mRNA_S-firma_M_contig9426.20409.1 (mRNA) Sphaerotrichia firma Sfir_13m male
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Overview
Homology
BLAST of mRNA_S-firma_M_contig9426.20409.1 vs. uniprot
Match: D7G2M3_ECTSI (Catalytic, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2M3_ECTSI) HSP 1 Score: 192 bits (489), Expect = 5.090e-59 Identity = 102/132 (77.27%), Postives = 112/132 (84.85%), Query Frame = 1
Query: 136 MQHGRPDLKAKVLGVVLQAPVSDREMLATLPGTAAFVKEARARKGGGELMPVAADEAPITPERFLSLATKEGDDDMFSADLTAEERNARLGHMASVPTAAFLSGADEFVPPPERGGPVPEALAETLRAAMVS 531
M+HGR DL+A V+GVVLQAPVSDRE L TLP T F++EAR R GGGELMPVAAD+APIT RF+SLATKEGDDDMFSADLTA+ER+ RLGHMASVPTAAFLSGAD+FVP P PE LAETLRAAMVS
Sbjct: 1 MKHGRSDLRAAVVGVVLQAPVSDREYLETLPSTEGFIEEARVRGGGGELMPVAADQAPITAARFISLATKEGDDDMFSADLTADERHGRLGHMASVPTAAFLSGADQFVPQGGGRSP-PEVLAETLRAAMVS 131
BLAST of mRNA_S-firma_M_contig9426.20409.1 vs. uniprot
Match: A0A6H5JTR6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTR6_9PHAE) HSP 1 Score: 177 bits (449), Expect = 4.950e-52 Identity = 94/130 (72.31%), Postives = 102/130 (78.46%), Query Frame = 1
Query: 1 GYGTSSLRQDVEELDELLDCLSSAPP---------------SSNFVLIGHSTGCQDAVFYMQHGRPDLKAKVLGVVLQAPVSDREMLATLPGTAAFVKEARARKGGGELMPVAADEAPITPERFLSLATK 345
GYGTSSLRQDVEELDELLD LSS P SS+F+LIGHSTGCQDAVFYM+HGRPDL+A V+GVVLQAPVSDRE L TLP T F++EAR R GGGELMPVAAD+APIT RFLSLATK
Sbjct: 120 GYGTSSLRQDVEELDELLDYLSSTPSPPVPEVASSDAGSSSSSSFLLIGHSTGCQDAVFYMKHGRPDLRAAVVGVVLQAPVSDREYLETLPSTEGFIEEARVRGGGGELMPVAADQAPITAARFLSLATK 249
BLAST of mRNA_S-firma_M_contig9426.20409.1 vs. uniprot
Match: D8RBS1_SELML (Uncharacterized protein n=2 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8RBS1_SELML) HSP 1 Score: 145 bits (366), Expect = 1.550e-39 Identity = 86/159 (54.09%), Postives = 107/159 (67.30%), Query Frame = 1
Query: 1 GYGTSSLRQDVEELDELLDCLSSAPPSSNFVLIGHSTGCQDAVFYMQHGRPDLKAKVLGVVLQAPVSDREMLATLPGTAAFVKEARAR-KGGGEL--MPVAADEA-PITPERFLSLATKEGDDDMFSADLTAEERNARLGHMASVPTAAFLSGADEFVP 465
GYGTSSL+QD +EL++L++ L + S VL+GHSTGCQD V+Y++ G +KA V G +LQAPVSDRE ATLPGTAA + A K G EL MP A+ A PIT RF SLA GDDDMFS+DL+ E+ RL HM+ +P S ADE+VP
Sbjct: 73 GYGTSSLKQDAQELEQLINYLINEENSHGVVLLGHSTGCQDIVYYLREGGICMKA-VRGAILQAPVSDREYRATLPGTAAMIDLADEMIKEGRELDLMPRGAEPAAPITAHRFRSLAGYMGDDDMFSSDLSDEQLRVRLEHMSKLPCQVIFSMADEYVP 230
BLAST of mRNA_S-firma_M_contig9426.20409.1 vs. uniprot
Match: A0A843TQ87_COLES (Uncharacterized protein n=1 Tax=Colocasia esculenta TaxID=4460 RepID=A0A843TQ87_COLES) HSP 1 Score: 144 bits (364), Expect = 1.090e-38 Identity = 85/159 (53.46%), Postives = 103/159 (64.78%), Query Frame = 1
Query: 1 GYGTSSLRQDVEELDELLDCLSSAPPSSNFVLIGHSTGCQDAVFYMQHGRPDLKAKVLGVVLQAPVSDREMLATLPGTAAFVKEARARKGGG---ELMPVAAD-EAPITPERFLSLATKEGDDDMFSADLTAEERNARLGHMASVPTAAFLSGADEFVP 465
GYGTSSL+QD ELD+L+ L + S VL+GHSTGCQD V YM+ +A V G +LQAPVSDRE ATLPGTAA + A + G +LMP AD EAPIT R+ SL GDDDMFS+DLT ++ RLGHM++ P S ADE+VP
Sbjct: 126 GYGTSSLKQDSLELDQLISYLINKENSEGVVLLGHSTGCQDIVHYMRSNSACSRA-VRGAILQAPVSDREYRATLPGTAAMIDLASSMINDGRGMDLMPRDADPEAPITAYRYHSLCAYMGDDDMFSSDLTDDQLRLRLGHMSNTPCQVVFSMADEYVP 283
BLAST of mRNA_S-firma_M_contig9426.20409.1 vs. uniprot
Match: A0A836C982_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C982_9STRA) HSP 1 Score: 141 bits (356), Expect = 3.860e-38 Identity = 90/175 (51.43%), Postives = 105/175 (60.00%), Query Frame = 1
Query: 1 GYGTSSLRQDVEELDELLDCLSSAPPSSNFVLIGHSTGCQDAVFYMQHGRPDLKAKVLGVVLQAPVSDREMLATLPGTAAFVKEARARKGGGELMPVAADEAPITPERFLSLATKEGDDDMFSADLTAEERNARLGHMASVPTAAFLSGADEFVPPPERGGPVPEALAETLRAAM 525
GYG SL QD +EL +LL CL P VL+GHSTGCQ +V +M+H + +V GVVLQA VSDR+ LATLP T V AR LMP AD APIT R+LSLA + GDDDMFS D + EE RLGHM +VPT S ADE+VP G AL E + AM
Sbjct: 79 GYGVGSLTQDCDELVDLLSCL---PAEGRIVLMGHSTGCQISVHFMKHAPQAARKRVAGVVLQAAVSDRDYLATLPQTQELVTLARTLPLTA-LMPREADIAPITAYRYLSLAARGGDDDMFSDDFSQEELKDRLGHM-TVPTLLLASLADEYVP----AGVDVSALVERIAGAM 244
BLAST of mRNA_S-firma_M_contig9426.20409.1 vs. uniprot
Match: A0A5N5HIH1_9ROSA (Uncharacterized protein n=9 Tax=Maleae TaxID=721813 RepID=A0A5N5HIH1_9ROSA) HSP 1 Score: 141 bits (355), Expect = 2.390e-37 Identity = 83/159 (52.20%), Postives = 99/159 (62.26%), Query Frame = 1
Query: 1 GYGTSSLRQDVEELDELLDCLSSAPPSSNFVLIGHSTGCQDAVFYMQHGRPDLKAKVLGVVLQAPVSDREMLATLPGTAAFVKEAR---ARKGGGELMPVAADE-APITPERFLSLATKEGDDDMFSADLTAEERNARLGHMASVPTAAFLSGADEFVP 465
GYGTSSL+QD ELD+L+ + S VL+GHSTGCQD V YM+ +A V +LQAPVSDRE ATLP TAA + A + G ELMP AAD APIT R+ SL GDDDMFS+DLT ++ RLGHM + P S ADE+VP
Sbjct: 126 GYGTSSLKQDAIELDQLISHFINKEDSEGVVLLGHSTGCQDVVHYMRTNAACSRA-VRAAILQAPVSDREYRATLPETAAMIDLASTMISEGRGSELMPSAADPGAPITAYRYHSLCAYNGDDDMFSSDLTDDQLRLRLGHMTNTPCQVIFSMADEYVP 283
BLAST of mRNA_S-firma_M_contig9426.20409.1 vs. uniprot
Match: A0A6J1CC96_MOMCH (UPF0613 protein PB24D3.06c n=1 Tax=Momordica charantia TaxID=3673 RepID=A0A6J1CC96_MOMCH) HSP 1 Score: 141 bits (355), Expect = 3.020e-37 Identity = 83/159 (52.20%), Postives = 100/159 (62.89%), Query Frame = 1
Query: 1 GYGTSSLRQDVEELDELLDCLSSAPPSSNFVLIGHSTGCQDAVFYMQHGRPDLKAKVLGVVLQAPVSDREMLATLPGTAAFVKEARARKGGG---ELMPVAAD-EAPITPERFLSLATKEGDDDMFSADLTAEERNARLGHMASVPTAAFLSGADEFVP 465
GYGTSSL+QD ELD+L+ L + S VL+GHSTGCQD V YM+ +A V G +LQAPVSDRE ATLP TAA + A G ELMP AD +PIT R+ SL + GDDDMFS+DLT ++ RLGHMA+ P S DE+VP
Sbjct: 137 GYGTSSLQQDAMELDQLISYLINKEDSEGVVLLGHSTGCQDIVHYMRTNAACSRA-VRGAILQAPVSDREYRATLPETAAMIDLASTMISEGRGLELMPRDADPSSPITANRYYSLCSYMGDDDMFSSDLTDDQLRMRLGHMANTPCQVIYSMGDEYVP 294
BLAST of mRNA_S-firma_M_contig9426.20409.1 vs. uniprot
Match: A0A7S1DUR2_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1DUR2_HEMAN) HSP 1 Score: 135 bits (341), Expect = 3.430e-37 Identity = 81/159 (50.94%), Postives = 104/159 (65.41%), Query Frame = 1
Query: 1 GYGTSSLRQDVEELDELLDCLSSAP-PSSNFVLIGHSTGCQDAVFYMQHGRPDLKAKVLGVVLQAPVSDREMLATLPGTAAFVKEARARKGGGE---LMPVAADEAPITPERFLSLATKEGDDDMFSADLTAEERNARLGHMASVPTAAFLSGADEFVP 465
GYGTSSL +D E+D L+ ++S + FV+ GHSTGCQDAV++ + G+ +V GV+LQAPVSDRE AT PGTA + A++ GG+ LMP +AD APIT R+LSL + GDDDMFS+DLT EE RLG VP +S DE+VP
Sbjct: 12 GYGTSSLSKDAREIDILIAHMASKRGQDTRFVVCGHSTGCQDAVWHCKKGKE--AGRVCGVILQAPVSDREYAATQPGTAEMLNVAKSLVDGGDKEALMPRSADLAPITASRYLSLNGRLGDDDMFSSDLTDEELRDRLG-CVGVPCLIAMSMEDEYVP 167
BLAST of mRNA_S-firma_M_contig9426.20409.1 vs. uniprot
Match: A0A6A4LGS4_9ERIC (Uncharacterized protein (Fragment) n=1 Tax=Rhododendron williamsianum TaxID=262921 RepID=A0A6A4LGS4_9ERIC) HSP 1 Score: 140 bits (353), Expect = 4.430e-37 Identity = 80/159 (50.31%), Postives = 101/159 (63.52%), Query Frame = 1
Query: 1 GYGTSSLRQDVEELDELLDCLSSAPPSSNFVLIGHSTGCQDAVFYMQHGRPDLKAKVLGVVLQAPVSDREMLATLPGTAAFVKEARARKGGG---ELMPVAAD-EAPITPERFLSLATKEGDDDMFSADLTAEERNARLGHMASVPTAAFLSGADEFVP 465
GYG +SL++D ELD+L+ L + S VL+GHSTGCQD V+YM+ P +A V +LQAPVSDRE ATLP TAA + A G G ELMP A+ +APIT R+ SL GDDDMFS+DL+ ++ RLGHM + P S ADE+VP
Sbjct: 127 GYGITSLKEDAMELDQLISYLINKEDSEGVVLLGHSTGCQDIVYYMRTNAPCSRA-VRAAILQAPVSDREYRATLPETAAMIDLASEMIGDGRVSELMPREANPDAPITASRYHSLCAYNGDDDMFSSDLSDDQLKMRLGHMTNTPCQVIFSMADEYVP 284
BLAST of mRNA_S-firma_M_contig9426.20409.1 vs. uniprot
Match: A0A4S4DFW9_CAMSI (Uncharacterized protein n=3 Tax=Camellia sinensis TaxID=4442 RepID=A0A4S4DFW9_CAMSI) HSP 1 Score: 139 bits (349), Expect = 8.930e-37 Identity = 80/159 (50.31%), Postives = 101/159 (63.52%), Query Frame = 1
Query: 1 GYGTSSLRQDVEELDELLDCLSSAPPSSNFVLIGHSTGCQDAVFYMQHGRPDLKAKVLGVVLQAPVSDREMLATLPGTAAFVKEARARKGGG---ELMPVAAD-EAPITPERFLSLATKEGDDDMFSADLTAEERNARLGHMASVPTAAFLSGADEFVP 465
GYG SSL+QD ELD+L++ L + S VL+GHSTGCQD V+YM+ +A V + QAPVSDRE LATLP TAA + A G ELMP A+ +APIT R+ SL GDDDMFS+DL+ ++ RLGHM++ P S ADE+VP
Sbjct: 124 GYGISSLKQDAVELDQLINYLINKEDSEGVVLLGHSTGCQDIVYYMRTNAACSRA-VRAAIFQAPVSDREYLATLPETAAMIDLASTMISEGRASELMPREANPDAPITASRYHSLCAYNGDDDMFSSDLSDDQLRMRLGHMSNTPCQVLFSMADEYVP 281 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig9426.20409.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_M_contig9426.20409.1 >prot_S-firma_M_contig9426.20409.1 ID=prot_S-firma_M_contig9426.20409.1|Name=mRNA_S-firma_M_contig9426.20409.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=194bp GYGTSSLRQDVEELDELLDCLSSAPPSSNFVLIGHSTGCQDAVFYMQHGRback to top mRNA from alignment at S-firma_M_contig9426:580..2275- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_M_contig9426.20409.1 ID=mRNA_S-firma_M_contig9426.20409.1|Name=mRNA_S-firma_M_contig9426.20409.1|organism=Sphaerotrichia firma Sfir_13m male|type=mRNA|length=1696bp|location=Sequence derived from alignment at S-firma_M_contig9426:580..2275- (Sphaerotrichia firma Sfir_13m male)back to top Coding sequence (CDS) from alignment at S-firma_M_contig9426:580..2275- >mRNA_S-firma_M_contig9426.20409.1 ID=mRNA_S-firma_M_contig9426.20409.1|Name=mRNA_S-firma_M_contig9426.20409.1|organism=Sphaerotrichia firma Sfir_13m male|type=CDS|length=1164bp|location=Sequence derived from alignment at S-firma_M_contig9426:580..2275- (Sphaerotrichia firma Sfir_13m male)back to top |