mRNA_S-firma_M_contig9433.20420.1 (mRNA) Sphaerotrichia firma Sfir_13m male
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Overview
Homology
BLAST of mRNA_S-firma_M_contig9433.20420.1 vs. uniprot
Match: D7FZS8_ECTSI (Trimethylguanosine synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZS8_ECTSI) HSP 1 Score: 280 bits (715), Expect = 3.930e-94 Identity = 142/175 (81.14%), Postives = 155/175 (88.57%), Query Frame = 1
Query: 1 MTPKLRNRLQFDEESLWSITDQNTADEMSNIALLLPGVTASTAIVDGTACVGGNAISFVSAFDEVWAVEINPDRFELLKGNVKKSIAKSAHKPKTVRFFNANFLDVLDTEKGAIGAKRPVVFIDPPWGGEAYKKK-VQQYRMHFGLVDLFLSDTPMVEVCRRAANAGARHVLLKV 522
M+PK RNRL+FDEESLWSITDQNTADEM+ IALLLPGV+ASTAIVDGTACVGGNAISFVSAFDEVWAVEI+PDRF+LLKGNVKK+IA+SAHK KTVRFFNA+FL VL+TE+G I KRP+VFIDPPWGGE YKKK GLVDL LSDTPMV+VC RAA AGARHVLLKV
Sbjct: 1 MSPKRRNRLRFDEESLWSITDQNTADEMTKIALLLPGVSASTAIVDGTACVGGNAISFVSAFDEVWAVEIDPDRFDLLKGNVKKAIARSAHKEKTVRFFNADFLRVLETERGGIAEKRPIVFIDPPWGGEEYKKKGXXXXXXXXGLVDLSLSDTPMVDVCGRAAKAGARHVLLKV 175
BLAST of mRNA_S-firma_M_contig9433.20420.1 vs. uniprot
Match: A0A6H5KL59_9PHAE (Trimethylguanosine synthase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL59_9PHAE) HSP 1 Score: 278 bits (712), Expect = 2.330e-85 Identity = 141/174 (81.03%), Postives = 154/174 (88.51%), Query Frame = 1
Query: 1 MTPKLRNRLQFDEESLWSITDQNTADEMSNIALLLPGVTASTAIVDGTACVGGNAISFVSAFDEVWAVEINPDRFELLKGNVKKSIAKSAHKPKTVRFFNANFLDVLDTEKGAIGAKRPVVFIDPPWGGEAYKKKVQQYRMHFGLVDLFLSDTPMVEVCRRAANAGARHVLLKV 522
M+PK RNRL+FDEESLWSITDQNTADEM+ IALLLPGV+ASTAIVDGTACVGGNAISF SAFDEVWAVEI+PDRF+LLKGNVKK+IA+SAHK KTVRFFNA+FL VL+TE+G I KRP+VFIDPPWGGE YKKK GLVDL LSDTPMV+VC RAA AGARHVLLKV
Sbjct: 364 MSPKRRNRLRFDEESLWSITDQNTADEMTKIALLLPGVSASTAIVDGTACVGGNAISFASAFDEVWAVEIDPDRFDLLKGNVKKAIARSAHKEKTVRFFNADFLQVLETERGGITEKRPIVFIDPPWGGEEYKKK--------GLVDLSLSDTPMVDVCGRAAKAGARHVLLKV 529
BLAST of mRNA_S-firma_M_contig9433.20420.1 vs. uniprot
Match: A0A835YTB6_9STRA (Trimethylguanosine synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTB6_9STRA) HSP 1 Score: 100 bits (249), Expect = 2.140e-21 Identity = 51/85 (60.00%), Postives = 65/85 (76.47%), Query Frame = 1
Query: 1 MTPKLRNRLQFDEESLWSITDQNTADEMSNIALLLPGVTASTAIVDGTACVGGNAISFVS--AFDEVWAVEINPDRFELLKGNVK 249
M + R+RLQFD SL+S+TDQ TAD+++ I L LPGV +T I+DGTACVGGN ISF S F +VWAVE++P R++LLK NVK
Sbjct: 860 MDAQRRHRLQFDATSLYSVTDQRTADQITEILLGLPGVDTATPIIDGTACVGGNVISFASHGQFQQVWAVELDPTRYKLLKHNVK 944
BLAST of mRNA_S-firma_M_contig9433.20420.1 vs. uniprot
Match: A0A6C0IY53_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0IY53_9ZZZZ) HSP 1 Score: 88.6 bits (218), Expect = 1.400e-18 Identity = 59/170 (34.71%), Postives = 93/170 (54.71%), Query Frame = 1
Query: 19 NRLQFDEESLWSITDQNTADEMSNIALLLP--GVTASTAIVDGTACVGGNAISFVSAFDEVWAVEINPDRFELLKGNVKKSIAKSAHKPKTVRFFNANFLDVLDTEKGAIGAKRPVVFIDPPWGGEAYKKKVQQYRMHFGLVDLFLSDTPMVEVCRRAANAGARHVLLKV 522
N+L++D+E LWSI+ N ADE+S L G+ +T I+D TA +GGN ISF S F++V +VE + +RF+LLK N++ + + N +FL +L+ I + VVF+DPPWGG YK +++ +S+T + +VC N +K+
Sbjct: 21 NKLKYDQEGLWSISRPNDADEISKKIKLFEKTGIIINT-ILDSTAGLGGNTISFASYFNKVISVEYDKERFKLLKSNIENYTYNN------IVLHNFDFLQLLEQ----INEQIDVVFVDPPWGGPNYKFDDN--------LNIEISNTSLSDVCVLLDNYSFNENKIKI 171
BLAST of mRNA_S-firma_M_contig9433.20420.1 vs. uniprot
Match: A0A3M6V8A2_9STRA (Trimethylguanosine synthase n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6V8A2_9STRA) HSP 1 Score: 91.7 bits (226), Expect = 2.190e-18 Identity = 66/196 (33.67%), Postives = 96/196 (48.98%), Query Frame = 1
Query: 10 KLRNRLQFDEESLWSITDQNTADEMSNIALLL------------------PGVTA-------STAIVDGTACVGGNAISFVSAFDEVWAVEINPDRFELLKGNVKKSIAKSAHKPKTVRFFNANFLDVLDTEKGAIGAKRPVVFIDPPWGGEAYKKKVQQYRMHFGLVDLFLSDTPMVEVCRRAANAGARHVLLKV 522
+LRN+LQ DE + +S+TD A ++S L L G TA + DGTAC+GGN +SF F V A+E N R ++L+ N++ K V+ +AN+LDV+ + ++ VVF+DPPWGG YK VDLFL D P+ E+C R + + ++LKV
Sbjct: 333 ELRNQLQVDEVAEFSVTDFEMATKISQAVLDLFAPLKEDTTSESGNEDHEDGCTAIQERKKYPLVVTDGTACIGGNVLSFCDFFMHVNAIENNATRVQMLRHNLQ------VLKKTNVKCIHANYLDVM------LELQQDVVFLDPPWGGPEYKD--------LNKVDLFLGDVPLHEICTRL-QSSTKCIILKV 507
BLAST of mRNA_S-firma_M_contig9433.20420.1 vs. uniprot
Match: A0A3F2RVX0_9STRA (Trimethylguanosine synthase n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RVX0_9STRA) HSP 1 Score: 85.5 bits (210), Expect = 5.720e-17 Identity = 68/202 (33.66%), Postives = 97/202 (48.02%), Query Frame = 1
Query: 10 KLRNRLQFDEESLWSITDQNTADEMSNIAL------------------------LLPG----VTASTAIVDGTACVGGNAISFVSAFDEVWAVEINPDRFELLKGNVK---KSIAKSAHKPKTVRFFNANFLDVLDTEKGAIGAKRPVVFIDPPWGGEAYKKKVQQYRMHFGLVDLFLSDTPMVEVCRRAANAGARHVLLKV 522
++RN+LQ DE + +S+TD A ++S L L P V + DGTACVGGN +SF F V AVE + R ++L+ N++ K+ AK H A++LDV+ +G ++ VVF+DPPWGG YK + VDLFL P+ E+C R A+ V+LKV
Sbjct: 59 EIRNQLQVDEVAEFSVTDFEMATKISEAVLGLFDPPKDDDGLEDGNEKHERGEELSPSPVERVKYPLVVTDGTACVGGNVLSFCDFFTHVNAVENDATRVQMLQHNLQVLSKTNAKCIH---------ASYLDVM------LGLQQDVVFLDPPWGGPEYKDLER--------VDLFLGGVPLHEICTRLQGT-AKCVVLKV 236
BLAST of mRNA_S-firma_M_contig9433.20420.1 vs. uniprot
Match: H3GCR9_PHYRM (Trimethylguanosine synthase n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GCR9_PHYRM) HSP 1 Score: 87.0 bits (214), Expect = 6.020e-17 Identity = 53/134 (39.55%), Postives = 75/134 (55.97%), Query Frame = 1
Query: 130 IVDGTACVGGNAISFVSAFDEVWAVEINPDRFELLKGNVK---KSIAKSAHKPKTVRFFNANFLDVLDTEKGAIGAKRPVVFIDPPWGGEAYKKKVQQYRMHFGLVDLFLSDTPMVEVCRRAANAGARHVLLKV 522
+ DGTACVGGN +SF F V A+E +P R ++L+ N++ K+ KS H AN+LDV+ + ++ VVF+DPPWGG YK + VDLFL D P+ E+C R A+ ++LKV
Sbjct: 292 VTDGTACVGGNVLSFCDFFTHVNAIENDPTRVQMLRHNLQVLQKTNVKSIH---------ANYLDVM------LKLQQDVVFLDPPWGGPEYKDLAK--------VDLFLGDLPLHEICTRL-QGSAKCIVLKV 401
BLAST of mRNA_S-firma_M_contig9433.20420.1 vs. uniprot
Match: H3GCS0_PHYRM (Trimethylguanosine synthase n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GCS0_PHYRM) HSP 1 Score: 87.0 bits (214), Expect = 1.110e-16 Identity = 53/134 (39.55%), Postives = 75/134 (55.97%), Query Frame = 1
Query: 130 IVDGTACVGGNAISFVSAFDEVWAVEINPDRFELLKGNVK---KSIAKSAHKPKTVRFFNANFLDVLDTEKGAIGAKRPVVFIDPPWGGEAYKKKVQQYRMHFGLVDLFLSDTPMVEVCRRAANAGARHVLLKV 522
+ DGTACVGGN +SF F V A+E +P R ++L+ N++ K+ KS H AN+LDV+ + ++ VVF+DPPWGG YK + VDLFL D P+ E+C R A+ ++LKV
Sbjct: 292 VTDGTACVGGNVLSFCDFFTHVNAIENDPTRVQMLRHNLQVLQKTNVKSIH---------ANYLDVM------LKLQQDVVFLDPPWGGPEYKDLAK--------VDLFLGDLPLHEICTRL-QGSAKCIVLKV 401
BLAST of mRNA_S-firma_M_contig9433.20420.1 vs. uniprot
Match: A0A6C0DCL1_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0DCL1_9ZZZZ) HSP 1 Score: 82.8 bits (203), Expect = 1.370e-16 Identity = 46/127 (36.22%), Postives = 72/127 (56.69%), Query Frame = 1
Query: 22 RLQFDEESLWSITDQNTADEMSNIALLLPGVTASTAIVDGTACVGGNAISFVSAFDEVWAVEINPDRFELLKGNVKKSIAKSAHKPKTVRFFNANFLDVLDTEKGAIGAKRPVVFIDPPWGGEAYKK 402
+LQ+D E L+SIT+ AD++SNI + + + I+DGT +GGN ISF F +V ++E+N +RF +LK N+ S + ++ FN + ++ + K + F DPPWGG YKK
Sbjct: 13 KLQYDNEGLYSITNYTEADQISNIIVNMFTDIKNLCILDGTGGIGGNTISFSKYFSKVTSIELNKERFIMLKNNI------SNYNITNIKLFNVDSVEYVFNNYN----KYNIYFFDPPWGGPDYKK 129
BLAST of mRNA_S-firma_M_contig9433.20420.1 vs. uniprot
Match: A0A484E7N2_BRELC (Trimethylguanosine synthase n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E7N2_BRELC) HSP 1 Score: 86.3 bits (212), Expect = 1.660e-16 Identity = 64/196 (32.65%), Postives = 100/196 (51.02%), Query Frame = 1
Query: 10 KLRNRLQFDEESLWSITDQNTADEMSNIALLL-----PGVTASTA--------------------IVDGTACVGGNAISFVSAFDEVWAVEINPDRFELLKGNVKKSIAKSAHKPKTVRFFNANFLDVLDTEKGAIGAKRPVVFIDPPWGGEAYKKKVQQYRMHFGLVDLFLSDTPMVEVCRRAANAGARHVLLKV 522
+LRN+LQ D+ + +S+TD A ++S++ L L G+ A + + DGTACVGGN +SF F V A+E + R ++L+ N++ + K+ V+ +AN+LDV+ + K+ VVF+DPPWGG YK + VDLFL P+ E+C R + ++LKV
Sbjct: 324 ELRNQLQVDKVAEFSVTDFEMATKISHVVLNLFVPFQGGIVAESGDTAHEDSNMINSERAKHPLIVTDGTACVGGNVLSFCDFFAHVNAIENDFSRVQMLQHNLQV-LQKT-----NVKCIHANYLDVM------LQLKQDVVFLDPPWGGPEYKDLER--------VDLFLGGQPLHEICSRL-QGSTKCIVLKV 498 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig9433.20420.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_M_contig9433.20420.1 >prot_S-firma_M_contig9433.20420.1 ID=prot_S-firma_M_contig9433.20420.1|Name=mRNA_S-firma_M_contig9433.20420.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=174bp MTPKLRNRLQFDEESLWSITDQNTADEMSNIALLLPGVTASTAIVDGTACback to top mRNA from alignment at S-firma_M_contig9433:2035..3916+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_M_contig9433.20420.1 ID=mRNA_S-firma_M_contig9433.20420.1|Name=mRNA_S-firma_M_contig9433.20420.1|organism=Sphaerotrichia firma Sfir_13m male|type=mRNA|length=1882bp|location=Sequence derived from alignment at S-firma_M_contig9433:2035..3916+ (Sphaerotrichia firma Sfir_13m male)back to top Coding sequence (CDS) from alignment at S-firma_M_contig9433:2035..3916+ >mRNA_S-firma_M_contig9433.20420.1 ID=mRNA_S-firma_M_contig9433.20420.1|Name=mRNA_S-firma_M_contig9433.20420.1|organism=Sphaerotrichia firma Sfir_13m male|type=CDS|length=1044bp|location=Sequence derived from alignment at S-firma_M_contig9433:2035..3916+ (Sphaerotrichia firma Sfir_13m male)back to top |