mRNA_S-firma_M_contig943.20413.1 (mRNA) Sphaerotrichia firma Sfir_13m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-firma_M_contig943.20413.1
Unique NamemRNA_S-firma_M_contig943.20413.1
TypemRNA
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Homology
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BLAST of mRNA_S-firma_M_contig943.20413.1 vs. uniprot
Match: D8LAX5_ECTSI (Nfu_N domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LAX5_ECTSI)

HSP 1 Score: 293 bits (751), Expect = 3.540e-93
Identity = 161/209 (77.03%), Postives = 170/209 (81.34%), Query Frame = 1 
Query:   73 SRIAAESLGTQASTAF---PAQTRRLHVLLSGNSSAAALPASQL--SQHPRNRAPWLSQQSRSFFIQTEPTPNPNSLKFLPGRPVLPPDHGTGVYFTPDDREKSQSPLAVALLGLEGVTGVFLGTDFITISKTDEGGWALMKPVVFGEIMDFFAEGKPVMLAEPVVTDTTILDDDDEVVAMIKELLQERVRQRGWPVLERETGKTAQRG 684
            SR AAESLGTQA  A     AQTRR  V  S  S+++A     L    HPR+R+PWLSQQSRSFFIQTEPTPNPNSLKFLPGRPVLP +HGTGVYFTPDDREKSQSPLAVALL LEGV GVFLGTDFITISK DEGGW LMKPVVFGEIMDFFAEGKPVMLAEPVVTDTTILDDDDEVVAMIKELLQERVR    P ++ + G    RG
Sbjct:    2 SRTAAESLGTQARPALGGAAAQTRRFQVAASSASTSSAATERPLLGRNHPRSRSPWLSQQSRSFFIQTEPTPNPNSLKFLPGRPVLPAEHGTGVYFTPDDREKSQSPLAVALLSLEGVAGVFLGTDFITISKHDEGGWTLMKPVVFGEIMDFFAEGKPVMLAEPVVTDTTILDDDDEVVAMIKELLQERVR----PAVQEDGGDIFYRG 206
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BLAST of mRNA_S-firma_M_contig943.20413.1 vs. uniprot
Match: A0A7S2BTZ1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BTZ1_9STRA)

HSP 1 Score: 157 bits (398), Expect = 1.760e-41
Identity = 80/130 (61.54%), Postives = 97/130 (74.62%), Query Frame = 1 
Query:  241 RSFFIQTEPTPNPNSLKFLPGRPVLPPDHGTGVYFTPDDREKSQSPLAVALLGLEGVTGVFLGTDFITISKTDEGGWALMKPVVFGEIMDFFAEGKPVMLAEPVVTDTTILDDDDEVVAMIKELLQERVR 630
            RS FIQTE TPNP+SLKFLPG  VLPP +G+G++    +R+  +SPLAV L  LEGVT VFLG DFITI+K     W  +KP +F  IMD +AEG  +M  EP V+DTTILDDDDE+VAMIKELL+ R+R
Sbjct:   32 RSMFIQTENTPNPSSLKFLPGVEVLPPIYGSGMFLQKGERDYQRSPLAVRLFTLEGVTAVFLGNDFITITKDKTEDWTPLKPQIFSIIMDAYAEGIEIMTEEPEVSDTTILDDDDEIVAMIKELLETRIR 161
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BLAST of mRNA_S-firma_M_contig943.20413.1 vs. uniprot
Match: A0A1V9Y986_9STRA (Iron-sulfur cluster scaffold protein Nfu-like protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Y986_9STRA)

HSP 1 Score: 156 bits (395), Expect = 1.200e-40
Identity = 85/161 (52.80%), Postives = 109/161 (67.70%), Query Frame = 1 
Query:  238 SRSFFIQTEPTPNPNSLKFLPGRPVLPPDHGTGVYFTPDDREKSQSPLAVALLGLEGVTGVFLGTDFITISKTDEGGWALMKPVVFGEIMDFFAEGKPVMLAEPVVTDTTILDDDDEVVAMIKELLQERVRQRGWPVLERETGKTAQRGGCLETRRIVARL 720
            +RS FIQTE TPNP+S+KFLPGR VL     TGV FTP   E  QS LA  L  + GVT VF G DFI+++KT++  W L++  +F  IMDF+A GKPVM  +P++TDTTILDDDDEVVAMIKELL+ R+R    P ++ + G    +G   ET  +  +L
Sbjct:   48 ARSMFIQTENTPNPHSIKFLPGRAVLDERFTTGVDFTPKSPEVRQSLLAKELFTIHGVTRVFFGKDFISVTKTEDEDWDLLRGQIFATIMDFYASGKPVMSDKPIITDTTILDDDDEVVAMIKELLETRIR----PAVQDDGGDIFYKGFDEETGIVTVQL 204
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BLAST of mRNA_S-firma_M_contig943.20413.1 vs. uniprot
Match: A0A1V9Y8Q5_9STRA (Iron-sulfur cluster scaffold protein Nfu n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Y8Q5_9STRA)

HSP 1 Score: 156 bits (394), Expect = 5.360e-40
Identity = 84/154 (54.55%), Postives = 106/154 (68.83%), Query Frame = 1 
Query:  238 SRSFFIQTEPTPNPNSLKFLPGRPVLPPDHGTGVYFTPDDREKSQSPLAVALLGLEGVTGVFLGTDFITISKTDEGGWALMKPVVFGEIMDFFAEGKPVMLAEPVVTDTTILDDDDEVVAMIKELLQERVRQRGWPVLERETGKTAQRGGCLET 699
            SRS FIQTE TPNP+S+KFLPGRPVL     TGV FTP   E  QS LA  L  ++GV  VF G DF++I+K ++  W +++  +F  IMDF+A GKPVML +P +TDTTILDDDDEVVAMIKELL+ R+R    P ++ + G    +G   ET
Sbjct:   94 SRSMFIQTESTPNPHSIKFLPGRPVLDERFTTGVDFTPKAPEVRQSELARELFKIDGVNRVFFGKDFVSITKDEDEDWEMLRGQIFATIMDFYATGKPVMLDKPEITDTTILDDDDEVVAMIKELLETRIR----PAVQDDGGDIFYKGFDEET 243
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BLAST of mRNA_S-firma_M_contig943.20413.1 vs. uniprot
Match: W2QTC7_PHYPN (Nfu_N domain-containing protein n=12 Tax=Phytophthora TaxID=4783 RepID=W2QTC7_PHYPN)

HSP 1 Score: 154 bits (389), Expect = 1.410e-39
Identity = 88/169 (52.07%), Postives = 110/169 (65.09%), Query Frame = 1 
Query:  130 TRRLHVLLSGNSSAAALPASQLSQHPRNRAPWLSQQS--RSFFIQTEPTPNPNSLKFLPGRPVLPPDHGTGVYFTPDDREKSQSPLAVALLGLEGVTGVFLGTDFITISKTDEGGWALMKPVVFGEIMDFFAEGKPVMLAEPVVTDTTILDDDDEVVAMIKELLQERVR 630
            TR +H       +AAAL         R  +P+L++    RS FIQTEPTPNP S+KFLPGR VL     TGV FTP   E  +SPLA  L  +EGVT VF G DFI+++KT++  W  +   +F  IMDFFA  + VM  EP++TDTTIL DDDEVVAMIKELL++R+R
Sbjct:   35 TRFVHAHPVAGRAAAAL-------QTRATSPFLARNGALRSMFIQTEPTPNPLSVKFLPGRTVLDDRFTTGVDFTPSSEEVRRSPLAKKLFQIEGVTRVFFGKDFISVTKTEDEDWDALNAEIFATIMDFFASDEQVMSDEPIITDTTILPDDDEVVAMIKELLEQRIR 196
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BLAST of mRNA_S-firma_M_contig943.20413.1 vs. uniprot
Match: A0A067CVC8_SAPPC (Nfu_N domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CVC8_SAPPC)

HSP 1 Score: 154 bits (388), Expect = 1.430e-39
Identity = 78/131 (59.54%), Postives = 96/131 (73.28%), Query Frame = 1 
Query:  238 SRSFFIQTEPTPNPNSLKFLPGRPVLPPDHGTGVYFTPDDREKSQSPLAVALLGLEGVTGVFLGTDFITISKTDEGGWALMKPVVFGEIMDFFAEGKPVMLAEPVVTDTTILDDDDEVVAMIKELLQERVR 630
            SRS FIQTE TPNP+S+KFLPGR VL     TGV FTP   E  QS LA  L  + GVT VF   DFI+++KT++  W L++  +F  IMDF+A GKP+M  +P++TDTTILDDDDEVVAMIKELL+ R+R
Sbjct:   50 SRSMFIQTENTPNPHSIKFLPGRAVLDERFTTGVDFTPKSPEVRQSLLAKELFTIHGVTRVFFSKDFISVTKTEDEDWDLLRGQIFATIMDFYATGKPIMSDQPIITDTTILDDDDEVVAMIKELLETRIR 180
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BLAST of mRNA_S-firma_M_contig943.20413.1 vs. uniprot
Match: K3WMX0_GLOUD (Nfu_N domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WMX0_GLOUD)

HSP 1 Score: 154 bits (388), Expect = 2.010e-39
Identity = 78/131 (59.54%), Postives = 95/131 (72.52%), Query Frame = 1 
Query:  238 SRSFFIQTEPTPNPNSLKFLPGRPVLPPDHGTGVYFTPDDREKSQSPLAVALLGLEGVTGVFLGTDFITISKTDEGGWALMKPVVFGEIMDFFAEGKPVMLAEPVVTDTTILDDDDEVVAMIKELLQERVR 630
            +RS FIQTEPTPNP S+KFLPG  VL     TGV FTP   E  +SPLA  L  +EGVT VF G DFI+++K ++  W  +K  +F  IMDF+A G+ VM  EPV+TDTTIL DDDEVVAMIKELL++R+R
Sbjct:   67 ARSMFIQTEPTPNPQSVKFLPGEVVLDDRFSTGVDFTPGSEEMRRSPLAKKLFQIEGVTRVFFGKDFISVTKDEDIDWDALKAEIFATIMDFYATGEDVMSDEPVITDTTILPDDDEVVAMIKELLEQRIR 197
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BLAST of mRNA_S-firma_M_contig943.20413.1 vs. uniprot
Match: A0A662XYG1_9STRA (Nfu_N domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XYG1_9STRA)

HSP 1 Score: 153 bits (387), Expect = 2.100e-39
Identity = 93/189 (49.21%), Postives = 120/189 (63.49%), Query Frame = 1 
Query:   73 SRIAAESLGTQASTAFPAQTRRLHV-LLSGNSSAAALPASQLSQHPRNRAPWLSQQS--RSFFIQTEPTPNPNSLKFLPGRPVLPPDHGTGVYFTPDDREKSQSPLAVALLGLEGVTGVFLGTDFITISKTDEGGWALMKPVVFGEIMDFFAEGKPVMLAEPVVTDTTILDDDDEVVAMIKELLQERVR 630
            SR+   +L  + + A  A TR +HV  L+G  S++A  A      PR  +P+ +     RS FIQTEPTPNP S+KFLPGR VL     TGV FTP   E  +SPLA  L  +EGV  VF G DFI+++KT++  W  +   +F  IMDFFA  + VM  EPV+TDTTIL +DDEVV MIKELL++R+R
Sbjct:    5 SRLILRALARRGAAA-SAATRSMHVHRLAGRVSSSAALA------PRALSPFAAHGGARRSMFIQTEPTPNPQSVKFLPGRAVLDDRFSTGVDFTPGSEEVRRSPLAKKLFQIEGVVRVFFGKDFISVTKTEDEDWDALNAEIFATIMDFFASEEEVMSDEPVITDTTILPEDDEVVVMIKELLEQRIR 186
[Close]
BLAST of mRNA_S-firma_M_contig943.20413.1 vs. uniprot
Match: A0A3M6VUW5_9STRA (Nfu_N domain-containing protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VUW5_9STRA)

HSP 1 Score: 152 bits (384), Expect = 5.670e-39
Identity = 84/166 (50.60%), Postives = 109/166 (65.66%), Query Frame = 1 
Query:  133 RRLHVLLSGNSSAAALPASQLSQHPRNRAPWLSQQSRSFFIQTEPTPNPNSLKFLPGRPVLPPDHGTGVYFTPDDREKSQSPLAVALLGLEGVTGVFLGTDFITISKTDEGGWALMKPVVFGEIMDFFAEGKPVMLAEPVVTDTTILDDDDEVVAMIKELLQERVR 630
            R LH     +S++AA+ +   S     R  W     RS FIQTEPTPNP S+KFLPGR +L     TGV FTP+  E  +SPLA  L  +EG+T VF G DFI+++K ++  W  +   +F  +MDFFA G+ VM  EP++TDTTIL DDDEVVAMIKELL++R+R
Sbjct:   26 RFLHAPSLIHSASAAVKSRINSPFSARRGAW-----RSMFIQTEPTPNPQSVKFLPGRVLLDDRFTTGVDFTPNSDEIRRSPLAKKLFQIEGITRVFFGKDFISVTKIEDEDWDALNAEIFATMMDFFASGENVMSDEPIITDTTILPDDDEVVAMIKELLEQRIR 186
[Close]
BLAST of mRNA_S-firma_M_contig943.20413.1 vs. uniprot
Match: A0A0P1ARC0_PLAHL (Iron-sulfur cluster scaffold protein nfu-like protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1ARC0_PLAHL)

HSP 1 Score: 150 bits (379), Expect = 2.740e-38
Identity = 78/130 (60.00%), Postives = 92/130 (70.77%), Query Frame = 1 
Query:  241 RSFFIQTEPTPNPNSLKFLPGRPVLPPDHGTGVYFTPDDREKSQSPLAVALLGLEGVTGVFLGTDFITISKTDEGGWALMKPVVFGEIMDFFAEGKPVMLAEPVVTDTTILDDDDEVVAMIKELLQERVR 630
            RS FIQTE TPNP S+KFLPGR VL     TGV FTP   E  +SPLA  L  +EGV+ VF G DFI+I+K D+  W  +   +F  IMDFFA  + VM  EPV+TDTTIL DDDEVVAMIKELL++R+R
Sbjct:   54 RSMFIQTESTPNPQSVKFLPGRAVLDDRFTTGVDFTPSSEEVRRSPLAKKLFQIEGVSRVFFGKDFISITKLDDEDWDALNAEIFATIMDFFASNEEVMSDEPVITDTTILPDDDEVVAMIKELLEQRIR 183
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig943.20413.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LAX5_ECTSI3.540e-9377.03Nfu_N domain-containing protein n=2 Tax=Ectocarpus... [more]
A0A7S2BTZ1_9STRA1.760e-4161.54Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
A0A1V9Y986_9STRA1.200e-4052.80Iron-sulfur cluster scaffold protein Nfu-like prot... [more]
A0A1V9Y8Q5_9STRA5.360e-4054.55Iron-sulfur cluster scaffold protein Nfu n=1 Tax=T... [more]
W2QTC7_PHYPN1.410e-3952.07Nfu_N domain-containing protein n=12 Tax=Phytophth... [more]
A0A067CVC8_SAPPC1.430e-3959.54Nfu_N domain-containing protein n=2 Tax=Saprolegni... [more]
K3WMX0_GLOUD2.010e-3959.54Nfu_N domain-containing protein n=1 Tax=Globispora... [more]
A0A662XYG1_9STRA2.100e-3949.21Nfu_N domain-containing protein n=2 Tax=Nothophyto... [more]
A0A3M6VUW5_9STRA5.670e-3950.60Nfu_N domain-containing protein n=2 Tax=Peronospor... [more]
A0A0P1ARC0_PLAHL2.740e-3860.00Iron-sulfur cluster scaffold protein nfu-like prot... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig943contigS-firma_M_contig943:18138..21105 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-19
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score299.3
Seed ortholog evalue2e-78
Seed eggNOG ortholog2880.D8LAX5
Preferred nameNFU4
KEGG koko:K22074
GOsGO:0000166,GO:0003674,GO:0005198,GO:0005488,GO:0005507,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0006790,GO:0006807,GO:0006873,GO:0006875,GO:0006879,GO:0006880,GO:0008144,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016043,GO:0016226,GO:0017076,GO:0019538,GO:0019725,GO:0022607,GO:0030003,GO:0030554,GO:0031163,GO:0031974,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0042592,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044085,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0046872,GO:0046914,GO:0046916,GO:0048878,GO:0050801,GO:0051179,GO:0051186,GO:0051235,GO:0051238,GO:0051604,GO:0051641,GO:0051651,GO:0055065,GO:0055072,GO:0055076,GO:0055080,GO:0055082,GO:0065007,GO:0065008,GO:0070013,GO:0071704,GO:0071840,GO:0097159,GO:0097367,GO:0097428,GO:0097577,GO:0098771,GO:0106035,GO:1901265,GO:1901363,GO:1901564
EggNOG free text desc.NFU1 iron-sulfur cluster scaffold
EggNOG OGsCOG0694@1,KOG2358@2759
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03029
Hectar predicted targeting categorymitochondrion
Ec32 ortholog descriptionScaffold protein Nfu/NifU, N-terminal
Ec32 orthologEc-27_006080.1
Exons4
Model size1496
Cds size894
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig943.20413.1prot_S-firma_M_contig943.20413.1Sphaerotrichia firma Sfir_13m malepolypeptideS-firma_M_contig943 18159..20524 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622828776.4127336-UTR-S-firma_M_contig943:18137..181581622828776.4127336-UTR-S-firma_M_contig943:18137..18158Sphaerotrichia firma Sfir_13m maleUTRS-firma_M_contig943 18138..18158 +
1697105155.5153992-UTR-S-firma_M_contig943:18137..181581697105155.5153992-UTR-S-firma_M_contig943:18137..18158Sphaerotrichia firma Sfir_13m maleUTRS-firma_M_contig943 18138..18158 +
1622828776.483214-UTR-S-firma_M_contig943:20524..211051622828776.483214-UTR-S-firma_M_contig943:20524..21105Sphaerotrichia firma Sfir_13m maleUTRS-firma_M_contig943 20525..21105 +
1697105155.6084874-UTR-S-firma_M_contig943:20524..211051697105155.6084874-UTR-S-firma_M_contig943:20524..21105Sphaerotrichia firma Sfir_13m maleUTRS-firma_M_contig943 20525..21105 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622828776.4280856-CDS-S-firma_M_contig943:18158..183541622828776.4280856-CDS-S-firma_M_contig943:18158..18354Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig943 18159..18354 +
1697105155.5591497-CDS-S-firma_M_contig943:18158..183541697105155.5591497-CDS-S-firma_M_contig943:18158..18354Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig943 18159..18354 +
1622828776.4419198-CDS-S-firma_M_contig943:18697..188481622828776.4419198-CDS-S-firma_M_contig943:18697..18848Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig943 18698..18848 +
1697105155.5758667-CDS-S-firma_M_contig943:18697..188481697105155.5758667-CDS-S-firma_M_contig943:18697..18848Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig943 18698..18848 +
1622828776.455819-CDS-S-firma_M_contig943:19652..197371622828776.455819-CDS-S-firma_M_contig943:19652..19737Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig943 19653..19737 +
1697105155.5873067-CDS-S-firma_M_contig943:19652..197371697105155.5873067-CDS-S-firma_M_contig943:19652..19737Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig943 19653..19737 +
1622828776.4701161-CDS-S-firma_M_contig943:20062..205241622828776.4701161-CDS-S-firma_M_contig943:20062..20524Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig943 20063..20524 +
1697105155.6001163-CDS-S-firma_M_contig943:20062..205241697105155.6001163-CDS-S-firma_M_contig943:20062..20524Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig943 20063..20524 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-firma_M_contig943.20413.1

>prot_S-firma_M_contig943.20413.1 ID=prot_S-firma_M_contig943.20413.1|Name=mRNA_S-firma_M_contig943.20413.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=298bp
MATMSRSLGPRALRPLWSRIAAESLGTQASTAFPAQTRRLHVLLSGNSSA
AALPASQLSQHPRNRAPWLSQQSRSFFIQTEPTPNPNSLKFLPGRPVLPP
DHGTGVYFTPDDREKSQSPLAVALLGLEGVTGVFLGTDFITISKTDEGGW
ALMKPVVFGEIMDFFAEGKPVMLAEPVVTDTTILDDDDEVVAMIKELLQE
RVRQRGWPVLERETGKTAQRGGCLETRRIVARLLSCDHTGMLVHARASRE
STASEGFDVVALDLLARNGYALPVGWCKGSTVSPFAPRLAVRVASSL*
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mRNA from alignment at S-firma_M_contig943:18138..21105+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-firma_M_contig943.20413.1 ID=mRNA_S-firma_M_contig943.20413.1|Name=mRNA_S-firma_M_contig943.20413.1|organism=Sphaerotrichia firma Sfir_13m male|type=mRNA|length=2968bp|location=Sequence derived from alignment at S-firma_M_contig943:18138..21105+ (Sphaerotrichia firma Sfir_13m male)
GACCTGGTGAGTACGTAGAGCATGGCTACCATGTCAAGATCTCTCGGGCC
TCGCGCACTGCGACCGCTGTGGTCAAGAATCGCTGCAGAGTCCTTGGGAA
CGCAAGCCAGTACCGCGTTCCCAGCACAAACTCGCCGCCTGCACGTTCTC
TTATCCGGCAACTCGTCAGCAGCCGCCCTGCCGGCGTCTCAACTGAGCCA
ACATCCCAGAAATCGTGGTAAGCCCGCTGCTATTGCTGGGGAGAGTGGTG
TATGGTTTGCCGGAATTGCGCAGAAGGAAATTGTGAGCTTTGTGCGTGCG
GGTTGTTTTTCTGCAGCCTACCCCGGATGGTTGTACCAGTCTACAGAGTA
GTTGTGCGTGCAGACAAAAACTGCAACTTCAGAGCTTAGACACAAAACTG
CAACTTCACAGCCTCACGCGGCTACGCATTTGTCAGATATCGGCCAGCCG
GCTGCTGCAGCTCTGATGGCTCCCCTCGAAACAGCTAACAGGAAGGCATC
GCGCGCTGAACTCTTCCATATGGCTTCGCTCCCCCTTGAAACCCCACCCA
CACCGCACAGCCCCTTGGCTCTCTCAGCAGTCTCGAAGTTTCTTCATCCA
GACGGAGCCGACGCCCAACCCGAACTCCCTTAAGTTTTTGCCCGGCCGAC
CTGTGCTGCCCCCGGACCACGGGACAGGGGTGTACTTCACCCCCGACGAC
AGAGAGAAAAGGTGGGCTGGGCTGGGCTGGGCTGGGCCTGGGCTGCCCCG
TAGCGGCGGTGGGGGCTGCTTGCTGTGTTCTCTCTGTCGTTGTGTTTCGG
GCATGTGGTCGAACAGGGCTGTACTGTACTCGCGCAACAACAGCAGTCGA
GCCTCTAAATTATACCCGCAACAAATAAACATTTTATTTAGTCGGCCACA
AGAAATTCGAACTTTCGCGTGGTTCGTATGCACGTACAGCAGTAGTAGCA
CTCGCACCCTAAGAAAGTCGGTGGGTAGGGAGGGTCGTACTGCTGTCGCA
ATTTGCATGACGGTTTTAGGATCGGGCAGGCCCAGGAGTGTGCCCGCGTC
TGACGCCGCTGGAAATCGGACGGCAAGGCTGGCAGGAACGACCAAGTTTG
TTCGCGGCCCCGCGTTCCCGATGTTTTTGGCCGGGTAGTGCTGACGTTTG
GCCAATGGCTCTGGTAGTAAGCGCGATTCGCGGATGGGTACACATGTCAG
TCTTCAGTCAGACCGTCCACAGCGAGGTTTTGCACGCGGTCAAACTACGT
ACGTGTGTGCACATCCCGGAGGTGAAAGACACAGCACCGGACCGCGCCCC
TTTCCCGGATGTTCTCATCTAGTACCAAAAATCCTCGCATTCGAACGAAG
AGATGCACGACGCCCTCCATAAACTCCCCCCACATCAATGCATGGAATAC
CGTAGTCCCACGGAGTGCCGTCTCTAGTTTAGTGTGAGGAGGCTCCGTCG
TTTATTTTGTGAACCGTTTTCCCTGTCCTTCGTCGTCTCTCTCCTCGCGC
CCGTGCGGAGAGCAGCCAGAGCCCTCTGGCGGTGGCTCTCCTTGGCTTGG
AAGGAGTCACCGGCGTTTTCCTCGGAACGGACTTCATCACGATATCCAAG
GTGCGAGCGAGCCCTTGCTTTTACGTCGTTCCCTCTCATGGTTACGGTTC
GTTGGACCGAACCAGCAGTGTGGCACGTTAGATGCGCGTGCCCTGCTGGC
ATTGACGACAACACAAAAATAACAGCATCCACGGCCCTGGGAACGGTCCC
CCGGCCATGGAGGCGTTTTTTCCCCGTCTGTTTGTGGCGTACGTGTACGC
CGCCAACCTCTCCTTTGTCAGTGCCGCGTTGCACGGCAGTAGTGCCAACA
GGCTTCCTCTCATCCTCATCACGATTGATACCCCCCCGCGCGCTCGCTCG
TGCTCTCTCGGATGTAAAAGTACAGACCGACGAAGGCGGGTGGGCGCTGA
TGAAGCCGGTAGTTTTCGGCGAGATCATGGACTTCTTCGCGGAGGGGAAA
CCCGTGATGCTGGCGGAGCCGGTGGTGACGGACACCACCATCCTAGACGA
CGACGACGAGGTGGTCGCCATGATTAAGGAGCTCCTGCAAGAGCGGGTGA
GACAGAGAGGCTGGCCTGTTCTTGAAAGAGAAACCGGGAAAACCGCACAA
CGCGGTGGATGTTTGGAAACGCGTAGAATAGTCGCGCGCTTGCTCTCGTG
TGACCACACAGGGATGCTCGTGCACGCCCGTGCTTCTCGTGAGAGCACAG
CGAGCGAGGGTTTTGATGTGGTGGCTCTCGACCTGTTAGCTCGGAATGGG
TACGCGTTGCCGGTTGGCTGGTGCAAGGGATCTACCGTATCTCCCTTCGC
GCCACGGCTGGCGGTCCGAGTGGCGAGCTCCCTCTAGAGAGCCGTCTCGA
AGAGCTACGGAGAAGGCGACACCAAGCTGCAGTCTCGCCGGTGGCGCCCT
CAGTCTTGAACAAGGACAAGGCGGTGGATGGACGACTTGGTTCGGGGTCA
GGAGAGAGGAGAGGTCCAACAGGACAGGCTGACTATTATTAGCCAAATGG
AGCGCTGGAGGGGCAGAGAGAGGCCGAGAACGCAAAGAGCGATGCATCTT
GTGTGCGTGCCCTCTGGTCGAAGACGGCGCGGAGTGGCTTCTTCTTTCTG
CCGGGACCAGGCATCGCCGTCTCGTCGACCACGATGATATGTGATGTTGC
ACCCACGGGTGTCAACGTGTCAGCTCTAAGAGCATGAGCCAACAGCGCCT
ACATGTGGCAGCCAGTTTGTCGGTGTTTGTTGGCTGCGACCCGTTGCAGC
AGAACATGCGTGAAACGTGTTTTTCTTGTCTTTTGTTTCTGCTCGTGACT
GCTTGTTTTTTCTCTCCGTTGCATACGTTAGGTGAGACCGGCGGTGCAGG
AAGACGGGGGGGACATATTCTACAAGGGCTTCGACCCCAGCACAGGCACC
GTGAACGTGCAGCTCGCG
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Coding sequence (CDS) from alignment at S-firma_M_contig943:18138..21105+

>mRNA_S-firma_M_contig943.20413.1 ID=mRNA_S-firma_M_contig943.20413.1|Name=mRNA_S-firma_M_contig943.20413.1|organism=Sphaerotrichia firma Sfir_13m male|type=CDS|length=1788bp|location=Sequence derived from alignment at S-firma_M_contig943:18138..21105+ (Sphaerotrichia firma Sfir_13m male)
ATGGCTACCATGTCAAGATCTCTCGGGCCTCGCGCACTGCGACCGCTGTG
GTCAAGAATCGCTGCAGAGTCCTTGGGAACGCAAGCCAGTACCGCGTTCC
CAGCACAAACTCGCCGCCTGCACGTTCTCTTATCCGGCAACTCGTCAGCA
GCCGCCCTGCCGGCGTCTCAACTGAGCCAACATCCCAGAAATCGTGATGG
CTACCATGTCAAGATCTCTCGGGCCTCGCGCACTGCGACCGCTGTGGTCA
AGAATCGCTGCAGAGTCCTTGGGAACGCAAGCCAGTACCGCGTTCCCAGC
ACAAACTCGCCGCCTGCACGTTCTCTTATCCGGCAACTCGTCAGCAGCCG
CCCTGCCGGCGTCTCAACTGAGCCAACATCCCAGAAATCGTGCCCCTTGG
CTCTCTCAGCAGTCTCGAAGTTTCTTCATCCAGACGGAGCCGACGCCCAA
CCCGAACTCCCTTAAGTTTTTGCCCGGCCGACCTGTGCTGCCCCCGGACC
ACGGGACAGGGGTGTACTTCACCCCCGACGACAGAGAGAAAAGCCCCTTG
GCTCTCTCAGCAGTCTCGAAGTTTCTTCATCCAGACGGAGCCGACGCCCA
ACCCGAACTCCCTTAAGTTTTTGCCCGGCCGACCTGTGCTGCCCCCGGAC
CACGGGACAGGGGTGTACTTCACCCCCGACGACAGAGAGAAAAGCCAGAG
CCCTCTGGCGGTGGCTCTCCTTGGCTTGGAAGGAGTCACCGGCGTTTTCC
TCGGAACGGACTTCATCACGATATCCAAGCCAGAGCCCTCTGGCGGTGGC
TCTCCTTGGCTTGGAAGGAGTCACCGGCGTTTTCCTCGGAACGGACTTCA
TCACGATATCCAAGACCGACGAAGGCGGGTGGGCGCTGATGAAGCCGGTA
GTTTTCGGCGAGATCATGGACTTCTTCGCGGAGGGGAAACCCGTGATGCT
GGCGGAGCCGGTGGTGACGGACACCACCATCCTAGACGACGACGACGAGG
TGGTCGCCATGATTAAGGAGCTCCTGCAAGAGCGGGTGAGACAGAGAGGC
TGGCCTGTTCTTGAAAGAGAAACCGGGAAAACCGCACAACGCGGTGGATG
TTTGGAAACGCGTAGAATAGTCGCGCGCTTGCTCTCGTGTGACCACACAG
GGATGCTCGTGCACGCCCGTGCTTCTCGTGAGAGCACAGCGAGCGAGGGT
TTTGATGTGGTGGCTCTCGACCTGTTAGCTCGGAATGGGTACGCGTTGCC
GGTTGGCTGGTGCAAGGGATCTACCGTATCTCCCTTCGCGCCACGGCTGG
CGGTCCGAGTGGCGAGCTCCCTCTAGACCGACGAAGGCGGGTGGGCGCTG
ATGAAGCCGGTAGTTTTCGGCGAGATCATGGACTTCTTCGCGGAGGGGAA
ACCCGTGATGCTGGCGGAGCCGGTGGTGACGGACACCACCATCCTAGACG
ACGACGACGAGGTGGTCGCCATGATTAAGGAGCTCCTGCAAGAGCGGGTG
AGACAGAGAGGCTGGCCTGTTCTTGAAAGAGAAACCGGGAAAACCGCACA
ACGCGGTGGATGTTTGGAAACGCGTAGAATAGTCGCGCGCTTGCTCTCGT
GTGACCACACAGGGATGCTCGTGCACGCCCGTGCTTCTCGTGAGAGCACA
GCGAGCGAGGGTTTTGATGTGGTGGCTCTCGACCTGTTAGCTCGGAATGG
GTACGCGTTGCCGGTTGGCTGGTGCAAGGGATCTACCGTATCTCCCTTCG
CGCCACGGCTGGCGGTCCGAGTGGCGAGCTCCCTCTAG
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