mRNA_S-firma_M_contig943.20411.1 (mRNA) Sphaerotrichia firma Sfir_13m male
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Overview
Homology
BLAST of mRNA_S-firma_M_contig943.20411.1 vs. uniprot
Match: A0A6H5KZP3_9PHAE (NB-ARC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KZP3_9PHAE) HSP 1 Score: 512 bits (1319), Expect = 1.990e-159 Identity = 273/511 (53.42%), Postives = 339/511 (66.34%), Query Frame = 2
Query: 1142 ASRVKIPPGAPRIRDWYIEREIVIFKACDQLVFGRTTSDTSDQPRMVGLAGPSGSGKSTVASMVIAREDVRASFHKGVLWLQVGQGAEDHLPELMHRLAVMVYETVMLKGCRPPIKAGFGVDPEDGAAYIREVVDESSQRFLVVADDVWEIEVLKELKRAGAWVLYTTRQDELLLGSPLLRLDQVLKEEAEMVLRRAAELDDKVNLPEAAYELMERCEFVVLDLALVGRWSMIRGRHDSKVWRTALDRVVEMQKNGDGGQPLSWRGAMLHAGLEELACDNPQNKELYLALAVMPKGLAFPSEVTAMLLHGADYSTQDLAAAGKIASTLERWSILTLEGGGKYRVHDEHTDFLQRRLSANQDIRGRILPRWRGFISSVRALSAFSALQLVKIWDVFAAIEGRGVASKPYDAALDALGGPIHSDXXXXXXXXXDFGVAAQKAGEYHWARGDWFEAYTKLSQAMAVLGICG---NSLIFAANQHSLGVSACTLGKKEEGERFLRRALAIREETL 2665
A V +P GAPRI +W++ER+ + +ACD L G S+ + PR+VG++GP GSGKST+ASMVIAR+DVR F+KGVLWL VG+GA+ LPELM LA MVYETV+ K CRPP AG GVDPEDGA YI EVV+ES+ RFLVVADD+ E EVL+ELK AG WVLYT+R+D+LL G+PLLRLD V KEE MVLRRAA L D LP AA+ELM+RCE+ + LA GRW ++RG+ D + WR AL + E QK G G+ L+WR AML G +EL D+ KELYL+LA++PKGLAF S+V A+LL+G + S +L AAGK TLER SILTLE GKYRVH+ H DF++ AN + R L RWRG+ S +RALS +S+ LVKIWDV A +EG G + PYDAALD + A ++A +HW R D EAYTK Q + +SL A H LG+ G+KEE E +RAL I E L
Sbjct: 119 AGEVAVPSGAPRIHEWHVERKEAVAEACDSLGIGSGKSEFFEMPRVVGMSGPGGSGKSTLASMVIARQDVREYFYKGVLWLPVGEGAKHCLPELMLHLARMVYETVLRKACRPPRLAGVGVDPEDGAGYIHEVVNESNHRFLVVADDIREPEVLEELKWAGVWVLYTSRRDDLLTGAPLLRLDAVTKEEGGMVLRRAAGLGDDATLPPAAHELMQRCEYGAMQLAFAGRWGVVRGKSDEEAWRAALGHIAEAQKRGGNGRLLAWRDAMLRIGPDELEADSLHTKELYLSLAILPKGLAFRSKVAAVLLYGDECSADELEAAGKALETLERLSILTLEVSGKYRVHEVHADFVRECEVANNEEREMALARWRGYASDLRALSTYSSAWLVKIWDVIAQLEGTGPVASPYDAALDRV-----------DPSSPKLAKALKRAARFHWRREDRLEAYTKQYQLRLIEETAAEGPSSLAVAKTLHILGMCVYKAGRKEEAEDNYQRALTIFRERL 618
BLAST of mRNA_S-firma_M_contig943.20411.1 vs. uniprot
Match: A0A6H5KXU5_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXU5_9PHAE) HSP 1 Score: 483 bits (1243), Expect = 6.210e-149 Identity = 266/507 (52.47%), Postives = 333/507 (65.68%), Query Frame = 2
Query: 1148 RVKIPPGAPRIRDWYIEREIVIFKACDQLVFGRTTSDTS---DQPRMVGLAGPSGSGKSTVASMVIAREDVRASFHKGVLWLQVGQGAEDHLPELMHRLAVMVYETVMLKGCRPPIKAGFGVDPEDGAAYIREVVDESSQRFLVVADDVWEIEVLKELKRAGAWVLYTTRQDELLLGSPLLRLDQVLKEEAEMVLRRAAELDDKVNLPEAAYELMERCEFVVLDLALVGRWSMIRGRHDSKVWRTALDRVVEMQK-NGDGGQPLSWRGAMLHAGLEELACDNPQNKELYLALAVMPKGLAFPSEVTAMLLHGADYSTQDLAAAGKIASTLERWSILTLE-GGGKYRVHDEHTDFLQRRLSANQDIRGRILPRWRGFISSVRALSAFSALQLVKIWDVFAAIEGRGVASKPYDAALDALGGPIHSDXXXXXXXXXDFGVAAQKAGEYHWARGDWFEAYTKLSQAMAVLGICG--NSLIFAANQHSLGVSACTLGKKEEGERFLRRALA 2647
RV IP GAP IRDWY+ER V + C L G + S +QPRMVGLAGP G+GKSTVASMV+ + DV+A F VLWL VG+GA+D LP LM LA V ETV+ K R P +A G++ EDGAAYIRE + RFLVVADDVW+ EVL EL+RAGAWV+YTTR+ EL +P +RL++VL+EEAEM+LRRAA+L +K LP AAYELM RC+F VLDLALVGRW IRGR + WR ALD ++E Q+ GDGGQ L WR A+L AGL LA DNPQ ELY ALA++P GLAFP EV +LL+G D+S L AA + TLER SILTLE G Y VH+ H DF+ R A R LPRWR +ISSVRAL+ +S+ L K+W+ A +EG G PY+AAL A+ + A ++A E+H+ RGDW EA+ K S+ + + + A H+LG+ AC +G+++E E +LRRALA
Sbjct: 172 RVNIPSGAPSIRDWYVERVKVEAQICHHLGIGTSNGIPSFPEEQPRMVGLAGPGGAGKSTVASMVVTQVDVQAFFRGRVLWLSVGKGAKDRLPTLMFELAKTVRETVLQKMARRPREATVGINSEDGAAYIREEAGKGDTRFLVVADDVWDAEVLAELRRAGAWVIYTTRKAELFPETPAIRLEEVLEEEAEMMLRRAADLGEKTRLPPAAYELMRRCDFSVLDLALVGRWGKIRGRSCERAWRAALDSIIETQRAGGDGGQLLPWRAAVLRAGLGVLASDNPQTTELYYALALLPTGLAFPPEVALILLYGDDFSESALKAAEAVLGTLERLSILTLEENSGWYHVHENHVDFVLDRPLAKHYTRDTALPRWRQYISSVRALNTYSSAWLDKVWEKLAKVEGEGFVRSPYNAALSAIMDDSEGELLE----------ALRRAAEFHFCRGDWSEAFDKYSELLLIKEQTAGPDHPDVAKILHNLGMCACEVGREKETEGYLRRALA 668
BLAST of mRNA_S-firma_M_contig943.20411.1 vs. uniprot
Match: D7G5Y4_ECTSI (NB-ARC and TPR containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5Y4_ECTSI) HSP 1 Score: 477 bits (1227), Expect = 6.580e-149 Identity = 263/507 (51.87%), Postives = 332/507 (65.48%), Query Frame = 2
Query: 1148 RVKIPPGAPRIRDWYIEREIVIFKACDQLVFGRTTSDTS---DQPRMVGLAGPSGSGKSTVASMVIAREDVRASFHKGVLWLQVGQGAEDHLPELMHRLAVMVYETVMLKGCRPPIKAGFGVDPEDGAAYIREVVDESSQRFLVVADDVWEIEVLKELKRAGAWVLYTTRQDELLLGSPLLRLDQVLKEEAEMVLRRAAELDDKVNLPEAAYELMERCEFVVLDLALVGRWSMIRGRHDSKVWRTALDRVVEMQK-NGDGGQPLSWRGAMLHAGLEELACDNPQNKELYLALAVMPKGLAFPSEVTAMLLHGADYSTQDLAAAGKIASTLERWSILTLE-GGGKYRVHDEHTDFLQRRLSANQDIRGRILPRWRGFISSVRALSAFSALQLVKIWDVFAAIEGRGVASKPYDAALDALGGPIHSDXXXXXXXXXDFGVAAQKAGEYHWARGDWFEAYTKLSQAMAVLGICG--NSLIFAANQHSLGVSACTLGKKEEGERFLRRALA 2647
RV IP GAP IRDWY+ER V + C L G + S +QPRMVGLAGP G+GKSTVASMV+ + DV+A F VLWL VG+GA+D LP LM LA V ETV+ K R P +A G++ EDGAAYIRE + RFLVVADDVW+ EVL EL+RAGAWV+YTTR+ EL G+P +RL++VL+EEAEM+LRRAA+L ++ LP AAYELM+RC+F VLDLALVGRW IR R WR ALD ++E Q+ GDGGQ L WR A+L AGL LA DNPQ ELY ALA++P GLAFP EV +LL+G D+S L AA + TLER SILTLE G Y VH+ H DF+ R A R LPRWR +ISSVRAL+ +S+ L K+W+ + +EG G PY+AAL+A+ + A ++A E+H+ R DW EA+ K S + + + A H+LG+ AC +G+++E E +LRRALA
Sbjct: 6 RVNIPSGAPSIRDWYVERVGVATQICHHLGIGTSNGIPSFPGEQPRMVGLAGPGGAGKSTVASMVVTQVDVQAFFRGRVLWLSVGKGAKDRLPALMFELANRVRETVLQKMARRPREATVGINSEDGAAYIREEAGKGDTRFLVVADDVWDAEVLGELRRAGAWVIYTTRKTELFPGTPAIRLEEVLEEEAEMMLRRAADLGEQARLPPAAYELMKRCDFAVLDLALVGRWGNIRRRSCESAWRAALDSIIETQRAGGDGGQLLPWRAAVLRAGLGVLASDNPQTTELYYALALLPTGLAFPPEVALILLYGDDFSESALKAAEAVLGTLERLSILTLEENSGWYHVHENHVDFVLDRPLAKHYTRDTALPRWRRYISSVRALNTYSSAWLDKVWEKLSKVEGEGFVRSPYNAALNAIMDDSEGELLE----------ALRRAAEFHFCREDWSEAFDKYSNLLLIKEQTAGPHHPDVAKILHNLGMCACEVGREKETEGYLRRALA 502
BLAST of mRNA_S-firma_M_contig943.20411.1 vs. uniprot
Match: A0A6H5JL31_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL31_9PHAE) HSP 1 Score: 439 bits (1130), Expect = 5.740e-131 Identity = 265/522 (50.77%), Postives = 326/522 (62.45%), Query Frame = 2
Query: 1112 LEEQRRMTDLASRVKIPPGAPRIRDWYIEREIVIFKACDQLVFGRTTSDTSDQPRMVGLAGPSGSGKSTVASMVIAREDVRASFHKGVLWLQVGQGA-EDHLPELMHRLAVMVYETVMLKGCRPPIKAGFGVDPEDGAAYIREVVDESSQRFLVVADDVWEIEVLKELKRAGAW-VLYTTRQDELLLGSPLLRLDQVLKEEAEMVLRRAAELDDKVNLPEAAYELMERCEFVVLDLALVGRWSMIRGRHDSKVWRTALDRVVEMQKNGDGGQPLSWRGAMLHAGLEELACDNPQNKELYLALAVMPKGLAFPSEVTAMLLHGADYS---TQDLAAAGKIASTLERWSILTLEGGGKYRVHDEHTDFLQRRLSANQDIRGRILPRWRGFISSVRALSAFSALQLVKIWDVFAAIEGRGVASKPYDAALDALGGPIHSDXXXXXXXXXDFGVAAQKAGEYHWARGDWFEAYTKLSQAMAV----LGICGNSLIFAANQHSLGVSACTLGKKEEGERFLRRALAI 2650
L+EQRR+ DLAS V+IP APRIRD ++ER VI + C L T+ + ++VGLAG GSGKSTVASMVI REDVRA F GVLWL VGQ A D L EL+ LA MVYETV K CRP K G D ED AAYI+ + E +RFLVVADDVW+ EVL EL+RA W VLYT+R +LL +P++ LDQ+ +EEAEMVLR AAEL LPEAAY+LM RCE+ LDL VGRWS R R WR ALD +V+ Q G+G PLSWR A+LH GLEELA +N N+ELYLALAV+P+G FP +V A+LL+G S +D A I TLERWSI+T GGG YRVHDEHTDF++ +ANQ R L RWR ++SSV AL S L + W+V A +G V S+PY L+ALGG S D +A + A ++ R W A SQ + + G+ +S++ A H LG+ G+ EE E L+RAL I
Sbjct: 11 LQEQRRVADLASTVRIPTTAPRIRDRFVERGEVISQVCSLLGIEDHTTAYPAEMKVVGLAGAGGSGKSTVASMVIRREDVRAFFPGGVLWLSVGQRAGRDRLLELLTSLAGMVYETVFQKRCRPLRKGVIGTDDEDPAAYIQCLQVERPRRFLVVADDVWQTEVLDELRRASVWGVLYTSRNTDLLPRAPVVLLDQLDREEAEMVLRNAAELAKDACLPEAAYDLMRRCEYAALDLDFVGRWSRTRRRTSELAWRGALDCIVDAQTRGEGRLPLSWRAAVLHTGLEELAGENSANRELYLALAVIPRGQPFPPDVAAVLLYGDGRSGEEKEDREEAKNIFETLERWSIITRVGGGWYRVHDEHTDFIRASFAANQHARNTTLIRWRRYMSSVSALVTLSEDWLSEGWNVLAEAQGEPVPSQPY---LEALGGLAPSSA--------DRPMALRTAASFYRDREQWMPASDYFSQLLIIQEHTAGV--DSVVVARTLHELGLCVYMSGRAEEAELRLKRALRI 519
BLAST of mRNA_S-firma_M_contig943.20411.1 vs. uniprot
Match: A0A6H5JI56_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI56_9PHAE) HSP 1 Score: 344 bits (882), Expect = 2.560e-94 Identity = 218/537 (40.60%), Postives = 304/537 (56.61%), Query Frame = 2
Query: 1139 LASRVKIPPGAPRIRDWYIEREIVIFKACDQL-VFGRTTSDTSDQPRMVGLAGPSGSGKSTVASMVIAREDVRASF-HKGVLWLQVGQGAEDHLPELMHRLAVMVYETVMLKGC-------RPPIKAGFGVDPEDGAAYIREVV-----DESSQRF---LVVADDVWEIEVLKELKRAGAWVLYTTRQDELLL----GSPLLRLDQVLKEEAEMVLRRAAELDDKVNLPEAAYELMERCEFVVLDLALVGRWSMIRGRHDSKVWRTALDRVVEMQKNGDGGQPLSWRGAMLHAGLEELACDNPQNKELYLALAVMPKGLAFP-SEVTAMLLHGADYSTQDLAAAGKIASTLERWSILTLEGGGKYRVHDEHTDFLQRRLSANQDIRGRILPRWRGFISSVRALSAFSALQLVKIWDVFAAIE-GRGVAS--KPYDAALDALGGPIHSDXXXXXXXXXDFGV--AAQKAGEYHWARGDWFEAYTKLSQAMAV-LGICGNSLIFAANQHSLGVSACTLGKKEEGERFLRRALAIREETL 2665
L S+ K P AP ++DW+I+RE V+ CD+L V R S S +P +VG+AGPSG+GKST+ASM+IAR DVR F K ++WL VGQGA D L ++M+RLAVMV+E V+ RPP GV+PEDGAAY+RE++ + SS F LVVADD+WE EVL EL+ GA +LYTTR +E LL GS +LR+D+V + EAE +LRRAA+L D LP+AA++++ R V +D+A VGRW ++RG +D W L V++ Q G L WR A+L GL L + KELYL+L V+P+ L+F +VTA++ G S ++L AA +TLE+WS+L GG+YRVH H D + +S + G L RWR +S+ A+ A+ +LV IW ++E G G A +PY +DA+ D G ++ + W + A S+ +A N A ++LG A G+ E E + RR LAI E+ L
Sbjct: 298 LYSKAKGPAEAPLLQDWFIQREPVVAAICDRLGVNDRGGSRASGEPPVVGVAGPSGAGKSTIASMIIARNDVRGHFSEKRIVWLPVGQGARDRLLDVMYRLAVMVHELVVNSSSFPDDGPFRPPQPPDIGVEPEDGAAYVREILTADEGERSSGGFGELLVVADDIWEAEVLAELRSTGASILYTTRSEEDLLAASGGSDVLRVDEVTEGEAEEILRRAADLLDHTKLPDAAHDIIRRGGPVAMDVAYVGRWDIVRGNNDQAAWAVVLAHVIDAQNFMKGAALLPWRSAVLRVGLTRLGLADQGTKELYLSLGVLPRNLSFSVGDVTALVSDG---SAEELQAATLAITTLEQWSVLVRTEGGRYRVHHSHADMAWQGISEDPATLGSALARWRNRVSTAEAVLAWRTEELVDIWQAIWSLEIGEGAAEIGQPYSEIVDAMN-------------LSDAGAFQLLRRIAFFQWMTNEPDAACMSWSKLLASGEDSAANDPDVHAIMYTLGAHALVSGRTHEAEGWFRRTLAIEEKVL 818
BLAST of mRNA_S-firma_M_contig943.20411.1 vs. uniprot
Match: D8LT49_ECTSI (NB-ARC and TPR repeat-containig protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT49_ECTSI) HSP 1 Score: 338 bits (867), Expect = 1.490e-92 Identity = 214/531 (40.30%), Postives = 299/531 (56.31%), Query Frame = 2
Query: 1154 KIPPGAPRIRDWYIEREIVIFKACDQL-VFGRTTSDTSDQPRMVGLAGPSGSGKSTVASMVIAREDVRASF-HKGVLWLQVGQGAEDHLPELMHRLAVMVYETVMLKGC------RPPIKAGFGVDPEDGAAYIREVV-----DESSQRF---LVVADDVWEIEVLKELKRAGAWVLYTTRQDELLL----GSPLLRLDQVLKEEAEMVLRRAAELDDKVNLPEAAYELMERCEFVVLDLALVGRWSMIRGRHDSKVWRTALDRVVEMQKNGDGGQPLSWRGAMLHAGLEELACDNPQNKELYLALAVMPKGLAFP-SEVTAMLLHGADYSTQDLAAAGKIASTLERWSILTLEGGGKYRVHDEHTDFLQRRLSANQDIRGRILPRWRGFISSVRALSAFSALQLVKIWDVFAAIE-GRGVAS--KPYDAALDALGGPIHSDXXXXXXXXXDFGV--AAQKAGEYHWARGDWFEAYTKLSQAMAV-LGICGNSLIFAANQHSLGVSACTLGKKEEGERFLRRALAIREETL 2665
K P AP ++DW+I+RE V+ CD+L V R S S +P +VG+AGPSG+GKST+ASM++AR DVR F KGV+WL VGQGA D L ++M+RLAVMV+E RPP GV+PEDGAAY+RE++ + SS F LVVADDVWE EVL EL+ GA +LYTTR +E LL GS +LR+D+V + EAE +LRRAA L D LP+AA++++ R V +D+A VGRW ++RG++D W L V++ Q G L WR A+L G+ L + KELYL+L V+P+ L+F +VTA++ G S ++L AA +TLE+WS+L GG+YRVH H D + +S + I G L RWR +S+ A+ + +LV IW+ ++E G G +PY +DA+ D G ++ + W + A S+ +A N ++LG A G+ E E + RR LAI E+ L
Sbjct: 259 KSPAEAPLLQDWFIQREPVVAAICDRLGVNDRGRSRASGEPPVVGVAGPSGAGKSTIASMIVARHDVRGHFSQKGVVWLSVGQGARDRLLDVMYRLAVMVHELADSSSSPDDGPFRPPRTPDIGVEPEDGAAYVREILAADEGERSSGGFGELLVVADDVWEAEVLAELRNTGASILYTTRSEEDLLAASGGSSVLRVDEVTEGEAEELLRRAAALLDYSKLPDAAHDIIRRGGSVAMDVAYVGRWDIVRGKNDQAAWAAVLAHVIDAQNFMKGAALLPWRSAVLRVGVTRLGLADQGTKELYLSLGVLPRNLSFSVDDVTALVSDG---SAEELQAATLAMATLEQWSVLVRTEGGRYRVHHSHADMAWQGISEDPAILGPALARWRNRVSTAEAVLTWRTEELVDIWETIWSLEIGEGAEDIGQPYAETVDAM-------------DLSDAGAFQLLRRIAFFQWLTNEPDAACMSWSKLLASGEDSAANHPDVHVTMYTLGAHALISGRTPEAEGWFRRTLAIEEKVL 773
BLAST of mRNA_S-firma_M_contig943.20411.1 vs. uniprot
Match: A0A6H5JK89_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK89_9PHAE) HSP 1 Score: 322 bits (824), Expect = 4.160e-86 Identity = 233/604 (38.58%), Postives = 318/604 (52.65%), Query Frame = 2
Query: 1118 EQRRMTDLASRVKIPPGAPRIRDWYIEREIVIFKACDQL--VFGRTTSDTSD--QPRMVGLAGPSGSGKSTVASMVIAREDVRASFHKGVLWLQV-GQGAEDHLPELMHRLAVMVYETVMLKG--------CRPP-IKAGFGVDPEDGAAYIREVV-------DESS------------QRFLVVADDVWEIEVLKELKRAGAWVLYTT--------RQDELLLG-------SPLLRLDQVLKEEAEMVLRRAAELDDKVNLPEAAYELMERCEFVVLDLALVGRWSMIRGRHDSKVWRTALDRVVEMQKNGDGGQPLS---WRGAMLHAGLEELACDNPQNKELYLALAVMPKGLAF-PSEVTAMLLHG---------ADYSTQDLAAAGKIASTLERWSILTLEGGGKYRVHDEHTDFLQRRLSANQDIRGRILPRWRGFISSVRALSAFSALQLVKI-WDVFAAIEGRGVASKPYDAALDALGGPIHSDXXXXXXXXXDFGVAAQKAGEYHWARGDWFEAYTKLSQAMAV---------------LGICGNSLIFAANQHSLGVSACTLGKKEEGERFLRRALAIREETLGV-HLEVANTL 2695
E+ R+ LAS+VK+P APRI+ WYI R + C +L G D D +PRMVGLAGP+G GKSTV S+V+AREDVRA F G++WL V G+GAE LP+LM LA MVYET++ G RPP G D E+GAAYIR + +E R+L+VADDV+E EVL+EL+ GAWVLYTT R E G + +LRLD + E E VLRRA+ LD + LP+ A +L++ VV+DLA +GRW ++RG D+K W AL+ V + GDGGQ + W A+L AG+ +LA N + K+LYL+LAV+PKGL+F P++ A+L G A +T DL A ++ LER S+L LE GG+Y +H H DF++ +S R R L RWR S+ AL A+ V+I W + + + PYDA LD + SD F ++ + G+ A+ K ++ + V + G L+ A H+LG+ A LG EE RA +IREE LG H + A++L
Sbjct: 228 ERNRVAFLASKVKVPSRAPRIQAWYIPRSETVEDVCARLGVCSGSAVGDLGDHEEPRMVGLAGPTGCGKSTVTSLVVAREDVRAYFRDGIVWLPVRGKGAEHRLPDLMLLLANMVYETILKSGEASWSSKKLRPPRTPGGVACDRENGAAYIRGALGITFPGREEGDGGGGSHEQRRWRPRYLIVADDVYEPEVLEELQGIGAWVLYTTTRSASFIRRNGERSEGDGDGGDHADVLRLDNISDAEGETVLRRASGLDAEAELPQPALDLIKSYGSVVMDLAYIGRWGVVRGTTDAKAWEAALNSVF--LEGGDGGQEWTRRRWHTAVLFAGMADLARLNDKAKDLYLSLAVLPKGLSFTPTDAAALLFGGGGDTKATQAAKAATPDLGAVMEVLGVLERCSVLFLEEGGRYCMHGSHADFVRELISCFPLSRKRALGRWREHTSTPAALFAWPVEDSVRIQWALLSLDDAVESPPPPYDAMLDGMD---QSDADT-------FSAVLERVAQVQALAGNLEGAHAKYTRLVGVTESRLEREAAGGGDSIRQAGAELLLADRLHNLGMIAGGLGSTEEAFACHGRARSIREERLGASHPDAAHSL 819
BLAST of mRNA_S-firma_M_contig943.20411.1 vs. uniprot
Match: D7G246_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G246_ECTSI) HSP 1 Score: 295 bits (754), Expect = 1.470e-83 Identity = 178/379 (46.97%), Postives = 224/379 (59.10%), Query Frame = 2
Query: 1538 VVDESSQRFLVVADDVWEIEVLKELKRAGAWVLYTTRQDELLLGSPLLRLDQVLKEEAEMVLRRAAELDDKVNLPEAAYELMERCEFVVLDLALVGRWSMIRGRHDSKVWRTALDRVVEMQKNGDGGQPLSWRGAMLHAGLEELACDNPQNKELYLALAVMPKGLAFPSEVTAMLLHGADYS---TQDLAAAGKIASTLERWSILTLEGGGKYRVHDEHTDFLQRRLSANQDIRGRILPRWRGFISSVRALSAFSALQLVKIWDVFAAIEGRGVASKPYDAALDALGGPIHSDXXXXXXXXXDFGVAAQKAGEYHWARGDWFEAYTKLSQAMAV--LGICGNSLIFAANQHSLGVSACTLGKKEEGERFLRRALAIREE 2659
V DE +R LVVADDV E EVL+ELK GA +MVLRRAA+LD+ LP+A YELM RCEFVVLD+A VGRW ++RGR K W+ ALDR++E Q G+G PLSWR ++L AGLEELA DNP NKELYLALAV+P GL FPSEV A LL+ S +DL A ++A+TLERWSIL GGG YRVHDEH+DF++ LS N+D + R+L RWR +ISSVRAL A LVKIWD A+ + + +PYD AL+A+ P + A AG ++ R D A + S+ + + + + LI SL +SA G+ EE E RRA AI +E
Sbjct: 2 VEDEGRERVLVVADDVREAEVLQELKTEGA----------------------------DMVLRRAADLDESAVLPDAGYELMRRCEFVVLDIAFVGRWGVVRGRRKEKAWQMALDRILEAQAGGEGVGPLSWRASVLRAGLEELAVDNPLNKELYLALAVLPMGLTFPSEVAAALLYDDALSGEDLEDLEVAEEVAATLERWSILIRMGGGNYRVHDEHSDFIRGCLSTNKDTQDRVLRRWRRYISSVRALLACEPEDLVKIWDSLASDQDDVIDPRPYDRALEAMDMPS-----------AELPRALHLAGFFYMVREDGEGACSTFSKLLKLQETTVTSDGLIVWETLRSLHLSAYMSGRWEEAEVTQRRADAILKE 341
BLAST of mRNA_S-firma_M_contig943.20411.1 vs. uniprot
Match: D7G2X0_ECTSI (TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2X0_ECTSI) HSP 1 Score: 284 bits (727), Expect = 2.360e-75 Identity = 208/545 (38.17%), Postives = 282/545 (51.74%), Query Frame = 2
Query: 1277 MVGLAGPSGSGKSTVASMVIAREDVRASFHKGVLWLQV-GQGAEDHLPELMHRLAVMVYETVMLKG--------CRPP-IKAGFGVDPEDGAAYIREVVD-------------ESSQ------RFLVVADDVWEIEVLKELKRAGAWVLYTT--------RQDELLLG-----------SPLLRLDQVLKEEAEMVLRRAAELDDKVNLPEAAYELMERCEFVVLDLALVGRWSMIRGRHDSKVWRTALDRVVEMQKNGDGGQPLS---WRGAMLHAGLEELACDNPQNKELYLALAVMPKGLAFPSEVTAMLLHGADY-----STQDLAAAGKIASTLERWSILTLEGGGKYRVHDEHTDFLQRRLSANQDIRGRILPRWRGFISSVRALSAFSALQLVKIWDVFAAIEGRGVASKPYDAALDALGGPIHSDXXXXXXXXXDFGVAAQKAGEYHWARGDWFEAYTKLSQAMAV---------------LGICGNSLIFAANQHSLGVSACTLGKKEEGERFLRRALAIREETLGV-HLEVANTL 2695
MVGLAGP+G GKSTV S+V+AREDVRA F G++WL V G+GAE LP+LM LA MVYETV+ G RPP G D E+GAAYIR + ES + R+L+VADDV+E EVL+EL+ GAWVLYTT R E G + +LRLD + E E VLRRA+ LD + LP+ A +L + VV+DLA +GRW ++ G D K W AL+ V + G+GGQ + W A+L AG+ +LA N + K+LYL+LAV+PKGL+F A LL G D +T DL A ++ LE+ S+L LE GG+Y +H H DF++ +S R R L RWR S+ AL A+ V+I ++++ PYDA LD + SD F ++ + G+ A+ K ++ + V + G L+ A H+LG+ A LG EE RA +IREE LG H + A++L
Sbjct: 1 MVGLAGPTGCGKSTVTSLVVAREDVRAHFRDGIVWLPVRGKGAEHRLPDLMLLLANMVYETVLKSGEASWSSKKLRPPRTPGGVACDRENGAAYIRGALGITRPGGEEGDGGGESHEQRRWRPRYLIVADDVYEPEVLEELQGIGAWVLYTTTRSASFIRRNGERSEGDXXXXXXXGDHADVLRLDNISDAEGETVLRRASGLDPEAELPQPALDLFKSYGSVVMDLAYIGRWGVVHGTTDVKAWEVALNSVF--LEGGEGGQEWTRRRWHTAVLFAGMADLARLNDKAKDLYLSLAVLPKGLSFTPADAAALLFGGDTKAAKAATPDLGAVMEVLGVLEQCSVLFLEEGGRYCMHGSHADFVRELISCFPLSRKRALGRWREHASTPAALFAWPVEDSVRIQWALSSLDDAVEPPPPYDAMLDGMD---QSDADT-------FSAVLERVAQVQALAGNLEGAHAKYTRLVVVTESRLEREAAGGGDSISQAGAELLLADRLHNLGMIAGGLGSTEEAFACHGRARSIREERLGASHPDAAHSL 533
BLAST of mRNA_S-firma_M_contig943.20411.1 vs. uniprot
Match: A0A6H5KRK8_9PHAE (NB-ARC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KRK8_9PHAE) HSP 1 Score: 253 bits (645), Expect = 2.960e-65 Identity = 162/433 (37.41%), Postives = 245/433 (56.58%), Query Frame = 2
Query: 1142 ASRVKIPPGAPRIRDWYIEREIVIFKACDQLVFGRTTSDTSDQPRMVGLAGPSGSGKSTVASMVIAREDVRASFHKGVLWLQVGQGAEDHLPELMHRLAVMVYETVMLKGCRPPIKAGFGVDPEDGAAYIREVVDES----SQRFLVVADDVWEIEVLKELKRAGAWVLYTTRQDELL--LGSPLLRLDQVLKEEAEMVLRRAAELDDKVNLPEAAYELMERCEFVVLDLALVGRWSMIRGRHDSKVWRTALDRV-VEMQK-------NGDGGQPLSWRGAMLHAGLEELAC--DNPQNKELYLALAVMPKGLAFPSEVTAMLLHGADYSTQDLAAAGKIASTLERWSIL-TLEGGGKYRVHDEHTDFLQRRLSANQDIRGRILPRWRGFISSVRALSAFSALQLVKIWDVFAAIEGRGVAS-KPYDAALDAL 2386
A +P G P + W++ER V + VF +D P +VGL G SG+GK+T AS +++ VR +F G++WL V +G D+LP LM +LA MV+E + R P + +DG AY+++ V+ + LVVAD+VWE +V+ +L G W+L +TR +EL+ ++ +D++ + EAE VLRRAAEL + LP+ A +L+E C V +DLA VGRWS +RGR D W A +V EM K NG ++ R A+L AG E+LA D+ + + LYL+LAV+P G AF + A+LL+ + T+D A+ G + LERW+I+ ++E YR+HD H++F + L D+R + R ISS+ AL + + L +W + G G A+ +PY+ AL+AL
Sbjct: 198 AKVANVPKGTPTHKSWHVERRNVT-----ETVFQALDADGG--PHLVGLVGDSGAGKTTAASAIVSSIVVRETFSDGIVWLPVNEGVHDNLPCLMLQLAQMVFEDIGGSVGRRPSGS------DDGLAYVKQQVENGHGGKGLKCLVVADNVWESDVVSQLLETGMWILLSTRDEELVKRANGEVVGVDELSEAEAESVLRRAAELSPEARLPDDAKDLIELCGRVAMDLAFVGRWSTVRGRQDRTAWSDAACKVRAEMDKGGVTAESNGSEDSRVNRRRAILQAGFEDLAIGSDDERVQRLYLSLAVLPDGHAFTVKDAAVLLYDREPGTEDEASVGGVVEALERWTIIRSVEA--TYRMHDAHSNFARESLMDRGDVRRPAIKRLVRSISSLEALRSINRYTLKHLWAGVQRVGGDGWATTRPYEKALEAL 615 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig943.20411.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_M_contig943.20411.1 >prot_S-firma_M_contig943.20411.1 ID=prot_S-firma_M_contig943.20411.1|Name=mRNA_S-firma_M_contig943.20411.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=1122bp MPAPSSTVPVAAATGSSPTNKDAGVLKYVQGFVSGGASLLQEIPAEVLPVback to top mRNA from alignment at S-firma_M_contig943:7259..13114+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_M_contig943.20411.1 ID=mRNA_S-firma_M_contig943.20411.1|Name=mRNA_S-firma_M_contig943.20411.1|organism=Sphaerotrichia firma Sfir_13m male|type=mRNA|length=5856bp|location=Sequence derived from alignment at S-firma_M_contig943:7259..13114+ (Sphaerotrichia firma Sfir_13m male)back to top Coding sequence (CDS) from alignment at S-firma_M_contig943:7259..13114+ >mRNA_S-firma_M_contig943.20411.1 ID=mRNA_S-firma_M_contig943.20411.1|Name=mRNA_S-firma_M_contig943.20411.1|organism=Sphaerotrichia firma Sfir_13m male|type=CDS|length=6732bp|location=Sequence derived from alignment at S-firma_M_contig943:7259..13114+ (Sphaerotrichia firma Sfir_13m male)back to top |