mRNA_S-firma_M_contig9346.20313.1 (mRNA) Sphaerotrichia firma Sfir_13m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-firma_M_contig9346.20313.1
Unique NamemRNA_S-firma_M_contig9346.20313.1
TypemRNA
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Homology
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BLAST of mRNA_S-firma_M_contig9346.20313.1 vs. uniprot
Match: A0A6H5L2A7_9PHAE (Pyruvate carboxylase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2A7_9PHAE)

HSP 1 Score: 483 bits (1243), Expect = 1.850e-162
Identity = 241/267 (90.26%), Postives = 253/267 (94.76%), Query Frame = 1 
Query:    4 QPFLLNVLKHPEFVDGTVNTSFIGENPLLLAPMRVSNRGQKMLKYIADVIVNGPDPSLGAVGGEPAILDPTVPSLDPAVDLPAKTEPSLRDIYLE----NGPAAFAKAVRDNKGTLITDTTWRDAHQSLLATRVRTADLLNVAPATSVALRKAYSLECWGGATFDVSMRFLKECPWDRLAKMREAVPDIPFQMLLRGANAVGYTSYPDNVVFKFCEEAQKAGMDVFRVFDSLNYLENMRLGIDAVGAAGGIVEAAVCYTGDITDTSS 792
            +PFLLNVLKHP+FVDGTVNTSFIGENP LL+PMRVSNRGQKMLKYIADVIVNGPDPSLGAVGGEPAI+DPTVP+LDP  D+P KTEPSLRDIY++    +GP AFAKAVR N+G LITDTTWRDAHQSLLATRVRT DLLNVAPATSVALRKAYSLECWGGATFDVSMRFLKECPWDRLAK+REAVPDIPFQMLLRGANAVGYTSYPDNVVF+FCEEAQKAGMDVFRVFDSLNYLENMRLGIDAVGAAGGIVEAAVCYTGDI D SS
Sbjct:  198 KPFLLNVLKHPDFVDGTVNTSFIGENPHLLSPMRVSNRGQKMLKYIADVIVNGPDPSLGAVGGEPAIVDPTVPALDPMTDMPKKTEPSLRDIYVKACQRDGPEAFAKAVRSNEGLLITDTTWRDAHQSLLATRVRTIDLLNVAPATSVALRKAYSLECWGGATFDVSMRFLKECPWDRLAKIREAVPDIPFQMLLRGANAVGYTSYPDNVVFRFCEEAQKAGMDVFRVFDSLNYLENMRLGIDAVGAAGGIVEAAVCYTGDILDPSS 464
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BLAST of mRNA_S-firma_M_contig9346.20313.1 vs. uniprot
Match: D8LCR8_ECTSI (Pyruvate carboxylase n=2 Tax=Phaeophyceae TaxID=2870 RepID=D8LCR8_ECTSI)

HSP 1 Score: 478 bits (1231), Expect = 2.730e-158
Identity = 239/265 (90.19%), Postives = 251/265 (94.72%), Query Frame = 1 
Query:    4 QPFLLNVLKHPEFVDGTVNTSFIGENPLLLAPMRVSNR--GQKMLKYIADVIVNGPDPSLGAVGGEPAILDPTVPSLDPAVDLPAKTEPSLRDIYLENGPAAFAKAVRDNKGTLITDTTWRDAHQSLLATRVRTADLLNVAPATSVALRKAYSLECWGGATFDVSMRFLKECPWDRLAKMREAVPDIPFQMLLRGANAVGYTSYPDNVVFKFCEEAQKAGMDVFRVFDSLNYLENMRLGIDAVGAAGGIVEAAVCYTGDITDTSS 792
            +PFLLNVLKHP+FVDGTVNTSFIGENP LLAPMRVSNR    KMLKYIADVIVNGPDPSLGAVGGEPAI+DPTVP+LDP  D+P KTEPSLRDIY+++GP AFAKAVR N+G LITDTTWRDAHQSLLATRVRT DLLNVAPATSVALRKAYSLECWGGATFDVSMRFLKECPWDRLAK+REAVPDIPFQMLLRGANAVGYTSYPDNVVF+FCEEAQKAGMDVFRVFDSLNYLENMRLGIDAVGAAGGIVEAAVCYTGDI D +S
Sbjct:  480 KPFLLNVLKHPDFVDGTVNTSFIGENPHLLAPMRVSNRFPWPKMLKYIADVIVNGPDPSLGAVGGEPAIVDPTVPALDPMTDMPKKTEPSLRDIYVKDGPEAFAKAVRSNEGLLITDTTWRDAHQSLLATRVRTIDLLNVAPATSVALRKAYSLECWGGATFDVSMRFLKECPWDRLAKIREAVPDIPFQMLLRGANAVGYTSYPDNVVFRFCEEAQKAGMDVFRVFDSLNYLENMRLGIDAVGAAGGIVEAAVCYTGDILDPTS 744
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BLAST of mRNA_S-firma_M_contig9346.20313.1 vs. uniprot
Match: A0A835YR17_9STRA (Pyruvate carboxylase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YR17_9STRA)

HSP 1 Score: 404 bits (1038), Expect = 1.590e-129
Identity = 200/261 (76.63%), Postives = 227/261 (86.97%), Query Frame = 1 
Query:    4 QPFLLNVLKHPEFVDGTVNTSFIGENPLLLAPMRVSNRGQKMLKYIADVIVNGPDPSLGAVGGEPAILDPTVPSLDPAVDLPAKTE-PSLRDIYLENGPAAFAKAVRDNKGTLITDTTWRDAHQSLLATRVRTADLLNVAPATSVALRKAYSLECWGGATFDVSMRFLKECPWDRLAKMREAVPDIPFQMLLRGANAVGYTSYPDNVVFKFCEEAQKAGMDVFRVFDSLNYLENMRLGIDAVGAAGGIVEAAVCYTGDITD 783
            +PFLL VL HP+FVDGTV+TSFI ENP LL PM V+NRG K+L YI++VIVNGP  +LGAVG  P+ +DP +P+L PA   PAK + PSLR+ Y+  GPAAFAKAVRDNKG LITDTTWRDAHQSLLATR+RT D+LN+APAT+ AL  AYSLECWGGATFDVSMRFL ECPWDRLA++REAVPDIPFQMLLRGANAVGYTSYPDNVV+KFCE AQ+ GMDVFRVFDSLNYL NM+LG+DAVG AGGIVEA VCYTGD++D
Sbjct:  459 KPFLLGVLDHPDFVDGTVDTSFIAENPQLLEPMHVANRGSKLLTYISNVIVNGPPKALGAVGAPPSPVDPQIPTL-PA---PAKKQGPSLRETYVNKGPAAFAKAVRDNKGLLITDTTWRDAHQSLLATRMRTVDMLNIAPATATALANAYSLECWGGATFDVSMRFLNECPWDRLAQLREAVPDIPFQMLLRGANAVGYTSYPDNVVYKFCELAQQTGMDVFRVFDSLNYLPNMQLGVDAVGTAGGIVEAVVCYTGDVSD 715
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BLAST of mRNA_S-firma_M_contig9346.20313.1 vs. uniprot
Match: A0A7S2U4M9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2U4M9_9STRA)

HSP 1 Score: 384 bits (985), Expect = 1.560e-127
Identity = 187/258 (72.48%), Postives = 221/258 (85.66%), Query Frame = 1 
Query:   10 FLLNVLKHPEFVDGTVNTSFIGENPLLLAPMRVSNRGQKMLKYIADVIVNGPDPSLGAVGGEPAILDPTVPSLDPAVDLPAKTEPSLRDIYLENGPAAFAKAVRDNKGTLITDTTWRDAHQSLLATRVRTADLLNVAPATSVALRKAYSLECWGGATFDVSMRFLKECPWDRLAKMREAVPDIPFQMLLRGANAVGYTSYPDNVVFKFCEEAQKAGMDVFRVFDSLNYLENMRLGIDAVGAAGGIVEAAVCYTGDITD 783
            FLLNVL++ +F++GTV+TSFI  NP LL P++  +R QK+L YI DVIVNGP  SLGAVG  P+ +DP +P+++P      KT+PSL++I+  NGP AFAKAVR N+G LITDTTWRDAHQSLLATR+RT D+LN+APATSVALR AYS+E WGGATFDV MRFLKECPWDRLA MREAVPDIPFQMLLRGANAVGYTSYPDNVV++FC+ A+  GMDVFRVFDS+NY+ENM+LGIDAVG AGGIVEAA CYTGD++D
Sbjct:   35 FLLNVLENDQFMNGTVDTSFIAANPYLLEPLKEKDRAQKLLHYIGDVIVNGPPKSLGAVGTPPSPIDPIIPTIEPK----PKTKPSLKEIFDTNGPEAFAKAVRQNEGLLITDTTWRDAHQSLLATRLRTIDILNIAPATSVALRNAYSIENWGGATFDVCMRFLKECPWDRLAAMREAVPDIPFQMLLRGANAVGYTSYPDNVVYEFCQVAKDTGMDVFRVFDSVNYIENMKLGIDAVGQAGGIVEAACCYTGDVSD 288
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BLAST of mRNA_S-firma_M_contig9346.20313.1 vs. uniprot
Match: A0A5D6XYJ8_9STRA (Pyruvate carboxylase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XYJ8_9STRA)

HSP 1 Score: 391 bits (1004), Expect = 1.550e-124
Identity = 195/260 (75.00%), Postives = 224/260 (86.15%), Query Frame = 1 
Query:   10 FLLNVLKHPEFVDGTVNTSFIGENPLLLAPMRVSNRGQKMLKYIADVIVNGPDPSLGAVGGEPAILDPTVPSLDPAVDLPAKTEP--SLRDIYLENGPAAFAKAVRDNKGTLITDTTWRDAHQSLLATRVRTADLLNVAPATSVALRKAYSLECWGGATFDVSMRFLKECPWDRLAKMREAVPDIPFQMLLRGANAVGYTSYPDNVVFKFCEEAQKAGMDVFRVFDSLNYLENMRLGIDAVGAAGGIVEAAVCYTGDITD 783
            FL NVL HP+F+ G V+TSFI ENP LL+P   +NRGQK+LKYI + IVNGP+ +LGA G  P+ +DP VP L P    P + +P  SLR IY++NGPAAFAKAVR +KG L+TDTTWRDAHQSLLATRVRT DLL +APATSVA+R AYSLE WGGATFDV+MRFL+E PWDRLA++REAVPDIPFQMLLRGANAVGYTSYPDNVV+KFCE+AQ+ GMDVFRVFDSLNYLENMRLGIDAVGAAGGI+EAAVCYTGD++D
Sbjct:  452 FLANVLNHPDFIRGVVDTSFIAENPQLLSPSTSTNRGQKLLKYIGNTIVNGPEKALGASGPAPSKVDPIVPVLAP----PTQQQPHESLRQIYVQNGPAAFAKAVRAHKGLLLTDTTWRDAHQSLLATRVRTRDLLAIAPATSVAMRNAYSLEMWGGATFDVAMRFLREDPWDRLAELREAVPDIPFQMLLRGANAVGYTSYPDNVVYKFCEKAQQTGMDVFRVFDSLNYLENMRLGIDAVGAAGGIIEAAVCYTGDVSD 707
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BLAST of mRNA_S-firma_M_contig9346.20313.1 vs. uniprot
Match: K3X778_GLOUD (Pyruvate carboxylase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X778_GLOUD)

HSP 1 Score: 390 bits (1002), Expect = 2.980e-124
Identity = 190/258 (73.64%), Postives = 221/258 (85.66%), Query Frame = 1 
Query:   10 FLLNVLKHPEFVDGTVNTSFIGENPLLLAPMRVSNRGQKMLKYIADVIVNGPDPSLGAVGGEPAILDPTVPSLDPAVDLPAKTEPSLRDIYLENGPAAFAKAVRDNKGTLITDTTWRDAHQSLLATRVRTADLLNVAPATSVALRKAYSLECWGGATFDVSMRFLKECPWDRLAKMREAVPDIPFQMLLRGANAVGYTSYPDNVVFKFCEEAQKAGMDVFRVFDSLNYLENMRLGIDAVGAAGGIVEAAVCYTGDITD 783
            FL NVL HP+F+ G V+TSFI ENP LL+P   +NRGQK+LKYI + IVNGP+ +LGA G  P+ +DP +P L P      K E SLR IY+++GPAAFAKAVR+NKG L+TDTTWRDAHQSLLATRVRT DLL +APAT +A+R AYSLE WGGATFDV+MRFL+E PWDRLA +REAVPDIPFQMLLRGANAVGYTSYPDNVV+KFCE+AQ+ GMDVFRVFDSLNY++NMRLGIDAVGAAGGI+EAAVCYTGD++D
Sbjct:  454 FLANVLNHPDFIKGVVDTSFIAENPQLLSPSTSTNRGQKLLKYIGNTIVNGPEKALGATGPAPSKVDPLIPVLSPPSAADQKQE-SLRQIYVKHGPAAFAKAVRENKGLLLTDTTWRDAHQSLLATRVRTRDLLAIAPATQIAMRNAYSLEMWGGATFDVAMRFLREDPWDRLASLREAVPDIPFQMLLRGANAVGYTSYPDNVVYKFCEKAQQTGMDVFRVFDSLNYIDNMRLGIDAVGAAGGIIEAAVCYTGDVSD 710
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BLAST of mRNA_S-firma_M_contig9346.20313.1 vs. uniprot
Match: A0A4D9CY33_9STRA (Pyruvate carboxylase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CY33_9STRA)

HSP 1 Score: 390 bits (1001), Expect = 6.010e-124
Identity = 196/258 (75.97%), Postives = 217/258 (84.11%), Query Frame = 1 
Query:   10 FLLNVLKHPEFVDGTVNTSFIGENPLLLAPMRVSNRGQKMLKYIADVIVNGPDPSLGAVGGEPAILDPTVPSLDPAVDLPAKTEPSLRDIYLENGPAAFAKAVRDNKGTLITDTTWRDAHQSLLATRVRTADLLNVAPATSVALRKAYSLECWGGATFDVSMRFLKECPWDRLAKMREAVPDIPFQMLLRGANAVGYTSYPDNVVFKFCEEAQKAGMDVFRVFDSLNYLENMRLGIDAVGAAGGIVEAAVCYTGDITD 783
            F+LN+L HP+F+ G V+T FI  NP LL P+  SNRGQK+LK+I +VIVNGP+PSLGA G   + +DP VP+L P   LP + E SLR IYLE GP  FA+AVR +KGTLITDTTWRDAHQSLLATRVRT DLL +A AT +AL  AYSLE WGGATFDVSMRFL+E PWDRL  MREAVPDIPFQMLLRGANAVGYTSYPDNVVFKFCE AQK GMDVFR+FDSLNYLENMRLGIDAVGAAGGIVEAA+CYTGDITD
Sbjct:  487 FVLNLLSHPDFIHGQVDTGFIARNPALLQPVWSSNRGQKLLKFIGNVIVNGPEPSLGATGPPCSPIDPIVPTLSP---LPPRKEKSLRQIYLERGPKGFAQAVRKHKGTLITDTTWRDAHQSLLATRVRTRDLLRIAEATGIALAPAYSLENWGGATFDVSMRFLREDPWDRLGAMREAVPDIPFQMLLRGANAVGYTSYPDNVVFKFCELAQKHGMDVFRIFDSLNYLENMRLGIDAVGAAGGIVEAAICYTGDITD 741
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BLAST of mRNA_S-firma_M_contig9346.20313.1 vs. uniprot
Match: A0A2D4BQS3_PYTIN (Putative carboxylase n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BQS3_PYTIN)

HSP 1 Score: 380 bits (975), Expect = 2.060e-123
Identity = 185/258 (71.71%), Postives = 217/258 (84.11%), Query Frame = 1 
Query:   10 FLLNVLKHPEFVDGTVNTSFIGENPLLLAPMRVSNRGQKMLKYIADVIVNGPDPSLGAVGGEPAILDPTVPSLDPAVDLPAKTEPSLRDIYLENGPAAFAKAVRDNKGTLITDTTWRDAHQSLLATRVRTADLLNVAPATSVALRKAYSLECWGGATFDVSMRFLKECPWDRLAKMREAVPDIPFQMLLRGANAVGYTSYPDNVVFKFCEEAQKAGMDVFRVFDSLNYLENMRLGIDAVGAAGGIVEAAVCYTGDITD 783
            F+LNVL HP+F++G V+T FI  NP LL P R +NRGQK+LK I + IVNGP+  LGA G  P+ +DP VP L P      KT  SLR IYLE+GP AFA+AVR   GT++ DTTWRDAHQSLLATR+RT D+L +APAT++ALR AYS+E WGGATFDV+MRFL+E PWDRL+++REAVPDIPFQMLLRGANAVGYTSYPDNVV+KFCE+AQ+ GMDVFRVFDSLNYLENMRLGIDAVGAAGGI+EAAVCYTGD++D
Sbjct:   88 FVLNVLNHPDFINGVVDTGFIAANPQLLEPARSTNRGQKLLKXIGNTIVNGPEKELGATGPAPSKVDPLVPVLSPPTA--KKTGKSLRQIYLEDGPEAFARAVRQRDGTMLMDTTWRDAHQSLLATRLRTRDMLAIAPATAIALRNAYSIEMWGGATFDVAMRFLREDPWDRLSELREAVPDIPFQMLLRGANAVGYTSYPDNVVYKFCEKAQQTGMDVFRVFDSLNYLENMRLGIDAVGAAGGIIEAAVCYTGDVSD 343
[Close]
BLAST of mRNA_S-firma_M_contig9346.20313.1 vs. uniprot
Match: A0A2P4YRA0_9STRA (Pyruvate carboxylase (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YRA0_9STRA)

HSP 1 Score: 385 bits (988), Expect = 3.090e-123
Identity = 189/258 (73.26%), Postives = 219/258 (84.88%), Query Frame = 1 
Query:   10 FLLNVLKHPEFVDGTVNTSFIGENPLLLAPMRVSNRGQKMLKYIADVIVNGPDPSLGAVGGEPAILDPTVPSLDPAVDLPAKTEPSLRDIYLENGPAAFAKAVRDNKGTLITDTTWRDAHQSLLATRVRTADLLNVAPATSVALRKAYSLECWGGATFDVSMRFLKECPWDRLAKMREAVPDIPFQMLLRGANAVGYTSYPDNVVFKFCEEAQKAGMDVFRVFDSLNYLENMRLGIDAVGAAGGIVEAAVCYTGDITD 783
            FL NVL HP+F+ G V+TSFI ENP LL P + +NRGQKMLKYI + IVNGP+ +LGA G  P+ +DP +P+L+     PA  E SLR IY+E GP AFAKAVR  KG L+TDTTWRDAHQSLLATR+RT D+L +APATS+A+R A+SLE WGGATFDVSMRFL+E PWDRLA +REAVPDIPFQMLLRGANAVGYTSYPDNVV+KFCE+AQ  GMDVFRVFDSLNYLENM+LGIDAVGAAGGI+EAA+CYTGD++D
Sbjct:  453 FLTNVLNHPDFIKGVVDTSFIAENPDLLEPSKSTNRGQKMLKYIGNTIVNGPEKALGATGPAPSKVDPIIPTLNTP---PASKEKSLRQIYVEQGPEAFAKAVRAKKGLLLTDTTWRDAHQSLLATRMRTRDMLAIAPATSIAMRDAFSLEMWGGATFDVSMRFLREDPWDRLAILREAVPDIPFQMLLRGANAVGYTSYPDNVVYKFCEKAQATGMDVFRVFDSLNYLENMKLGIDAVGAAGGIIEAAMCYTGDVSD 707
[Close]
BLAST of mRNA_S-firma_M_contig9346.20313.1 vs. uniprot
Match: A0A7S1XKA9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XKA9_9STRA)

HSP 1 Score: 373 bits (957), Expect = 1.790e-122
Identity = 182/260 (70.00%), Postives = 217/260 (83.46%), Query Frame = 1 
Query:   10 FLLNVLKHPEFVDGTVNTSFIGENPLLLAPMRVSNRGQKMLKYIADVIVNGPDPSLGAVGGEPAILDPTVPSLDPAVDLPAKTEPSLRDIYLENGPAAFAKAVRDNKGTLITDTTWRDAHQSLLATRVRTADLLNVAPATSVALRKAYSLECWGGATFDVSMRFLKECPWDRLAKMREAVPDIPFQMLLRGANAVGYTSYPDNVVFKFCEEAQKAGMDVFRVFDSLNYLENMRLGIDAVGAAGGIVEAAVCYTGDITDTS 789
            F+LNVL+HPEF    V+T FI +NP LL P+R  NRGQK+L++IAD++VNGP  SLGA G  P+++DPT+P +  A   P+ T PSL+ I+   GP AFAKAVR++K  LITDTTWRDAHQSLLATRVRT DLL VAPAT+ AL  AYSLECWGGATFDVSMRFL ECPWDRLA++REAVP++PFQMLLRGAN VGYT+YPDNV++KFCE A+  GMDVFRVFDS+N +ENMRLGIDAVG AGGIVEAA+ YTGD++DT+
Sbjct:  187 FILNVLEHPEFRHSVVDTGFIAKNPSLLEPLRSQNRGQKLLRFIADMVVNGPPDSLGATGAAPSLVDPTIPEV--AAPAPSST-PSLKQIFDTQGPEAFAKAVRESKAALITDTTWRDAHQSLLATRVRTKDLLAVAPATANALSNAYSLECWGGATFDVSMRFLNECPWDRLAQLREAVPNVPFQMLLRGANGVGYTNYPDNVIYKFCEVAKNTGMDVFRVFDSVNDIENMRLGIDAVGQAGGIVEAAISYTGDVSDTT 443
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig9346.20313.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L2A7_9PHAE1.850e-16290.26Pyruvate carboxylase n=1 Tax=Ectocarpus sp. CCAP 1... [more]
D8LCR8_ECTSI2.730e-15890.19Pyruvate carboxylase n=2 Tax=Phaeophyceae TaxID=28... [more]
A0A835YR17_9STRA1.590e-12976.63Pyruvate carboxylase n=1 Tax=Tribonema minus TaxID... [more]
A0A7S2U4M9_9STRA1.560e-12772.48Hypothetical protein (Fragment) n=1 Tax=Attheya se... [more]
A0A5D6XYJ8_9STRA1.550e-12475.00Pyruvate carboxylase n=1 Tax=Pythium brassicum Tax... [more]
K3X778_GLOUD2.980e-12473.64Pyruvate carboxylase n=1 Tax=Globisporangium ultim... [more]
A0A4D9CY33_9STRA6.010e-12475.97Pyruvate carboxylase n=2 Tax=Monodopsidaceae TaxID... [more]
A0A2D4BQS3_PYTIN2.060e-12371.71Putative carboxylase n=1 Tax=Pythium insidiosum Ta... [more]
A0A2P4YRA0_9STRA3.090e-12373.26Pyruvate carboxylase (Fragment) n=1 Tax=Phytophtho... [more]
A0A7S1XKA9_9STRA1.790e-12270.00Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig9346contigS-firma_M_contig9346:1498..4028 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-19
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score483.0
Seed ortholog evalue8.8e-134
Seed eggNOG ortholog2880.D8LCR8
Preferred namePC
KEGG rclassRC00040,RC00367
KEGG koko:K01958
KEGG ReactionR00344
KEGG Pathwayko00020,ko00620,ko00720,ko01100,ko01120,ko01200,ko01230,map00020,map00620,map00720,map01100,map01120,map01200,map01230
KEGG ModuleM00173
GOsGO:0000166,GO:0003674,GO:0003824,GO:0004736,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0005759,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006082,GO:0006090,GO:0006094,GO:0006107,GO:0006732,GO:0006766,GO:0006767,GO:0006768,GO:0006790,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009374,GO:0009889,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0010468,GO:0010562,GO:0010605,GO:0010629,GO:0016020,GO:0016032,GO:0016051,GO:0016874,GO:0016885,GO:0017076,GO:0017144,GO:0019058,GO:0019068,GO:0019072,GO:0019074,GO:0019216,GO:0019220,GO:0019222,GO:0019318,GO:0019319,GO:0019752,GO:0019842,GO:0019866,GO:0030554,GO:0031090,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031406,GO:0031966,GO:0031967,GO:0031974,GO:0031975,GO:0032553,GO:0032555,GO:0032559,GO:0032787,GO:0033218,GO:0033293,GO:0034641,GO:0035639,GO:0035821,GO:0036094,GO:0040012,GO:0040017,GO:0042802,GO:0043167,GO:0043168,GO:0043177,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043436,GO:0043603,GO:0043648,GO:0043900,GO:0043902,GO:0043903,GO:0044237,GO:0044238,GO:0044281,GO:0044283,GO:0044403,GO:0044419,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0044788,GO:0044789,GO:0044791,GO:0044794,GO:0045834,GO:0045937,GO:0046364,GO:0046483,GO:0046889,GO:0046890,GO:0048037,GO:0048518,GO:0048519,GO:0048522,GO:0048524,GO:0050662,GO:0050789,GO:0050792,GO:0050794,GO:0051174,GO:0051186,GO:0051702,GO:0051704,GO:0051817,GO:0051851,GO:0060255,GO:0065007,GO:0070013,GO:0071071,GO:0071073,GO:0071704,GO:0080090,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901576,GO:1901681,GO:1902186,GO:1902188,GO:1903725,GO:1903727,GO:1903900,GO:1903902
EggNOG free text desc.pyruvate carboxylase activity
EggNOG OGsCOG1038@1,KOG0369@2759
EC6.4.1.1
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Hectar predicted targeting categoryother localisation
Exons5
Model size795
Cds size795
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig9346.20313.1prot_S-firma_M_contig9346.20313.1Sphaerotrichia firma Sfir_13m malepolypeptideS-firma_M_contig9346 1498..4028 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622828765.0325146-CDS-S-firma_M_contig9346:1497..15931622828765.0325146-CDS-S-firma_M_contig9346:1497..1593Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig9346 1498..1593 -
1697105148.9209733-CDS-S-firma_M_contig9346:1497..15931697105148.9209733-CDS-S-firma_M_contig9346:1497..1593Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig9346 1498..1593 -
1622828765.0463698-CDS-S-firma_M_contig9346:2121..23131622828765.0463698-CDS-S-firma_M_contig9346:2121..2313Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig9346 2122..2313 -
1697105148.9370792-CDS-S-firma_M_contig9346:2121..23131697105148.9370792-CDS-S-firma_M_contig9346:2121..2313Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig9346 2122..2313 -
1622828765.0589013-CDS-S-firma_M_contig9346:2625..28441622828765.0589013-CDS-S-firma_M_contig9346:2625..2844Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig9346 2626..2844 -
1697105148.9467692-CDS-S-firma_M_contig9346:2625..28441697105148.9467692-CDS-S-firma_M_contig9346:2625..2844Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig9346 2626..2844 -
1622828765.0721729-CDS-S-firma_M_contig9346:3366..35381622828765.0721729-CDS-S-firma_M_contig9346:3366..3538Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig9346 3367..3538 -
1697105148.964163-CDS-S-firma_M_contig9346:3366..35381697105148.964163-CDS-S-firma_M_contig9346:3366..3538Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig9346 3367..3538 -
1622828765.085633-CDS-S-firma_M_contig9346:3912..40281622828765.085633-CDS-S-firma_M_contig9346:3912..4028Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig9346 3913..4028 -
1697105148.9754975-CDS-S-firma_M_contig9346:3912..40281697105148.9754975-CDS-S-firma_M_contig9346:3912..4028Sphaerotrichia firma Sfir_13m maleCDSS-firma_M_contig9346 3913..4028 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-firma_M_contig9346.20313.1

>prot_S-firma_M_contig9346.20313.1 ID=prot_S-firma_M_contig9346.20313.1|Name=mRNA_S-firma_M_contig9346.20313.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=265bp
MQPFLLNVLKHPEFVDGTVNTSFIGENPLLLAPMRVSNRGQKMLKYIADV
IVNGPDPSLGAVGGEPAILDPTVPSLDPAVDLPAKTEPSLRDIYLENGPA
AFAKAVRDNKGTLITDTTWRDAHQSLLATRVRTADLLNVAPATSVALRKA
YSLECWGGATFDVSMRFLKECPWDRLAKMREAVPDIPFQMLLRGANAVGY
TSYPDNVVFKFCEEAQKAGMDVFRVFDSLNYLENMRLGIDAVGAAGGIVE
AAVCYTGDITDTSS*
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mRNA from alignment at S-firma_M_contig9346:1498..4028-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-firma_M_contig9346.20313.1 ID=mRNA_S-firma_M_contig9346.20313.1|Name=mRNA_S-firma_M_contig9346.20313.1|organism=Sphaerotrichia firma Sfir_13m male|type=mRNA|length=2531bp|location=Sequence derived from alignment at S-firma_M_contig9346:1498..4028- (Sphaerotrichia firma Sfir_13m male)
ATGCAGCCGTTCCTCCTGAACGTGCTCAAGCACCCCGAATTCGTGGACGG
CACCGTCAACACCTCCTTCATCGGGGAGAACCCGCTCCTCCTCGCCCCCA
TGCGCGTCTCCAACCGGTGCGTCAAGATGAAACAAAACGCACATCGAACT
CAAGGAAACACGATTCGAATGCCCGCGAGGAGAGGCGAAGGCTCAGCTCC
ACGTCTCGCCGCCGCGTTTTGCAGACCGTGGTGACAACCAAACCACCTGC
CGCTTATTCTCAATTCGCGCGTAAATGAAAACAGCCAAAAAGCTTGACGC
TGGGGACATTTCGTCCACGCTCACGTGGAAACCCACGCGCGTTTCGCGGC
GCGTGTTGGTACATGGACGTGTGTCAGCCGCGAACCTCCCGTACTTGCCC
GGACGTCTAAACCTCCGCGCCCCCCCCGCGCCCCCCTCCCTCCTCTATTT
CCGCCTTTTTTTTATATGTTTCTCTCCAACACAAAAAAAGTGGGCAGAAG
ATGCTCAAGTACATCGCCGACGTGATCGTGAACGGGCCGGACCCGTCCCT
CGGCGCCGTCGGCGGGGAGCCTGCCATCCTCGACCCCACCGTGCCCAGCC
TCGACCCGGCCGTCGACCTGCCCGCGAAGACCGAGCCGAGCCTGCGCGAC
ATCTACCTAGAGGTGCGAGAATCGTTGCTAGGTTTTGGGTTGTGAGGGGG
TGCTGCAATGTGGGACTCTGGTGTGATGCTGCTGTCTGTGCGACATCTAC
CTAGATATGTAGAGGTGGGAGAATCGATGCTAGGTTTTGGGTCGTGAGTG
GGTGCTGCAATGTGGGACTCTGGTTTGATGCTGTCTGTGCGACATCTACC
TAGATATGTTAGAGGTGGGAGCATCGATTTTCGGGTTGGGTTGGGTCGGC
AGGTTGGCAGGTTGTGCTTGGAGGTGCTTTGTTTGATACTCTGTTCGGAA
GTTGTTTCGTTCGCCGTGAACGGAAAAAAAGGGTGTCGTCGTTGGTGACG
ACACCGACAGACAGGCAGATAGACAAGAACACGCCGAGATGTTCATTGTT
TACCCCTCTTGTCCTGCTTTTCTGGCTCCCACTTCATCGCTGTCCGCCTC
CCGTCTCGCTCACCAAGAAGAAAAAAAACGCTCCCTGTCTGTTGTTTTTT
TTTCCCAATGTGTCGTGGCATTTTCGTTTACCAGAACGGCCCAGCGGCGT
TCGCCAAGGCGGTCCGCGACAACAAGGGGACTCTCATCACTGACACCACT
TGGCGGGACGCCCACCAGTCGCTGCTGGCCACGCGCGTGCGCACGGCGGA
CCTGCTCAACGTCGCCCCGGCCACGTCGGTCGCGCTCCGCAAGGCGTACA
GCCTGGAGTGCTGGGGGGGCGCCACCTTCGACGTGTCGATGCGGTTCCTC
AAGGTTGGTGTGATTGGTCAGGCGTGGGTGGTGTGTCTGATGCGCCTTTG
TTGGTGTGGTAGGGCATTGTAACGGGGGGCCTTGTGTAGTTTTTTTTGTG
TGTTGTGTCGACTCCTCAGACTGTTTACCAAGCAAGCTGCTTCTTAGTGT
GGTGGAGGCTCCTCGAGGTGGTGCTTCTAGTGTGGTGCCTCGTGGTTCAC
GCATCACATTTGCACATATCAAGTAAAACCCCATCTTCTTTGTTGCATGA
TTTCCACTGAGTGATCGTCGTTTGCTTAAATTAAAACACACCGCTCTTTT
CCGCGCGTGCTGCAGGAGTGCCCGTGGGATCGGCTGGCCAAGATGCGGGA
GGCCGTGCCCGACATCCCCTTCCAGATGCTGCTGAGGGGGGCCAACGCAG
TCGGCTACACGTCCTACCCGGACAACGTGGTGTTCAAGTTCTGCGAGGAG
GCGCAGAAGGCCGGCATGGACGTCTTCCGTGTGTTCGACAGCCTCAACTA
CCTCGAGGTGAGGCCGGTCACTGTTGTAGTCTACGCCGCGGTCGGCCGGT
GGGGCGGCAAACGCAAGGCGTGGAATGAACGAAGCATGTGTGTCTTCCGT
ATCGAGGAATCCGCAGCGGTTTGTTGTGTTGTGTTGAGGACTCCGGGTGT
GGGAAAGCCTCGATTACCTCGACGTCGGTCGGTCGGTTAGTCGCAGGGCC
TCACGTGCGAAACGCATTGAACATGTTTTCAGCACCGCTTCATGAGCTGG
AGACAACCGCCCTTCGGGCGGGTATGTTTGTACGGTAGTACGCTCCATGT
GGTGTGGTGCTCGCCTTCGCCGGGTGTGCTTGGGCCGCTCGAGGCGCGTC
GAGATGCCAGCGCTCGACGGTCTCTTGTTTCGTTTTGTCTTTCGCGTGTT
GATTGTTTTTTTCAGACCATCTCTGTCGAAGGAAGTCTTCGATTCTCTTT
GTCCGCCATGTTTGGAACGTCTGTAGGAGCATCTAACGTTTCCGACTCCG
CCTTTTGGTTTTTATTCTCCTCTCGTTTTGTGCAGAACATGCGCTTGGGC
ATCGACGCCGTGGGAGCGGCCGGCGGGATCGTGGAGGCGGCCGTGTGCTA
CACCGGGGACATCACCGACACCTCATCGTAA
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Coding sequence (CDS) from alignment at S-firma_M_contig9346:1498..4028-

>mRNA_S-firma_M_contig9346.20313.1 ID=mRNA_S-firma_M_contig9346.20313.1|Name=mRNA_S-firma_M_contig9346.20313.1|organism=Sphaerotrichia firma Sfir_13m male|type=CDS|length=1590bp|location=Sequence derived from alignment at S-firma_M_contig9346:1498..4028- (Sphaerotrichia firma Sfir_13m male)
ATGCAGCCGTTCCTCCTGAACGTGCTCAAGCACCCCGAATTCGTGGACGG
CACCGTCAACACCTCCTTCATCGGGGAGAACCCGCTCCTCCTCGCCCCCA
TGCGCGTCTCCAACCGATGCAGCCGTTCCTCCTGAACGTGCTCAAGCACC
CCGAATTCGTGGACGGCACCGTCAACACCTCCTTCATCGGGGAGAACCCG
CTCCTCCTCGCCCCCATGCGCGTCTCCAACCGTGGGCAGAAGATGCTCAA
GTACATCGCCGACGTGATCGTGAACGGGCCGGACCCGTCCCTCGGCGCCG
TCGGCGGGGAGCCTGCCATCCTCGACCCCACCGTGCCCAGCCTCGACCCG
GCCGTCGACCTGCCCGCGAAGACCGAGCCGAGCCTGCGCGACATCTACCT
AGAGTGGGCAGAAGATGCTCAAGTACATCGCCGACGTGATCGTGAACGGG
CCGGACCCGTCCCTCGGCGCCGTCGGCGGGGAGCCTGCCATCCTCGACCC
CACCGTGCCCAGCCTCGACCCGGCCGTCGACCTGCCCGCGAAGACCGAGC
CGAGCCTGCGCGACATCTACCTAGAGAACGGCCCAGCGGCGTTCGCCAAG
GCGGTCCGCGACAACAAGGGGACTCTCATCACTGACACCACTTGGCGGGA
CGCCCACCAGTCGCTGCTGGCCACGCGCGTGCGCACGGCGGACCTGCTCA
ACGTCGCCCCGGCCACGTCGGTCGCGCTCCGCAAGGCGTACAGCCTGGAG
TGCTGGGGGGGCGCCACCTTCGACGTGTCGATGCGGTTCCTCAAGAACGG
CCCAGCGGCGTTCGCCAAGGCGGTCCGCGACAACAAGGGGACTCTCATCA
CTGACACCACTTGGCGGGACGCCCACCAGTCGCTGCTGGCCACGCGCGTG
CGCACGGCGGACCTGCTCAACGTCGCCCCGGCCACGTCGGTCGCGCTCCG
CAAGGCGTACAGCCTGGAGTGCTGGGGGGGCGCCACCTTCGACGTGTCGA
TGCGGTTCCTCAAGGAGTGCCCGTGGGATCGGCTGGCCAAGATGCGGGAG
GCCGTGCCCGACATCCCCTTCCAGATGCTGCTGAGGGGGGCCAACGCAGT
CGGCTACACGTCCTACCCGGACAACGTGGTGTTCAAGTTCTGCGAGGAGG
CGCAGAAGGCCGGCATGGACGTCTTCCGTGTGTTCGACAGCCTCAACTAC
CTCGAGGAGTGCCCGTGGGATCGGCTGGCCAAGATGCGGGAGGCCGTGCC
CGACATCCCCTTCCAGATGCTGCTGAGGGGGGCCAACGCAGTCGGCTACA
CGTCCTACCCGGACAACGTGGTGTTCAAGTTCTGCGAGGAGGCGCAGAAG
GCCGGCATGGACGTCTTCCGTGTGTTCGACAGCCTCAACTACCTCGAGAA
CATGCGCTTGGGCATCGACGCCGTGGGAGCGGCCGGCGGGATCGTGGAGG
CGGCCGTGTGCTACACCGGGGACATCACCGACACCTCATCGTAAAACATG
CGCTTGGGCATCGACGCCGTGGGAGCGGCCGGCGGGATCGTGGAGGCGGC
CGTGTGCTACACCGGGGACATCACCGACACCTCATCGTAA
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