mRNA_S-firma_M_contig937.20336.1 (mRNA) Sphaerotrichia firma Sfir_13m male
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Overview
Homology
BLAST of mRNA_S-firma_M_contig937.20336.1 vs. uniprot
Match: D7FQE8_ECTSI (Adenylate kinase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQE8_ECTSI) HSP 1 Score: 475 bits (1222), Expect = 1.200e-161 Identity = 258/335 (77.01%), Postives = 286/335 (85.37%), Query Frame = 2
Query: 248 ATTDSAFVPPPAGTTCTRGWFGGIQSTKPSAITDNTASISARP---SSAFAPSTSVGVR-TWVPATGASSRAAPARREAMAMDAVGESNAAPKIIIAGAPASGKGTQCSLIKERYGVVHLSTGDMLREAVKNQTPVGMKAKGFMDEGKLVPDEVIIGIVRDRLNEDDCKAHGWLLDGFPRTRAQADALAAEGIKADSFLLLNVPDEMLIQRVVGRRLDPDTGDIYHLDFSPPPAEIVDRLVHRSDDTAEKAQVRLEQYHSNIAAIRECYEDITCSLDGSAGKAEVFEGIAGELDSKLAASAATSVRGGGEGGNVVEEATLPIEGMKPGTSGLRKK 1240
AT DSAFVPP T R WFG + +T+PSA T++ +SARP ++A +P+ +G TWVPAT A+S A ARR MAM+A S+ PKIIIAGAPASGKGTQCS+IKERYGVVHLSTGDMLR AVKNQTPVG++AKG+MDEGKLVPDEVIIGIV+DRLNEDDCK GWLLDGFPRTRAQADALAAEGI+A+SFLLLNVPDEMLI+RVVGRRLDPDTGDIYH+DF+PPPAEIVDRL+ R+DDTAEKAQVRL QYHSNIAAIRECYEDITCSLDGS GK EVF GI ELDS LAA+AA +RGGGEGG VVEEAT PIEGMKPGTSGLRKK
Sbjct: 35 ATADSAFVPP---ATTVRSWFGSVPNTRPSAATESP--VSARPVPPAAACSPAYKLGTASTWVPATRAASSAISARRSGMAMEAAAGSS--PKIIIAGAPASGKGTQCSMIKERYGVVHLSTGDMLRAAVKNQTPVGLEAKGYMDEGKLVPDEVIIGIVKDRLNEDDCKTQGWLLDGFPRTRAQADALAAEGIQANSFLLLNVPDEMLIRRVVGRRLDPDTGDIYHVDFNPPPAEIVDRLIQRADDTAEKAQVRLVQYHSNIAAIRECYEDITCSLDGSVGKEEVFLGITSELDSTLAAAAA--IRGGGEGGRVVEEATEPIEGMKPGTSGLRKK 360
BLAST of mRNA_S-firma_M_contig937.20336.1 vs. uniprot
Match: A0A6V1U1G9_HETAK (Phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1U1G9_HETAK) HSP 1 Score: 468 bits (1204), Expect = 4.930e-151 Identity = 241/443 (54.40%), Postives = 311/443 (70.20%), Query Frame = 2
Query: 509 PKIIIAGAPASGKGTQCSLIKERYGVVHLSTGDMLREAVKNQTPVGMKAKGFMDEGKLVPDEVIIGIVRDRLNEDDCKAHGWLLDGFPRTRAQADALAAEGIKADSFLLLNVPDEMLIQRVVGRRLDPDTGDIYHLDFSPPPAEIVDRLVHRSDDTAEKAQVRLEQYHSNIAAIRECYEDITCSLDGSAGKAEVFEGIAGELDSKLAASAATSVR--------------GGG--------------------EGGNVVEEATLPIEGMKPGTSGLRKKVAVWRDGCYLNNFVQSVLDTFPQEELKGSTIIVSGDGRYYNSAAIQTIIRMAAANGVGRVWVGRGGLMSTPAVSAVLREREGGAAYAGLVLTASHNPGGPDEDFGIKFNTASGSPATEVITDAVYARTLKLKSYRTVIGTPDVDLDAVGKTKVGGMDVEVIDPVE 1735
P+I+I+GAPASGKGTQC L+K++YG+VHLSTGDMLRE VK QT +G A+ +MDEG+LVPDE+II +V++RL + DC A+GWLLDGFPRT AQA AL G+ +F+LL+VPD +L++R +GRR+DP TG IYHL F PPP E+ R+ R+DD A+K RL YH ++ + Y+DI +DG+ K +F I +D ++ ++ GG +G +VE T PI GMKPGTSGLRKKV+V +G YL+NFVQS+ D P +ELKG+T++VSGDGRYYN A+Q I+ +AAANGVGRVW+G+GGLMSTPA SA LR RE GAAY G+VLTASHNPGGPDEDFGIK+NT +G+PATE +TD +Y RTL+++ +T+ P VDLD +G T+VGGM VEVIDPVE
Sbjct: 150 PRILISGAPASGKGTQCELLKDKYGLVHLSTGDMLREEVKKQTFLGRAAQEYMDEGELVPDELIISMVQERLAQADCVANGWLLDGFPRTAAQAQALRDAGVAPTAFVLLDVPDRVLLERAMGRRVDPVTGRIYHLAFDPPPPEVSGRVEQRADDEADKVINRLATYHEHVDNVIFNYKDILTKVDGTQSKEAIFSIIESVVDDNKSSGTKEAIEEVKEFAKEEPQEEVAGGRPDFEPAPAEVEMASSEVLPDGAMIVE--TAPIGGMKPGTSGLRKKVSVVSEGLYLHNFVQSIFDVLPADELKGATLLVSGDGRYYNREALQVIVEIAAANGVGRVWIGKGGLMSTPAASATLRTRENGAAYGGIVLTASHNPGGPDEDFGIKYNTGNGAPATETLTDQIYERTLRIERIKTMKDAPTVDLDTLGTTQVGGMVVEVIDPVE 590
BLAST of mRNA_S-firma_M_contig937.20336.1 vs. uniprot
Match: A0A7S2B3Q2_9STRA (Hypothetical protein n=2 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2B3Q2_9STRA) HSP 1 Score: 462 bits (1189), Expect = 2.710e-150 Identity = 254/459 (55.34%), Postives = 316/459 (68.85%), Query Frame = 2
Query: 383 AFAPSTSVGVRT---WVPATGASSRAAPARREAMAMD---AVGESNAAPKIIIAGAPASGKGTQCSLIKERYGVVHLSTGDMLREAVKNQTPVGMKAKGFMDEGKLVPDEVIIGIVRDRLNEDDCKAHGWLLDGFPRTRAQADALAAEGIKADSFLLLNVPDEMLIQRVVGRRLDPDTGDIYHLDFSPPP-AEIVDRLVHRSDDTAEKAQVRLEQYHSNIAAIRECYEDITCSLDGSAGKAEVFEGIAGELDSKLAASAATSVRGGGEGGNVVEEATLPIEGMKPGTSGLRKKVAVWR-DGCYLNNFVQSVLDTFPQEELKGSTIIVSGDGRYYNSAAIQTIIRMAAANGVGRVWVGRGGLMSTPAVSAVLREREGGAAYAGLVLTASHNPGGPDEDFGIKFNTASGSPATEVITDAVYARTLKLKSYRTVIGTPDVDLDAVGKTKVGGMDVEVIDPVE 1735
AFAPS+ V R+ W GA + AP R +A + V + + IIIAGAPASGKGTQC+ I E +GVVHLSTGD+LR AV + +G +AKGFMD GKLVPD+++I ++ ++L DDCK GWLLDGFPRT AQA ALA G K D F+ LNVPD L+ RVVGRR DP+TGDIYH+ F+PPP EI DR RSDDT EK +VRLEQ+H N+ A+ + Y+D+ +DG+A EV+ I LD+ A SV T PIEGMK GTSGLRKKV V + D YL NFVQS+ D P++++ G T++V GDGRYYN A+QTIIRMAAANGVGRVWVG+ GL+STPAVSA++RER GAA+ +VLTASHNPGGPD DFGIK+NT G+PA E++T++VY T K+ + +VDL VG + VG M VEVIDPV+
Sbjct: 19 AFAPSSWVSTRSTTKW----GARVQQAPQPRTGLAQNECLVVMSAGSGMGIIIAGAPASGKGTQCARITEDFGVVHLSTGDLLRAAVAAGSDLGKEAKGFMDSGKLVPDQLVIDLIAEKLKSDDCKTKGWLLDGFPRTAAQAQALADTGAKCDCFISLNVPDSDLVDRVVGRRTDPETGDIYHMTFNPPPEGEIADRCTQRSDDTEEKVKVRLEQFHDNVNAVVDFYKDVKTEVDGTAKPDEVYTTIKSTLDAATTKVPAVSVP------------TSPIEGMKMGTSGLRKKVPVVKGDPMYLKNFVQSIFDALPKDDILGGTLVVGGDGRYYNKEALQTIIRMAAANGVGRVWVGKEGLISTPAVSAIVRERGAGAAFGAIVLTASHNPGGPDGDFGIKYNTGDGAPAKELLTESVYDFTTKITRVLDLEDAEEVDLGTVGTSTVGNMVVEVIDPVD 461
BLAST of mRNA_S-firma_M_contig937.20336.1 vs. uniprot
Match: D7FQE9_ECTSI (Phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQE9_ECTSI) HSP 1 Score: 310 bits (794), Expect = 3.060e-94 Identity = 159/178 (89.33%), Postives = 165/178 (92.70%), Query Frame = 2
Query: 1202 EGMKPGTSGLRKKVAVWRDGCYLNNFVQSVLDTFPQEELKGSTIIVSGDGRYYNSAAIQTIIRMAAANGVGRVWVGRGGLMSTPAVSAVLREREGGAAYAGLVLTASHNPGGPDEDFGIKFNTASGSPATEVITDAVYARTLKLKSYRTVIGTPDVDLDAVGKTKVGGMDVEVIDPVE 1735
EG K G KKVAVW++GCYLNNFVQ VLDTFPQEELKGSTIIVSGDGR+YN AIQTIIRMAAANGVGRVWVG+GGLMSTPAVSAVLREREGGAAYAGLVLTASHNPGGPDEDFGIKFNTASGSPATEVITDAVYARTL+LKSYRTV GTPDV+LD VGKTKV GMDVEVIDPVE
Sbjct: 44 EGKKTGA----KKVAVWKEGCYLNNFVQGVLDTFPQEELKGSTIIVSGDGRFYNPPAIQTIIRMAAANGVGRVWVGKGGLMSTPAVSAVLREREGGAAYAGLVLTASHNPGGPDEDFGIKFNTASGSPATEVITDAVYARTLELKSYRTVEGTPDVNLDVVGKTKVAGMDVEVIDPVE 217
BLAST of mRNA_S-firma_M_contig937.20336.1 vs. uniprot
Match: A0A7S4AR35_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AR35_9STRA) HSP 1 Score: 280 bits (715), Expect = 1.300e-86 Identity = 144/223 (64.57%), Postives = 172/223 (77.13%), Query Frame = 2
Query: 470 AMAMDAVGESNAAPKIIIAGAPASGKGTQCSLIKERYGVVHLSTGDMLREAVKNQTPVGMKAKGFMDEGKLVPDEVIIGIVRDRLNEDDCKAHGWLLDGFPRTRAQADALAAEGIKADSFLLLNVPDEMLIQRVVGRRLDPDTGDIYHLDFSPPPAE---IVDRLVHRSDDTAEKAQVRLEQYHSNIAAIRECYEDITCSLDGSAGKAEVFEGIAGELDSKLA 1129
A A D+ GES+ A IIIAGAPASGKGTQC +IKE YG+VHLSTGDMLR AV T VG+KAK +MD GKLVPDEVIIGI+RDRL E+DCK GWLLDGFPRT AQA ALA G KAD FL L+VPDE+L++RVVGRR DP+TG IYH+ FSPP AE ++ RL HRSDDT EK VRLEQ+H+N+AA++ YEDI S+DG+ +V + I+ + + LA
Sbjct: 70 AEATDSDGESSNAVNIIIAGAPASGKGTQCEIIKEEYGIVHLSTGDMLRAAVAAGTDVGVKAKEYMDGGKLVPDEVIIGIIRDRLEEEDCKTQGWLLDGFPRTAAQAAALAEAGCKADCFLFLDVPDEILVERVVGRRTDPETGKIYHMTFSPPDAEDEALIARLEHRSDDTEEKVVVRLEQFHTNVAAVKGSYEDIMVSIDGNRSPTDVSKDISESISAALA 292
BLAST of mRNA_S-firma_M_contig937.20336.1 vs. uniprot
Match: A0A7S3Y521_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y521_HETAK) HSP 1 Score: 275 bits (704), Expect = 4.810e-85 Identity = 140/205 (68.29%), Postives = 164/205 (80.00%), Query Frame = 2
Query: 494 ESNAAPKIIIAGAPASGKGTQCSLIKERYGVVHLSTGDMLREAVKNQTPVGMKAKGFMDEGKLVPDEVIIGIVRDRLNEDDCKAHGWLLDGFPRTRAQADALAAEGIKADSFLLLNVPDEMLIQRVVGRRLDPDTGDIYHLDFSPPP--AEIVDRLVHRSDDTAEKAQVRLEQYHSNIAAIRECYEDITCSLDGSAGKAEVFEGI 1102
E A KIIIAGAPASGKGTQC ++K GVVHLSTGDMLREAV TPVG +A+ +M+ G+LVPDEVIIGIV+DRL E+DC+ GWLLDGFPRTRAQADALA G+ AD F+LL VPDEMLI+RVVGRRLDP+TG IYHL F PPP AE++ RLVHR+DDT EKA+VRL QYH+NI AI CY DI +DG+ K +V++ I
Sbjct: 80 EKKLANKIIIAGAPASGKGTQCEMLKTDLGVVHLSTGDMLREAVAKGTPVGKQAQEYMESGRLVPDEVIIGIVKDRLAEEDCQTQGWLLDGFPRTRAQADALAEAGVAADRFVLLEVPDEMLIERVVGRRLDPETGAIYHLLFFPPPEDAEVLARLVHRADDTEEKARVRLGQYHANIDAIIGCYGDILQKIDGTQAKTDVYQAI 284
BLAST of mRNA_S-firma_M_contig937.20336.1 vs. uniprot
Match: A0A448ZNY4_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZNY4_9STRA) HSP 1 Score: 275 bits (703), Expect = 7.720e-85 Identity = 142/221 (64.25%), Postives = 171/221 (77.38%), Query Frame = 2
Query: 485 AVGESNAAPK---IIIAGAPASGKGTQCSLIKERYGVVHLSTGDMLREAVKNQTPVGMKAKGFMDEGKLVPDEVIIGIVRDRLNEDDCKAHGWLLDGFPRTRAQADALAAEGIKADSFLLLNVPDEMLIQRVVGRRLDPDTGDIYHLDFSPPPA---EIVDRLVHRSDDTAEKAQVRLEQYHSNIAAIRECYEDITCSLDGSAGKAEVFEGIAGELDSKLA 1129
AVG+ ++A IIIAGAPASGKGTQC +IKE + VVHLSTGDMLR AV T VG+KAK +MD GKLVPDEVIIGI+RDRL EDDCK GWLLDGFPRT AQA+ALA G AD FL L+VPDE+L++RVVGRR DP+TG IYH+ FSPPPA E++ RL HRSDDT EK VRLEQ+H+N+AA++ YEDI S+DG+ A+V + I +++ LA
Sbjct: 71 AVGDDSSAGSPVNIIIAGAPASGKGTQCEIIKEEFSVVHLSTGDMLRAAVAAGTDVGVKAKEYMDGGKLVPDEVIIGIIRDRLEEDDCKTQGWLLDGFPRTAAQAEALAEAGCTADCFLFLDVPDEILVERVVGRRTDPETGKIYHMTFSPPPADDEELIARLEHRSDDTEEKVVVRLEQFHTNVAAVKGSYEDIMVSIDGNRAPADVSKDITESINAALA 291
BLAST of mRNA_S-firma_M_contig937.20336.1 vs. uniprot
Match: A0A7S1XXP2_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XXP2_9STRA) HSP 1 Score: 270 bits (690), Expect = 4.090e-83 Identity = 135/199 (67.84%), Postives = 161/199 (80.90%), Query Frame = 2
Query: 509 PKIIIAGAPASGKGTQCSLIKERYGVVHLSTGDMLREAVKNQTPVGMKAKGFMDEGKLVPDEVIIGIVRDRLNEDDCKAHGWLLDGFPRTRAQADALAAEGIKADSFLLLNVPDEMLIQRVVGRRLDPDTGDIYHLDFSPPPAE-IVDRLVHRSDDTAEKAQVRLEQYHSNIAAIRECYEDITCSLDGSAGKAEVFEGI 1102
P+IIIAGAPASGKGTQC++IK+ VHLSTGDMLR AV+ T VG AKG+M+ G+LVPD+VIIGIV++RL E DC+A GWLLDGFPRT+AQADALA GI AD+FLLLNVPD+ LI+RVVGRRLDP+TGDIYH+ +SPPP E I R+ RSDDT EKA+VRLE YH NI AIR+ Y+ I +DG KAEVF+ +
Sbjct: 73 PRIIIAGAPASGKGTQCAMIKDSLNCVHLSTGDMLRAAVEAGTEVGKLAKGYMESGQLVPDDVIIGIVKERLAEPDCQAQGWLLDGFPRTKAQADALAEAGIVADTFLLLNVPDDELIERVVGRRLDPETGDIYHMKYSPPPTEEIAARVTQRSDDTEEKARVRLESYHKNIEAIRDSYKPILKEIDGCRSKAEVFDDV 271
BLAST of mRNA_S-firma_M_contig937.20336.1 vs. uniprot
Match: A0A7S4N1J4_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4N1J4_9STRA) HSP 1 Score: 266 bits (680), Expect = 2.500e-82 Identity = 136/208 (65.38%), Postives = 162/208 (77.88%), Query Frame = 2
Query: 512 KIIIAGAPASGKGTQCSLIKERYGVVHLSTGDMLREAVKNQTPVGMKAKGFMDEGKLVPDEVIIGIVRDRLNEDDCKAHGWLLDGFPRTRAQADALAAEGIKADSFLLLNVPDEMLIQRVVGRRLDPDTGDIYHLDFSPPP-AEIVDRLVHRSDDTAEKAQVRLEQYHSNIAAIRECYEDITCSLDGSAGKAEVFEGIAGELDSKLAA 1132
KIIIAGAPASGKGTQC +IKE+YGVVHLSTGDMLR AV T VG +AK FMD GKLVPDEVIIG+V+DRL + DCK+ GWLLDGFPRT AQA+ALA+ G+ AD FL LNVPD+ML+ RV GRR DP TG IYH+ FSPP E++ RL RSDDT EK +VRLEQ+H+N+ A++ Y +I +DGS EV E IA L++K+AA
Sbjct: 23 KIIIAGAPASGKGTQCEVIKEKYGVVHLSTGDMLRAAVAEGTEVGKQAKDFMDAGKLVPDEVIIGVVKDRLEQSDCKSCGWLLDGFPRTPAQAEALASAGVSADCFLFLNVPDDMLVDRVCGRRTDPVTGKIYHMTFSPPDDEEVLARLEQRSDDTEEKVKVRLEQFHANVDAVKGNYVEIGVEIDGSKKPGEVTEVIAAALEAKVAA 230
BLAST of mRNA_S-firma_M_contig937.20336.1 vs. uniprot
Match: A0A8J5XQ85_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XQ85_DIALT) HSP 1 Score: 265 bits (677), Expect = 2.550e-81 Identity = 138/231 (59.74%), Postives = 167/231 (72.29%), Query Frame = 2
Query: 455 PARREAMAMDAVGESNAAP----KIIIAGAPASGKGTQCSLIKERYGVVHLSTGDMLREAVKNQTPVGMKAKGFMDEGKLVPDEVIIGIVRDRLNEDDCKAHGWLLDGFPRTRAQADALAAEGIKADSFLLLNVPDEMLIQRVVGRRLDPDTGDIYHLDFSPPPAEIVDRLVHRSDDTAEKAQVRLEQYHSNIAAIRECYEDITCSLDGSAGKAEVFEGIAGELDSKLAAS 1135
PAR A A A P K+IIAGAPASGKGTQC LIK + G+VHLSTGDMLR AV+ T VG+ AK +MD GKLVPDEVII +VR+RL + DC+A+GWLLDGFPRT QA AL A I+ D L LNVPD MLI+RVVGRRLDP+TG IYHL F PPP+++V R+ HRSDDTAEKAQVRL Q+H ++ AI Y+ +T +DG+ GK +VF I+ L+ A+
Sbjct: 39 PARSSAFARMEASRGGAMPRAARKVIIAGAPASGKGTQCELIKSQLGLVHLSTGDMLRAAVQAGTKVGLAAKEYMDGGKLVPDEVIIDLVRERLAQPDCEANGWLLDGFPRTAVQAAALRAAQIEPDLVLYLNVPDSMLIERVVGRRLDPETGRIYHLTFDPPPSDVVPRMTHRSDDTAEKAQVRLSQFHEHLGAILAAYQSVTVEIDGTRGKQDVFASISRVLEGSAIAA 269 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig937.20336.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_M_contig937.20336.1 >prot_S-firma_M_contig937.20336.1 ID=prot_S-firma_M_contig937.20336.1|Name=mRNA_S-firma_M_contig937.20336.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=532bp MPSPRVRTSSTWSLALILLSLAGCRTAAFASAGAGDATTDSAFVPPPAGTback to top mRNA from alignment at S-firma_M_contig937:546..10124- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_M_contig937.20336.1 ID=mRNA_S-firma_M_contig937.20336.1|Name=mRNA_S-firma_M_contig937.20336.1|organism=Sphaerotrichia firma Sfir_13m male|type=mRNA|length=9579bp|location=Sequence derived from alignment at S-firma_M_contig937:546..10124- (Sphaerotrichia firma Sfir_13m male)back to top Coding sequence (CDS) from alignment at S-firma_M_contig937:546..10124- >mRNA_S-firma_M_contig937.20336.1 ID=mRNA_S-firma_M_contig937.20336.1|Name=mRNA_S-firma_M_contig937.20336.1|organism=Sphaerotrichia firma Sfir_13m male|type=CDS|length=3192bp|location=Sequence derived from alignment at S-firma_M_contig937:546..10124- (Sphaerotrichia firma Sfir_13m male)back to top |