mRNA_S-firma_M_contig9357.20324.1 (mRNA) Sphaerotrichia firma Sfir_13m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-firma_M_contig9357.20324.1
Unique NamemRNA_S-firma_M_contig9357.20324.1
TypemRNA
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Homology
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BLAST of mRNA_S-firma_M_contig9357.20324.1 vs. uniprot
Match: D8LHV0_ECTSI (Diacylglycerol kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHV0_ECTSI)

HSP 1 Score: 168 bits (425), Expect = 5.730e-47
Identity = 82/93 (88.17%), Postives = 89/93 (95.70%), Query Frame = 1 
Query:    4 SVTYSRKTRSVTLTICGENIPEDSCPLVVFVNSKSGGKQGGVLLSRFRALLNPLQVSDLSQEDPLEVLHRFRNVHNLRLLACGGDGTVAWLLQ 282
            +V+Y+RKTRSVTL+IC ENIP+DSCPL+VFVNSKSGGKQGGVL+SRFRALLNPLQV DLSQEDPLEVL RFRNV NLRLLACGGDGTVAWLLQ
Sbjct:  124 TVSYTRKTRSVTLSICEENIPDDSCPLLVFVNSKSGGKQGGVLISRFRALLNPLQVIDLSQEDPLEVLQRFRNVANLRLLACGGDGTVAWLLQ 216
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BLAST of mRNA_S-firma_M_contig9357.20324.1 vs. uniprot
Match: A0A6H5LB27_9PHAE (Diacylglycerol kinase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LB27_9PHAE)

HSP 1 Score: 168 bits (425), Expect = 2.150e-46
Identity = 82/93 (88.17%), Postives = 89/93 (95.70%), Query Frame = 1 
Query:    4 SVTYSRKTRSVTLTICGENIPEDSCPLVVFVNSKSGGKQGGVLLSRFRALLNPLQVSDLSQEDPLEVLHRFRNVHNLRLLACGGDGTVAWLLQ 282
            +V+Y+RKTRSVTL+IC ENIP+DSCPL+VFVNSKSGGKQGGVL+SRFRALLNPLQV DLSQEDPLEVL RFRNV NLRLLACGGDGTVAWLLQ
Sbjct:  862 TVSYTRKTRSVTLSICEENIPDDSCPLLVFVNSKSGGKQGGVLISRFRALLNPLQVIDLSQEDPLEVLQRFRNVANLRLLACGGDGTVAWLLQ 954
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BLAST of mRNA_S-firma_M_contig9357.20324.1 vs. uniprot
Match: A0A7R9Y0K7_MICPS (Hypothetical protein (Fragment) n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7R9Y0K7_MICPS)

HSP 1 Score: 92.0 bits (227), Expect = 3.330e-21
Identity = 42/74 (56.76%), Postives = 55/74 (74.32%), Query Frame = 1 
Query:   61 IPEDSCPLVVFVNSKSGGKQGGVLLSRFRALLNPLQVSDLSQEDPLEVLHRFRNVHNLRLLACGGDGTVAWLLQ 282
            +P+D+ PL+VFVNS+SGG+ GG L S+ +  LNPLQV DL + DP   L  F N+  LR++ CGGDGTVAW+LQ
Sbjct:   94 LPDDASPLLVFVNSRSGGQLGGYLTSQLKQNLNPLQVVDLHKTDPKFALRLFSNLPKLRIMVCGGDGTVAWILQ 167
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BLAST of mRNA_S-firma_M_contig9357.20324.1 vs. uniprot
Match: A0A822FS20_9BILA (Hypothetical protein (Fragment) n=1 Tax=Rotaria sp. Silwood1 TaxID=2762511 RepID=A0A822FS20_9BILA)

HSP 1 Score: 95.1 bits (235), Expect = 5.760e-21
Identity = 45/79 (56.96%), Postives = 56/79 (70.89%), Query Frame = 1 
Query:   46 ICGENIPEDSCPLVVFVNSKSGGKQGGVLLSRFRALLNPLQVSDLSQEDPLEVLHRFRNVHNLRLLACGGDGTVAWLLQ 282
            I  + IP + CPL+VFVN KSGG+QG  L++ FR LLNP QV DL    PL  L+ FRN+ + R+LACGGDGTV W+L 
Sbjct:  224 IQSQTIPSNICPLLVFVNVKSGGQQGAELITNFRHLLNPHQVFDLQNGGPLPGLYVFRNIKHYRILACGGDGTVGWVLS 302
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BLAST of mRNA_S-firma_M_contig9357.20324.1 vs. uniprot
Match: A0A818MNY3_9BILA (Diacylglycerol kinase n=2 Tax=Rotaria sp. Silwood1 TaxID=2762511 RepID=A0A818MNY3_9BILA)

HSP 1 Score: 95.1 bits (235), Expect = 9.100e-21
Identity = 45/79 (56.96%), Postives = 56/79 (70.89%), Query Frame = 1 
Query:   46 ICGENIPEDSCPLVVFVNSKSGGKQGGVLLSRFRALLNPLQVSDLSQEDPLEVLHRFRNVHNLRLLACGGDGTVAWLLQ 282
            I  + IP + CPL+VFVN KSGG+QG  L++ FR LLNP QV DL    PL  L+ FRN+ + R+LACGGDGTV W+L 
Sbjct:  313 IQSQTIPSNICPLLVFVNVKSGGQQGAELITNFRHLLNPHQVFDLQNGGPLPGLYVFRNIKHYRILACGGDGTVGWVLS 391
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BLAST of mRNA_S-firma_M_contig9357.20324.1 vs. uniprot
Match: A0A814L410_9BILA (Diacylglycerol kinase n=12 Tax=Rotaria sp. Silwood1 TaxID=2762511 RepID=A0A814L410_9BILA)

HSP 1 Score: 95.1 bits (235), Expect = 9.300e-21
Identity = 45/79 (56.96%), Postives = 56/79 (70.89%), Query Frame = 1 
Query:   46 ICGENIPEDSCPLVVFVNSKSGGKQGGVLLSRFRALLNPLQVSDLSQEDPLEVLHRFRNVHNLRLLACGGDGTVAWLLQ 282
            I  + IP + CPL+VFVN KSGG+QG  L++ FR LLNP QV DL    PL  L+ FRN+ + R+LACGGDGTV W+L 
Sbjct:  749 IQSQTIPSNICPLLVFVNVKSGGQQGAELITNFRHLLNPHQVFDLQNGGPLPGLYVFRNIKHYRILACGGDGTVGWVLS 827
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BLAST of mRNA_S-firma_M_contig9357.20324.1 vs. uniprot
Match: UPI001C4DC21B (diacylglycerol kinase theta-like n=1 Tax=Plectropomus leopardus TaxID=160734 RepID=UPI001C4DC21B)

HSP 1 Score: 90.9 bits (224), Expect = 1.400e-20
Identity = 51/97 (52.58%), Postives = 59/97 (60.82%), Query Frame = 1 
Query:    1 KSVTYSRKTRS--VTLTICGENIPEDSCPLVVFVNSKSGGKQGGVLLSRFRALLNPLQVSDLSQEDPLEVLHRFRNVHNLRLLACGGDGTVAWLLQV 285
            K  T + KT +  V   I    + ED CPL+VFVN KSGG +G  LL  FR LLNP QV D+S   PL  LH FR V   R+L CGGDGTV W+L V
Sbjct:   20 KDTTVNNKTLTSLVIPEIVHNQLGEDVCPLLVFVNPKSGGLKGRELLYSFRKLLNPHQVFDISNGGPLAGLHTFRAVPRFRVLVCGGDGTVGWVLGV 116
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BLAST of mRNA_S-firma_M_contig9357.20324.1 vs. uniprot
Match: A0A818B246_9BILA (Diacylglycerol kinase n=2 Tax=Rotaria sp. Silwood1 TaxID=2762511 RepID=A0A818B246_9BILA)

HSP 1 Score: 93.6 bits (231), Expect = 2.340e-20
Identity = 44/74 (59.46%), Postives = 54/74 (72.97%), Query Frame = 1 
Query:   61 IPEDSCPLVVFVNSKSGGKQGGVLLSRFRALLNPLQVSDLSQEDPLEVLHRFRNVHNLRLLACGGDGTVAWLLQ 282
            IP + CPL+VFVN KSGG+QG  L++ FR LLNP QV DL    PL  L+ FRN+ + R+LACGGDGTV W+L 
Sbjct:   53 IPSNICPLLVFVNVKSGGQQGAELITNFRHLLNPHQVFDLQNGGPLPGLYVFRNIPHYRILACGGDGTVGWVLS 126
[Close]
BLAST of mRNA_S-firma_M_contig9357.20324.1 vs. uniprot
Match: A0A817Q5L7_9BILA (Hypothetical protein n=1 Tax=Rotaria sp. Silwood2 TaxID=2762512 RepID=A0A817Q5L7_9BILA)

HSP 1 Score: 94.0 bits (232), Expect = 2.340e-20
Identity = 44/76 (57.89%), Postives = 55/76 (72.37%), Query Frame = 1 
Query:   55 ENIPEDSCPLVVFVNSKSGGKQGGVLLSRFRALLNPLQVSDLSQEDPLEVLHRFRNVHNLRLLACGGDGTVAWLLQ 282
            + IP + CPL+VFVN KSGG+QG  L++ FR LLNP QV DL    PL  L+ FRN+ + R+LACGGDGTV W+L 
Sbjct:  717 QTIPPNICPLLVFVNVKSGGQQGAELITNFRHLLNPHQVFDLQNGGPLPGLYVFRNIPHYRILACGGDGTVGWVLS 792
[Close]
BLAST of mRNA_S-firma_M_contig9357.20324.1 vs. uniprot
Match: H3A3N1_LATCH (Diacylglycerol kinase n=2 Tax=Latimeria chalumnae TaxID=7897 RepID=H3A3N1_LATCH)

HSP 1 Score: 94.0 bits (232), Expect = 2.350e-20
Identity = 45/77 (58.44%), Postives = 52/77 (67.53%), Query Frame = 1 
Query:   55 ENIPEDSCPLVVFVNSKSGGKQGGVLLSRFRALLNPLQVSDLSQEDPLEVLHRFRNVHNLRLLACGGDGTVAWLLQV 285
            E IP+ SCPL+VFVN KSGG +G  LL  FR LLNP QV DL+   PL   H F  + N R+L CGGDGTV W+L V
Sbjct:  574 EKIPQKSCPLLVFVNPKSGGLKGRELLHSFRKLLNPHQVFDLANGGPLPGFHTFHQIPNFRILVCGGDGTVGWVLGV 650
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig9357.20324.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LHV0_ECTSI5.730e-4788.17Diacylglycerol kinase n=1 Tax=Ectocarpus siliculos... [more]
A0A6H5LB27_9PHAE2.150e-4688.17Diacylglycerol kinase n=1 Tax=Ectocarpus sp. CCAP ... [more]
A0A7R9Y0K7_MICPS3.330e-2156.76Hypothetical protein (Fragment) n=1 Tax=Micromonas... [more]
A0A822FS20_9BILA5.760e-2156.96Hypothetical protein (Fragment) n=1 Tax=Rotaria sp... [more]
A0A818MNY3_9BILA9.100e-2156.96Diacylglycerol kinase n=2 Tax=Rotaria sp. Silwood1... [more]
A0A814L410_9BILA9.300e-2156.96Diacylglycerol kinase n=12 Tax=Rotaria sp. Silwood... [more]
UPI001C4DC21B1.400e-2052.58diacylglycerol kinase theta-like n=1 Tax=Plectropo... [more]
A0A818B246_9BILA2.340e-2059.46Diacylglycerol kinase n=2 Tax=Rotaria sp. Silwood1... [more]
A0A817Q5L7_9BILA2.340e-2057.89Hypothetical protein n=1 Tax=Rotaria sp. Silwood2 ... [more]
H3A3N1_LATCH2.350e-2058.44Diacylglycerol kinase n=2 Tax=Latimeria chalumnae ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig9357contigS-firma_M_contig9357:3162..4064 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-19
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score169.9
Seed ortholog evalue5.9e-40
Seed eggNOG ortholog2880.D8LHV0
KEGG rclassRC00002,RC00017
KEGG koko:K00901
KEGG ReactionR02240
KEGG Pathwayko00561,ko00564,ko01100,ko01110,ko04070,ko04072,ko05231,map00561,map00564,map01100,map01110,map04070,map04072,map05231
GOsGO:0003674,GO:0003824,GO:0004143,GO:0005488,GO:0005509,GO:0006793,GO:0006796,GO:0006950,GO:0007275,GO:0008150,GO:0008152,GO:0009266,GO:0009409,GO:0009611,GO:0009628,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0022622,GO:0032501,GO:0032502,GO:0043167,GO:0043169,GO:0044237,GO:0046872,GO:0048364,GO:0048366,GO:0048367,GO:0048731,GO:0048827,GO:0048856,GO:0050896,GO:0099402
EggNOG free text desc.protein kinase C-activating G-protein coupled receptor signaling pathway
EggNOG OGsKOG1169@1,KOG1169@2759
EC2.7.1.107
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Hectar predicted targeting categoryother localisation
Exons2
Model size285
Cds size285
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622828766.0086534-CDS-S-firma_M_contig9357:3161..33291622828766.0086534-CDS-S-firma_M_contig9357:3161..3329Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig9357 3162..3329 +
1697105149.4998999-CDS-S-firma_M_contig9357:3161..33291697105149.4998999-CDS-S-firma_M_contig9357:3161..3329Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig9357 3162..3329 +
1622828766.021616-CDS-S-firma_M_contig9357:3947..40641622828766.021616-CDS-S-firma_M_contig9357:3947..4064Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig9357 3948..4064 +
1697105149.511727-CDS-S-firma_M_contig9357:3947..40641697105149.511727-CDS-S-firma_M_contig9357:3947..4064Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig9357 3948..4064 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig9357.20324.1prot_S-firma_M_contig9357.20324.1Sphaerotrichia firma Sfir_13m malepolypeptideS-firma_M_contig9357 3162..4064 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-firma_M_contig9357.20324.1

>prot_S-firma_M_contig9357.20324.1 ID=prot_S-firma_M_contig9357.20324.1|Name=mRNA_S-firma_M_contig9357.20324.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=95bp
KSVTYSRKTRSVTLTICGENIPEDSCPLVVFVNSKSGGKQGGVLLSRFRA
LLNPLQVSDLSQEDPLEVLHRFRNVHNLRLLACGGDGTVAWLLQV
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mRNA from alignment at S-firma_M_contig9357:3162..4064+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-firma_M_contig9357.20324.1 ID=mRNA_S-firma_M_contig9357.20324.1|Name=mRNA_S-firma_M_contig9357.20324.1|organism=Sphaerotrichia firma Sfir_13m male|type=mRNA|length=903bp|location=Sequence derived from alignment at S-firma_M_contig9357:3162..4064+ (Sphaerotrichia firma Sfir_13m male)
AAGTCGGTGACCTACTCCCGCAAGACGCGGTCGGTGACGCTCACCATCTG
CGGGGAGAACATCCCCGAGGACAGCTGCCCTCTCGTCGTCTTCGTCAACT
CCAAGTCCGGCGGAAAGCAGGGCGGGGTGCTTCTCAGCCGATTCCGGGCC
CTGCTGAACCCCCTGCAGGTGTGATACATACAAAGTAGTGCGATGTTGTG
GTGGGGTTGGTGTTATTATAGTGGCTGCTGAACCTCCTGCAGGTGTGATA
CGTACAAAGTAGTGCGATGTTGTGGTGGGGTTGGTGGATTCAACCGGCTC
TATGTAGGTATTCCTGACTACGGTGGTGTTTTTTTCGCTTGCTGTTTTGC
GCCTTTTGGGAGTGGGGGTGTGCTGTTTTGTATCATGTTCTTTTCGGAGG
GGCACGCCAGCTGGGATAGGCGAAAACGCCTGGCATGCCGGCGTGAGGAC
GACGCTTGCTGCTCTCGTTTTTTCGGCGGCCGAACCCTCCTGCGTTCCTG
GTGGGCTGACGAACAGCACCCGTACGGCAGAACCGGTTGTCTGCACCCGG
CATCGCCAAGAAATTAGCTAACGCTCTTGCAGCCAATGACCCCTGAGCTC
GATTTTGTCATCCCGTCGAGCACGAGCACCAACATGGCGTACGTACGTGG
GCCGTGTGGGGTACAAGAGGTAGTTCAAACCTAACCCTTGTCGTAAAACC
CTGACCTTGTCCCTCCCCTTGCGCTGTTTCTCCGTTGCACCTGTACTGTC
CGCAACCGTACTGGCCGACACTGCTTGCTGTGGCAGGTGTCCGACCTCAG
CCAGGAGGACCCCCTGGAGGTGCTTCACCGCTTCCGGAACGTCCACAACT
TGCGGCTGCTCGCCTGTGGTGGCGATGGGACTGTGGCGTGGCTGCTGCAG
GTA
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Coding sequence (CDS) from alignment at S-firma_M_contig9357:3162..4064+

>mRNA_S-firma_M_contig9357.20324.1 ID=mRNA_S-firma_M_contig9357.20324.1|Name=mRNA_S-firma_M_contig9357.20324.1|organism=Sphaerotrichia firma Sfir_13m male|type=CDS|length=570bp|location=Sequence derived from alignment at S-firma_M_contig9357:3162..4064+ (Sphaerotrichia firma Sfir_13m male)
AAGTCGGTGACCTACTCCCGCAAGACGCGGTCGGTGACGCTCACCATCTG
CGGGGAGAACATCCCCGAGGACAGCTGCCCTCTCGTCGTCTTCGTCAACT
CCAAGTCCGGCGGAAAGCAGGGCGGGGTGCTTCTCAGCCGATTCCGGGCC
CTGCTGAACCCCCTGCAGAAGTCGGTGACCTACTCCCGCAAGACGCGGTC
GGTGACGCTCACCATCTGCGGGGAGAACATCCCCGAGGACAGCTGCCCTC
TCGTCGTCTTCGTCAACTCCAAGTCCGGCGGAAAGCAGGGCGGGGTGCTT
CTCAGCCGATTCCGGGCCCTGCTGAACCCCCTGCAGGTGTCCGACCTCAG
CCAGGAGGACCCCCTGGAGGTGCTTCACCGCTTCCGGAACGTCCACAACT
TGCGGCTGCTCGCCTGTGGTGGCGATGGGACTGTGGCGTGGCTGCTGCAG
GTAGTGTCCGACCTCAGCCAGGAGGACCCCCTGGAGGTGCTTCACCGCTT
CCGGAACGTCCACAACTTGCGGCTGCTCGCCTGTGGTGGCGATGGGACTG
TGGCGTGGCTGCTGCAGGTA
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