mRNA_S-firma_M_contig947.20450.1 (mRNA) Sphaerotrichia firma Sfir_13m male
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Overview
Homology
BLAST of mRNA_S-firma_M_contig947.20450.1 vs. uniprot
Match: D8LCS2_ECTSI (Myb-like DNA-binding domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCS2_ECTSI) HSP 1 Score: 756 bits (1951), Expect = 3.490e-258 Identity = 560/888 (63.06%), Postives = 590/888 (66.44%), Query Frame = 3
Query: 210 ASSNGTFEPS-SLDKFMETLDALSPDGQQLHVDKRQS---NNSMTXXXXXXXXXPFGGSRAARRGSNGSSSSRGGSQSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVSSGLKTPRTGSHHGHFTRVRRNSPVKLDPSVSSPTTXXXXXXXXXXXXXXXXXXXXXPKRKRSYAQLATY--ENGAPSPFPSDGAPKSSSKGLSNSSLTVHKDGAYMQVTFDDTHRFANEEDTPMN-PLGESLMNDPFLATPEPMPMPIQERKDIDQALSLLQLSGGSGSQSDLTRSARRNSGPSTGGKM------TPGPAST-LFPPLNQQARRSRSREGQDAVENIVPGSSTGASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAWGAKHPASV---------------------------------------PRLLSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVPEKGAGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPAVQAPVSKPQGTKGGGPGSFCSKPEALSQLDTSQSDQMVLDADLWIVRERGDVCTSNECIYKDKSTGISSRRHYHATCDHRHKRGGPKGGMIFHHHQLEKIQKHQRAHIRTLHKKTPAEAVLSEGNVEPYLPNAWTEEEAGVLAHLVGLYGPTNWGIIAAGVATKSETQCMLHWRFALNGNATVKGTGTWQSVEDERMLSLVQIFGQRWSTVAEHMPGRLAKQCRERYLNNLDPELRRGTWSRE-----------------EDEKLLQLRGQQNKSFAKIAEQINGRSYNDVKNRWSQISRQIAALK 2663
ASS G FEP+ SLDKFME+L SPDGQ LH+DKRQS N+SMT PFGGS ARR SNGS + GG+ + + S+GLKTPR+ + HGHFTRVRRNSPVKLDPS SSP XXXXXXXXXXXXXX PKRKR+Y+QLAT+ ENGAPSPFPSDG PK++S+ LSNS LTVHKDGAYMQVTFDDTHRFA EED MN PLGESLMNDPFLATPEP RKDIDQALSLLQLSGGSGSQSDLTRSARR+SG TPGPA+ LFPPLN Q D VEN+VP SS+GA WGAK PA V XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX RPAVQAPVSKPQGTKGGGPGSFCSKPEALSQLDTSQSD MVLDADLWIVRERG+ C+SNECIYKDK+TGISSRRHYHATCDHRHK GGPKGGMIFHHHQLEKIQKHQRAHIRTLHKKTPAEAVL+EGNVEPYLP WTE+EA VLAHLVG+YGPTNWGII+AGVATK+ETQCMLHWRFALNGNATVKGTGTWQSVEDERMLSLVQIFGQRWSTVAEHMPGRLAKQCRERYLNNLDPELRRG WSRE EDEKLLQLRGQQNKSFAKIAEQI+GRSYNDVKNRWSQISRQIAALK
Sbjct: 12 ASSGGAFEPNYSLDKFMESLGTFSPDGQPLHLDKRQSLESNSSMT---------PFGGS-TARRSSNGSYA--GGATAPGSCARATPNLRLRRSSAGGDSSVSRMSIGSGNGASEDGRSNNHSGSSTAAVSSTTASLSN---------------------------ASSTGLKTPRSSARHGHFTRVRRNSPVKLDPS-SSPARAGXXXXXXXXXXXXXX-----PKRKRNYSQLATFGDENGAPSPFPSDGGPKNASRVLSNSRLTVHKDGAYMQVTFDDTHRFAMEEDPQMNQPLGESLMNDPFLATPEPT---TGSRKDIDQALSLLQLSGGSGSQSDLTRSARRSSGXXXXXXXXXXXXXTPGPANHGLFPPLNSQ----------DLVENVVPASSSGAGAASQAGAGPSFSSVTSPRSARG--------GWGAKSPAGVHGHMLHHPSCSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQKGKPKAKGHVGGQRPAVQAPVSKPQGTKGGGPGSFCSKPEALSQLDTSQSDLMVLDADLWIVRERGEHCSSNECIYKDKTTGISSRRHYHATCDHRHK-GGPKGGMIFHHHQLEKIQKHQRAHIRTLHKKTPAEAVLNEGNVEPYLPQEWTEQEASVLAHLVGMYGPTNWGIISAGVATKTETQCMLHWRFALNGNATVKGTGTWQSVEDERMLSLVQIFGQRWSTVAEHMPGRLAKQCRERYLNNLDPELRRGAWSREARNKKQRVLCAYVGKGLEDEKLLQLRGQQNKSFAKIAEQIDGRSYNDVKNRWSQISRQIAALK 832
BLAST of mRNA_S-firma_M_contig947.20450.1 vs. uniprot
Match: A0A6H5JLY2_9PHAE (MYB protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLY2_9PHAE) HSP 1 Score: 699 bits (1803), Expect = 2.880e-234 Identity = 539/898 (60.02%), Postives = 569/898 (63.36%), Query Frame = 3
Query: 132 GATGEVMGGCSPASLSSPMSSGSGGG---ASSNGTFEPS-SLDKFMETLDALSPDGQQLHVDKRQS---NNSMTXXXXXXXXXPFGGSRAARRGSNGSSSSRGGSQSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVSSGLKTPRTGSHHGHFTRVRRNSPVKLDPSVSSPTTXXXXXXXXXXXXXXXXXXXXXPKRKRSYAQLATY--ENGAPSPFPSDGAPKSSSKGLSNSSLTVHKDGAYMQVTFDDTHRFANEEDTPMN-PLGESLMNDPFLATPEPMPMPIQERKDIDQALSLLQLSGGSGSQSDLTRSARRNSGPSTGGKMTPGPASTLFPPLNQQARRSRSREGQDAVENIVPGSSTGASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAWGAKHPASV--------------------------------------------PRLLSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVPEKGAGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPAVQAPVSKPQGTKGGGPGSFCSKPEALSQLDTSQSDQMVLDADLWIVRERGDVCTSNECIYKDKSTGISSRRHYHATCDHRHKRGGPKGGMIFHHHQLEKIQKHQRAHIRTLHKKTPAEAVLSEGNVEPYLPNAWTEEEAGVLAHLVGLYGPTNWGIIAAGVATKSETQCMLHWRFALNGNATVKGTGTWQSVEDERMLSLVQIFGQRWSTVAEHMPGRLAKQCRERYLNNLDPELRRGTWSREEDEKLLQLRGQQNKSFAKIAEQINGRSYNDVKNRWSQISRQIAALK 2663
G E M GCSPASL+SPMS G A S G FE + SLDKFME+L SPDGQ LH+DKRQS N+SMT PFGGS ARR SNGS GG + XXXXXXXXXXXXXXXXX + S+GLKTPR+ + HGHFTRVRRNSPVKLDPS SSP+ PKRKR+Y+QLAT+ ENGAPSPFPSDG K++S+ LSNS LTVHKDGAYMQVTFDDTHRFA EED +N PLG+SLMNDPFLATPEP RKDIDQALSLLQLSGGSGSQ D VEN+VPGSS+GA WGAK PA V XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX RPAVQAPVSKPQGTKGGGPGSFCSK SD MVLDADLWIVRERG+ C+SNECIYKDK+TGISSRRHYHATCDHRHK GGPKGGMIFHHHQLEKIQKHQRAHIRTLHKKTPAEAVL+EGNVEPYLP WTE+EA VLAHLVG+YGPTNWGII+AGV TK+ETQCMLHWRFALNGNATVKGTGTWQSVEDERMLSLVQIFGQRWSTVAEHMPGRLAKQCRERYLNNLDPELRRG WSREEDEKLLQLRGQQNKSFAKIAEQI+GRSYNDVKNRWSQISRQIAALK
Sbjct: 13 GGRREEMVGCSPASLNSPMSGGXXXXXXRARSGGAFESNYSLDKFMESLGTFSPDGQPLHLDKRQSLESNSSMT---------PFGGS-TARRSSNGS---HGGGATAPGSCARATPNLRLRRSSAGGDSSVSRMSIGSGNGASEDGRSNXXXXXXXXXXXXXXXXXSN--------------------------TSSTGLKTPRSSARHGHFTRVRRNSPVKLDPS-SSPSRAGSGRRRREAASGSRS-----PKRKRNYSQLATFGDENGAPSPFPSDGGSKNASRVLSNSRLTVHKDGAYMQVTFDDTHRFAMEEDPHINQPLGDSLMNDPFLATPEPT---TGSRKDIDQALSLLQLSGGSGSQ--------------------------------------------DLVENVVPGSSSGAGASSQAGAGPSFSSATSPRSARGGGGR-----WGAKSPAGVHGHMLHHPSCSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTQKGKPKAKGQVGGQRPAVQAPVSKPQGTKGGGPGSFCSK-----------SDLMVLDADLWIVRERGEHCSSNECIYKDKTTGISSRRHYHATCDHRHK-GGPKGGMIFHHHQLEKIQKHQRAHIRTLHKKTPAEAVLNEGNVEPYLPQEWTEQEASVLAHLVGMYGPTNWGIISAGVGTKTETQCMLHWRFALNGNATVKGTGTWQSVEDERMLSLVQIFGQRWSTVAEHMPGRLAKQCRERYLNNLDPELRRGAWSREEDEKLLQLRGQQNKSFAKIAEQIDGRSYNDVKNRWSQISRQIAALK 801
BLAST of mRNA_S-firma_M_contig947.20450.1 vs. uniprot
Match: A0A6H5KQ17_9PHAE (MYB protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ17_9PHAE) HSP 1 Score: 231 bits (589), Expect = 3.620e-63 Identity = 127/268 (47.39%), Postives = 160/268 (59.70%), Query Frame = 3
Query: 1872 LSQLDTSQSDQMVLDADLWIVRERGDVCTSNECIYKDKSTGISSRRHYHATCDHRHKRGGPKGGMIFHHHQLEKIQKHQRAHIRTLHKKTPAEAVLSEGN-------VEPYLPNAWTEEEAGVLAHLVG-LYGPTN--WGIIAAGVATKSETQCMLHWRFALNGNATVKGTGTWQSVEDERMLSLVQIF-----GQRWSTVAEHMPGRLAKQCRERYLNNLDPELRRGT-WSREEDEKLLQLRGQQNKSFAKIAEQINGRSYNDVKNR 2627
L + D LD DLW+V E+G VCTS +C Y+D + I+SRRHYH+ C H H GG K GM FHHHQLEK+QKHQR+H R K P + E + VE Y P W +EE L LV L P W IA TK+ QC+LHWRF LN N ++G GTW + EDER+ L +F G RW+ +AE MPGR AKQCRERY N++DP +++ W+ EED ++QL + + FAKIA I GR Y+DVKNR
Sbjct: 197 LKPFEGGDDDDDGLDKDLWVVVEKGSVCTSRDCTYRDAAR-IASRRHYHSNCTHTHN-GGEKKGMAFHHHQLEKVQKHQRSHKREATKSAPYKRTTPEDHQAMEGAGVEGYRPTDWNQEETRKLDELVNQLVAPVTHAWPSIARYFPTKTGIQCLLHWRFTLNDNGIIRGNGTWGAEEDERLRKLAPVFSSPSTGPRWAKIAEVMPGRTAKQCRERYNNHVDPGIKKDKIWTAEEDALVMQLHAEHHNQFAKIARNIPGRCYDDVKNR 462
BLAST of mRNA_S-firma_M_contig947.20450.1 vs. uniprot
Match: D8LH85_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH85_ECTSI) HSP 1 Score: 234 bits (597), Expect = 1.920e-62 Identity = 131/288 (45.49%), Postives = 170/288 (59.03%), Query Frame = 3
Query: 1872 LSQLDTSQSDQMVLDADLWIVRERGDVCTSNECIYKDKSTGISSRRHYHATCDHRHKRGGPKGGMIFHHHQLEKIQKHQRAHIRTLHKKTPAEAVLSEGN-------VEPYLPNAWTEEEAGVLAHLVG-LYGPTN--WGIIAAGVATKSETQCMLHWRFALNGNATVKGTGTWQSVEDERMLSLVQIF-----GQRWSTVAEHMPGRLAKQCRERYLNNLDPELRRGT-WSREEDEKLLQLRGQQNKSFAKIAEQINGRSYNDVKNRWSQISRQIAALKKQSEKGKS 2687
L + D LD DLW+V E+G VCTS +C Y+D + I+SRRHYH+ C H H GG K GM FHHHQLEK+QKHQR+H R K P + E + VE Y P W +EE L LV L P W IA TK+ QC+LHWRF LN N ++G GTW + EDER+ L +F G RW+ +AE MPGR AKQCRERY N++DP +++ W+ EED ++QL + + FAKIA I GR Y+DVKNR++ + ++ K +E G S
Sbjct: 326 LKPFEGGDDDDDGLDKDLWVVVEKGSVCTSRDCTYRDAAR-IASRRHYHSNCTHTHN-GGEKKGMAFHHHQLEKVQKHQRSHKREATKSAPYKRTTPEDHQAMEGAGVEGYRPTDWNQEETRKLDELVNQLVAPVTHAWPSIARYFPTKTGIQCLLHWRFTLNDNGIIRGNGTWGAEEDERLRKLAPVFSSPSTGPRWAKIAEVMPGRTAKQCRERYNNHVDPGIKKDKIWTAEEDALVMQLHAEHHNQFAKIARNIPGRCYDDVKNRFNLLVKRRQVAVKAAESGLS 611
BLAST of mRNA_S-firma_M_contig947.20450.1 vs. uniprot
Match: D7FJZ9_ECTSI (Putative c-myb-like transcription factor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJZ9_ECTSI) HSP 1 Score: 209 bits (533), Expect = 1.640e-55 Identity = 117/282 (41.49%), Postives = 161/282 (57.09%), Query Frame = 3
Query: 1908 VLDADLWIVRERGDVCTSNECIYKDKSTGISSRRHYHATCDHRHKRGGPKGGMIFHHHQLEKIQKHQRAHIRTLHKKTPAEAV-----------------------------------LSEGNVEPYLPNAWTEEEAGVLAHLVGLYGPTNWGIIAAGVATKSETQCMLHWRFALNGNATVKGTGTWQSVEDERMLSLVQIFGQRWSTVAEHMPGRLAKQCRERYLNNLDPELRRGT-WSREEDEKLLQLRGQQNKSFAKIAEQINGRSYNDVKNRWSQISR 2645
+LD LW V ER VCT+ +C Y+ + + RRHYHA C+H H+ G KG M F HHQLEK+QKHQRAH + + T ++ + + NVE + P WT E L LV GP W IA + K+ T CMLHWR +N + VKG+GTW + EDER+ LV++ G +WS +A H+PGR+AKQCRERYLN+LDP LR+ W+ +E+ L++L + +A+I Q++GRSYNDV+NR++ I R
Sbjct: 115 MLDPKLWTVVERRAVCTAKQCAYRSEEDHRARRRHYHALCNHVHQNGERKG-MRFQHHQLEKVQKHQRAHQVSAKQNTQRSSIGSSAAKPRSPTTVAAAPRNKRVAAATSGQKEQTRAIKDANVEAHSPKDWTPELTKRLRDLVDELGP-KWSNIADKMPGKTATACMLHWRVGVNPDHMVKGSGTWTAEEDERLSKLVEVVGMKWSDLARHIPGRIAKQCRERYLNHLDPSLRKDMPWTEDEEALLMRLCFAKQNQWAEICRQLHGRSYNDVQNRFNLIQR 394
BLAST of mRNA_S-firma_M_contig947.20450.1 vs. uniprot
Match: A0A6H5JMK3_9PHAE (MYB protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMK3_9PHAE) HSP 1 Score: 215 bits (547), Expect = 9.950e-54 Identity = 120/277 (43.32%), Postives = 160/277 (57.76%), Query Frame = 3
Query: 1908 VLDADLWIVRERGDVCTSNECIYKDKSTGISSRRHYHATCDHRHKRGGPKGGMIFHHHQLEKIQKHQRAHIRTLHKKTPAEAV------------------------------LSEGNVEPYLPNAWTEEEAGVLAHLVGLYGPTNWGIIAAGVATKSETQCMLHWRFALNGNATVKGTGTWQSVEDERMLSLVQIFGQRWSTVAEHMPGRLAKQCRERYLNNLDPELRRGT-WSREEDEKLLQLRGQQNKSFAKIAEQINGRSYNDVKNRWSQISR 2645
+LD LW V ER VCT+ +C Y+ + + RRHYHA C+H H+ G KG M F HHQLEK+QKHQRAH T + A + + NVE + P WT E L LV GP W IA + K+ T CMLHWR +N N VKG+GTW + EDER+ LV++ G +WS +A+H+PGR+AKQCRERYLN+LDP LR+ W+ +E+ L++L + +A+I Q++GRSYNDVKNR++ I R
Sbjct: 858 MLDPKLWTVVERRAVCTAKQCAYRSEEDHRARRRHYHALCNHVHQNGERKG-MRFQHHQLEKVQKHQRAHQNTQTSSIGSSAAKPRSPTTVATAPRNKRVAAASNGQKEQTRAIKDANVEAHSPKDWTPELTKRLRDLVDELGP-KWSNIADKMPGKTATACMLHWRVGVNPNHMVKGSGTWTAEEDERLSKLVEVVGMKWSDLAKHIPGRIAKQCRERYLNHLDPSLRKDMPWTEDEEALLMRLCFAKQNQWAEICRQLHGRSYNDVKNRFNLIQR 1132
BLAST of mRNA_S-firma_M_contig947.20450.1 vs. uniprot
Match: A0A835YQW6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQW6_9STRA) HSP 1 Score: 179 bits (454), Expect = 1.370e-46 Identity = 103/242 (42.56%), Postives = 133/242 (54.96%), Query Frame = 3
Query: 1953 CTSNECIYKDKSTGISSRRHYHATCDHRHKRGGPKGGMIFHHHQLEKIQKHQRAHIRTL--------HKKTPAEAVLSEGNVEPYLPNAWTEEEAGVLAHLVGLYGPTN-----WGIIAAGVA------TKSETQCMLHWRFALNGNATVKGTGTWQSVEDERMLSLVQIFGQRWSTVAEHMPGRLAKQCRERYLNNLDPELRRGTWSREEDEKLLQLRGQQNKSFAKIAEQINGRSYNDVK 2621
C + C +D ++ ++ RRHYHA C+HRH G PK GM FHHHQLEKI+KHQ AH H A L+ +E + P AW E L LV GP WG +A T S QC+LHWR +N V G TW VED R+ SLV +FG +WS VA+ +PGR KQCRER+LN +DP R W+ EEDE LL++ + FA+ A+ + RSYN+V+
Sbjct: 18 CHAEMCTLRDDASLVARRRHYHARCEHRHSTG-PKTGMRFHHHQLEKIRKHQSAHAAEASRDRGGAPHLDPSMMAELNSHGIELHNPEAWPPEATRHLDTLVR--GPVGRPSSAWGEFPRALAAALPGFTVSPQQCLLHWRLVINNGGAVTGVRTWSDVEDARLNSLVNMFGTKWSAVAQLLPGREPKQCRERFLNVVDPSKTRKAWTPEEDELLLRVHDRVRNQFARTAKYFSDRSYNEVR 256
BLAST of mRNA_S-firma_M_contig947.20450.1 vs. uniprot
Match: A0A836CC17_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CC17_9STRA) HSP 1 Score: 179 bits (453), Expect = 1.420e-46 Identity = 111/278 (39.93%), Postives = 143/278 (51.44%), Query Frame = 3
Query: 1911 LDADLWIVRERGDVCTSNECIYKDKSTGISSRRHYHATCDHRHKRGGPKGGMIFHHHQLEKIQKHQRAHIRTLHKKTPAEAV--------------LSEGNVEPYLPNAWTEEEAGVLAHLV----------GLYGPTNWGIIAAGVATK--------SETQCMLHWRFALNGNATVKGTGTWQSVEDERMLSLVQIFGQRWSTVAEHMPGRLAKQCRERYLNNLDPEL-RRGTWSREEDEKLLQLRGQQNKSFAKIAEQINGRSYNDVKNRWSQISR 2645
+D LW+ GD C + +C + +T +++RRHYHA CDHRH G K GM FHHHQLEKI+KHQR H R + E L+ +E + W+ L LV G G W +AA +A + S QCML WR +N ATV G GTW ED+R+ LV F Q WS+VA +MPGR KQCRER+ N ++P L R G W+ EED L + Q FA A + G SYNDVKNR++ + R
Sbjct: 1 IDPALWVRVNLGDRCEAAQCTLRAPATRLATRRHYHAKCDHRHG-AGAKAGMRFHHHQLEKIRKHQRVHARRAAAASAEEQTWNSPSAVPPDVTEALAAAGLELHDVRVWSAAATDRLRGLVEAQQQRTSGGGAAGRVAWEAVAAALAAERGEGEAELSAAQCMLQWRAVVNQGATVTGVGTWCEPEDKRLAVLVAHFNQAWSSVARYMPGREPKQCRERFNNVVNPALLRSGPWTPEEDALLESMMQQTGHRFADAARCLPGHSYNDVKNRFNTLQR 277
BLAST of mRNA_S-firma_M_contig947.20450.1 vs. uniprot
Match: A0A835ZA42_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZA42_9STRA) HSP 1 Score: 153 bits (387), Expect = 2.140e-38 Identity = 94/222 (42.34%), Postives = 119/222 (53.60%), Query Frame = 3
Query: 1953 CTSNECIYKDKSTGISSRRHYHATCDHRHKRGGPKGGMIFHHHQLEKIQKHQRAHIRT----LHKKTP------------AEAVLSEGNVEPYLPNAWTEEEAGVLAHLVGLY------GPTNWGIIAAGVATK--SETQCMLHWRFALNGNATVKGTGTWQSVEDERMLSLVQIFGQRWSTVAEHMPGRLAKQCRERYLNNLDPEL-RRGTWSREEDEKLL 2543
C + +C + T +++RRHYHATC H H G K GM FHHHQLEKI+KHQRAH R+ L P AEA+L G E Y P W+ + L LV G W +AA + S +QCMLHWR +NG A + G GTW + ED R+ +L F Q W+T+A MPGR KQCRER+ N +DP +R W EDE L+
Sbjct: 4 CEAQDCTMRAAGTRLATRRHYHATCGHVHA-SGAKAGMRFHHHQLEKIRKHQRAHKRSSVIALTAPAPDSPYPGGLPVEVAEALLR-GGAELYDPALWSADAGARLGALVEQQHARRGVGRVAWDKVAAAMRAPALSASQCMLHWRDVVNGGAIIMGVGTWCNAEDTRLRALTAHFRQSWATIARFMPGRGPKQCRERFNNVIDPASHKRAPWKPAEDELLM 223
BLAST of mRNA_S-firma_M_contig947.20450.1 vs. uniprot
Match: A0A836CND7_9STRA (Homeodomain-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CND7_9STRA) HSP 1 Score: 139 bits (350), Expect = 3.680e-34 Identity = 66/123 (53.66%), Postives = 92/123 (74.80%), Query Frame = 3
Query: 2298 QCMLHWRFALNGNATVKGTGTWQSVEDERMLSLVQIFGQRWSTVAEHMPGRLAKQCRERYLNNLDPELRRGTWSREEDEKLLQLRGQQNKSFAKIAEQINGRSYNDVKNRWSQISRQIAALKK 2666
QC+LHWR+ALN + V+G G+W ED R+ +LV + G +W+ VA MPGR+AKQCRERYLN+LDP+L+RG W+ EE++ LL+L QN+ +A+I Q+ GRSYNDVKNR++ I R++ K
Sbjct: 2 QCLLHWRYALNEDQQVRGIGSWSVEEDARLKALVTVHGCKWALVARSMPGRVAKQCRERYLNHLDPKLQRGPWTPEEEQVLLRLCEGQNRQWAEICRQLPGRSYNDVKNRYNLIQRRLKRASK 124 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig947.20450.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_M_contig947.20450.1 >prot_S-firma_M_contig947.20450.1 ID=prot_S-firma_M_contig947.20450.1|Name=mRNA_S-firma_M_contig947.20450.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=912bp MPDNGERSEGKTVAPGATGEVMGGCSPASLSSPMSSGSGGGASSNGTFEPback to top mRNA from alignment at S-firma_M_contig947:14563..24642- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_M_contig947.20450.1 ID=mRNA_S-firma_M_contig947.20450.1|Name=mRNA_S-firma_M_contig947.20450.1|organism=Sphaerotrichia firma Sfir_13m male|type=mRNA|length=10080bp|location=Sequence derived from alignment at S-firma_M_contig947:14563..24642- (Sphaerotrichia firma Sfir_13m male)back to top Coding sequence (CDS) from alignment at S-firma_M_contig947:14563..24642- >mRNA_S-firma_M_contig947.20450.1 ID=mRNA_S-firma_M_contig947.20450.1|Name=mRNA_S-firma_M_contig947.20450.1|organism=Sphaerotrichia firma Sfir_13m male|type=CDS|length=5472bp|location=Sequence derived from alignment at S-firma_M_contig947:14563..24642- (Sphaerotrichia firma Sfir_13m male)back to top |