mRNA_S-firma_M_contig938.20353.1 (mRNA) Sphaerotrichia firma Sfir_13m male
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Overview
Homology
BLAST of mRNA_S-firma_M_contig938.20353.1 vs. uniprot
Match: D7G503_ECTSI (Protein-ribulosamine 3-kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G503_ECTSI) HSP 1 Score: 278 bits (710), Expect = 7.630e-90 Identity = 132/207 (63.77%), Postives = 160/207 (77.29%), Query Frame = 1
Query: 493 MTTMTLDEERKFGTKLARMHMHRGSDHFGFPLNTWLETSLQINDWSDDWCEFFSKHRLGHQAQRILEKYEDDKLAAKVEMLRVGLRERFFKGVDIKPSLLHGNLGSQNWGADTTGRAVVCDPACYFGHSEMELAMLTLFGSPCKAGFFVMYHELLPRKEPGYENRMFLYKLHHYLNLYLQFGRGFRGTCMALLNLLLGPSVRGGSSA 1113
M TM+ +E+RKFG KLARM +FG+ NTW SLQINDW DDWC FSKHRLG QA+ ILEK+ D ++A KVE LR+ LRERFFK + I PSLLHGNL S+NWG D +G+ V+ DPA YFGH EME++MLT+FGSPCK GFFV YH+LLPR+EPGY++R+ LY+L+HYLNLYLQ GR FR CMAL+ LL PS+ GSS+
Sbjct: 1 METMSTEEQRKFGEKLARMQRTFICPNFGYFRNTWCGESLQINDWEDDWCNLFSKHRLGQQAEMILEKHRDHEVATKVEKLRMNLRERFFKDLKITPSLLHGNLWSRNWGVDHSGKPVIYDPAVYFGHYEMEMSMLTMFGSPCK-GFFVKYHDLLPREEPGYQDRILLYQLYHYLNLYLQHGRDFRSPCMALVKTLLAPSIPSGSSS 206
BLAST of mRNA_S-firma_M_contig938.20353.1 vs. uniprot
Match: A0A6H5L5M7_9PHAE (Protein-ribulosamine 3-kinase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5M7_9PHAE) HSP 1 Score: 198 bits (504), Expect = 5.090e-58 Identity = 122/266 (45.86%), Postives = 161/266 (60.53%), Query Frame = 1
Query: 400 RRTRSVRVPKVIAVTTLPCGPAAALILEYVEMTTMTLDEERKFGT--KLARMHMHRGSDHFGFPLNTWLETSLQINDWSDDWCEFFSKHRLGHQAQRILEKYEDDKLAAKVEMLRV----------------GLR----------ERFFKGVDIKPSLLHGNLGSQNWGADTTGRAVVCDPACYFGHSEMELAMLTLFGSPCKAGFFVMYHELLPRKEPGYENRMFLYKLHHYLNLYLQFGRGFRGTCMALLNLLLGPSVRGGSSA 1113
R TR+VRVP+VIA+ TLP AALILEYV+M TM+ +E+RK G +LA G L+ + S Q+ D+ C H + H +R+ D +L ++ L + G R E + ++I PSLLHGNL S+NWG D +G+ V+ DPA YFGH EME++MLT+FGSPCK GFFV YH+LLPR+EPGY++R+ LY+L+HYLNLYLQ GRGFR CMAL+ LL PS+ GSS+
Sbjct: 16 RLTRTVRVPRVIALATLPERRGAALILEYVKMETMSTEEQRKVGCGEELAMS----APQELG-ALSPYGARSCQL---VDEPC-----HPVKHLVRRVA---ADQRLGRRLVQLLIQAQAGPTGRDDPGEARGSRGSHQGVETQGEPSREDLEITPSLLHGNLWSRNWGVDYSGKPVIYDPAVYFGHYEMEMSMLTMFGSPCK-GFFVRYHDLLPREEPGYQDRIMLYQLYHYLNLYLQHGRGFRSPCMALVKTLLAPSIPSGSSS 264
BLAST of mRNA_S-firma_M_contig938.20353.1 vs. uniprot
Match: UPI000E7038B4 (protein-ribulosamine 3-kinase, chloroplastic-like n=1 Tax=Papaver somniferum TaxID=3469 RepID=UPI000E7038B4) HSP 1 Score: 174 bits (442), Expect = 6.130e-48 Identity = 105/264 (39.77%), Postives = 154/264 (58.33%), Query Frame = 1
Query: 292 AFKAETKDGQFFFVKLDTTGDARAKLDGEVQGLHFMRRTRSVRVPKVIAVTTLPCGPAAALILEYVEMTTMTLDEERKFGTKLARMHMHRGSDH-FGFPLNTWLETSLQINDWSDDWCEFFSKHRLGHQAQRILEKYEDDKLAAKVEMLRVGLRERFFKGVDIKPSLLHGNLGSQNWGADTTGRAVVCDPACYFGHSEMELAMLTL--FGSPCKAGFFVMYHELLPRKEPGYENRMFLYKLHHYLNLYLQFGRGFRGTCMALLN 1074
A++ +T G FF G + +GE GL M T+SVRVPK++ V +LP G + +I+EY+E + D+ G KLA MH S+ FGF ++ + ++ QIN W+ DW +FF++HRLG+Q Q E++ D + K + L V R F+ V I+P LLHG+L S N +D G V+ DPACY+GH+E E M FG P F+ Y E++P K+ G+E R LY L+HYLN Y FG G+R + M++++
Sbjct: 76 AYRYDTDAGSFFVKTNRRIGVS--MFEGEALGLTAMYDTKSVRVPKLLKVGSLPSG-GSFIIMEYIEFGSSRGDQS-VLGKKLAEMHKAGKSNKGFGFDVDNTIGSTPQINTWTSDWVDFFAEHRLGYQLQLAREEHGDSAIYEKGQRL-VKSMGRLFENVTIEPCLLHGDLWSGNISSDKNGEPVILDPACYYGHNEAEFGMSWCAGFGGP----FYSSYFEVMP-KQQGFERRRDLYMLYHYLNHYNLFGSGYRSSAMSIID 329
BLAST of mRNA_S-firma_M_contig938.20353.1 vs. uniprot
Match: A0A1Y1ICK8_KLENI (Protein-ribulosamine 3-kinase n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1ICK8_KLENI) HSP 1 Score: 174 bits (441), Expect = 3.510e-47 Identity = 102/264 (38.64%), Postives = 152/264 (57.58%), Query Frame = 1
Query: 292 AFKAETKDGQFFFVKLDTTGDARAKLDGEVQGLHFMRRTRSVRVPKVIAVTTLPCGPAAALILEYVEMTTMTLDEERKFGTKLARMHMHRG--SDH-FGFPLNTWLETSLQINDWSDDWCEFFSKHRLGHQAQRILEKYEDDKLAAKVEMLRVGLRERFFKGVDIKPSLLHGNLGSQNWGADTTGRAVVCDPACYFGHSEMELAMLTLFGSPCKAGFFVMYHELLPRKEPGYENRMFLYKLHHYLNLYLQFGRGFRGTCMALLN 1074
A+K +T G FF +TG A + E GL M T+++RVPK + V TLP G + +I+E++E + + + G L MH S H FGF ++ + ++ Q N W+ DW +FF +HRLG Q +Y ++ L K + L L E GV++ P LLHG+L S N +D GR V+ DPACY+GHSE E M G + F+ YH+++P K+PG+E R+ +YKL+HYLN FG G+RG+CM++++
Sbjct: 138 AYKYDTDAGPFFVKSNRSTGPA--MFEAEAAGLEKMWETKTIRVPKPLKVGTLP-GGGSFIIMEFIEFGSRS--SQADLGRALGEMHKASTGQSPHGFGFFMDNTIGSTHQPNTWTSDWVDFFREHRLGFQLDLARRQYAENTLYEKGQKLLAKLPE-LLGGVEVAPVLLHGDLWSGNVASDKDGRPVILDPACYYGHSEAEFGMSWCAGF--NSSFYEAYHKVIP-KQPGFERRVEIYKLYHYLNHLNLFGSGYRGSCMSIID 392
BLAST of mRNA_S-firma_M_contig938.20353.1 vs. uniprot
Match: B4FVQ9_MAIZE (Protein-ribulosamine 3-kinase, chloroplastic n=15 Tax=Panicoideae TaxID=147369 RepID=B4FVQ9_MAIZE) HSP 1 Score: 172 bits (437), Expect = 3.790e-47 Identity = 102/263 (38.78%), Postives = 148/263 (56.27%), Query Frame = 1
Query: 286 HKAFKAETKDGQFFFVKLDTTGDARAKLDGEVQGLHFMRRTRSVRVPKVIAVTTLPCGPAAALILEYVEMTTMTLDEERKFGTKLARMHMHRGSDH-FGFPLNTWLETSLQINDWSDDWCEFFSKHRLGHQAQRILEKYEDDKLAAKVEMLRVGLRERFFKGVDIKPSLLHGNLGSQNWGADTTGRAVVCDPACYFGHSEMELAMLTLFGSPCKAGFFVMYHELLPRKEPGYENRMFLYKLHHYLNLYLQFGRGFRGTCMALL 1071
+ A + +T G FF G +GE GL M T+S+RVP V +LP G + +I+E++E D+ G KLA MH SD +GFP++ + ++ QIN W+DDW EF+SKHRLG+Q + +Y D + K + L +R F G I+P LLHG+L S N +D+ G V+ DPACY+GH+E E M G F+ Y +++P K+PG+E R LY L+HYLN Y FG G+R + M+++
Sbjct: 79 NSAQRYDTDAGPFFVKTNSRIGPE--MFEGEALGLKAMYDTKSIRVPLPYKVGSLPTG-GSFIIMEFIEFGRSRGDQS-DLGRKLAEMHKAAKSDKGYGFPVDNTIGSTPQINTWTDDWIEFYSKHRLGYQLELASRRYGDSAILEKGQRLIKNIRP-LFDGAVIEPCLLHGDLWSGNISSDSNGDPVILDPACYYGHNEAEFGMSWCAGFG--GDFYNAYFQVMP-KQPGFEKRRDLYLLYHYLNHYNLFGSGYRSSAMSII 333
BLAST of mRNA_S-firma_M_contig938.20353.1 vs. uniprot
Match: UPI000C03D473 (ketosamine-3-kinase-like n=1 Tax=Stylophora pistillata TaxID=50429 RepID=UPI000C03D473) HSP 1 Score: 171 bits (434), Expect = 5.530e-47 Identity = 114/308 (37.01%), Postives = 165/308 (53.57%), Query Frame = 1
Query: 259 KPIGCEEPQHKAFKAE--TKDGQFF-------FVKLDTTGDARAKLDGEVQGLHFMRRTRSVRVPKVIAVTTLPCGPAAALILEYVEMTTMTLDEERKFGTKLARMHMHR--------------GSDH-------FGFPLNTWLETSLQINDWSDDWCEFFSKHRLGHQAQRILEKYEDDKLAAKVEMLRVGLRERFFKGVDIKPSLLHGNLGSQNWGADTTGRAVVCDPACYFGHSEMELAMLTLFGSPCKAGFFVMYHELLPRKEPGYENRMFLYKLHHYLNLYLQFGRGFRGTCMALLNLLLGPS 1092
K + CE+ + F + +GQ F FVKL+T AR DGE Q L + RT ++RVPK I V P G A L+ EY+EM ++ + + GT LAR+H+ G H FGFP T Q N+W DDW F+++ RL Q I ++Y D + + L++ + E +F G+DIKPSLLHG+L S N A+T V DPA ++GH E +LA+ +FG KA F+ YH+L+P KE G+E R LY L H+LN + FG ++ + +++++ LLG S
Sbjct: 15 KELKCEKCESLGFASGGCISEGQSFDIDNGKIFVKLNTKSQAREMFDGEFQSLEEIYRTDTLRVPKPIKVLPHPAGSGAVLVAEYLEMKSLR-NYQSHLGTDLARLHLDNINKLEKETSGESKIGESHNPTTVKKFGFPCTTSCGYIGQNNEWHDDWTSFYTRSRLQCQMDLIDKQYGDTETRSLWTRLKLKIPE-YFNGMDIKPSLLHGDLWSGNV-AETEDGPVAFDPASFYGHHEFDLAIAGMFGGFTKA-FYDAYHKLIP-KEKGFEQRHQLYVLFHHLNHWNHFGTSYKSSSLSIMHGLLGKS 317
BLAST of mRNA_S-firma_M_contig938.20353.1 vs. uniprot
Match: D8SZT1_SELML (Protein-ribulosamine 3-kinase, chloroplastic n=4 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8SZT1_SELML) HSP 1 Score: 169 bits (429), Expect = 1.930e-46 Identity = 95/255 (37.25%), Postives = 146/255 (57.25%), Query Frame = 1
Query: 313 DGQFFFVKLDTTGDARAKLDGEVQGLHFMRRTRSVRVPKVIAVTTLPCGPAAALILEYVEMTTMTLDEERKFGTKLARMHMHRGSDH-FGFPLNTWLETSLQINDWSDDWCEFFSKHRLGHQAQRILEKYEDDKLAAKVEMLRVGLRERFFKGVDIKPSLLHGNLGSQNWGADTTGRAVVCDPACYFGHSEMELAMLTLFGSPCKAGFFVMYHELLPRKEPGYENRMFLYKLHHYLNLYLQFGRGFRGTCMALLN 1074
D FFVK + D+ + + E GL M RT +VRVPK + +LP G + +I+EY+E TL +R+ G L +MH SD FGF ++ + ++ Q N W+ DW FF HR+GHQ + +L Y D ++ K + L + D++P LLHG+L S N D G+ V+ DPACY+GH+E E M + + + F+ Y + +P K+ G+E+R+ LYKL+HYLN Y FG +R C+++++
Sbjct: 45 DAGSFFVKTNRGIDS-SMFEAEAAGLDAMYRTNTVRVPKPLKAGSLPRG-GSFIIMEYIEFGGSTLHGQRELGRMLGKMHKAGISDRGFGFEMDNTIGSTPQPNPWTPDWITFFRDHRIGHQLELLLTNYSDQQIYEKGKKLLEKIPYLLRDLKDVQPCLLHGDLWSGNMAYDKDGKPVILDPACYYGHNEAEFGMS--WCASFNSSFYDAYFKEMP-KQKGFEDRLHLYKLYHYLNHYNLFGSSYRTQCISIIS 294
BLAST of mRNA_S-firma_M_contig938.20353.1 vs. uniprot
Match: A0A6M1ZXQ1_9BACT (Uncharacterized protein n=1 Tax=Chlamydiae bacterium TaxID=2081524 RepID=A0A6M1ZXQ1_9BACT) HSP 1 Score: 169 bits (427), Expect = 2.680e-46 Identity = 94/249 (37.75%), Postives = 142/249 (57.03%), Query Frame = 1
Query: 325 FFVKLDTTGDARAKLDGEVQGLHFMRRTRSVRVPKVIAVTTLPCGPAAALILEYVEMTTMTLDEERKFGTKLARMHMHRGSDHFGFPLNTWLETSLQINDWSDDWCEFFSKHRLGHQAQRILEKYEDDKLAAKVEMLRVGLRERFFKGVDIKPSLLHGNLGSQNWGADTTGRAVVCDPACYFGHSEMELAMLTLFGSPCKAGFFVMYHELLPRKEPGYENRMFLYKLHHYLNLYLQFGRGFRGTCMALL 1071
FFVK+ + D + L+ E +GL M +T++VRVP + + A LI+E++++ + T G LA+MH+H G + +G + + + Q+N W+ W EF+ +RL Q + I EKY D L E L + F G+++KPSLLHG+L N A G VV DPACY+GH E +L+M +FG + FF YHEL+P + PG R+ +Y+L+HYLN YL FG +R C+ ++
Sbjct: 42 FFVKISASRDF-SMLEAEGKGLELMEKTQTVRVPH--SYLSGIKDSTAFLIIEFLDLRSHTSQSHEDLGRGLAQMHLHPGPEDYGLDHDNTIGLTPQVNTWTSSWIEFYRTYRLEFQLRMIEEKYSDTDLLEMAEPLLNRFPD-LFAGLEVKPSLLHGDLWGGNTAALADGTPVVYDPACYYGHHEADLSMTGMFGG-FSSYFFSAYHELIP-ESPGSAERIKVYQLYHYLNHYLLFGSSYRSACVDIM 284
BLAST of mRNA_S-firma_M_contig938.20353.1 vs. uniprot
Match: A0A1B6KN19_9HEMI (Protein-ribulosamine 3-kinase n=5 Tax=Cicadellinae TaxID=33370 RepID=A0A1B6KN19_9HEMI) HSP 1 Score: 167 bits (423), Expect = 1.930e-45 Identity = 103/262 (39.31%), Postives = 148/262 (56.49%), Query Frame = 1
Query: 328 FVKLDTTGDARAKLDGEVQGLHFMRRTRSVRVPKVIAVTTLPCGPAAALILEYVEMTTMTLDEERKFGTKLARMHMHRGS----------DHFGFPLNTWLETSLQINDWSDDWCEFFSKHRLGHQAQRILEKYEDDKLAAKVEMLRVGLRERFFKGVDIKPSLLHGNLGSQNWGADTTGRAVVCDPACYFGHSEMELAMLTLFGSPCKAGFFVMYHELLPRKEPGYENRMFLYKLHHYLNLYLQFGRGFRGTCMALLNLLL 1083
FVK + AR DGE +GL + T +V VPK I V P G A L++E+ EM + ++ G LA++H+H S FGF T Q N W DDW FF+++RL +Q ++LEK + D+ A ++ + FFK ++IKPSLLHG+L S N A+T V+ DPA ++GH E +LA+ +FG F+ YH+L+PR PG+ENR LY+L HYLN + FG G+RG+C++ + LL
Sbjct: 54 FVKSNKKSKARLMFDGEFEGLSAIAATNTVVVPKPIKVLDNPDG-GACLVMEFFEMKGLRRFSQQ-LGDSLAKLHLHNESLRNSKDPSYVKEFGFHTTTCCGYIPQENSWKDDWVSFFAQNRLDYQF-KLLEKEKGDREANELWSRLQIVLPTFFKDLEIKPSLLHGDLWSGN-AAETKTNPVIFDPAAFYGHHEYDLAIAGMFGG-FNRSFYDTYHKLIPRA-PGFENRHKLYQLFHYLNHWNHFGSGYRGSCISTMKSLL 309
BLAST of mRNA_S-firma_M_contig938.20353.1 vs. uniprot
Match: A0A446TMC1_TRITD (Protein-ribulosamine 3-kinase, chloroplastic n=29 Tax=Triticeae TaxID=147389 RepID=A0A446TMC1_TRITD) HSP 1 Score: 167 bits (424), Expect = 2.540e-45 Identity = 103/261 (39.46%), Postives = 147/261 (56.32%), Query Frame = 1
Query: 292 AFKAETKDGQFFFVKLDTTGDARAKLDGEVQGLHFMRRTRSVRVPKVIAVTTLPCGPAAALILEYVEMTTMTLDEERKFGTKLARMHMHRGSDH-FGFPLNTWLETSLQINDWSDDWCEFFSKHRLGHQAQRILEKYEDDKLAAKVEMLRVGLRERFFKGVDIKPSLLHGNLGSQNWGADTTGRAVVCDPACYFGHSEMELAMLTLFGSPCKAGFFVMYHELLPRKEPGYENRMFLYKLHHYLNLYLQFGRGFRGTCMALL 1071
A + +T G FF G A K GE GL M T+S+ VP V +LP G ++ +I+EY++ D+ G KLA MH SD +GF + + ++ QIN W+ DW EF+SKHRLG+Q + I +++ D + K + L + F G I+P LLHG+L S N ADT G V+ DPACY+GH+E E M G + F+ Y E++P K+PG+E R LY L+HYLN Y FG G+R + M+++
Sbjct: 73 AQRYDTDAGSFFVKTSRRIGPAMFK--GEALGLKAMYDTKSIHVPLPYKVGSLPTG-SSFIIMEYIQFGRSRGDQTA-LGRKLAEMHKAAKSDKGYGFYVENTIGSTPQINTWTADWIEFYSKHRLGYQLKLISQRFGDSAIYEKGQQL-IEKMHPLFDGAVIEPCLLHGDLWSGNISADTNGDPVILDPACYYGHNEAEFGMSWCAGFGGE--FYRSYFEVMP-KQPGFEKRRDLYLLYHYLNHYNLFGSGYRSSAMSII 325 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig938.20353.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_M_contig938.20353.1 >prot_S-firma_M_contig938.20353.1 ID=prot_S-firma_M_contig938.20353.1|Name=mRNA_S-firma_M_contig938.20353.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=371bp RGREELPRGEGGSAFGSLHRISRGTAKTSKAKATQTRTRIMSSTTNTFIGback to top mRNA from alignment at S-firma_M_contig938:18522..22867+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_M_contig938.20353.1 ID=mRNA_S-firma_M_contig938.20353.1|Name=mRNA_S-firma_M_contig938.20353.1|organism=Sphaerotrichia firma Sfir_13m male|type=mRNA|length=4346bp|location=Sequence derived from alignment at S-firma_M_contig938:18522..22867+ (Sphaerotrichia firma Sfir_13m male)back to top Coding sequence (CDS) from alignment at S-firma_M_contig938:18522..22867+ >mRNA_S-firma_M_contig938.20353.1 ID=mRNA_S-firma_M_contig938.20353.1|Name=mRNA_S-firma_M_contig938.20353.1|organism=Sphaerotrichia firma Sfir_13m male|type=CDS|length=2226bp|location=Sequence derived from alignment at S-firma_M_contig938:18522..22867+ (Sphaerotrichia firma Sfir_13m male)back to top |