mRNA_S-firma_M_contig9366.20333.1 (mRNA) Sphaerotrichia firma Sfir_13m male
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Overview
Homology
BLAST of mRNA_S-firma_M_contig9366.20333.1 vs. uniprot
Match: A0A6H5L8G8_9PHAE (Nudix hydrolase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8G8_9PHAE) HSP 1 Score: 199 bits (505), Expect = 1.050e-60 Identity = 96/113 (84.96%), Postives = 103/113 (91.15%), Query Frame = 2
Query: 5 DCPKRWAGGSSKTHEGSCWCGWDGYCMCTPSLAIDTVVEVTSPASEKVESVLVVRRKDNGKLACIGGFVEVGETLEEATRREVMEETGLAVTSLQMLPRVYDDPARDPRRHTV 343
DCP++W G +SKTH GSCWCGWD YCMCTPSLAIDTVVEV+ PA+ +V SVLVVRRKDNGKLACIGGFVEVGETLEEATRREV EETGL VTSLQMLPR+YDDPARD RRHTV
Sbjct: 56 DCPRQWHG-ASKTHAGSCWCGWDEYCMCTPSLAIDTVVEVSDPATGEVGSVLVVRRKDNGKLACIGGFVEVGETLEEATRREVREETGLEVTSLQMLPRMYDDPARDARRHTV 167
BLAST of mRNA_S-firma_M_contig9366.20333.1 vs. uniprot
Match: D7FNI6_ECTSI (MutT-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNI6_ECTSI) HSP 1 Score: 151 bits (381), Expect = 5.760e-43 Identity = 76/87 (87.36%), Postives = 81/87 (93.10%), Query Frame = 2
Query: 83 MCTPSLAIDTVVEVTSPASEKVESVLVVRRKDNGKLACIGGFVEVGETLEEATRREVMEETGLAVTSLQMLPRVYDDPARDPRRHTV 343
MCTPSLAIDTVVEV+ PA+ +V SVLVVRRKDNGKLACIGGFVEVGETLEEATRREV EETGL VTSLQMLP++YDDPARD RRHTV
Sbjct: 1 MCTPSLAIDTVVEVSDPATGEVGSVLVVRRKDNGKLACIGGFVEVGETLEEATRREVREETGLEVTSLQMLPQMYDDPARDARRHTV 87
BLAST of mRNA_S-firma_M_contig9366.20333.1 vs. uniprot
Match: A0A835YUT6_9STRA (NUDIX hydrolase domain-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUT6_9STRA) HSP 1 Score: 146 bits (369), Expect = 1.510e-40 Identity = 73/112 (65.18%), Postives = 89/112 (79.46%), Query Frame = 2
Query: 8 CPKRWAGGSSKTHEGSCWCGWDGYCMCTPSLAIDTVVEVTSPASEKVESVLVVRRKDNGKLACIGGFVEVGETLEEATRREVMEETGLAVTSLQMLPRVYDDPARDPRRHTV 343
CP +AGGS + +GSCWCG D YCMCTPSLAIDT+VE+ AS ++ ++VVRRKD GK A +GGFV+VGET+EEA REV EETGLAV L++LPR+Y DP+RD RRHTV
Sbjct: 79 CPHWFAGGSPR-FKGSCWCGKDDYCMCTPSLAIDTIVEMVD-ASGVIKGLVVVRRKDVGKYALVGGFVDVGETVEEAVHREVKEETGLAVWDLRLLPRIYSDPSRDVRRHTV 188
BLAST of mRNA_S-firma_M_contig9366.20333.1 vs. uniprot
Match: A0A7S2CUW8_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CUW8_9STRA) HSP 1 Score: 126 bits (316), Expect = 4.250e-33 Identity = 70/129 (54.26%), Postives = 82/129 (63.57%), Query Frame = 2
Query: 8 CPKRWAGGS-SKTHEGSCWCGWDGYCMCTPSLAIDTVVEVTSPASEKVESVLVVRRKDNGKLACIGGFVEVGETLEEATRREVMEETGLAVTSLQMLPRVYDDPARDPRRHTVRGT-----NEKIISGD 376
CP W GG+ S GSCWCG D YCMCTPSLAID V+E T P E +V++V R DNG A +GGFV+VGET+E A RE+MEETGL + S L V+ DP RD RRHTV KI +GD
Sbjct: 31 CPYVWNGGAPSDAPVGSCWCGQDNYCMCTPSLAIDLVIESTLPNGEP--AVVLVERADNGLFATMGGFVDVGETVETAVARELMEETGLELASPPSLLGVWSDPRRDKRRHTVSAVFVAPGKGKIRAGD 157
BLAST of mRNA_S-firma_M_contig9366.20333.1 vs. uniprot
Match: A0A8J2S8F7_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2S8F7_9STRA) HSP 1 Score: 111 bits (277), Expect = 2.830e-27 Identity = 61/113 (53.98%), Postives = 73/113 (64.60%), Query Frame = 2
Query: 8 CPKRWAGGS-SKTHEGSCWCGWDGYCMCTPSLAIDTVVEVTSPASEKVESVLVVRRKDNGKLACIGGFVEVGETLEEATRREVMEETGLAVTSLQMLPRVYDDPARDPRRHTV 343
CP W GG+ S GSCW G DGY MCTPSLAID V+E A V++VRR DNGK A +GGFV+VGE +A RE+ EET L + + +L V+ DP RDPRRHTV
Sbjct: 35 CPYVWHGGAPSGEPRGSCWVGNDGYAMCTPSLAIDLVIESGDDA------VVLVRRGDNGKYATMGGFVDVGEDPRDAVARELREETALELAAPPLLLGVFGDPRRDPRRHTV 141
BLAST of mRNA_S-firma_M_contig9366.20333.1 vs. uniprot
Match: A0A1Z5JSC3_FISSO (Nudix hydrolase domain-containing protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JSC3_FISSO) HSP 1 Score: 109 bits (273), Expect = 2.150e-26 Identity = 62/123 (50.41%), Postives = 77/123 (62.60%), Query Frame = 2
Query: 14 KRWAGGS-SKTHEGSCWCG-WDGYCMCTPSLAIDTVVEVTSPASEKVESVLVVRRKDNGKLACIGGFVEVGETLEEATRREVMEETGL-AVTSLQMLPRVYDDPARDPRRHTVRGTNEKIISG 373
+ W GG S H GSCWCG DGYC+CTPSLAID VV + V +VRRKD +LA +GGFV++GE++EEA RE+ EETG+ + S L +Y DP RD RRHTV T + G
Sbjct: 57 REWHGGHPSDAHAGSCWCGDTDGYCLCTPSLAIDLVVMTGR------DHVWLVRRKDTSQLATVGGFVQMGESVEEAVLRELAEETGIKTIPSRPRLIGIYSDPRRDNRRHTVSVTYAIHLDG 173
BLAST of mRNA_S-firma_M_contig9366.20333.1 vs. uniprot
Match: A0A7S2DR83_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DR83_9STRA) HSP 1 Score: 100 bits (250), Expect = 3.750e-24 Identity = 54/99 (54.55%), Postives = 65/99 (65.66%), Query Frame = 2
Query: 50 GSCWCGWDGYCMCTPSLAIDTVVEVTSPASEKVESVLVVRRKDNGKLACIGGFVEVGETLEEATRREVMEETGLAVTSLQM-LPRVYDDPARDPRRHTV 343
G+C C + YC+CTPSLAID +VEV S S+++VRR DNGK A IGGFVEVGE +EE RE+ EETGL + L +Y DP RD RRHT
Sbjct: 30 GNCLCNTEDYCLCTPSLAIDVIVEVPSG------SIVLVRRADNGKYATIGGFVEVGEAVEETVARELWEETGLTLLPGSAGLVGLYSDPRRDHRRHTA 122
BLAST of mRNA_S-firma_M_contig9366.20333.1 vs. uniprot
Match: F0Y7B7_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y7B7_AURAN) HSP 1 Score: 104 bits (260), Expect = 7.290e-23 Identity = 59/124 (47.58%), Postives = 72/124 (58.06%), Query Frame = 2
Query: 8 CPKRWAGGSSKTHE-GSCWCGWDGYCMCTPSLAIDTVVEVTSPASEKVESVLVVRRKDNGKLACIGGFVEVGETLEEATRREVMEETGLAVTSLQMLPRVYDDPARDPRRHTVRGTNEKIISGD 376
CP W GG+ GSCW G DGY MCTPSLAID V+E + V++VRR DNGK A +GGFV+VGE +A RE+ EET L + L V+ DP RD RRHTV +G+
Sbjct: 29 CPYVWHGGAPGGEPAGSCWAGPDGYAMCTPSLAIDLVIESGD------DGVVLVRRGDNGKYATMGGFVDVGELPRDAVARELREETNLELVGEPELLGVFGDPRRDERRHTVSAVYVARTAGE 146
BLAST of mRNA_S-firma_M_contig9366.20333.1 vs. uniprot
Match: A0A4D9CWE2_9STRA (Nudix hydrolase domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CWE2_9STRA) HSP 1 Score: 97.8 bits (242), Expect = 6.970e-22 Identity = 47/106 (44.34%), Postives = 67/106 (63.21%), Query Frame = 2
Query: 29 GSSKTHEGSCWCGW-DGYCMCTPSLAIDTVVEVTSPASEKVESVLVVRRKDNGKLACIGGFVEVGETLEEATRREVMEETGLAVTSLQMLPRVYDDPARDPRRHTV 343
G S TH+GSC+C D +C+C PS+A+D ++E + V +++ ++R+D AC+GGFV++GET EEA +REV EE G L VY P RD RRHT+
Sbjct: 71 GVSPTHKGSCFCSAKDDFCLCGPSVAVDAILEYSETKEGPVTALVFIKRRDRSITACVGGFVQLGETTEEALQREVQEEIGTNTLHSVRLIGVYSHPDRDDRRHTI 176
BLAST of mRNA_S-firma_M_contig9366.20333.1 vs. uniprot
Match: A0A7S4DXA7_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S4DXA7_9EUKA) HSP 1 Score: 97.1 bits (240), Expect = 1.520e-21 Identity = 59/131 (45.04%), Postives = 79/131 (60.31%), Query Frame = 2
Query: 8 CPKR----WAGGSSKTHEGSCWCGWDGYCMCTPSLAIDTVVEVT---SPASEKVESVLVVRRKDNGKL-ACIGGFVEVGETLEEATRREVMEETGLAVTSLQ--MLPRVYDDPARDPRRHTVRGTNEKIIS 370
CP R + GG +T+ G+C CG DGYCMC PSLA D ++EV +++ + VLVVR+ L A +GGFVEVGET+E A REV+EE L ++ + L V +P RD RRHTV + +IS
Sbjct: 60 CPLRIRSVFHGGDPRTNNGTCVCGADGYCMCGPSLASDAIIEVRHQDDSNAQEADVVLVVRKDPPKDLHAIVGGFVEVGETIENAVEREVLEEANLHISVEKDCQLFSVESNPKRDLRRHTVSVVHHCVIS 190 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig9366.20333.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_M_contig9366.20333.1 >prot_S-firma_M_contig9366.20333.1 ID=prot_S-firma_M_contig9366.20333.1|Name=mRNA_S-firma_M_contig9366.20333.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=135bp ERLPEAVGRGIIQDTRGVVLVRVGRVLHVHSELGHRHRGGGHESCLGKGGback to top mRNA from alignment at S-firma_M_contig9366:103..2289- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_M_contig9366.20333.1 ID=mRNA_S-firma_M_contig9366.20333.1|Name=mRNA_S-firma_M_contig9366.20333.1|organism=Sphaerotrichia firma Sfir_13m male|type=mRNA|length=2187bp|location=Sequence derived from alignment at S-firma_M_contig9366:103..2289- (Sphaerotrichia firma Sfir_13m male)back to top Coding sequence (CDS) from alignment at S-firma_M_contig9366:103..2289- >mRNA_S-firma_M_contig9366.20333.1 ID=mRNA_S-firma_M_contig9366.20333.1|Name=mRNA_S-firma_M_contig9366.20333.1|organism=Sphaerotrichia firma Sfir_13m male|type=CDS|length=810bp|location=Sequence derived from alignment at S-firma_M_contig9366:103..2289- (Sphaerotrichia firma Sfir_13m male)back to top |