAGCAGCCGAGCTAGCCCCCGGGGTGAGT
TTGCCCGACGATGCTGTACACCTGGTCGAGTTGTGCGGCCGCGTGGCGAT
GGACCTGGCGTTTGTGGCGCGGTGGAGCACGGTCCGCGGTCGGCAAGATG
GGAAAGCTTGGTCGGATGCGGCGGAGAACATCCGTGCTGAGATGAGATTT
TGATGAGCAACATACCGAAGCCGCCGACCAAGCGGGCCAATGTTCCCACT
GCCACACCGGCGCTCAAAAGCTGGCACGTCGAGCGTCGCCATGTGATGAA
AACAGTGCTAGAGGCGCTAGCAGGCGATGGAGGCCCGCGATTGGTGGGAC
TTGTGGGCGACAGCGGATCGGGCAAGACTACGGCTGTATCCGAGATCGTC
AGAAGCATCGAGGCTCGCGCGGCTTTCCACGATGGCATCGTGTGGCTGAA
CGTCAACGAGGGAGCGATTCAGCGCCTCCCGTCCTTGATGCTGCAGCTGG
CCCGCATGGTGTACGAGGACGTCGGGGGCTGTGTGGGCCGTCGTCCGACG
GAATTGAGCGACGGTGCCACCTACATCAAAGAGTGTATGCAGAGGGGTCA
CGGGGGCAAGGGATTGAAGAGTCTTGTGGTGGCGGACAACGTGTGGGAGA
CGGAGGTAGTGTCGAAGCTGCTGGAGACGGGGATGTGGGTGCTCCTGTCG
ACCCGCAATGCGGAGCTCGTGGCGTGTGAACACGGTGAGGCGGTGGGCGT
CGACGAGCTGTCCGAGGCAGACGCGAAGTCGGTGCTGAGAAAAGCAGCCG
AGCTAGCCCCCGGGGTGAGTTTGCCCGACGATGCTGTACACCTGGTCGAG
TTGTGCGGCCGCGTGGCGATGGACCTGGCGTTTGTGGCGCGGTGGAGCAC
GGTCCGCGGTCGGCAAGATGGGAAAGCTTGGTCGGATGCGGCGGAGAACA
TCCGTGCTGAGATG
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