mRNA_S-firma_M_contig9362.20331.1 (mRNA) Sphaerotrichia firma Sfir_13m male
|
Overview
Homology
BLAST of mRNA_S-firma_M_contig9362.20331.1 vs. uniprot
Match: A0A6H5KZD6_9PHAE (Palmitoyltransferase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZD6_9PHAE) HSP 1 Score: 305 bits (781), Expect = 2.220e-96 Identity = 185/336 (55.06%), Postives = 212/336 (63.10%), Query Frame = 3
Query: 3 YRLGYVAVNASAVLVVGNVPGTFLWDPEAGETADGEAFAIFLAAVAISVFAFLMIQGSNPGYLSTDRNMGGFGDLAEGEDAELLVPEAVAVTGTESQRRHRADAEDPGAARQQXXXXXXXXXXXXRYPAPTEETRRTERPKGGGVGGSINSSGSVDSSDRCVSGGGGGLPRRGDFVRCARCDGLQVPLRSHHCRQCGRCVATFDXXXXXXXXXXGERNHCRFWWFLLAQTVSLVEAVRITASGFSETDG-------SPDRGE---------TSIPGRWASRNASALVASLCLWPCLVLAVVLLGTHTWMATSSLTSYECLKGGGRGSDSLSYLEVI 962
YR GY+AVN +AV+++GN+PGTFLWD EAGE DGE F++FLAAVA+S+ AFL +QGSNPGYL R+ G G E+ L E V + H D E A + P EE + TE G SIN++ V GG G R DFVRC RC ++VPLRSHHCR CGRCVATFDXXXXXXXXXXGERNHCRFWWFLLAQTVSL EA+RIT SGFS+ DG SP GE T+ G WASRNA AL S CLWPC L+VVLL TH+WMA SSLTSYECL+GGGRG DSL YLEV+
Sbjct: 17 YRSGYLAVNGAAVVLIGNIPGTFLWDQEAGEAVDGETFSVFLAAVALSILAFLAVQGSNPGYLFVQRDWVGDGGTEAEEETTCLTAEPV------QHQSHTHDQEKGEEAGEARLLTSTITSRDHASKKPVEEGQPTE---GNEKSSSINTA--------SVVGGFEGSLTRPDFVRCRRCQDMEVPLRSHHCRACGRCVATFDXXXXXXXXXXGERNHCRFWWFLLAQTVSLAEAIRITMSGFSD-DGDRYSFTLSPAVGEAGATTPTESTTAEGSWASRNALALACSCCLWPCFALSVVLLVTHSWMAISSLTSYECLRGGGRGPDSLEYLEVL 334
BLAST of mRNA_S-firma_M_contig9362.20331.1 vs. uniprot
Match: D7FP12_ECTSI (Palmitoyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP12_ECTSI) HSP 1 Score: 179 bits (455), Expect = 9.310e-51 Identity = 119/245 (48.57%), Postives = 143/245 (58.37%), Query Frame = 3
Query: 3 YRLGYVAVNASAVLVVGNVPGTFLWDPEAGETADGEAFAIFLAAVAISVFAFLMIQGSNPGYLSTDRNMGGFGDLAEGEDAELLVPEAVAVTGT-ESQRRHRADAEDPGAARQQXXXXXXXXXXXXRYPA-PTEETRRTERPKGGGVGGSINSSGSVDSSDRCVSGGGGGLPRRGDFVRCARCDGLQVPLRSHHCRQCGRCVATFDXXXXXXXXXXGERNHCRFWWFLLAQTVSLVEAVRITASG 731
YR GY+AVN +AV+++GN+PGTFLWD EAGE DGEAF++FLAAV +S+ AFL +QGSNPGYLS R+ GD G +AE E +T T E Q E+ G + P P EE + TE N S+ ++ V G G L R DFVRC RC ++VPLRSHHCR+CGRCVATFDXXXXXXXXXXGERNHCRFWW + T T G
Sbjct: 17 YRSGYLAVNGAAVVLIGNIPGTFLWDQEAGEAVDGEAFSVFLAAVVLSILAFLAVQGSNPGYLSVQRDW--VGD--SGTEAE---EETTCLTATPEVQHHSHPHDEEKGEQSGEARLLTSTITSSDHAPKKPVEEGQPTEG----------NDKSSIINTPSVVGGFEGSLTRP-DFVRCRRCQDMKVPLRSHHCRECGRCVATFDXXXXXXXXXXGERNHCRFWWEQESSTCRSARGFWATCGG 243
BLAST of mRNA_S-firma_M_contig9362.20331.1 vs. uniprot
Match: A0A6U5KJH5_9STRA (Palmitoyltransferase n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A6U5KJH5_9STRA) HSP 1 Score: 110 bits (275), Expect = 2.680e-23 Identity = 97/334 (29.04%), Postives = 148/334 (44.31%), Query Frame = 3
Query: 15 YVAVNASAVLVVGNVPGTFLW------DPEAGETADGEAFAIFLAAVAISVFAFLMIQGSNPGYL--STDRNMG---GFGDLA---EGEDAELLVPEAVAVT--GTESQRRHRADAEDPGAARQQXXXXXXXXXXXXRYPAPTEETRRTERPKGGGVGGSINSSGSVDSSDRCVSGGGG-GLPRRGDFVR--CARCDGLQVPLRSHHCRQCGRCVATFDXXXXXXXXXXGERNHCRFWWFLLAQTVSLVEAVRITASGFSETDGSPDRGETSIPGRWASRNASALV--ASLCLWPCLVLAVVLLGTHTWMATSSLTSYECLKGGGRGSDSLSYL 953
Y+++ A V++ +VP T LW +P++ ET + E A + + + +FL++ GS+PGYL +T +G G G L G+D L + ++ G+ S R P + P +++++ + P ++ S S R V LP R C RC PLR+HHC+ C RCVATFD GERNHCRFWWFL Q + + + I S G D E R+ N LV S+ LW ++ A+++ TH++ A S+ TS+EC G+G + YL
Sbjct: 28 YLSLVAVTVILTSSVPRTRLWNGGDIGEPQSFETLNNETLADLVFTTLLLIVSFLLLNGSDPGYLDIATMEELGKIDGIGLLGGRISGDDDGLHPESGIEMSEIGSSSTNPDRHCLLVPSVS----SVPTASLEFESVVPISSDQSQPSTAPGASRRPAAVRDSIRARSDRRRVMRAEALALPPHASTRRGVCDRCH-FAPPLRAHHCKHCDRCVATFDHHCFLIGTCIGERNHCRFWWFLTFQLLGFMTCISILNSRVDGYRGGDDTQEYVKEDRFFFFNDQLLVIVVSIYLWALMITAMIMWVTHSFFAISNYTSFEC----GKGPAYIDYL 352
BLAST of mRNA_S-firma_M_contig9362.20331.1 vs. uniprot
Match: A0A2R5GTB8_9STRA (Palmitoyltransferase n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GTB8_9STRA) HSP 1 Score: 100 bits (250), Expect = 4.420e-20 Identity = 92/318 (28.93%), Postives = 135/318 (42.45%), Query Frame = 3
Query: 3 YRLGYVAVNASAVLVVGNVPGTFLWDPEAGETADGEAFAIFLAAVAISVFAFLMIQGSNPGYLSTDRNMGGFGDLAEGEDAELLVPEAVAVTGTESQRRHRADAEDPGAARQQXXXXXXXXXXXXRYPAPTEETRRTERPKGGGVGGSINSSGSVDSSDRCVSGGGGGLPRRGDFVRCARCDGLQVPLRSHHCRQCGRCVATFDXXXXXXXXXXGERNHCRFWWFLLAQTVSLVEAVRITASGFSETDGSPDRGETSIPGRWASRNASALVASLCLWPCLVLAVVLLGTHTWMATSSLTSYECLKGGGRGSDSLSYLE 956
YR Y+ + A+ V P FL D A G+ A+ + V +++ +F+ +QGSNPG++ D M G A+GE A L P + TE H +AR+ +E +G + + ++D S G R +VP+R+ CR R VAT+D GE+NHCRFWWFLL T+ L R+ SGF +T + E G W N AL+ L + L LL HT++A +++TSYE L+ +D +SYLE
Sbjct: 66 YRAAYLVIIAALCAAVLTTPRIFLRD--ANGDLQGDDLAMLILLVLLALGSFMAVQGSNPGFIGLDH-MRGSHIGADGERANTLAPNEFVTSVTEL---HSVAL----SAREASPDQILLGSPSRSVNDDXXXXXDSEASEGFVL--DVEPDEALDES-------------LGHVQRS------RVPMRAKFCRNSQRYVATYDHYCGVLGTCIGEKNHCRFWWFLLTHTLGLAYMTRVVQSGFQDT-----KAEV---GTWLDHNTHALLVFLVVVILLCAVGSLLLFHTFLACAAMTSYEFLR-----ADKISYLE 339
BLAST of mRNA_S-firma_M_contig9362.20331.1 vs. uniprot
Match: A0A6T7JK16_9STRA (Palmitoyltransferase n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A6T7JK16_9STRA) HSP 1 Score: 98.2 bits (243), Expect = 6.420e-19 Identity = 102/340 (30.00%), Postives = 142/340 (41.76%), Query Frame = 3
Query: 6 RLGYVAVNASAVLVVGNVPGTFLW--DPEAGETADGEAFAIFLAAVAISVFAFLMIQGSNPGYLSTDRNMGGFGDLAEGEDAELLVPEAVAVTGTESQRRHRAD-------AEDPGAARQQXXXXXXXXXXXXRYPAPTEETRRTERPKGGGVGGSINSSGSVDSSDRCVSGGGGGLPRRGDFVR-------------CARCDGLQVPLRSHHCRQCGRCVATFDXXXXXXXXXXGERNHCRFWWFLLAQTVSLVEAVRIT-ASGFSETDGSPDRGETSIPGRWASRNASALVASLCLWPCLVLAVVLLGTHTWMATSSLTSYECLKGGGRGSDSLSYLE 956
RL Y+ + AV + N PGT LW + E+ + D E + + L++QGS+PGYL+ D L + + LL GT S D E R +P+ R G + G++ D LP C RC PLRSHHC+ C CVAT XXXXXXXXXXGERNHCRFWWFL Q + +E RI +S + E+++P W N + L L+P ++ ++L HT+ AT+++T++EC GR S + YLE
Sbjct: 59 RLIYLGTSLLAVTLSYNAPGTKLWVQNGESLSSVDRETLVELVVVFVLVWVTLLLVQGSDPGYLTADI----VSQLCKEDGISLL-----GYDGTPSMETEEGDQLSLTPIVEMTTRRRSNHVRTDKAEHSTNLVASPSSPGLNESRDGNGLENWGTSQEGTLSPLDI--------LPXXXXXXXXXXXXXXXRRRKVCQRCQ-FAPPLRSHHCKICDTCVATXXXXXXXXXXXXGERNHCRFWWFLSMQMLGFLECCRIVHSSSYGSFHLFHVSKESNVP--WM-HNLIVIAGKLYLYPLTLITIMLWIAHTFFATANMTTFEC----GRSSKHVDYLE 373
BLAST of mRNA_S-firma_M_contig9362.20331.1 vs. uniprot
Match: A0A024TQD3_9STRA (Palmitoyltransferase n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TQD3_9STRA) HSP 1 Score: 93.6 bits (231), Expect = 2.380e-18 Identity = 64/141 (45.39%), Postives = 83/141 (58.87%), Query Frame = 3
Query: 534 CARCDGLQVPLRSHHCRQCGRCVATFDXXXXXXXXXXGERNHCRFWWFLLAQTVSLVEAVRITASGFSETDGSPDRGETSIPGRWASRNASALVASLCLWPCLVLAVVLLGTHTWMATSSLTSYECLKGGGRGSDSLSYLE 956
C C LQ PLR++HC C RCVATFDXXXXXXXXXX E+NHCRFWWFLL ++ + + + SGF TS+ G W N+ ALVA L + A L G HT++ ++ T+ E G+G D+L+YL
Sbjct: 57 CTVCQ-LQPPLRAYHCAFCNRCVATFDXXXXXXXXXXXEKNHCRFWWFLLLTSLEVYSCLGVVHSGFHSA--------TSLQG-WLQLNSIALVAVLFFYTFAATAYSLCGFHTFLMLTNSTTREL----GKGPDNLAYLR 183
BLAST of mRNA_S-firma_M_contig9362.20331.1 vs. uniprot
Match: A0A5A8D737_CAFRO (Palmitoyltransferase n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8D737_CAFRO) HSP 1 Score: 95.1 bits (235), Expect = 7.830e-18 Identity = 101/351 (28.77%), Postives = 139/351 (39.60%), Query Frame = 3
Query: 6 RLGYVAVNASAVLVVGNVPGTFLWDPEAGETADGEAFAIFLAAVAISVFAFLMIQGSNPGYLSTDRNMGGFGD---LAEGEDAEL-LVPEAVAVTGTES---------QRRHRAD---------------------AEDPGAARQQXXXXXXXXXXXXRYP-------APTEETRRTERPKGGGVGGSINSSGSVDS--SDRCVSGGGGGLPRRGDFVRCARCDGLQVPLRSHHCRQCGRCVATFDXXXXXXXXXXGERNHCRFWWFLLAQTVSLVEAVRITASGFSETDGSPDRGETSIPGRWASRNASALVASLCLWPCLVLAVVLLGTHTWMATSSLTSYECLKGGGR 929
RL Y A + +V ++P + LW E ADG F+ +A S +L +QGSNPGY+ + D L +GED+ L + E + + E+ RR R A+ PGA Q+ P A E TE V + + DS +D + G P R +GL P+R+H C+ R V FD GERNHCRFWWFLLAQ+ ++ A+ IT S F + + G W S N +L LW L A +L H+W+A + TSYE KG R
Sbjct: 52 RLCYFATCSVFAYLVWSMPHSTLWTEEGN--ADGGVTFAFVFWLAASAATYLAVQGSNPGYIEDEAMSAAEADARGLLKGEDSRLGMAAEMIGDSDEEALTSAPRTARSRRQRPGYSPRGASAGAASXXXXEAVPAAQQPGATLQRGGRAAPPRRDAFGAPLGARPRAAELAELGLTEEEIEAEVDAEVKRRLASDSWLNDEQLEAAGPAPPPR---------EGL--PVRAHFCKVSQRYVHGFDHYCGVLATPVGERNHCRFWWFLLAQSATIGAALGITHSAFQF--------QPTYTGWW-SANGGVFALALTLWILLAFAGGMLLLHSWLAITGSTSYELFKGPRR 380
BLAST of mRNA_S-firma_M_contig9362.20331.1 vs. uniprot
Match: A0A6G0W546_9STRA (Palmitoyltransferase n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0W546_9STRA) HSP 1 Score: 93.2 bits (230), Expect = 1.410e-17 Identity = 50/141 (35.46%), Postives = 70/141 (49.65%), Query Frame = 3
Query: 534 CARCDGLQVPLRSHHCRQCGRCVATFDXXXXXXXXXXGERNHCRFWWFLLAQTVSLVEAVRITASGFSETDGSPDRGETSIPGRWASRNASALVASLCLWPCLVLAVVLLGTHTWMATSSLTSYECLKGGGRGSDSLSYLE 956
C C L+ PLR++HC C RCVATFD GE+NHCRFWWFL ++ + + I SG+ W + N+ ALVA+L W A L G HT++ ++ T+ E G+G + L+YL
Sbjct: 156 CTTCI-LEPPLRAYHCGYCNRCVATFDHHCFCIGTCIGEKNHCRFWWFLFLTSIEVYTCIGIVHSGYQSAP---------TLSAWLNANSLALVATLFFWCFAFTAYSLFGFHTFLMLTNSTTREL----GKGPEKLAYLR 282
BLAST of mRNA_S-firma_M_contig9362.20331.1 vs. uniprot
Match: A0A7S1UKH9_9STRA (Palmitoyltransferase n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UKH9_9STRA) HSP 1 Score: 88.2 bits (217), Expect = 1.760e-16 Identity = 56/144 (38.89%), Postives = 69/144 (47.92%), Query Frame = 3
Query: 534 CARCDGLQVPLRSHHCRQCGRCVATFDXXXXXXXXXXGERNHCRFWWFLLAQTVSLVEAVRITASGFSETDGSPDRGETSIPGRWASRNASALVASLCLWPCLVLAVVLLGT---HTWMATSSLTSYECLKGGGRGSDSLSYLE 956
C C G PLR+HHCR C RCVATFD XX GERN CRFWW+L Q +L AV I A G G WA NA L+ S + ++ + + G TW+A ++ T YE RG + L YL
Sbjct: 19 CGAC-GFAPPLRAHHCRTCDRCVATFDHXXNCIGTCVGERNACRFWWWLFFQCAALWCAVGIAAEAVVNV------GRVKSWGAWADTNAGPLILSFLVG---LIGLYVFGVFCFQTWLAATTSTGYEVY----RGPEGLKYLR 148
BLAST of mRNA_S-firma_M_contig9362.20331.1 vs. uniprot
Match: T0RRY6_SAPDV (UDENN domain-containing protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0RRY6_SAPDV) HSP 1 Score: 91.7 bits (226), Expect = 2.350e-16 Identity = 62/140 (44.29%), Postives = 80/140 (57.14%), Query Frame = 3
Query: 534 CARCDGLQVPLRSHHCRQCGRCVATFDXXXXXXXXXXGERNHCRFWWFLLAQTVSLVEAVRITASGFSETDGSPDRGETSIPGRWASRNASALVASLCLWPCLVLAVVLLGTHTWMATSSLTSYECLKGGGRGSDSLSYL 953
CA C L+ PLRS+HC C RCVATFD XXXXXXXXXGERNHCRFWWF+L + + + I S F E ++ W N AL A++ W +L LLG HT++ ++ T+ E G+G + L YL
Sbjct: 149 CAACS-LEPPLRSYHCPFCNRCVATFDHXXXXXXXXXGERNHCRFWWFILLSCMEVSTCLGIIHSSFHT--------EATLQ-LWLRANGMALTAAMFFWFFALLTYSLLGFHTFLMLTNSTTREL----GKGPEKLKYL 274 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig9362.20331.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_M_contig9362.20331.1 >prot_S-firma_M_contig9362.20331.1 ID=prot_S-firma_M_contig9362.20331.1|Name=mRNA_S-firma_M_contig9362.20331.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=268bp MIQGSNPGYLSTDRNMGGFGDLAEGEDAELLVPEAVAVTGTESQRRHRADback to top mRNA from alignment at S-firma_M_contig9362:487..3802+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_M_contig9362.20331.1 ID=mRNA_S-firma_M_contig9362.20331.1|Name=mRNA_S-firma_M_contig9362.20331.1|organism=Sphaerotrichia firma Sfir_13m male|type=mRNA|length=3316bp|location=Sequence derived from alignment at S-firma_M_contig9362:487..3802+ (Sphaerotrichia firma Sfir_13m male)back to top Coding sequence (CDS) from alignment at S-firma_M_contig9362:487..3802+ >mRNA_S-firma_M_contig9362.20331.1 ID=mRNA_S-firma_M_contig9362.20331.1|Name=mRNA_S-firma_M_contig9362.20331.1|organism=Sphaerotrichia firma Sfir_13m male|type=CDS|length=1608bp|location=Sequence derived from alignment at S-firma_M_contig9362:487..3802+ (Sphaerotrichia firma Sfir_13m male)back to top |