mRNA_S-firma_M_contig9459.20439.1 (mRNA) Sphaerotrichia firma Sfir_13m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-firma_M_contig9459.20439.1
Unique NamemRNA_S-firma_M_contig9459.20439.1
TypemRNA
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Homology
BLAST of mRNA_S-firma_M_contig9459.20439.1 vs. uniprot
Match: D7FIP6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIP6_ECTSI)

HSP 1 Score: 650 bits (1677), Expect = 1.090e-223
Identity = 382/532 (71.80%), Postives = 441/532 (82.89%), Query Frame = 1
Query:   79 LRLISSGIPAHAYGQGEQHWDHLVTEQQWDMTIPIISDENGIDVLSTLQRDVEPTEFLVEAAREDRPIGMAVNGVPFFSPLTPTGADTVNPLPGQVAENDTLFDECAGSLQASTGAYGYRVMPPCLYGEPSTSVLEAGGYERSNALLGFQGDDTDGSLSHPPESPVLGFALDGRKIYGPYDSTGTLAGGLDVCNGRWEQQANNTGDGSSGVYVYTYRASPSFPYLIGCYGPAGTPLDATLAATAAMG-----IVSESGGYVYSKVDGGFILQVPEDGCPAGSFLNTESEACEACRAGTYGKDAGIAGRKCPGVCPRGYYCPDGTATPTLRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPDSNECGSIMFFCPRGSGQRTPVSNGYYTIN-VPPEGS-PTSLVDAEHSTAAAR-TRSAEAQCESGTFCVAGRRRLCPAGTFGATPGLTSPTCSGACPAGNYCPEGTVEPIPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSAFQYACPAGRFGEASGLTDGLCAE 1650
            +RL+SSGIP H+YGQG++ W HLV EQ+WD+TIP+ SDE+GID    L RDV+PTEFL  AAREDRPIGMA+NGVPFFSPLT TGADTVNPLPG+VAEN+TLFDECAGSLQA TGAYGYRVMPPCL+GE S +VLEAGGY+ +N LLGF+ ++ +G  S P ESP+LGFA+DGR++YGPYDST +LA GLDVCNGRWE+Q ++ G  ++GVY YTYRA+PSFPYL+GC+GPAG P+ A  A T A G     + SESGG+VYSK++GGFI++  EDGCPAGSFL+ +S ACEACRAGTYGK AG+ G+ CPGVCPRG+YCPDGTATPTLR  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPDSNECGS+ ++CP+GSGQRTPV++GYYT   V P+GS P +  DAE  TA AR  RS EAQCE+GTFCV GRRR CP+GTFGAT GLTS  CS  CP G+YCPEG+ EPI XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX V+AFQYA            TDGLCAE
Sbjct:    1 MRLVSSGIPVHSYGQGDEPWAHLVKEQRWDLTIPLTSDEDGIDAQIALSRDVDPTEFLTNAAREDRPIGMALNGVPFFSPLTATGADTVNPLPGKVAENETLFDECAGSLQAKTGAYGYRVMPPCLHGETSAAVLEAGGYKAANVLLGFEDENPEGLPSTPRESPLLGFAMDGRRLYGPYDSTLSLAWGLDVCNGRWEEQVDDIGGSTAGVYAYTYRATPSFPYLVGCWGPAGVPIGAASAMTTAAGAAAGDVASESGGFVYSKIEGGFIVEAVEDGCPAGSFLSIDSGACEACRAGTYGKSAGLVGKGCPGVCPRGFYCPDGTATPTLRCPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPDSNECGSMRYYCPKGSGQRTPVTSGYYTTTAVTPDGSRPGASADAEQETATARRVRSGEAQCEAGTFCVGGRRRPCPSGTFGATKGLTSSNCSDVCPEGSYCPEGSTEPIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVAAFQYAXXXXXXXXXXXXTDGLCAE 532          
BLAST of mRNA_S-firma_M_contig9459.20439.1 vs. uniprot
Match: A0A7S2S4K2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S4K2_9STRA)

HSP 1 Score: 130 bits (328), Expect = 1.270e-29
Identity = 124/405 (30.62%), Postives = 167/405 (41.23%), Query Frame = 1
Query:   52 DWDRNGRWFLRLISSGIPAHAYGQGEQHWDHLVTEQQWDMTIPIISDENGIDVLSTLQRDVEPTEFLVEAAR---EDRPIGMAVNGVPFFSPLTPTGADTVNPLPGQVAENDTLFDECAGSL--QASTGAYGYRVMPPCLYGEPSTSVLEAGGYERSNALLGFQGDDTDGSLSHPPESPVLGFALDGRKIYGPYDSTGTLAGGLDVCNGRWEQQANNTGDGSSGVYVYTYRASPSFPYLIGCYGPAGTPLDATLAATAAMGIVSESGGYVYSKVDGGFILQVPEDGCPAG---SFLNTESEACEACRAGTYGKDAGIAGRKCPGVCPRGYYCPDGTATPTLRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPDSNECGSIMFFCPRGSGQRTPVSNGYYTI 1242
            D+D  G   L + S+G+P H         + L   Q W  ++ +             +  V P     E  R   +D P+G+A+NGVPFF+           P P    E     DEC G+    A++GAY YR  PPCL G+ + +      Y+  + L GF       S   P    +LG+ LDG  +YGP+D+ G L   LD CNG++   A            Y Y A+P+FPY+ GC+GP G  +   +       + S S                P+  CPAG   S L      CE C  G +G        +C   C  G+YCP GT  P L                     XXXXXXXX    +  +  CG    FCP GS   TPV  GYYT+
Sbjct:   76 DFDL-GDLVLHVTSTGLPDHT---SRLVSEGLAQSQPWSFSLRLP------------RGGVPPEAPRPEGGRALPQDSPVGVALNGVPFFAA----------PAPLDELEAGEALDECLGTTLDTATSGAYVYRAAPPCLDGQTTVA------YDLQSMLEGF-------SRRQPK---ILGYMLDGFPLYGPFDAAGNLHTDLDSCNGKFVDGA------------YAYYATPNFPYIAGCFGP-GVQVQQQVELPP---LASSS--------------SAPDTECPAGMQPSLLG----GCELCPGGRHGP-------RCERECGPGFYCPPGTLAP-LPCPAGRYGASPGLVSADCSGPXXXXXXXXEQSTSATAQPCGGPHVFCPEGSTLPTPVVAGYYTV 396          
BLAST of mRNA_S-firma_M_contig9459.20439.1 vs. uniprot
Match: F0YLW7_AURAN (MYND-type domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YLW7_AURAN)

HSP 1 Score: 118 bits (295), Expect = 5.190e-24
Identity = 113/378 (29.89%), Postives = 149/378 (39.42%), Query Frame = 1
Query:    4 PHPFANTYLLYLNGLLDWDRNGRWFLRLISSGIPAHAYGQGEQHWDHLVTEQQWDMTIPIISDENGIDVLSTLQRDVEPTEFLVEAAREDRPIGMAVNGVPFFSPLTPTGADTVNPLPGQVAENDTLFDECAGSLQASTGAYGYRVMPPCLYGEPSTSVLEAGGYERSNALLGFQGDDTDGSLS------HPPESPVLGFALDGRKIYGPYDSTGTLAGGLDVCNGRWEQQ----------------ANNTGDGSSGVYVYTYRASPSFPYLIGCYGPAGTPLDATLAATAAMGIVSESGGYVYSKVDGGFILQVPEDGCPAGSFLNTESEACEACRAGTYGKDA---------GIAGRKCPGVCPRGYYCPDGTATP 1044
            P  F     + +  L+D+D N  +     ++G+P H Y       D       +D  + +  D          QR        + AA    PIG AV+GVP F      GA+ V P PG    +    D C G    S+GAY YR+ PPCLYG+   +     G   + A LGF      G  +       P   P++G  +DG  ++GP D  G   GGLD C G+++                  +    DG  G Y Y   A+P  PY I C+GP G    A L  T      S   G V +  D           CPAG  +   + AC AC AG Y  +A         G   R C G C  G YCP GT  P
Sbjct:   19 PSHFLRDADVAVEQLVDYDANAEFLEISSATGLPLHRY-------DASFGAHPYDAVVALPGDPAAYR-----QRGFHFGGADLPAAG---PIGYAVDGVPIFPYYDGDGANAVEPPPGGAPADR---DGCWGFRDPSSGAYVYRIAPPCLYGDDRGTY----GSPAAAAHLGFGAAVAPGGTAAARARGRPGSVPLVGVMVDGFPLWGPLDKDGKEHGGLDECGGKYQGSTRVRNSQLQRLRSRPFSTRKYDGR-GRYAYYATAAP--PYTIACFGP-GVAAAAGLPPTPP---ASPGAGAVDAGPD-----------CPAGRHV--AAGACAACPAGRYALEAPAGRAAYAAGSPARHCGGSCGLGAYCPAGTPRP 354          
BLAST of mRNA_S-firma_M_contig9459.20439.1 vs. uniprot
Match: A0A7S4ED36_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4ED36_9STRA)

HSP 1 Score: 117 bits (292), Expect = 9.980e-24
Identity = 148/508 (29.13%), Postives = 192/508 (37.80%), Query Frame = 1
Query:   52 DWDRNGRWFLRLISSGIPAHAYGQGEQHWDHLVTEQQWDMTIPIISDENGIDVLSTLQRDVEPTEFLVEAAR------EDRPIGMAVNGVPFFSPLTPTGADTVNPLPGQVAENDTLFDECAGSLQASTGAYGYRVMPPCLYGEPSTSVLEAGGYERSNALLGFQGD-DTDGSLSHPPESP-----VLGFALDGRKIYGPYDSTGTLAGGLDVCNGRWEQQANNTGDGSSGVYVYTYRASPSFPYLIGCYGPAGTPLDATLAATAAMGIVSESGGYVYSKVDGGFILQVPEDGCPAGSFLNTESEACEACRAGTYGKDAGIAGRKCP---------GVCPRGYYCPDGTATPTLRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPDSNECGSIMFFCPRGSGQRTPVSNGYYTIN------VPPEGSPTSLVDAEHSTAAARTRSAEA-------QCESGTFCVAGRRRLCPAGTFGATPGLTSPTCSGACPAGNYCPEGTVEP 1473
            D+D  GR  L + S+G+P H +                      +S E G+ V  T    + P +++            + PIG+AVNGV  ++  T                N T  D C G      GAY Y    PCL+G+            R  A +GF      DG+ +  P S      V+G   DG  +YGP D  G +  GLD C G+++ +             Y Y AS   PY I C+GP         AAT    I                     +D  P         +A  AC AG      G                G CP G+YC +G+A P                    XXXXXXXXXXXXXXX  +   CGS   +CP GS        G YT          PE       +  + TAAA      A       QCE G FC  G +  CP G +G+   L +P C+ ACPAG YCPEG++EP
Sbjct:   33 DYDL-GRDILDVASTGLPHHKFD---------------------VSFEPGVPVAFTATLPL-PEDYVQRGVAFGGRPLPEGPIGVAVNGVAIYAYNT----------------NLTKRDGCFGHKIG--GAYVYVEAFPCLFGDDRNEYHTV----REAAYIGFGTSVRPDGTAAADPRSRFFRSGVIGVMNDGFPLYGPVDEHGNIHQGLDECGGKYDNEGE-----------YAYYASLEPPYTIACFGPG-------YAATPPSPI---------------------KDAVPR----TANDDAAPACPAGAIATSKGCTNXXXXXXXXXXXXXGTCPPGHYCLEGSAGPEAAVECPGGVFGDVRGLRDAXXXXXXXXXXXXXXXXLEPRPCGSEDRYCPAGSSAPILADAGAYTTPQMASAWAHPEAPYCMASEGANCTAAAIASRPLAPRQTGIQQCEPGHFCTQGIKFRCPGGRYGSEHHLKTPNCTAACPAGTYCPEGSLEP 452          
BLAST of mRNA_S-firma_M_contig9459.20439.1 vs. uniprot
Match: A0A1V9ZD70_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZD70_9STRA)

HSP 1 Score: 102 bits (255), Expect = 3.610e-19
Identity = 64/193 (33.16%), Postives = 81/193 (41.97%), Query Frame = 1
Query:  895 CPAGSFLNTESEACEACRAGTYGKDAGIAGRKCPGVCPRGYYCPDGTATPTLRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPDSNECGSIMFFCPRGSGQRTPVSNGYYTINVPPEGSPTSLVDAEHSTAAARTRSAEAQCESGTFCVAGRRRLCPAGTFGATPGLTSPTCSGACPAGNYCPEGTVEP 1473
            CP GS+        ++C  G YG  + ++   C G+CP G+YCP GT  P                                         CGS   +CP GS    PV  GYY++ V                     R + A CE G +C  G    CP+GTFGATPGL +PTCS  CPAG+YCPEG+  P
Sbjct:   38 CPPGSYCRNNQ--VQSCPPGVYGNKSELSTPHCSGLCPSGHYCPRGTIIPL---------------------------------------PCGSPEVYCPLGSVTTIPVPAGYYSLGVD-----------------VTQRESIALCEPGFYCDLGTMSPCPSGTFGATPGLMTPTCSDICPAGSYCPEGSEMP 172          
BLAST of mRNA_S-firma_M_contig9459.20439.1 vs. uniprot
Match: A0A024UCP5_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UCP5_9STRA)

HSP 1 Score: 102 bits (253), Expect = 6.460e-19
Identity = 67/195 (34.36%), Postives = 84/195 (43.08%), Query Frame = 1
Query:  895 CPAGSFLNTESEACEACRAGTYGKDAGIAGRKCPGVCPRGYYCPDGTATPTLRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPDSNECGSIMFFCPRGSGQRTPVSNGYYTINVPPEGSPTSLVDAEHSTAAARTRSAEAQCESGTFCVAGRRRLCPAGTFGATPGLTSPTCSGACPAGNYCPEGTVEPIP 1479
            CP GS+    +     C  G YG   G+    C G CP G+YCP GT TP                                         C     +CP  S +   VS GYY++   P  SP              TRS +  C+ G++C  G +  CPAG+FG T GLTS +CSG CPAG+YCP GTVEP+P
Sbjct:  258 CPPGSYCI--NGLVTPCPLGRYGNATGLTTALCSGPCPEGFYCPVGTETPIA---------------------------------------CLDPSTYCPIESSKPQVVSLGYYSL---PTASP--------------TRSLQLPCDPGSYCANGVKTKCPAGSFGITLGLTSSSCSGTCPAGSYCPAGTVEPLP 394          
BLAST of mRNA_S-firma_M_contig9459.20439.1 vs. uniprot
Match: G5AFJ8_PHYSP (Uncharacterized protein (Fragment) n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G5AFJ8_PHYSP)

HSP 1 Score: 98.6 bits (244), Expect = 4.510e-18
Identity = 59/193 (30.57%), Postives = 83/193 (43.01%), Query Frame = 1
Query:  895 CPAGSFLNTESEACEACRAGTYGKDAGIAGRKCPGVCPRGYYCPDGTATPTLRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPDSNECGSIMFFCPRGSGQRTPVSNGYYTINVPPEGSPTSLVDAEHSTAAARTRSAEAQCESGTFCVAGRRRLCPAGTFGATPGLTSPTCSGACPAGNYCPEGTVEP 1473
            C AGS+   +   C  C  G +G   G+    C G+C  G++CP+G+ +                                     P    CG+ +        +R  V  GYYTI  P + S   ++D+    A  + R     CE G +CV G RR+CPAG +G +  +TSPTCS  CP G+YCPE T  P
Sbjct:   30 CNAGSYF--DGVKCSRCPGGRFGAAPGLTSSACSGLCNAGFFCPEGSTS-------------------------------------PQEKPCGTSVXXXXXXXAERRKVDEGYYTIKFPTDQSNLPMIDSSLGGAGRQIR-----CEKGYYCVFGIRRVCPAGVYGDSTKMTSPTCSAPCPKGSYCPEATNVP 178          
BLAST of mRNA_S-firma_M_contig9459.20439.1 vs. uniprot
Match: A0A067CQQ8_SAPPC (YHYH domain-containing protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CQQ8_SAPPC)

HSP 1 Score: 99.4 bits (246), Expect = 6.780e-18
Identity = 79/257 (30.74%), Postives = 116/257 (45.14%), Query Frame = 1
Query:   76 FLRLISSGIPAHAYGQGEQHWD-HLVTEQQWDMTIPIISDENGIDVLSTLQRDVEPTEFLVEAAREDRPIGMAVNGVPFFSPLTPTGADTVNPLPGQVAENDTLFDECAGSLQASTGAYGYRVMPPCLYGEPSTSVLEAGGYERSNALLGFQGDDTDGSLSHPPESPVLGFALDGRKIYGPYDSTGTLAGGLDVCNGRWEQQANNTGDGSSGVYVYTYRASPSFPYLIGCY-----GPAGTPLDATLAATAAMGIVS 828
            FL + S+G+P   +G     ++ H +  + +   +P     + +           PT+ L       RPIG+ +NG+PF+S    +G    NP       N  + D C G +   TGAY Y   P CL                 +AL     +D  G+      SP++G+ALDG  IYG YDSTG +  GLD CNG+W        DGS     Y Y  + + PY IGC+       +G PL  +L+A++A+ I S
Sbjct: 4154 FLYVSSTGLPDGVFGPFPNAYNPHKIKRRAYTFVLPRSPTWSNV-----------PTQVL-----PGRPIGVMLNGIPFYSYTDSSGNSLRNPA----TANYLILDACNGYVDG-TGAYRYYAAPDCLL----------------DAL-----NDVAGT-----PSPIVGYALDGYPIYGRYDSTGAMPLGLDACNGKWHV------DGS-----YGYHVTDAPPYTIGCFHGVVPATSGAPLYRSLSASSAITISS 4352          
BLAST of mRNA_S-firma_M_contig9459.20439.1 vs. uniprot
Match: A0A6A4ZQN3_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4ZQN3_9STRA)

HSP 1 Score: 94.0 bits (232), Expect = 7.450e-17
Identity = 58/160 (36.25%), Postives = 71/160 (44.38%), Query Frame = 1
Query:  994 PGVCPRGYYCPDGTATPTLRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPDSNECGSIMFFCPRGSGQRTPVSNGYYTINVPPEGS---PTSLVDAEHSTAAARTRSAEAQCESGTFCVAGRRRLCPAGTFGATPGLTSPTCSGACPAGNYCPEGT 1464
            P  C  GYYCP GT TP                                        ECG I  +CP GS   T VS GYYTI+ P   +   PT +     +   A  R  +  CE G +C  G++R C +GT+GAT GLT+  CSG CP G YCPEG+
Sbjct:  126 PPYCRAGYYCPLGTLTPL---------------------------------------ECGGIEVYCPEGSSIPTTVSPGYYTISTPTLNTVDGPTYITGQTQALTVATIRVNQQICERGMYCTQGQKRKCSSGTYGATEGLTTALCSGTCPVGYYCPEGS 246          
BLAST of mRNA_S-firma_M_contig9459.20439.1 vs. uniprot
Match: W4GA05_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GA05_9STRA)

HSP 1 Score: 94.4 bits (233), Expect = 1.000e-16
Identity = 58/160 (36.25%), Postives = 72/160 (45.00%), Query Frame = 1
Query:  994 PGVCPRGYYCPDGTATPTLRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPDSNECGSIMFFCPRGSGQRTPVSNGYYTINVPPEGS---PTSLVDAEHSTAAARTRSAEAQCESGTFCVAGRRRLCPAGTFGATPGLTSPTCSGACPAGNYCPEGT 1464
            P  C  GYYCP GT TP                                        ECG I  +CP GS   T VS GYYTI+ P   +   PT +     +  AA  R  +  CE G +C  G++R C +GT+GAT GLT+  C+G CP G YCPEG+
Sbjct:  240 PPYCRAGYYCPLGTLTPL---------------------------------------ECGGIEVYCPEGSSIPTTVSPGYYTISTPTLNTVDGPTYITGQTQALTAATIRVNQQICERGMYCTQGQKRKCSSGTYGATEGLTTALCTGTCPVGYYCPEGS 360          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig9459.20439.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FIP6_ECTSI1.090e-22371.80Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2S4K2_9STRA1.270e-2930.62Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
F0YLW7_AURAN5.190e-2429.89MYND-type domain-containing protein n=1 Tax=Aureoc... [more]
A0A7S4ED36_9STRA9.980e-2429.13Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A1V9ZD70_9STRA3.610e-1933.16Uncharacterized protein n=1 Tax=Thraustotheca clav... [more]
A0A024UCP5_9STRA6.460e-1934.36Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
G5AFJ8_PHYSP4.510e-1830.57Uncharacterized protein (Fragment) n=1 Tax=Phytoph... [more]
A0A067CQQ8_SAPPC6.780e-1830.74YHYH domain-containing protein n=1 Tax=Saprolegnia... [more]
A0A6A4ZQN3_9STRA7.450e-1736.25Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
W4GA05_9STRA1.000e-1636.25Uncharacterized protein n=3 Tax=Aphanomyces astaci... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig9459contigS-firma_M_contig9459:255..3727 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-19
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score114.0
Seed ortholog evalue2.2e-22
Seed eggNOG ortholog164328.Phyra96524
KEGG rclassRC00005
KEGG koko:K00694,ko:K10999,ko:K20924
KEGG TC4.D.3.1.2,4.D.3.1.4,4.D.3.1.5,4.D.3.1.6,4.D.3.1.7,4.D.3.1.9
KEGG ReactionR02889
KEGG Pathwayko00500,ko01100,ko02026,map00500,map01100,map02026
GOsGO:0000271,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005829,GO:0005938,GO:0005975,GO:0005976,GO:0006073,GO:0008150,GO:0008152,GO:0008194,GO:0009058,GO:0009059,GO:0009250,GO:0009653,GO:0009987,GO:0010927,GO:0016020,GO:0016043,GO:0016051,GO:0016740,GO:0016757,GO:0016758,GO:0016759,GO:0016760,GO:0022607,GO:0030154,GO:0030243,GO:0030244,GO:0030435,GO:0030587,GO:0031150,GO:0031154,GO:0032502,GO:0032989,GO:0033692,GO:0034637,GO:0034645,GO:0035251,GO:0042244,GO:0042546,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043934,GO:0044042,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044424,GO:0044444,GO:0044448,GO:0044464,GO:0045177,GO:0045179,GO:0045229,GO:0046527,GO:0048646,GO:0048856,GO:0048869,GO:0051273,GO:0051274,GO:0051703,GO:0051704,GO:0070590,GO:0070726,GO:0071554,GO:0071555,GO:0071704,GO:0071840,GO:0071944,GO:0090702,GO:0099120,GO:0099568,GO:0099738,GO:1901576
EggNOG free text desc.Cellulose synthase
EggNOG OGs2QQSH@2759,3QCHY@4776,COG1215@1
EC2.4.1.12
COG Functional cat.M
CAZyGT2
Best tax levelPeronosporales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01003,ko02000
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionInsulin-like growth factor binding protein, N-terminal
Ec32 orthologEc-27_000560.1
Exons7
Model size1656
Cds size1656
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622828779.3024418-CDS-S-firma_M_contig9459:254..4091622828779.3024418-CDS-S-firma_M_contig9459:254..409Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig9459 255..409 -
1697105157.5238905-CDS-S-firma_M_contig9459:254..4091697105157.5238905-CDS-S-firma_M_contig9459:254..409Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig9459 255..409 -
1622828779.3189297-CDS-S-firma_M_contig9459:828..10161622828779.3189297-CDS-S-firma_M_contig9459:828..1016Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig9459 829..1016 -
1697105157.540445-CDS-S-firma_M_contig9459:828..10161697105157.540445-CDS-S-firma_M_contig9459:828..1016Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig9459 829..1016 -
1622828779.3365474-CDS-S-firma_M_contig9459:1317..14881622828779.3365474-CDS-S-firma_M_contig9459:1317..1488Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig9459 1318..1488 -
1697105157.5497973-CDS-S-firma_M_contig9459:1317..14881697105157.5497973-CDS-S-firma_M_contig9459:1317..1488Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig9459 1318..1488 -
1622828779.351101-CDS-S-firma_M_contig9459:1868..20111622828779.351101-CDS-S-firma_M_contig9459:1868..2011Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig9459 1869..2011 -
1697105157.5602198-CDS-S-firma_M_contig9459:1868..20111697105157.5602198-CDS-S-firma_M_contig9459:1868..2011Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig9459 1869..2011 -
1622828779.3661325-CDS-S-firma_M_contig9459:2228..27411622828779.3661325-CDS-S-firma_M_contig9459:2228..2741Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig9459 2229..2741 -
1697105157.5703864-CDS-S-firma_M_contig9459:2228..27411697105157.5703864-CDS-S-firma_M_contig9459:2228..2741Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig9459 2229..2741 -
1622828779.3786933-CDS-S-firma_M_contig9459:2957..31121622828779.3786933-CDS-S-firma_M_contig9459:2957..3112Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig9459 2958..3112 -
1697105157.580108-CDS-S-firma_M_contig9459:2957..31121697105157.580108-CDS-S-firma_M_contig9459:2957..3112Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig9459 2958..3112 -
1622828779.3923998-CDS-S-firma_M_contig9459:3396..37271622828779.3923998-CDS-S-firma_M_contig9459:3396..3727Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig9459 3397..3727 -
1697105157.5902774-CDS-S-firma_M_contig9459:3396..37271697105157.5902774-CDS-S-firma_M_contig9459:3396..3727Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig9459 3397..3727 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig9459.20439.1prot_S-firma_M_contig9459.20439.1Sphaerotrichia firma Sfir_13m malepolypeptideS-firma_M_contig9459 255..3727 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-firma_M_contig9459.20439.1

>prot_S-firma_M_contig9459.20439.1 ID=prot_S-firma_M_contig9459.20439.1|Name=mRNA_S-firma_M_contig9459.20439.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=552bp
CPHPFANTYLLYLNGLLDWDRNGRWFLRLISSGIPAHAYGQGEQHWDHLV
TEQQWDMTIPIISDENGIDVLSTLQRDVEPTEFLVEAAREDRPIGMAVNG
VPFFSPLTPTGADTVNPLPGQVAENDTLFDECAGSLQASTGAYGYRVMPP
CLYGEPSTSVLEAGGYERSNALLGFQGDDTDGSLSHPPESPVLGFALDGR
KIYGPYDSTGTLAGGLDVCNGRWEQQANNTGDGSSGVYVYTYRASPSFPY
LIGCYGPAGTPLDATLAATAAMGIVSESGGYVYSKVDGGFILQVPEDGCP
AGSFLNTESEACEACRAGTYGKDAGIAGRKCPGVCPRGYYCPDGTATPTL
RCPAGTFGAIPGMEHESCSGECQQGYFCLPGSVAPDSNECGSIMFFCPRG
SGQRTPVSNGYYTINVPPEGSPTSLVDAEHSTAAARTRSAEAQCESGTFC
VAGRRRLCPAGTFGATPGLTSPTCSGACPAGNYCPEGTVEPIPCPAGAYG
GEEGLPTQECSGQCASGHYCPAGSVSAFQYACPAGRFGEASGLTDGLCAE
V*
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mRNA from alignment at S-firma_M_contig9459:255..3727-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-firma_M_contig9459.20439.1 ID=mRNA_S-firma_M_contig9459.20439.1|Name=mRNA_S-firma_M_contig9459.20439.1|organism=Sphaerotrichia firma Sfir_13m male|type=mRNA|length=3473bp|location=Sequence derived from alignment at S-firma_M_contig9459:255..3727- (Sphaerotrichia firma Sfir_13m male)
TGCCCACACCCTTTTGCAAACACTTATCTTCTGTATCTCAACGGGCTACT AGATTGGGATCGCAACGGGCGCTGGTTCCTGCGCTTGATTTCCTCTGGAA TCCCGGCCCACGCTTATGGGCAAGGGGAACAGCATTGGGATCACCTCGTC ACGGAACAGCAGTGGGATATGACTATCCCAATCATCTCAGATGAGAACGG AATCGATGTTTTATCCACTCTACAGCGAGATGTGGAGCCGACTGAGTTTC TAGTCGAGGCGGCTCGAGAGGATCGTCCCATTGGCATGGCGGTCAACGGC GTGCCCTTTTTTTCTCCGCTAACGCCAACAGGTGCAATAGATCGTAGAGC GAGTCTCAAAATGATGTTTCACCGCTCTGATACCCCCGCATAATCCGGTC CACATTCTTTGCGCTAGAAGATGCGTAGTTCGCACATTCCAAGGACTGCC GTACGAGTTTCGACGCGCGTTGGCCTTGTGTGCCAAGTATCCGCTAGGCC AAAAAAAAAGTATCGAAGCGATTCATGTTGACGACGCGTGCACAAACGCA GATTCCGCAGGGTCGGAAGGCTTGCGAGATAAACCGAGTCGTTTTGCAAT GGCAACCCGTCCTAGGAGCTGACACGGTAAACCCGCTACCGGGGCAAGTG GCGGAGAACGATACTTTGTTTGATGAGTGCGCGGGCTCGCTGCAGGCAAG CACGGGGGCATATGGATACCGCGTCATGCCTCCGTGTCTATACGGCGAGC CTTCTACCTCTGTTCTTGAGGTAGGCGAGACAGAAAACAACCAGAAAAAC TTTTCCACATGACCTACCGTCCTTTGCAGGAACAGCACTGAGCCTCAGTG TCAAGATAGGAAATACGGAGGGGGGTGGGTGGCGGCGATTGCTTCTGTCT CGAACGACTAACACCGGAGAGCCTTAAAGTCAACACACTGAAACTTCCAC AACTATGCGCTCGCCCGTACGTCCATGTTTCAACAGGCAGGCGGTTACGA GCGGTCGAACGCATTGCTTGGGTTTCAAGGCGACGACACAGACGGGTCGC TGTCACACCCGCCGGAGTCCCCCGTTCTTGGTTTTGCTTTGGACGGCCGA AAAATCTACGGGCCCTACGACTCCACGGGTACCCTGGCGGGGGGATTAGA TGTCTGCAACGGCCGCTGGGAGCAACAGGCCAACAACACCGGCGACGGGA GTAGCGGAGTGTATGTATACACATACCGCGCGTCGCCTTCTTTCCCGTAC CTGATTGGGTGCTATGGTCCAGCGGGAACACCCCTCGACGCCACTTTGGC GGCTACCGCGGCCATGGGAATAGTTTCGGAGAGTGGCGGCTATGTGTATT CCAAGGTCGACGGTGGGTTTATCTTGCAAGTGCCGGAGGACGGCTGCCCG GCTGGAAGCTTCTTGAACACCGAAAGCGAGGCGTGTGAGGCGTGCCGCGC TGGCACGTACGGGAAAGATGCTGGCATTGCAGGACGGAAGTGTCCGGGGG TGAGTTCGCGTCAAACGTCGTGGCCGTCCTTGACATGGCACTTCTACCAA GTTTACGTTGTCTTCTGTCGTCCCAAAGTTGGCTAATACACCCTTCTATC AGTGTACACGCCTTCGATGGCTACTGGGTTGCGAGATTTTGAGTATTTCG GTCGACTTGACCTGGTCCCGTTTGCGGCTCCCCCGTTTTCGTTTACCCTA TGCCCCCCGGACAAAGGTGTGCCCGCGGGGTTACTACTGCCCAGATGGAA CTGCTACGCCCACGCTCAGGTGCCCAGCTGGCACGTTTGGCGCGATTCCG GGAATGGAGCACGAATCATGCAGCGGGGAATGCCAGCAGGGCTACTTTTG CTTGCCCGGGTAGGTCAGAGTTCTCATTGAATCCGAAAGAGGTATGTTGA GCGGCCTGTACACGGTTGGAATGGCTGGAGCAGTGTTGGAGTGCAGCAGC CCCGGCGTTGCACTGCCTAAAGATGGACCAGAGACGAACGTGGCACGTTG GGGCGAGCGTGCGGAGAGGAGCCGAGGCGTTGTCGCCACTCCCCCGAACC AGAAATGTCCAATTGTTTGTTCAGAGTCGGCCGACCCTCGTCCCGCGAAA CCTTCCCTGTGCCTTGGTGACCTTGGTGCCGACGAACCGTATGTATGTAC TCTGCCCTTTTTGGAGTTTGTCCGTCCTTCCAACCTCGTTTCCCCTGTCG CTTCTTTCACTTTCTTCTTCTTCTTCATCGGCACGACAGTTCCGTGGCTC CTGACAGCAACGAGTGTGGGTCAATCATGTTTTTCTGCCCCAGAGGGAGC GGGCAGCGGACCCCAGTGTCGAACGGGTACTACACCATAAATGTTCCTCC AGAAGGATCTCCAACGAGTTTGGTAGACGCGGAGCACTCGACAGCAGCAG CTCGCACGAGGTGACAACTTGGAAGGACTGGATGGGGGCGCGTGCAATGT CGGAGGGGGCGCTTCACGCGACCACGAAACAGCAGAAATGGTTGAATAGC TCTGAACGTGTCAGGCAAGCGTGCAACTCAGCGGCAAGATAGTACAGATG CCCTATCTACAAGATCCTCATCGACTGGCCGAATTCCTCGGCACCATCGG TGGTTGCGTTAAAATCGGTAGCACTTTTGGTGCACCCACAGAAAAATGTT GTTAGTTTATCGGCGCAACGTTTTTAGTTTCCGTGCTCGGCGGCGCGCTC TCCCTCCAAAGGTCTGCCGAAGCGCAGTGCGAATCAGGAACGTTTTGCGT GGCCGGGCGTCGAAGACTGTGCCCCGCGGGCACCTTCGGAGCAACGCCGG GTTTGACATCCCCCACCTGCAGCGGCGCTTGCCCGGCGGGAAACTACTGT CCCGAGGGGACGGTGGAGCCTATTCCTTGCCCCGCCGGCGCATACGGAGG TAAGAGAGCGCTCGCTAGCTAAGAGGGGGCGTGTAATCGTACGTAGGTTG GTACCGTTTTTTGTTCCACTCGTGTGGGCCTCTCGCGACAGTTGATTGGG GAACATTGTACCAGCACGTGTTTTCCCAAGCGGAACTGCCTGCATACAAC ATACAACGCCTGCTTTCGGTCACCCCCCCCCCCCCCAGAAATGGGAATCA CCACGATACGCCCTTCGCACGTTTCGGCCTCAAGGAGTTCCCCTTGTTGG GGTTGACAATCGTAATCGTTCCATAATTGTGGTCCTCATTGTGGTCCTTC TCCTTCTCGCACTAGGGAACAGGTGTGTGTGACGTTTGCCGTTTGGGCAA CCTCACGCCTGTAAATCCAACACGATGGTGAAATCCGGCATATTCACCCC AACAAATACATGTTGTAGGCGAGGAGGGGTTGCCGACTCAGGAGTGTTCG GGGCAATGTGCGTCGGGCCACTACTGCCCCGCGGGAAGCGTGAGCGCGTT TCAATACGCTTGTCCGGCGGGAAGGTTCGGCGAGGCAAGCGGACTCACAG ATGGACTGTGCGCTGAGGTATGA
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Coding sequence (CDS) from alignment at S-firma_M_contig9459:255..3727-

>mRNA_S-firma_M_contig9459.20439.1 ID=mRNA_S-firma_M_contig9459.20439.1|Name=mRNA_S-firma_M_contig9459.20439.1|organism=Sphaerotrichia firma Sfir_13m male|type=CDS|length=3312bp|location=Sequence derived from alignment at S-firma_M_contig9459:255..3727- (Sphaerotrichia firma Sfir_13m male)
TGCCCACACCCTTTTGCAAACACTTATCTTCTGTATCTCAACGGGCTACT
AGATTGGGATCGCAACGGGCGCTGGTTCCTGCGCTTGATTTCCTCTGGAA
TCCCGGCCCACGCTTATGGGCAAGGGGAACAGCATTGGGATCACCTCGTC
ACGGAACAGCAGTGGGATATGACTATCCCAATCATCTCAGATGAGAACGG
AATCGATGTTTTATCCACTCTACAGCGAGATGTGGAGCCGACTGAGTTTC
TAGTCGAGGCGGCTCGAGAGGATCGTCCCATTGGCATGGCGGTCAACGGC
GTGCCCTTTTTTTCTCCGCTAACGCCAACAGTGCCCACACCCTTTTGCAA
ACACTTATCTTCTGTATCTCAACGGGCTACTAGATTGGGATCGCAACGGG
CGCTGGTTCCTGCGCTTGATTTCCTCTGGAATCCCGGCCCACGCTTATGG
GCAAGGGGAACAGCATTGGGATCACCTCGTCACGGAACAGCAGTGGGATA
TGACTATCCCAATCATCTCAGATGAGAACGGAATCGATGTTTTATCCACT
CTACAGCGAGATGTGGAGCCGACTGAGTTTCTAGTCGAGGCGGCTCGAGA
GGATCGTCCCATTGGCATGGCGGTCAACGGCGTGCCCTTTTTTTCTCCGC
TAACGCCAACAGGAGCTGACACGGTAAACCCGCTACCGGGGCAAGTGGCG
GAGAACGATACTTTGTTTGATGAGTGCGCGGGCTCGCTGCAGGCAAGCAC
GGGGGCATATGGATACCGCGTCATGCCTCCGTGTCTATACGGCGAGCCTT
CTACCTCTGTTCTTGAGGAGCTGACACGGTAAACCCGCTACCGGGGCAAG
TGGCGGAGAACGATACTTTGTTTGATGAGTGCGCGGGCTCGCTGCAGGCA
AGCACGGGGGCATATGGATACCGCGTCATGCCTCCGTGTCTATACGGCGA
GCCTTCTACCTCTGTTCTTGAGGCAGGCGGTTACGAGCGGTCGAACGCAT
TGCTTGGGTTTCAAGGCGACGACACAGACGGGTCGCTGTCACACCCGCCG
GAGTCCCCCGTTCTTGGTTTTGCTTTGGACGGCCGAAAAATCTACGGGCC
CTACGACTCCACGGGTACCCTGGCGGGGGGATTAGATGTCTGCAACGGCC
GCTGGGAGCAACAGGCCAACAACACCGGCGACGGGAGTAGCGGAGTGTAT
GTATACACATACCGCGCGTCGCCTTCTTTCCCGTACCTGATTGGGTGCTA
TGGTCCAGCGGGAACACCCCTCGACGCCACTTTGGCGGCTACCGCGGCCA
TGGGAATAGTTTCGGAGAGTGGCGGCTATGTGTATTCCAAGGTCGACGGT
GGGTTTATCTTGCAAGTGCCGGAGGACGGCTGCCCGGCTGGAAGCTTCTT
GAACACCGAAAGCGAGGCGTGTGAGGCGTGCCGCGCTGGCACGTACGGGA
AAGATGCTGGCATTGCAGGACGGAAGTGTCCGGGGGCAGGCGGTTACGAG
CGGTCGAACGCATTGCTTGGGTTTCAAGGCGACGACACAGACGGGTCGCT
GTCACACCCGCCGGAGTCCCCCGTTCTTGGTTTTGCTTTGGACGGCCGAA
AAATCTACGGGCCCTACGACTCCACGGGTACCCTGGCGGGGGGATTAGAT
GTCTGCAACGGCCGCTGGGAGCAACAGGCCAACAACACCGGCGACGGGAG
TAGCGGAGTGTATGTATACACATACCGCGCGTCGCCTTCTTTCCCGTACC
TGATTGGGTGCTATGGTCCAGCGGGAACACCCCTCGACGCCACTTTGGCG
GCTACCGCGGCCATGGGAATAGTTTCGGAGAGTGGCGGCTATGTGTATTC
CAAGGTCGACGGTGGGTTTATCTTGCAAGTGCCGGAGGACGGCTGCCCGG
CTGGAAGCTTCTTGAACACCGAAAGCGAGGCGTGTGAGGCGTGCCGCGCT
GGCACGTACGGGAAAGATGCTGGCATTGCAGGACGGAAGTGTCCGGGGGT
GTGCCCGCGGGGTTACTACTGCCCAGATGGAACTGCTACGCCCACGCTCA
GGTGCCCAGCTGGCACGTTTGGCGCGATTCCGGGAATGGAGCACGAATCA
TGCAGCGGGGAATGCCAGCAGGGCTACTTTTGCTTGCCCGGGTGTGCCCG
CGGGGTTACTACTGCCCAGATGGAACTGCTACGCCCACGCTCAGGTGCCC
AGCTGGCACGTTTGGCGCGATTCCGGGAATGGAGCACGAATCATGCAGCG
GGGAATGCCAGCAGGGCTACTTTTGCTTGCCCGGTTCCGTGGCTCCTGAC
AGCAACGAGTGTGGGTCAATCATGTTTTTCTGCCCCAGAGGGAGCGGGCA
GCGGACCCCAGTGTCGAACGGGTACTACACCATAAATGTTCCTCCAGAAG
GATCTCCAACGAGTTTGGTAGACGCGGAGCACTCGACAGCAGCAGCTCGC
ACGAGTTCCGTGGCTCCTGACAGCAACGAGTGTGGGTCAATCATGTTTTT
CTGCCCCAGAGGGAGCGGGCAGCGGACCCCAGTGTCGAACGGGTACTACA
CCATAAATGTTCCTCCAGAAGGATCTCCAACGAGTTTGGTAGACGCGGAG
CACTCGACAGCAGCAGCTCGCACGAGGTCTGCCGAAGCGCAGTGCGAATC
AGGAACGTTTTGCGTGGCCGGGCGTCGAAGACTGTGCCCCGCGGGCACCT
TCGGAGCAACGCCGGGTTTGACATCCCCCACCTGCAGCGGCGCTTGCCCG
GCGGGAAACTACTGTCCCGAGGGGACGGTGGAGCCTATTCCTTGCCCCGC
CGGCGCATACGGAGGTCTGCCGAAGCGCAGTGCGAATCAGGAACGTTTTG
CGTGGCCGGGCGTCGAAGACTGTGCCCCGCGGGCACCTTCGGAGCAACGC
CGGGTTTGACATCCCCCACCTGCAGCGGCGCTTGCCCGGCGGGAAACTAC
TGTCCCGAGGGGACGGTGGAGCCTATTCCTTGCCCCGCCGGCGCATACGG
AGGCGAGGAGGGGTTGCCGACTCAGGAGTGTTCGGGGCAATGTGCGTCGG
GCCACTACTGCCCCGCGGGAAGCGTGAGCGCGTTTCAATACGCTTGTCCG
GCGGGAAGGTTCGGCGAGGCAAGCGGACTCACAGATGGACTGTGCGCTGA
GGTATGAGCGAGGAGGGGTTGCCGACTCAGGAGTGTTCGGGGCAATGTGC
GTCGGGCCACTACTGCCCCGCGGGAAGCGTGAGCGCGTTTCAATACGCTT
GTCCGGCGGGAAGGTTCGGCGAGGCAAGCGGACTCACAGATGGACTGTGC
GCTGAGGTATGA
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