mRNA_S-firma_M_contig9484.20467.1 (mRNA) Sphaerotrichia firma Sfir_13m male
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Overview
Homology
BLAST of mRNA_S-firma_M_contig9484.20467.1 vs. uniprot
Match: D8LJY0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJY0_ECTSI) HSP 1 Score: 351 bits (900), Expect = 9.190e-109 Identity = 172/188 (91.49%), Postives = 180/188 (95.74%), Query Frame = 1
Query: 13 GGGLMEDNMRGLFDLPEDGLVSSLALTPDGCYVFAAFGGGEVRLYAQALRSVGAASRNGTIVAQIKSKGMFSNTRVECHVEASEDGRFVFAGLLRGSSEMLALDIADLPRWGTLPVGEEASLDASRVDLNRRIRTYSHSDGKLKGFGAAAVVRTGPDRSEWGKKYRLFCGRGIKNIHVWSFVPDLEGG 576
GG +MED+MRGLFDLPEDGLVSSLALTPDGCYVFAAFGGGEVRLYAQALR+VGAASR+GTIVAQIKSKGMFSNTRVECHVEASEDGRF+FAGLLRGSSEMLALDI+DLPRW TLP GEEASL+ASRVDLNR IRTYSHSDGKLKGFGAAAVVRTGP R EWGK+YRLFCGRGIKNIHVWSFVPDL G
Sbjct: 16 GGSMMEDSMRGLFDLPEDGLVSSLALTPDGCYVFAAFGGGEVRLYAQALRTVGAASRSGTIVAQIKSKGMFSNTRVECHVEASEDGRFIFAGLLRGSSEMLALDISDLPRWRTLPAGEEASLNASRVDLNRLIRTYSHSDGKLKGFGAAAVVRTGPARREWGKRYRLFCGRGIKNIHVWSFVPDLASG 203
BLAST of mRNA_S-firma_M_contig9484.20467.1 vs. uniprot
Match: A0A6H5LF69_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LF69_9PHAE) HSP 1 Score: 350 bits (897), Expect = 5.800e-108 Identity = 171/190 (90.00%), Postives = 182/190 (95.79%), Query Frame = 1
Query: 13 GGGLMEDNMRGLFDLPEDGLVSSLALTPDGCYVFAAFGGGEVRLYAQALRSVGAASRNGTIVAQIKSKGMFSNTRVECHVEASEDGRFVFAGLLRGSSEMLALDIADLPRWGTLPVGEEASLDASRVDLNRRIRTYSHSDGKLKGFGAAAVVRTGPDRSEWGKKYRLFCGRGIKNIHVWSFVPDLEGGKG 582
GG +MED+MRGLFDLPEDGLVSSLALTPDGCYVFAAFGGGEVRLYAQALR+VGAASR+GTIVAQIKSKGMFSNTRV+CHVEASEDGRF+FAGLLRGSSE+LALDI+DLPRW TLP GEEASL+ASRVDLNR IRTYSHSDGKLKGFGAAAVVRTGP+R EWGK+YRLFCGRGIKNIHVWSFVPDL G G
Sbjct: 151 GGPMMEDSMRGLFDLPEDGLVSSLALTPDGCYVFAAFGGGEVRLYAQALRTVGAASRSGTIVAQIKSKGMFSNTRVDCHVEASEDGRFIFAGLLRGSSEVLALDISDLPRWRTLPAGEEASLNASRVDLNRLIRTYSHSDGKLKGFGAAAVVRTGPNRREWGKRYRLFCGRGIKNIHVWSFVPDLASGGG 340
BLAST of mRNA_S-firma_M_contig9484.20467.1 vs. uniprot
Match: A0A835YLG3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLG3_9STRA) HSP 1 Score: 127 bits (319), Expect = 2.480e-30 Identity = 79/174 (45.40%), Postives = 94/174 (54.02%), Query Frame = 1
Query: 73 VSSLALTPDGCYVFAAFGGGEVRLYAQALRSVGAASRNGTIVAQIKSKGMFSNTRVECHVEASEDGRFVFAGLLRGSSEMLALDIADLPRWGTLPVGEEASLDASRVDLNRRIRTYSHSDGKLKGFGAAAVVRTGPDRSEW----GKKYRLFCGRGIKNIHVWSFVPDLEGGKG 582
V+SLA+TP+GCYVFA F G + L + HV SED RFVFAG+LRGS+EMLA D+A LP W T AS D +R L+ + +SHSD KLKGFGAAA++ S G +YRL CGRGIKNIHVWSF P G G
Sbjct: 3 VTSLAVTPNGCYVFAGFVDGTLCL-------------------------------LNMHVAVSEDCRFVFAGVLRGSTEMLAADLAALPTWETCQ-SLRASSDHARA-LSEAVTLHSHSDAKLKGFGAAALLGGADGASSGSGGGGAEYRLLCGRGIKNIHVWSFKPAPPGSSG 143
BLAST of mRNA_S-firma_M_contig9484.20467.1 vs. uniprot
Match: W7TGH0_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TGH0_9STRA) HSP 1 Score: 115 bits (288), Expect = 3.500e-26 Identity = 74/180 (41.11%), Postives = 100/180 (55.56%), Query Frame = 1
Query: 67 GLVSSLALTPDGCYVFAAFGGGEVRLYAQALRSVGAASRNGTIVAQIKSKGMFSNTRVECHVEASEDGRFVFAGLLRGSSEMLALDIADLPRW----GTLPVGEE-ASLDASRVDLNRRIRTYSHSDGKLKGFGAAAVVRTGPDRSEWG------------KKYRLFCGRGIKNIHVWSF 555
G V+S+ LTPDG YV A G +RLY+ S G+ G ++ QI +KG+ +N + HVE ++DGRF FAG+LRGS EM A D+ LPR G GEE ++ S+ I +++ D KL+GFGA V R P R+ G +YRL CG GIKN+H+W F
Sbjct: 68 GRVTSVDLTPDGAYVIAGCSDGTLRLYSMLHPSWGS---EGLLLGQIHAKGLITN--LIFHVEVADDGRFAFAGVLRGSVEMFAYDLTRLPRGHFGEGLDAGGEENEDVNLSKAAAELLIECHTNLDAKLRGFGA--VTRVAPTRAASGLGAWEMESEAEPPEYRLICGLGIKNLHIWRF 240
BLAST of mRNA_S-firma_M_contig9484.20467.1 vs. uniprot
Match: A0A7S1FY45_9STRA (Hypothetical protein (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FY45_9STRA) HSP 1 Score: 107 bits (266), Expect = 2.920e-23 Identity = 60/140 (42.86%), Postives = 84/140 (60.00%), Query Frame = 1
Query: 163 SVGAASRNGTIVAQIKSKGMFSNTRVECHVEASEDGRFVFAGLLRGSSEMLALDIADLPRWGTLPVGEEASLDASRVDLNRR--IRTYSHSDGKLKGFGAAAVVRT-GPDRSEWGKKYRLFCGRGIKNIHVWSFVPDLEG 573
+V A G I+AQI+++G+ +T + V SED RFVFAG+ RGSSE+LA D+++L R P G + + + R + YSHSD K+KGFGA +R+ D S Y L CG+GIKNIH+W+F P +G
Sbjct: 224 AVQACPHGGAILAQIRARGL--HTHLLMDVAVSEDSRFVFAGVTRGSSEILAADLSNLLR-AVQPDGTSSDMPFRSMSKTARELVHVYSHSDSKIKGFGACTRLRSYSIDDSADNAVYMLLCGKGIKNIHIWTFQPSCDG 360
BLAST of mRNA_S-firma_M_contig9484.20467.1 vs. uniprot
Match: A0A1V9ZN20_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZN20_9STRA) HSP 1 Score: 96.7 bits (239), Expect = 1.220e-19 Identity = 67/180 (37.22%), Postives = 93/180 (51.67%), Query Frame = 1
Query: 73 VSSLALTPDGCYVFAAFGGGEVRLY----------------AQALRSVGAASRNGTIVAQIKSKGMFSNTRVECHVEASEDGRFVFAGLLRGSSEMLALDIADLPRWGTLPVGEEASLDASRVDLNRRIRTYSHSDGKLKGFGAAAVVRTGPDRSEWGKKYRLFCGRGIKNIHVWSFVPD 564
VSS+A+ G +V A F G +RLY L S R G ++ I ++GM++ RV HV EDGRF+FAG+ RGS+E+L +DIA + LP E + + V T+S++D KL+GFGA VR P S +Y + CG GIKN+H+W F D
Sbjct: 104 VSSVAVDRAGRFVVAGFNNGTIRLYPLVDNFKRSIDVGTIEVNNLDSNSLVFRKGVVLEHITARGMYTTLRV--HVVIPEDGRFIFAGVYRGSTEILVIDIASI----VLP-SETIGVPTAEVV------THSYNDAKLRGFGA---VRAVPGDSLITTEYLVLCGLGIKNLHLWRFYWD 267
BLAST of mRNA_S-firma_M_contig9484.20467.1 vs. uniprot
Match: W4H9G5_9STRA (Uncharacterized protein n=11 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H9G5_9STRA) HSP 1 Score: 95.1 bits (235), Expect = 4.170e-19 Identity = 64/183 (34.97%), Postives = 95/183 (51.91%), Query Frame = 1
Query: 73 VSSLALTPDGCYVFAAFGGGEVRLY-----------AQALRSVGAAS--------RNGTIVAQIKSKGMFSNTRVECHVEASEDGRFVFAGLLRGSSEMLALDIADLPRWGTLPVGEEASLDASRVDLNRRIRTYSHSDGKLKGFGAAAVVRTGPDRSEWGKKYRLFCGRGIKNIHVWSFVPD 564
VSS+A+ G +V A F G +RLY +L + AS R G ++ I ++GM++ RV +V +DGRF+FAG+ RGS+E+L +DI D R T VG + + T+S+SD KL+GFGA + + S +Y++ CG GIKN+H+W F D
Sbjct: 99 VSSVAVDRAGRFVVAGFNNGTIRLYPLSGCSTAPVVVGSLETDATASIDENKLVFRKGVVLEHISARGMYTQLRV--NVVIPDDGRFIFAGVYRGSTEILVIDI-DSIRLPTDVVGVPTA----------EVNTHSYSDAKLRGFGAVRAMPSSQPSSLVTTEYQVLCGLGIKNLHLWRFYWD 268
BLAST of mRNA_S-firma_M_contig9484.20467.1 vs. uniprot
Match: A0A485KDY9_9STRA (Aste57867_5072 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KDY9_9STRA) HSP 1 Score: 95.1 bits (235), Expect = 4.180e-19 Identity = 66/184 (35.87%), Postives = 97/184 (52.72%), Query Frame = 1
Query: 73 VSSLALTPDGCYVFAAFGGGEVRLY------------AQALRSVGAAS--------RNGTIVAQIKSKGMFSNTRVECHVEASEDGRFVFAGLLRGSSEMLALDIADLPRWGTLPVGEEASLDASRVDLNRRIRTYSHSDGKLKGFGAAAVVRTGPDRSEWGKKYRLFCGRGIKNIHVWSFVPD 564
VSS+A+ G +V A F G +RLY +L + AS R G ++ I ++GM++ RV +V +DGRF+FAG+ RGS+E+L +DI D R T +G + + T+S+SD KL+GFGA VR P +S +Y++ CG GIKN+H+W F D
Sbjct: 100 VSSVAVDRAGRFVVAGFNNGTIRLYPLKNNAPSVPIVVGSLETDETASIDENKLVFRKGVVLEHISARGMYTQLRV--NVVIPDDGRFIFAGVYRGSTEILVIDI-DSIRLPTDIIGVPTA----------EVNTHSYSDAKLRGFGA---VRCMPGKSSITTEYQVLCGLGIKNLHLWRFYWD 267
BLAST of mRNA_S-firma_M_contig9484.20467.1 vs. uniprot
Match: T0QFY8_SAPDV (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0QFY8_SAPDV) HSP 1 Score: 94.7 bits (234), Expect = 5.620e-19 Identity = 67/180 (37.22%), Postives = 96/180 (53.33%), Query Frame = 1
Query: 73 VSSLALTPDGCYVFAAFGGGEVRLYAQA-------------LRSVGAAS---RNGTIVAQIKSKGMFSNTRVECHVEASEDGRFVFAGLLRGSSEMLALDIADLPRWGTLPVGEEASLDASRVDLNRRIRTYSHSDGKLKGFGAAAVVRTGPDRSEWGKKYRLFCGRGIKNIHVWSFVPD 564
VSS+A+ G +V A F G +RLY + SV A + R G ++ I ++GM++ RV HV EDGRF+FAG+ RGS+E+L +DI + LP E + + V T+S++D KL+GFGA VR P S +Y++ CG GIKN+H+W F D
Sbjct: 124 VSSVAVDRAGRFVVAGFNNGTIRLYPLVDNFKRAIDVGVVEVSSVDANALVFRKGVVLEHITARGMYTTLRV--HVVIPEDGRFIFAGVYRGSTEILVIDIDSI----VLPT-ETIGVPTAEVV------THSYNDAKLRGFGA---VRAVPGDSLITTEYQVLCGLGIKNLHLWRFYWD 287
BLAST of mRNA_S-firma_M_contig9484.20467.1 vs. uniprot
Match: A0A024UT26_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UT26_9STRA) HSP 1 Score: 93.6 bits (231), Expect = 1.420e-18 Identity = 63/182 (34.62%), Postives = 96/182 (52.75%), Query Frame = 1
Query: 73 VSSLALTPDGCYVFAAFGGGEVRLYAQ----------ALRSVGAAS--------RNGTIVAQIKSKGMFSNTRVECHVEASEDGRFVFAGLLRGSSEMLALDIADLPRWGTLPVGEEASLDASRVDLNRRIRTYSHSDGKLKGFGAAAVVRTGPDRSEWGKKYRLFCGRGIKNIHVWSFVPD 564
VSS+A+ G +V A F G +RLY +L + AS R G ++ I ++GM++ RV +V +DGRF+FAG+ RGS+E+L ++I + R T VG + + T+S+SD KL+GFGA + G + S +Y++ CG GIKN+H+W F D
Sbjct: 105 VSSVAIDRAGRFVVAGFNNGTIRLYPLRGSAAPVVIGSLETEDTASLDENKLVFRKGVVLEHISARGMYTQLRV--NVVIPDDGRFIFAGVYRGSTEILVIEIESI-RLPTDAVGVPTA----------EVNTHSYSDAKLRGFGAVRAM-PGSNSSTVTTEYQVLCGLGIKNLHLWRFYWD 272 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig9484.20467.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_M_contig9484.20467.1 >prot_S-firma_M_contig9484.20467.1 ID=prot_S-firma_M_contig9484.20467.1|Name=mRNA_S-firma_M_contig9484.20467.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=206bp MAVNGGGLMEDNMRGLFDLPEDGLVSSLALTPDGCYVFAAFGGGEVRLYAback to top mRNA from alignment at S-firma_M_contig9484:1692..4050+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_M_contig9484.20467.1 ID=mRNA_S-firma_M_contig9484.20467.1|Name=mRNA_S-firma_M_contig9484.20467.1|organism=Sphaerotrichia firma Sfir_13m male|type=mRNA|length=2359bp|location=Sequence derived from alignment at S-firma_M_contig9484:1692..4050+ (Sphaerotrichia firma Sfir_13m male)back to top Coding sequence (CDS) from alignment at S-firma_M_contig9484:1692..4050+ >mRNA_S-firma_M_contig9484.20467.1 ID=mRNA_S-firma_M_contig9484.20467.1|Name=mRNA_S-firma_M_contig9484.20467.1|organism=Sphaerotrichia firma Sfir_13m male|type=CDS|length=1236bp|location=Sequence derived from alignment at S-firma_M_contig9484:1692..4050+ (Sphaerotrichia firma Sfir_13m male)back to top |