mRNA_S-firma_M_contig93.20250.1 (mRNA) Sphaerotrichia firma Sfir_13m male
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Overview
Homology
BLAST of mRNA_S-firma_M_contig93.20250.1 vs. uniprot
Match: A0A6H5JET5_9PHAE (3Beta_HSD domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JET5_9PHAE) HSP 1 Score: 544 bits (1402), Expect = 1.790e-187 Identity = 312/513 (60.82%), Postives = 365/513 (71.15%), Query Frame = 3
Query: 54 MLLMLAPLTGVGSVVGTNVVLCGGGTSSVGSKLADAISDGASTADLRRCSPLLE-WEGLKDICNGAETVYLLSALDLPPLPTDSALEAFTSGVSRVVDCCLECGVESLVFTSSSNVVSSRIQGQGQERTDGASVDAVEEKLSYVTRQEDTKAHAVARAEARVLEASGASSSSRLHTCALRPAPVVYGHRTPEKDSLLHRTLSWLGWGLNRVAVGSK-NDSGALTSGMVHVDNLVEAHVLAGTSLKTVPQDSGIRQGKVERREAE-DTDAGAETA-ADEAGAERTSAGTAPACSGQAYFVADGQPCNPQAFLDGVLDGLGFATSKVVRVPTRVALFVAWVAELICKAGVTPTPVLTRSDVRALTETR-PFTNARAQRDLGYVPRVDPTTASKKIVQSLKRAGWAKHQVSRPGLAYWVCNPGGIWLTTLAAFGGPCPPFLAPLARKAELVGLSLLHQTSTVRAVCMAVYVIHALEAVYAYRVAQGAGHRDTAPGWMAQTFLLGFPSIFLVNKLPK 1577
ML++ P SV +VVL GGG S GS LA I+ A A++R SPLLE WEGLK++C GA+TVYLLSALDLPP P DS L+AFT+GVSRVVDCCLECGVE LVFTSSS+V SS + QG + ++D KA VARAEARVL+ASGA+S S LHTCALRPA +YG EKD LHR L W+GWGLNRVAVG K + G + MVHVDNL EAH+LAG LK ++ + + A D AG E A A++ + + APAC+G+AY V DGQP NPQAFLD +LDGLGFATSK++RVPT VAL VA VAEL+CK G+T P LTRSD+R LTE R +NARAQRD GYVPRVDP TA+K+ V+SLKR GWA+H+V RP LAYW+ NPGGIWL TLAAFGGPCPPF LAR A VGL LL + STVRAVC+AVY++H LE VYA+RVA AGHRD APGW AQTFLLGFPS+FLVN L +
Sbjct: 1 MLILAQPSASSASV---SVVLHGGG--SFGSTLAGRIATAAIPAEVRS-SPLLENWEGLKEVCTGADTVYLLSALDLPPSPNDSDLQAFTAGVSRVVDCCLECGVEGLVFTSSSSVFSSAEKAQGPTEHE---------------EEDDVKARTVARAEARVLDASGATSPSHLHTCALRPAAFIYG--LSEKDGPLHRALLWVGWGLNRVAVGPKCPEDGGVKVDMVHVDNLAEAHLLAGAKLK--------KRAETDAPNAMVDVGAGVEGADAEQRRGPGSKSEAAPACAGRAYDVTDGQPRNPQAFLDEILDGLGFATSKLLRVPTSVALLVARVAELLCKVGITTAPALTRSDIRGLTEARRTHSNARAQRDFGYVPRVDPATATKRTVESLKRDGWARHRVRRPALAYWITNPGGIWLVTLAAFGGPCPPFTEALARSAGHVGLRLLKEQSTVRAVCIAVYLVHVLEGVYAFRVAWHAGHRDAAPGWFAQTFLLGFPSVFLVNDLKR 482
BLAST of mRNA_S-firma_M_contig93.20250.1 vs. uniprot
Match: D7FV37_ECTSI (3Beta_HSD domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV37_ECTSI) HSP 1 Score: 524 bits (1350), Expect = 4.130e-180 Identity = 283/462 (61.26%), Postives = 332/462 (71.86%), Query Frame = 3
Query: 225 LKDICNGAETVYLLSALDLPPLPTDSALEAFTSGVSRVVDCCLECGVESLVFTSSSNVVSSRIQGQGQERTDGASVDAVEEKLSYVTRQEDTKAHAVARAEARVLEASGASSSSRLHTCALRPAPVVYGHRTPEKDSLLHRTLSWLGWGLNRVAVGSK-NDSGALTSGMVHVDNLVEAHVLAGTSLKTVPQDSGIRQGKVERREAEDTDAGAET---AADEAGAERTSAGTAPACSGQAYFVADGQPCNPQAFLDGVLDGLGFATSKVVRVPTRVALFVAWVAELICKAGVTPTPVLTRSDVRALTETR-PFTNARAQRDLGYVPRVDPTTASKKIVQSLKRAGWAKHQVSRPGLAYWVCNPGGIWLTTLAAFGGPCPPFLAPLARKAELVGLSLLHQTSTVRAVCMAVYVIHALEAVYAYRVAQGAGHRDTAPGWMAQTFLLGFPSIFLVNKLPKKQERLK 1595
+ +C GA+TVYLLSALDLPP P DS L+AFT+GVSRV++CCLECGVE LVFTSSS+V SS + QG +G ++D KA AVARAEARVL+ASGA+S SRLHTCALRPA VYG T EKD LHR LSW+GWGL+RVAVG K + G + MVH+DNL EAH+LAG LK ++ V D GA+ AA++ + APAC+G+AY V DGQP NPQAFLD +LDGLGFATSK++RVPT VAL AWVAEL+CK G+T P LTRSD+R LTE R +NARAQRD GYVPRVDP A K+ V+SLKR GWA+H+V RP LAYW+ NPGGIWL TLAAFGGPCP F PLAR A VGL LL + STVRAVC+AVY++H LE VYA+RVA+ AGHRD APGW AQTFLLGFPS+FLVN L + + K
Sbjct: 18 ISQVCTGADTVYLLSALDLPPSPNDSDLQAFTAGVSRVIECCLECGVEGLVFTSSSSVFSSAEKAQGPTEHEG---------------EDDMKARAVARAEARVLDASGATSPSRLHTCALRPAAFVYG--TSEKDGPLHRALSWVGWGLDRVAVGPKCPEDGGVKVDMVHLDNLAEAHLLAGARLKKKRAETDAPNAMV--------DVGADVGGAAAEQRRGPGSKTEAAPACAGKAYDVTDGQPRNPQAFLDEILDGLGFATSKLLRVPTTVALLAAWVAELLCKVGITTAPALTRSDIRGLTEARRTHSNARAQRDFGYVPRVDPAAAIKRTVESLKRDGWARHRVRRPALAYWITNPGGIWLVTLAAFGGPCPAFAEPLARSAGHVGLRLLKEQSTVRAVCIAVYLVHVLEGVYAFRVARHAGHRDAAPGWFAQTFLLGFPSVFLVNDLKRAESTSK 454
BLAST of mRNA_S-firma_M_contig93.20250.1 vs. uniprot
Match: D8LSA6_ECTSI (3Beta_HSD domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSA6_ECTSI) HSP 1 Score: 252 bits (644), Expect = 1.990e-75 Identity = 157/348 (45.11%), Postives = 199/348 (57.18%), Query Frame = 3
Query: 570 LHTCALRPAPVVYGHRTPEKDSLLHRTLSWLGWGLNRVAVGSKNDSGALTSGMVHVDNLVEAHVLAGTSLKTVPQDSGIRQGKVERREAEDTDAGAETAAD-EAGAERTSAGTAPACSGQAYFVADGQ------------PCNPQAFLDGVLDGLGFATSKVVRVPTRVALFVAWVAELICKAGVTPTPV-LTRSDVRALTETRPFTNARAQRDLGYVPRVDPTTASKKIVQSLKRAGWAKHQVSRPGLAYWVCNPGGIWLTTLAAFGGPCPPFLAPLARKAELVGLSLLHQTSTVRAVCMAVYVIHALEAVYAYRVAQGAGHRDTAPGWMAQTFLLGFPSIFLVNKL 1571
L+TCALRP +VYG KD L R LSW+GWGLNRV + ++ S M+ NL++A VLAGT L AE AA +AG S PACSGQ+Y V DGQ P QAF+DGVL+GL F TSKV+R+P AL +AW EL+CK +T P +TRS+VR L E R RA++DLGY PRVD TA + IV+ LKR GW +H + PGL YW+C P GIWL +AAF CP FLAP+ R + + L++ + VR VC+ + H LE YA+ A+ AGH DTAP W+ QT +LG+PS LV +L
Sbjct: 47 LYTCALRPG-LVYG---AGKDEPLLRALSWMGWGLNRVTLRGLPEA---KSDMIFFQNLIDATVLAGTQL-------------------------AEGAAGAQAGGAGWSTRKGPACSGQSYCVTDGQRGGGDGDGGGVQPGGLQAFMDGVLEGLDFTTSKVLRLPVFFALAIAWAMELVCKMKLTEAPPSITRSEVRKLVENRCSDIERARKDLGYEPRVDRNTALRTIVEDLKRDGWGRHTLLVPGLGYWICIPLGIWLNAVAAFKALCPAFLAPVQRFSLYIHLAVFRKLWIVRLVCVLAILAHVLEGWYAFVRAKRAGHGDTAPRWLIQTLILGYPSTRLVMRL 362
BLAST of mRNA_S-firma_M_contig93.20250.1 vs. uniprot
Match: B4FG67_MAIZE (NAD(P)-binding Rossmann-fold superfamily protein n=3 Tax=Zea mays TaxID=4577 RepID=B4FG67_MAIZE) HSP 1 Score: 109 bits (272), Expect = 8.140e-22 Identity = 124/432 (28.70%), Postives = 190/432 (43.98%), Query Frame = 3
Query: 309 EAFTSGVSRVVDCCLECGVESLVFTSSSNVVSSRIQGQGQERTDGASVDAVEEKLSYVTRQEDTKAHAVAR--AEARVLEASG----ASSSSRLHTCALRPAPVVYGHRTPEKDSLLHRTLSWLGWGLNRVAVGSKNDSGALTSGMVHVDNLVEAHVLAGTSL-KTVPQDSGIRQGKVERREAEDTDAGAETAADEAGAERTSAGTAPACSGQAYFVADGQPCNPQAFL-DGVLDGLGFATSKVVR------VPTRVALFVAWVAELICKAGVTPTPVLTRSDVRALTETRPFTNARAQRDLGYVPRVDP---TTASKKIVQSLKRAGWAKHQVSRPGLAYWVCNPGGIWLTTLAAFGGPCPPFLAPLARKAELVGLSLLHQTSTVRAVCMAVYVIHALEAVYAYRVAQGAGHRDTAPGWMAQTFLLGFPSI 1553
E +G V+D C E GV LV+ S+ NVV G+ +G E L Y ++ A+ ++ AE VL+++G + SSRL+TCA+RPA +YG P ++ R LS GL +G D G T V++DNLV A +LA L +P G P +GQAYF+ DG PCN F+ + LG++ +VV +R+ LF++ + + P P++ ++V + T F+ +A+ +LGYVP V P A+ Q KR ++ P + W+ + + LA F C P + PL + V + + +R V +HA EAVYA+ +A+ R+ A GW QTF LG+ S+
Sbjct: 103 EVNINGTCNVLDACHEQGVRRLVYVSTYNVVFG-----GKPIVNG------NEALPYFPIEDHVDAYGRSKSVAEQLVLKSNGRPAKSDKSSRLYTCAIRPA-AIYG---PGEERHFPRILSLAKLGLAFFKIG---DPGVKTD-WVYIDNLVLALILASMGLLDDIPDRKGT----------------------------------PVAAGQAYFICDGSPCNTFEFIIKPLFQSLGYSVPQVVLDTSVALAVSRIFLFISTLFYPWLDSKWMPQPLILPAEVYKVGVTHYFSFLKAREELGYVPIVRPHEGLAATISYWQERKRM-----ELDGPTIFTWLA----VTIGMLAVFSAACLPPVGPLKWVLD-VHMFVFRSMLVIRLVLAVAIALHAGEAVYAWFLARRVDPRNAA-GWFWQTFALGYFSL 470
BLAST of mRNA_S-firma_M_contig93.20250.1 vs. uniprot
Match: A0A2K2D4V8_BRADI (3Beta_HSD domain-containing protein n=4 Tax=Brachypodium distachyon TaxID=15368 RepID=A0A2K2D4V8_BRADI) HSP 1 Score: 103 bits (256), Expect = 8.990e-20 Identity = 123/428 (28.74%), Postives = 190/428 (44.39%), Query Frame = 3
Query: 321 SGVSRVVDCCLECGVESLVFTSSSNVVSSRIQGQGQERTDGASVDAVEEKLSYVTRQEDTKAHAVAR--AEARVLEASG----ASSSSRLHTCALRPAPVVYGHRTPEKDSLLHRTLSWLGWGLNRVAVGSKNDSGALTSGMVHVDNLVEAHVLAGTSLKTVPQDSGIRQGKVERREAEDTDAGAETAADEAGAERTSAGTAPACSGQAYFVADGQPCNPQAFLDGVL-DGLGFATSKVVRVPTRVALFVAWVAELICK-------AGVTPTPVLTRSDVRALTETRPFTNARAQRDLGYVPRVDPT---TASKKIVQSLKRAGWAKHQVSRPGLAYWVCNPGGIWLTTLAAFGGPCPPFLAPLARKAELVGLSLLHQTSTVRAVCMAVYVIHALEAVYAYRVAQGAGHRDTAPGWMAQTFLLGFPSI 1553
+G V+D C E GV LV+ S+ NVV G+ +G E L Y ++ A+ ++ AE VL+++ +S S+RL+TCA+RPA +YG P ++ L R LS GL +G N + + ++VDNLV A +LA L D R+G P +GQAYF+ DG P N F+ L LG+A +V ++ T +AL ++ IC + P++ ++V + T F+ +A+ +LGYVP P A+ Q KR ++ P + W+ + + LA F C P + PL + + L + + +R V +A V HA E VYA+ +A+ R+ A GW QTF LG S+
Sbjct: 107 NGTCNVLDACHEHGVRRLVYVSTYNVVFG-----GEPIVNG------NETLPYFPIEDHVDAYGRSKSIAEQLVLKSNARQAKSSKSTRLYTCAIRPA-AIYG---PGEERHLPRILSLAKLGLAFFKIGGPN----VKTDWLYVDNLVLALILASMGLL---DDIPGRKGT------------------------------PVAAGQAYFICDGAPVNTFEFIISPLFRSLGYAVPRV-KLDTPIALAISRFFLFICTLFYPWLDSKWIAQPLILPAEVYKVGVTHYFSFLKAKEELGYVPMTSPREGLAATISYWQERKR-----RELDGPTIFTWLA----VTIGMLAIFSAACLPPVGPL-KWLLAIHLFVFRKMLVIRLVFLAAVVAHAAEGVYAWFLAKKVDPRNAA-GWFWQTFALGVFSL 470
BLAST of mRNA_S-firma_M_contig93.20250.1 vs. uniprot
Match: UPI00201EB207 (short-chain dehydrogenase/reductase family 42E member 1-like isoform X1 n=2 Tax=Haliotis rufescens TaxID=6454 RepID=UPI00201EB207) HSP 1 Score: 100 bits (249), Expect = 3.210e-19 Identity = 104/360 (28.89%), Postives = 160/360 (44.44%), Query Frame = 3
Query: 243 GAETVYLLSALDLP---PLPTDSALEAFTSGVSRVVDCCLECGVESLVFTSSSNVVSSRIQGQGQERTDGASVDAVEEKLSYVTRQEDTKAHAVAR--AEARVLEASGASSS--SRLHTCALRPAPVVYGHRTPEKDSLLHRTLSWLGWGLNRVAVGSKNDSGALTSGMVHVDNLVEAHVLAGTSLKTVPQDSGIRQGKVERREAEDTDAGAETAADEAGAERTSAGTAPACSGQAYFVADGQPCNPQAFLDGVLDGLGFATSKVVRVPTRVALFVAWVAELICKAG---VTPTPVLTRSDVRALTETRPFTNARAQRDLGYVPRVDPTTASKKIVQSLKRAGWAKHQVSRPGLAYWVCN 1292
GA VY +++ + L E G VV C +C V LV+TS+ NVV GQE DG +E L Y+T + T+ +++ + +E +VL A+G+ ++ S LHTCALR A V YG P + + R +S+L GL V G+K+ +HVDNLV+AH LAG L +D G +GQAYF+ D +P N F +++GLG+ V +P + A++ E++ P+LTR++V T F+ ++A LGY P + +V+ ++ G H+ GL Y + N
Sbjct: 73 GANVVYHMASYGMSGREQLNRKLIQEVNIGGTENVVKACRDCNVTRLVYTSTYNVVFG-----GQEIRDG------DESLPYLTEDKFTEYYSLTKMHSEKKVLGANGSQTADGSVLHTCALRLAGV-YG---PGEQRHIPRIVSYLEQGLVAVTYGAKDS----LVDFLHVDNLVQAHTLAGRGLS---RDRGH-----------------------------------IAAGQAYFICDDKPINNFEFFRPLIEGLGYRY-PTVNLPLLPVFYFAFITEIVHSVIGRIYNFQPLLTRTEVYKTGVTHTFSISKAHSQLGYSPTLQNDLTG--VVRHYQKMGRVYHKPRTSGLRYSIEN 372
BLAST of mRNA_S-firma_M_contig93.20250.1 vs. uniprot
Match: A0A8K1GWV0_9PASS (Uncharacterized protein n=1 Tax=Zosterops borbonicus TaxID=364589 RepID=A0A8K1GWV0_9PASS) HSP 1 Score: 94.4 bits (233), Expect = 1.230e-16 Identity = 95/296 (32.09%), Postives = 137/296 (46.28%), Query Frame = 3
Query: 324 GVSRVVDCCLECGVESLVFTSSSNVVSSRIQGQGQERTDGASVDAVEEKLSYVTRQ--EDTKAHAVARAEARVLEASGASSSSR---LHTCALRPAPVVYGHRTPEKDSLLHRTLSWLGWGLNRVAVGSKNDSGALTSGMVHVDNLVEAHVLAGTSLKTVPQDSGIRQGKVERREAEDTDAGAETAADEAGAERTSAGTAPACSGQAYFVADGQPCNPQAFLDGVLDGLGFATSKVVRVPTRVALFVAWVAELI-CKAGVTPT--PVLTRSDVRALTETRPFTNARAQRDLGYVPR 1187
G V+ C GV SLV+TS+ NV+ GQ E D E L Y+ D + + AE +VLEA+GA + L TCALRPA + YG P + L R +S++ GL + G D +L VHVDNLV+AHVLA +L+ Q +GQAYF++DG+P N F +++GLG+ +R+P + F A++ EL+ C G P+LTR++V T F+ +A+++LGY PR
Sbjct: 345 GTENVIQACKSRGVSSLVYTSTYNVI---FGGQIIENGD--------ESLPYLPLHLHPDHYSRTKSLAEMKVLEANGAELGNGRGVLRTCALRPAGI-YG---PGEQRHLPRIVSYIERGLFKFVYG---DPLSLVE-FVHVDNLVQAHVLASEALRASKQH--------------------------------------VAAGQAYFISDGRPVNNFEFFRPLVEGLGYKF-PTLRLPLSLVYFFAFLTELVHCLVGRVYNFQPLLTRTEVYKTGVTHYFSMDKARKELGYEPR 582
BLAST of mRNA_S-firma_M_contig93.20250.1 vs. uniprot
Match: A0A3M7KZD4_AUXPR (3Beta_HSD domain-containing protein n=2 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A3M7KZD4_AUXPR) HSP 1 Score: 92.0 bits (227), Expect = 1.630e-16 Identity = 108/337 (32.05%), Postives = 143/337 (42.43%), Query Frame = 3
Query: 225 LKDICNGAETVYLLSALDLP---PLPTDSALEAFTSGVSRVVDCCLECGVESLVFTSSSNVVSSRIQGQGQERTDGASVDAVEEKLSYVTRQE--DTKAHAVARAEARVLEASGAS--------SSSRLHTCALRPAPVVYGHRTPEKDSLLHRTLSWLGWGLNRVAVGSKNDSGALTSGMVHVDNLVEAHVLAGTSLKTVPQDSGIRQGKVERREAEDTDAGAETAADEAGAERTSAGTAPACSGQAYFVADGQPCNPQAFLDGVLDGLGFATSKVVRVPTRVALFVAWVAELICKAGVTPT----PVLTRSDVRALTETRPFTNARAQRDLGYVP 1184
L+ I GA+ V+ ++ + L T G VV C+ CGV SLV+TS+ N V G + A +E L D + A AE VL A GA RLHT ALRPA +YG + L RT+ G + G + +LT MVHVDNLVEAHVLA SL G E A GQAYF++DG P N F + +L GLGF T + R+P V +AW+ ELI + V P P+L R++V + T F+ +A+ +LGY P
Sbjct: 38 LQGIFQGADVVFHTASYGMSMREQLHTVIIHAVNVQGTDNVVAACIACGVPSLVYTSTYNTVFG-----------GVEIVAGDESLPLFPLDAHCDAYSRTKALAEQAVLAADGARHVGKDGDPGRGRLHTTALRPA-AIYG---AGERRHLPRTVENARRGWYKCTFGKPS---SLTD-MVHVDNLVEAHVLAARSLAHAN--------------------GGEAA------------------GQAYFISDGSPINMFRFFEPLLVGLGFPTPHL-RLPLLVVYCLAWLTELIWQV-VHPVWDFEPLLVRAEVLKVGVTHYFSIDKARTELGYAP 315
BLAST of mRNA_S-firma_M_contig93.20250.1 vs. uniprot
Match: V3ZLZ9_LOTGI (3Beta_HSD domain-containing protein n=1 Tax=Lottia gigantea TaxID=225164 RepID=V3ZLZ9_LOTGI) HSP 1 Score: 91.7 bits (226), Expect = 2.890e-16 Identity = 95/331 (28.70%), Postives = 152/331 (45.92%), Query Frame = 3
Query: 324 GVSRVVDCCLECGVESLVFTSSSNVVSSRIQGQGQERTDGASVDAVEEKLSYVTRQEDTKAHAVARAEA--RVLEASGASSS---SRLHTCALRPAPVVYGHRTPEKDSLLHRTLSWLGWGLNRVAVGSKNDSGALTSGMVHVDNLVEAHVLAGTSLKTVPQDSGIRQGKVERREAEDTDAGAETAADEAGAERTSAGTAPACSGQAYFVADGQPCNPQAFLDGVLDGLGFATSKVVRVPTRVALFVAWVAELICKAG---VTPTPVLTRSDVRALTETRPFTNARAQRDLGYVPRVDPTTASKKIVQSLKRAGWAKHQVSRPGLAYWVCN 1292
G V+ C E ++ LVFTS+ NVV G+E +G +E L Y++ + T ++ + EA +VL+ + +S +RL+TCALR A V YG P + + R +S++ GL V G+K +HVDNLV+ H+LAG +L S + KV +GQ YF++DG+P N F + + LG+ K+ R+P V ++A++ E+I P+LTR++V T F+ +A +LGY P V + ++V+ ++ G K S L Y+ N
Sbjct: 98 GTENVIKACYENNIKRLVFTSTYNVVYG-----GEEIING------DESLPYLSDHKFTDQYSKTKREAEEKVLDVNNTVTSDGHTRLYTCALRLAGV-YG---PGEQRHIPRIVSYIEQGLTVVIYGAKESK----VDFLHVDNLVQGHILAGQAL------SKHKNQKV--------------------------------AGQVYFLSDGKPINNFEFFRPLFEDLGYTYPKI-RLPFNVIFYMAFLIEIIHSIVGRFYNFQPLLTRTEVYKTGITHYFSINKASEELGYKPTVQNDLS--QVVKYYQKIGRVKQPKSSKTLKYYFVN 368
BLAST of mRNA_S-firma_M_contig93.20250.1 vs. uniprot
Match: U3GNX1_9FRIN (Short-chain dehydrogenase/reductase family 42E-like protein (Fragment) n=14 Tax=Fringillidae TaxID=9133 RepID=U3GNX1_9FRIN) HSP 1 Score: 89.4 bits (220), Expect = 2.920e-16 Identity = 93/296 (31.42%), Postives = 136/296 (45.95%), Query Frame = 3
Query: 324 GVSRVVDCCLECGVESLVFTSSSNVVSSRIQGQGQERTDGASVDAVEEKLSYVTRQ--EDTKAHAVARAEARVLEASGASSSSR---LHTCALRPAPVVYGHRTPEKDSLLHRTLSWLGWGLNRVAVGSKNDSGALTSGMVHVDNLVEAHVLAGTSLKTVPQDSGIRQGKVERREAEDTDAGAETAADEAGAERTSAGTAPACSGQAYFVADGQPCNPQAFLDGVLDGLGFATSKVVRVPTRVALFVAWVAELI-CKAG--VTPTPVLTRSDVRALTETRPFTNARAQRDLGYVPR 1187
G V+ C GV SLV+TS+ NV+ GQ E D E L Y+ D + + AE +VLEA+GA + L TCALRPA + YG P + L R +S++ GL + G D +L VHVDNLV+AHVLA +L+ Q +GQAYF++DG+P N F +++GLG+ VR+P + F A++ E++ G P+LTR++V T F+ +A+++LGY P+
Sbjct: 9 GTENVIQACKSRGVSSLVYTSTYNVI---FGGQIIENGD--------ESLPYLPLHLHPDHYSRTKSLAEMKVLEANGAELGNGRGVLRTCALRPAGI-YG---PGEQRHLPRIVSYIERGLFKFVYG---DPLSLVE-FVHVDNLVQAHVLASEALRASKQHIA--------------------------------------AGQAYFISDGRPVNNFEFFRPLVEGLGYKF-PTVRLPLSLVYFFAFLTEIVHFLVGHIYNFQPLLTRTEVYKTGVTHYFSMGKARKELGYEPQ 246 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig93.20250.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_M_contig93.20250.1 >prot_S-firma_M_contig93.20250.1 ID=prot_S-firma_M_contig93.20250.1|Name=mRNA_S-firma_M_contig93.20250.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=532bp MLLMLAPLTGVGSVVGTNVVLCGGGTSSVGSKLADAISDGASTADLRRCSback to top mRNA from alignment at S-firma_M_contig93:12535..20394+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_M_contig93.20250.1 ID=mRNA_S-firma_M_contig93.20250.1|Name=mRNA_S-firma_M_contig93.20250.1|organism=Sphaerotrichia firma Sfir_13m male|type=mRNA|length=7860bp|location=Sequence derived from alignment at S-firma_M_contig93:12535..20394+ (Sphaerotrichia firma Sfir_13m male)back to top Coding sequence (CDS) from alignment at S-firma_M_contig93:12535..20394+ >mRNA_S-firma_M_contig93.20250.1 ID=mRNA_S-firma_M_contig93.20250.1|Name=mRNA_S-firma_M_contig93.20250.1|organism=Sphaerotrichia firma Sfir_13m male|type=CDS|length=3192bp|location=Sequence derived from alignment at S-firma_M_contig93:12535..20394+ (Sphaerotrichia firma Sfir_13m male)back to top |